Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:10:12 (26206): wrapper (7.7.26015): starting
10:10:12 (26206): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:10:12] Arguments: --nthreads 8
[2025-06-03 10:10:12] Threads: 8
[2025-06-03 10:10:12] Checking for CVMFS
[2025-06-03 10:10:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:10:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:10:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:10:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:10:13] 2.11.2.0 2891 34344 73352 146744 2 56 17585134 20275201 1 130560 0 10448322 99.975 6075807 7453 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 10:10:13] CVMFS is ok
[2025-06-03 10:10:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:10:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:10:13] Further information can be found at the LHC@home message board.
[2025-06-03 10:10:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:10:13] Checking for apptainer binary...
[2025-06-03 10:10:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:10:13] Running /usr/bin/apptainer --version
[2025-06-03 10:10:13] apptainer version 1.3.2-1.el7
[2025-06-03 10:10:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:10:14] c-115-14.aglt2.org
[2025-06-03 10:10:14] apptainer works
[2025-06-03 10:10:14] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:10:14] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:10:14] Starting ATLAS job with PandaID=6677578692
[2025-06-03 10:10:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:51:04]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:51:04]  mtime=0
[2025-06-03 11:51:04]  protocol_id=None
[2025-06-03 11:51:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 11:51:04]  replicas=None
[2025-06-03 11:51:04]  scope=mc23_13p6TeV
[2025-06-03 11:51:04]  status=None
[2025-06-03 11:51:04]  status_code=0
[2025-06-03 11:51:04]  storage_token=
[2025-06-03 11:51:04]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677578692/log.45006595._029651.job.log.tgz.1
[2025-06-03 11:51:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/37/log.45006595._029651.job.log.tgz.1
[2025-06-03 11:51:04]  workdir=None
[2025-06-03 11:51:04] ]
[2025-06-03 11:51:04] 2025-06-03 15:50:40,832 | INFO     | transferring file log.45006595._029651.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677578692/log.45006595._029651.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 11:51:04] 2025-06-03 15:50:40,832 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677578692/log.45006595._029651.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._029651.job
[2025-06-03 11:51:04] 2025-06-03 15:50:40,855 | INFO     | adding to output.list: log.45006595._029651.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fa/37/log.45006595._029651.job.log.tg
[2025-06-03 11:51:04] 2025-06-03 15:50:40,857 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 11:51:04] 2025-06-03 15:50:40,857 | INFO     | summary of transferred files:
[2025-06-03 11:51:04] 2025-06-03 15:50:40,857 | INFO     |  -- lfn=log.45006595._029651.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 11:51:04] 2025-06-03 15:50:40,857 | INFO     | stage-out finished correctly
[2025-06-03 11:51:04] 2025-06-03 15:50:44,061 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 11:51:04] 2025-06-03 15:50:44,727 | WARNING  | process 4020 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 11:51:04] 2025-06-03 15:50:44,727 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677578692/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:51:04] 2025-06-03 15:50:44,769 | INFO     | job 6677578692 has state=finished
[2025-06-03 11:51:04] 2025-06-03 15:50:44,769 | INFO     | preparing for final server update for job 6677578692 in state='finished'
[2025-06-03 11:51:04] 2025-06-03 15:50:44,771 | INFO     | this job has now completed (state=finished)
[2025-06-03 11:51:04] 2025-06-03 15:50:44,771 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 11:51:04] 2025-06-03 15:50:44,771 | INFO     | log transfer has been attempted: DONE
[2025-06-03 11:51:04] 2025-06-03 15:50:44,772 | INFO     | job 6677578692 has finished - writing final server update
[2025-06-03 11:51:04] 2025-06-03 15:50:44,772 | INFO     | total number of processed events: 400 (read)
[2025-06-03 11:51:04] 2025-06-03 15:50:44,774 | INFO     | executing command: lscpu
[2025-06-03 11:51:04] 2025-06-03 15:50:44,804 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 11:51:04] 2025-06-03 15:50:44,833 | INFO     | number of running child processes to parent process 4020: 1
[2025-06-03 11:51:04] 2025-06-03 15:50:44,833 | INFO     | maximum number of monitored processes: 6
[2025-06-03 11:51:04] 2025-06-03 15:50:47,337 | INFO     | monitor loop #445: job 0:6677578692 is in state 'finished'
