Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:16:40 (3106168): wrapper (7.7.26015): starting
10:16:40 (3106168): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:16:40] Arguments: --nthreads 8
[2025-06-03 10:16:40] Threads: 8
[2025-06-03 10:16:40] Checking for CVMFS
[2025-06-03 10:16:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:16:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:16:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:16:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:16:40] 2.12.6.0 3646663 90487 337104 146744 0 193 20810725 32935936 2803 16776704 1 376142948 99.632 367863476 25215 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 10:16:40] CVMFS is ok
[2025-06-03 10:16:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:16:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:16:40] Further information can be found at the LHC@home message board.
[2025-06-03 10:16:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:16:40] Checking for apptainer binary...
[2025-06-03 10:16:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:16:40] Running /usr/bin/apptainer --version
[2025-06-03 10:16:40] apptainer version 1.4.1-1.el9
[2025-06-03 10:16:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:16:40] c-5-2.aglt2.org
[2025-06-03 10:16:40] apptainer works
[2025-06-03 10:16:40] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:16:40] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:16:40] Starting ATLAS job with PandaID=6677620983
[2025-06-03 10:16:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:32:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:32:36]  domain=
[2025-06-03 11:32:36]  filesize=302637
[2025-06-03 11:32:36]  filetype=log
[2025-06-03 11:32:36]  guid=850af994-8915-43ea-a35f-dbca1c680142
[2025-06-03 11:32:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 11:32:36]  is_altstaged=None
[2025-06-03 11:32:36]  is_tar=False
[2025-06-03 11:32:36]  lfn=log.45006595._033277.job.log.tgz.1
[2025-06-03 11:32:36]  mtime=0
[2025-06-03 11:32:36]  protocol_id=None
[2025-06-03 11:32:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 11:32:36]  replicas=None
[2025-06-03 11:32:36]  scope=mc23_13p6TeV
[2025-06-03 11:32:36]  status=None
[2025-06-03 11:32:36]  status_code=0
[2025-06-03 11:32:36]  storage_token=
[2025-06-03 11:32:36]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677620983/log.45006595._033277.job.log.tgz.1
[2025-06-03 11:32:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/5b/log.45006595._033277.job.log.tgz.1
[2025-06-03 11:32:36]  workdir=None
[2025-06-03 11:32:36] ]
[2025-06-03 11:32:36] 2025-06-03 15:32:19,540 | INFO     | transferring file log.45006595._033277.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677620983/log.45006595._033277.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 11:32:36] 2025-06-03 15:32:19,540 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677620983/log.45006595._033277.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._033277.job
[2025-06-03 11:32:36] 2025-06-03 15:32:19,552 | INFO     | adding to output.list: log.45006595._033277.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0e/5b/log.45006595._033277.job.log.tg
[2025-06-03 11:32:36] 2025-06-03 15:32:19,553 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 11:32:36] 2025-06-03 15:32:19,553 | INFO     | summary of transferred files:
[2025-06-03 11:32:36] 2025-06-03 15:32:19,553 | INFO     |  -- lfn=log.45006595._033277.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 11:32:36] 2025-06-03 15:32:19,553 | INFO     | stage-out finished correctly
[2025-06-03 11:32:36] 2025-06-03 15:32:19,616 | INFO     | monitor loop #340: job 0:6677620983 is in state 'finished'
[2025-06-03 11:32:36] 2025-06-03 15:32:19,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:32:36] 2025-06-03 15:32:20,373 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 11:32:36] 2025-06-03 15:32:20,628 | INFO     | job 6677620983 has state=finished
[2025-06-03 11:32:36] 2025-06-03 15:32:20,628 | INFO     | preparing for final server update for job 6677620983 in state='finished'
[2025-06-03 11:32:36] 2025-06-03 15:32:20,629 | INFO     | this job has now completed (state=finished)
[2025-06-03 11:32:36] 2025-06-03 15:32:20,629 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 11:32:36] 2025-06-03 15:32:20,629 | INFO     | log transfer has been attempted: DONE
[2025-06-03 11:32:36] 2025-06-03 15:32:20,629 | INFO     | job 6677620983 has finished - writing final server update
[2025-06-03 11:32:36] 2025-06-03 15:32:20,630 | INFO     | total number of processed events: 400 (read)
[2025-06-03 11:32:36] 2025-06-03 15:32:20,644 | INFO     | executing command: lscpu
[2025-06-03 11:32:36] 2025-06-03 15:32:20,685 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 11:32:36] 2025-06-03 15:32:22,119 | INFO     | monitor loop #341: job 0:6677620983 is in state 'finished'
[2025-06-03 11:32:36] 2025-06-03 15:32:22,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:32:36] 2025-06-03 15:32:23,150 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 11:32:36] 2025-06-03 15:32:23,151 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677620983/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:32:36] 2025-06-03 15:32:23,151 | INFO     | extracted standard info from prmon json
[2025-06-03 11:32:36] 2025-06-03 15:32:23,151 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:32:36] 2025-06-03 15:32:23,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:32:36] 2025-06-03 15:32:23,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:32:36] 2025-06-03 15:32:23,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:32:36] 2025-06-03 15:32:23,153 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:32:36] 2025-06-03 15:32:23,153 | INFO     | sum of square deviations: 93240818.0
[2025-06-03 11:32:36] 2025-06-03 15:32:23,153 | INFO     | sum of deviations: 8038286468.000001
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | mean x: 1748962548.0
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | mean y: 2135547.4776119404
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | -- intersect: -150775842211.43912
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | intersect: -150775842211.43912
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | chi2: 0.7151948251169876
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | -- intersect: -150775842211.43912
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | current memory leak: 86.21 B/s (using 67 data points, chi2=0.72)
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | ..............................