[2025-06-03 11:51:04] 2025-06-03 15:50:47,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:51:04] 2025-06-03 15:50:49,524 | INFO     | PID=29880 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 11:51:04] 2025-06-03 15:50:49,840 | INFO     | monitor loop #446: job 0:6677578692 is in state 'finished'
[2025-06-03 11:51:04] 2025-06-03 15:50:49,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:51:04] 2025-06-03 15:50:50,317 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 11:51:04] 2025-06-03 15:50:50,317 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677578692/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:51:04] 2025-06-03 15:50:50,318 | INFO     | extracted standard info from prmon json
[2025-06-03 11:51:04] 2025-06-03 15:50:50,318 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:51:04] 2025-06-03 15:50:50,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:51:04] 2025-06-03 15:50:50,319 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:51:04] 2025-06-03 15:50:50,319 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:51:04] 2025-06-03 15:50:50,323 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:51:04] 2025-06-03 15:50:50,323 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 11:51:04] 2025-06-03 15:50:50,324 | INFO     | sum of deviations: -6154002811.999999
[2025-06-03 11:51:04] 2025-06-03 15:50:50,324 | INFO     | mean x: 1748962912.0
[2025-06-03 11:51:04] 2025-06-03 15:50:50,324 | INFO     | mean y: 2525789.4835164836
[2025-06-03 11:51:04] 2025-06-03 15:50:50,324 | INFO     | -- intersect: 46069335549.38844
[2025-06-03 11:51:04] 2025-06-03 15:50:50,325 | INFO     | intersect: 46069335549.38844
[2025-06-03 11:51:04] 2025-06-03 15:50:50,325 | INFO     | chi2: 0.08904238350243729
[2025-06-03 11:51:04] 2025-06-03 15:50:50,325 | INFO     | -- intersect: 46069335549.38844
[2025-06-03 11:51:04] 2025-06-03 15:50:50,325 | INFO     | current memory leak: -26.34 B/s (using 91 data points, chi2=0.09)
[2025-06-03 11:51:04] 2025-06-03 15:50:50,326 | INFO     | ..............................
[2025-06-03 11:51:04] 2025-06-03 15:50:50,326 | INFO     | . Timing measurements:
[2025-06-03 11:51:04] 2025-06-03 15:50:50,326 | INFO     | . get job = 0 s
[2025-06-03 11:51:04] 2025-06-03 15:50:50,326 | INFO     | . initial setup = 2 s
[2025-06-03 11:51:04] 2025-06-03 15:50:50,327 | INFO     | . payload setup = 11 s
[2025-06-03 11:51:04] 2025-06-03 15:50:50,327 | INFO     | . stage-in = 0 s
[2025-06-03 11:51:04] 2025-06-03 15:50:50,327 | INFO     | . payload execution = 5979 s
[2025-06-03 11:51:04] 2025-06-03 15:50:50,327 | INFO     | . stage-out = 0 s
[2025-06-03 11:51:04] 2025-06-03 15:50:50,327 | INFO     | . log creation = 0 s
[2025-06-03 11:51:04] 2025-06-03 15:50:50,327 | INFO     | ..............................
[2025-06-03 11:51:04] 2025-06-03 15:50:50,534 | INFO     | 
[2025-06-03 11:51:04] 2025-06-03 15:50:50,534 | INFO     | job summary report
[2025-06-03 11:51:04] 2025-06-03 15:50:50,534 | INFO     | --------------------------------------------------
[2025-06-03 11:51:04] 2025-06-03 15:50:50,534 | INFO     | PanDA job id: 6677578692
[2025-06-03 11:51:04] 2025-06-03 15:50:50,534 | INFO     | task id: 45006595
[2025-06-03 11:51:04] 2025-06-03 15:50:50,535 | INFO     | errors: (none)
[2025-06-03 11:51:04] 2025-06-03 15:50:50,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:51:04] 2025-06-03 15:50:50,535 | INFO     | pilot state: finished 
[2025-06-03 11:51:04] 2025-06-03 15:50:50,535 | INFO     | transexitcode: 0
[2025-06-03 11:51:04] 2025-06-03 15:50:50,535 | INFO     | exeerrorcode: 0
[2025-06-03 11:51:04] 2025-06-03 15:50:50,535 | INFO     | exeerrordiag: 
[2025-06-03 11:51:04] 2025-06-03 15:50:50,536 | INFO     | exitcode: 0
[2025-06-03 11:51:04] 2025-06-03 15:50:50,536 | INFO     | exitmsg: OK
[2025-06-03 11:51:04] 2025-06-03 15:50:50,536 | INFO     | cpuconsumptiontime: 44500 s
[2025-06-03 11:51:04] 2025-06-03 15:50:50,536 | INFO     | nevents: 400
[2025-06-03 11:51:04] 2025-06-03 15:50:50,536 | INFO     | neventsw: 0
[2025-06-03 11:51:04] 2025-06-03 15:50:50,536 | INFO     | pid: 4020
[2025-06-03 11:51:04] 2025-06-03 15:50:50,537 | INFO     | pgrp: 4020
[2025-06-03 11:51:04] 2025-06-03 15:50:50,537 | INFO     | corecount: 8
[2025-06-03 11:51:04] 2025-06-03 15:50:50,537 | INFO     | event service: False
[2025-06-03 11:51:04] 2025-06-03 15:50:50,537 | INFO     | sizes: {0: 2405182, 6: 2405388, 11: 2405416, 5994: 2431991, 5995: 2440932, 5998: 2440988, 6005: 2441286}
[2025-06-03 11:51:04] 2025-06-03 15:50:50,537 | INFO     | --------------------------------------------------
[2025-06-03 11:51:04] 2025-06-03 15:50:50,537 | INFO     | 