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | . Timing measurements:
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | . get job = 0 s
[2025-06-03 11:32:36] 2025-06-03 15:32:23,154 | INFO     | . initial setup = 2 s
[2025-06-03 11:32:36] 2025-06-03 15:32:23,155 | INFO     | . payload setup = 4 s
[2025-06-03 11:32:36] 2025-06-03 15:32:23,155 | INFO     | . stage-in = 0 s
[2025-06-03 11:32:36] 2025-06-03 15:32:23,155 | INFO     | . payload execution = 4507 s
[2025-06-03 11:32:36] 2025-06-03 15:32:23,155 | INFO     | . stage-out = 0 s
[2025-06-03 11:32:36] 2025-06-03 15:32:23,155 | INFO     | . log creation = 0 s
[2025-06-03 11:32:36] 2025-06-03 15:32:23,155 | INFO     | ..............................
[2025-06-03 11:32:36] 2025-06-03 15:32:23,211 | INFO     | 
[2025-06-03 11:32:36] 2025-06-03 15:32:23,211 | INFO     | job summary report
[2025-06-03 11:32:36] 2025-06-03 15:32:23,211 | INFO     | --------------------------------------------------
[2025-06-03 11:32:36] 2025-06-03 15:32:23,212 | INFO     | PanDA job id: 6677620983
[2025-06-03 11:32:36] 2025-06-03 15:32:23,212 | INFO     | task id: 45006595
[2025-06-03 11:32:36] 2025-06-03 15:32:23,212 | INFO     | errors: (none)
[2025-06-03 11:32:36] 2025-06-03 15:32:23,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:32:36] 2025-06-03 15:32:23,212 | INFO     | pilot state: finished 
[2025-06-03 11:32:36] 2025-06-03 15:32:23,212 | INFO     | transexitcode: 0
[2025-06-03 11:32:36] 2025-06-03 15:32:23,212 | INFO     | exeerrorcode: 0
[2025-06-03 11:32:36] 2025-06-03 15:32:23,212 | INFO     | exeerrordiag: 
[2025-06-03 11:32:36] 2025-06-03 15:32:23,212 | INFO     | exitcode: 0
[2025-06-03 11:32:36] 2025-06-03 15:32:23,213 | INFO     | exitmsg: OK
[2025-06-03 11:32:36] 2025-06-03 15:32:23,213 | INFO     | cpuconsumptiontime: 31017 s
[2025-06-03 11:32:36] 2025-06-03 15:32:23,213 | INFO     | nevents: 400
[2025-06-03 11:32:36] 2025-06-03 15:32:23,213 | INFO     | neventsw: 0
[2025-06-03 11:32:36] 2025-06-03 15:32:23,213 | INFO     | pid: 3116537
[2025-06-03 11:32:36] 2025-06-03 15:32:23,213 | INFO     | pgrp: 3116537
[2025-06-03 11:32:36] 2025-06-03 15:32:23,213 | INFO     | corecount: 8
[2025-06-03 11:32:36] 2025-06-03 15:32:23,213 | INFO     | event service: False
[2025-06-03 11:32:36] 2025-06-03 15:32:23,213 | INFO     | sizes: {0: 2405013, 1: 2405212, 3: 2405418, 11: 2405446, 4516: 2431530, 4517: 2440471, 4518: 2440655, 4521: 2440825}
[2025-06-03 11:32:36] 2025-06-03 15:32:23,214 | INFO     | --------------------------------------------------
[2025-06-03 11:32:36] 2025-06-03 15:32:23,214 | INFO     | 
[2025-06-03 11:32:36] 2025-06-03 15:32:23,214 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 11:32:36] 2025-06-03 15:32:23,225 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,226 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,226 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,226 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,226 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,226 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,226 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,226 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:32:36] 2025-06-03 15:32:23,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,228 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:32:36] 2025-06-03 15:32:23,228 | INFO     | job 6677620983 has completed (purged errors)
[2025-06-03 11:32:36] 2025-06-03 15:32:23,228 | INFO     | overall cleanup function is called
[2025-06-03 11:32:36] 2025-06-03 15:32:24,236 | INFO     | --- collectZombieJob: --- 10, [3116537]
[2025-06-03 11:32:36] 2025-06-03 15:32:24,236 | INFO     | zombie collector waiting for pid 3116537
[2025-06-03 11:32:36] 2025-06-03 15:32:24,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:32:36] 2025-06-03 15:32:24,236 | INFO     | collected zombie processes
[2025-06-03 11:32:36] 2025-06-03 15:32:24,236 | INFO     | will attempt to kill all subprocesses of pid=3116537
[2025-06-03 11:32:36] 2025-06-03 15:32:24,419 | INFO     | process IDs to be killed: [3116537] (in reverse order)
[2025-06-03 11:32:36] 2025-06-03 15:32:24,461 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:32:36] 2025-06-03 15:32:24,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:32:36] 2025-06-03 15:32:24,465 | INFO     | did not find any defunct processes belonging to 3116537
[2025-06-03 11:32:36] 2025-06-03 15:32:24,469 | INFO     | did not find any defunct processes belonging to 3116537
[2025-06-03 11:32:36] 2025-06-03 15:32:24,469 | INFO     | ready for new job
[2025-06-03 11:32:36] 2025-06-03 15:32:24,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:32:36] 2025-06-03 15:32:24,470 | INFO     | **************************************
[2025-06-03 11:32:36] 2025-06-03 15:32:24,470 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:32:36] 2025-06-03 15:32:24,470 | INFO     | **************************************
[2025-06-03 11:32:36] 2025-06-03 15:32:24,470 | INFO     | 
[2025-06-03 11:32:36] 2025-06-03 15:32:24,483 | INFO     | architecture information:
[2025-06-03 11:32:36] 2025-06-03 15:32:24,483 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:32:36] 2025-06-03 15:32:24,490 | INFO     | cat /etc/os-release:
[2025-06-03 11:32:36] NAME="CentOS Linux"
[2025-06-03 11:32:36] VERSION="7 (Core)"
[2025-06-03 11:32:36] ID="centos"
[2025-06-03 11:32:36] ID_LIKE="rhel fedora"
[2025-06-03 11:32:36] VERSION_ID="7"
[2025-06-03 11:32:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:32:36] ANSI_COLOR="0;31"
[2025-06-03 11:32:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:32:36] HOME_URL="https://www.centos.org/"
[2025-06-03 11:32:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:32:36] 
[2025-06-03 11:32:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:32:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:32:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:32:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:32:36] 
[2025-06-03 11:32:36] 2025-06-03 15:32:24,490 | INFO     | **************************************
[2025-06-03 11:32:36] 2025-06-03 15:32:24,993 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 11:32:36] 2025-06-03 15:32:25,003 | INFO     | sufficient remaining disk space (74622959616 B)
[2025-06-03 11:32:36] 2025-06-03 15:32:25,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:32:36] 2025-06-03 15:32:25,003 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:32:36] 2025-06-03 15:32:25,003 | INFO     | update_server=False
[2025-06-03 11:32:36] 2025-06-03 15:32:25,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:32:36] 2025-06-03 15:32:25,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:32:36] 2025-06-03 15:32:25,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:32:36] 2025-06-03 15:32:25,253 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:32:36] 2025-06-03 15:32:25,254 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:32:36] 2025-06-03 15:32:25,254 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:32:36] 2025-06-03 15:32:25,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:32:36] 2025-06-03 15:32:25,623 | INFO     | aborting loop
[2025-06-03 11:32:36] 2025-06-03 15:32:25,716 | INFO     | all data control threads have been joined
[2025-06-03 11:32:36] 2025-06-03 15:32:25,973 | INFO     | all payload control threads have been joined
[2025-06-03 11:32:36] 2025-06-03 15:32:26,009 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:26,009 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:26,356 | INFO     | all job control threads have been joined
[2025-06-03 11:32:36] 2025-06-03 15:32:26,416 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:26,482 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:32:36] 2025-06-03 15:32:26,628 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:26,722 | INFO     | [data] control thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:26,938 | INFO     | [job] validate thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:26,961 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:26,979 | INFO     | [payload] control thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:27,041 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:27,101 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:27,121 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:27,147 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:27,174 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:27,288 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:27,362 | INFO     | [job] control thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:30,488 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:32:36] 2025-06-03 15:32:31,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140059638441792)>', '<ExcThread(monitor, started 140058866734848)>']
[2025-06-03 11:32:36] 2025-06-03 15:32:31,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:32:36] 2025-06-03 15:32:31,285 | INFO     | [monitor] control thread has ended
[2025-06-03 11:32:36] 2025-06-03 15:32:36,256 | INFO     | all workflow threads have been joined
[2025-06-03 11:32:36] 2025-06-03 15:32:36,256 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:32:36] 2025-06-03 15:32:36,257 | INFO     | traces error code: 0
[2025-06-03 11:32:36] 2025-06-03 15:32:36,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:32:36] 2025-06-03 15:32:36,326 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:32:36] 2025-06-03 15:32:36,328 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:32:36] 2025-06-03 15:32:36,330 [wrapper] pilotpid: 3109912
[2025-06-03 11:32:36] 2025-06-03 15:32:36,332 [wrapper] Pilot exit status: 0
[2025-06-03 11:32:36] 2025-06-03 15:32:36,338 [wrapper] pandaids: 6677620983
[2025-06-03 11:32:36] 2025-06-03 15:32:36,383 [wrapper] cleanup supervisor_pilot 3276798 3109913
[2025-06-03 11:32:36] 2025-06-03 15:32:36,385 [wrapper] Test setup, not cleaning
[2025-06-03 11:32:36] 2025-06-03 15:32:36,387 [wrapper] apfmon messages muted
[2025-06-03 11:32:36] 2025-06-03 15:32:36,388 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:32:36] 2025-06-03 15:32:36,390 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:32:36]  *** Error codes and diagnostics ***
[2025-06-03 11:32:36]     "exeErrorCode": 0,
[2025-06-03 11:32:36]     "exeErrorDiag": "",
[2025-06-03 11:32:36]     "pilotErrorCode": 0,
[2025-06-03 11:32:36]     "pilotErrorDiag": "",
[2025-06-03 11:32:36]  *** Listing of results directory ***
[2025-06-03 11:32:36] total 388500
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 08:59 pilot3.tar.gz
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 09:05 queuedata.json
[2025-06-03 11:32:36] -rwx------. 1 boincer umatlas     37140 Jun  3 09:05 runpilot2-wrapper.sh
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas       100 Jun  3 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:32:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 10:16 run_atlas
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas       105 Jun  3 10:16 job.xml
[2025-06-03 11:32:36] -rw-r--r--. 2 boincer umatlas 217100333 Jun  3 10:16 EVNT.45006593._001339.pool.root.1
[2025-06-03 11:32:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:16 start_atlas.sh
[2025-06-03 11:32:36] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 10:16 shared
[2025-06-03 11:32:36] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 10:16 input.tar.gz
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas         0 Jun  3 10:16 boinc_lockfile
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 10:16 pandaJob.out
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas    982724 Jun  3 10:16 agis_schedconf.cvmfs.json
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas   1603667 Jun  3 10:16 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:32:36] drwx------. 4 boincer umatlas      4096 Jun  3 10:16 pilot3
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 11:31 init_data.xml
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas       529 Jun  3 11:31 boinc_task_state.xml
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas 175386707 Jun  3 11:31 HITS.45006595._033277.pool.root.1
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas        95 Jun  3 11:32 pilot_heartbeat.json
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas      1046 Jun  3 11:32 memory_monitor_summary.json
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas    302637 Jun  3 11:32 log.45006595._033277.job.log.tgz.1
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas      7704 Jun  3 11:32 heartbeat.json
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas        27 Jun  3 11:32 wrapper_checkpoint.txt
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 11:32 boinc_mmap_file
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas      4353 Jun  3 11:32 pilotlog.txt
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas    450988 Jun  3 11:32 log.45006595._033277.job.log.1
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas       357 Jun  3 11:32 output.list
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas       620 Jun  3 11:32 runtime_log
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas    768000 Jun  3 11:32 result.tar.gz
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 11:32 runtime_log.err
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas       647 Jun  3 11:32 9aZNDmbVgg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdFkKDmk63VIo.diag
[2025-06-03 11:32:36] -rw-r--r--. 1 boincer umatlas     21053 Jun  3 11:32 stderr.txt
[2025-06-03 11:32:36] HITS file was successfully produced:
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas 175386707 Jun  3 11:31 shared/HITS.pool.root.1
[2025-06-03 11:32:36]  *** Contents of shared directory: ***
[2025-06-03 11:32:36] total 384568
[2025-06-03 11:32:36] -rw-r--r--. 2 boincer umatlas 217100333 Jun  3 10:16 ATLAS.root_0
[2025-06-03 11:32:36] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:16 start_atlas.sh
[2025-06-03 11:32:36] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 10:16 input.tar.gz
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas 175386707 Jun  3 11:31 HITS.pool.root.1
[2025-06-03 11:32:36] -rw-------. 1 boincer umatlas    768000 Jun  3 11:32 result.tar.gz
11:32:37 (3106168): run_atlas exited; CPU time 31136.193044
11:32:37 (3106168): called boinc_finish(0)

</stderr_txt>
]]>

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