[2025-06-03 11:51:04] 2025-06-03 15:50:50,538 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 11:51:04] 2025-06-03 15:50:50,563 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,564 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,564 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,564 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,564 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,565 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:51:04] 2025-06-03 15:50:50,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,567 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:51:04] 2025-06-03 15:50:50,568 | INFO     | job 6677578692 has completed (purged errors)
[2025-06-03 11:51:04] 2025-06-03 15:50:50,568 | INFO     | overall cleanup function is called
[2025-06-03 11:51:04] 2025-06-03 15:50:51,573 | INFO     | --- collectZombieJob: --- 10, [4020]
[2025-06-03 11:51:04] 2025-06-03 15:50:51,573 | INFO     | zombie collector waiting for pid 4020
[2025-06-03 11:51:04] 2025-06-03 15:50:51,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:51:04] 2025-06-03 15:50:51,573 | INFO     | collected zombie processes
[2025-06-03 11:51:04] 2025-06-03 15:50:51,573 | INFO     | will attempt to kill all subprocesses of pid=4020
[2025-06-03 11:51:04] 2025-06-03 15:50:51,655 | INFO     | process IDs to be killed: [4020] (in reverse order)
[2025-06-03 11:51:04] 2025-06-03 15:50:51,709 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:51:04] 2025-06-03 15:50:51,710 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:51:04] 2025-06-03 15:50:51,714 | INFO     | did not find any defunct processes belonging to 4020
[2025-06-03 11:51:04] 2025-06-03 15:50:51,718 | INFO     | did not find any defunct processes belonging to 4020
[2025-06-03 11:51:04] 2025-06-03 15:50:51,718 | INFO     | ready for new job
[2025-06-03 11:51:04] 2025-06-03 15:50:51,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:51:04] 2025-06-03 15:50:51,720 | INFO     | **************************************
[2025-06-03 11:51:04] 2025-06-03 15:50:51,720 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:51:04] 2025-06-03 15:50:51,720 | INFO     | **************************************
[2025-06-03 11:51:04] 2025-06-03 15:50:51,720 | INFO     | 
[2025-06-03 11:51:04] 2025-06-03 15:50:51,720 | INFO     | architecture information:
[2025-06-03 11:51:04] 2025-06-03 15:50:51,721 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:51:04] 2025-06-03 15:50:51,741 | INFO     | cat /etc/os-release:
[2025-06-03 11:51:04] NAME="CentOS Linux"
[2025-06-03 11:51:04] VERSION="7 (Core)"
[2025-06-03 11:51:04] ID="centos"
[2025-06-03 11:51:04] ID_LIKE="rhel fedora"
[2025-06-03 11:51:04] VERSION_ID="7"
[2025-06-03 11:51:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:51:04] ANSI_COLOR="0;31"
[2025-06-03 11:51:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:51:04] HOME_URL="https://www.centos.org/"
[2025-06-03 11:51:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:51:04] 
[2025-06-03 11:51:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:51:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:51:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:51:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:51:04] 
[2025-06-03 11:51:04] 2025-06-03 15:50:51,741 | INFO     | **************************************
[2025-06-03 11:51:04] 2025-06-03 15:50:52,244 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 11:51:04] 2025-06-03 15:50:52,264 | INFO     | sufficient remaining disk space (18643681280 B)
[2025-06-03 11:51:04] 2025-06-03 15:50:52,265 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:51:04] 2025-06-03 15:50:52,265 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:51:04] 2025-06-03 15:50:52,265 | INFO     | update_server=False
[2025-06-03 11:51:04] 2025-06-03 15:50:52,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:51:04] 2025-06-03 15:50:52,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:51:04] 2025-06-03 15:50:52,267 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:51:04] 2025-06-03 15:50:52,267 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 11:51:04] 2025-06-03 15:50:52,268 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:51:04] 2025-06-03 15:50:52,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:51:04] 2025-06-03 15:50:52,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:51:04] 2025-06-03 15:50:52,344 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 11:51:04] 2025-06-03 15:50:52,344 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 11:51:04] 2025-06-03 15:50:52,344 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:51:04] 2025-06-03 15:50:52,344 | INFO     | will abort loop
[2025-06-03 11:51:04] 2025-06-03 15:50:52,869 | INFO     | all job control threads have been joined
[2025-06-03 11:51:04] 2025-06-03 15:50:52,936 | INFO     | all data control threads have been joined
[2025-06-03 11:51:04] 2025-06-03 15:50:53,138 | INFO     | all payload control threads have been joined
[2025-06-03 11:51:04] 2025-06-03 15:50:53,271 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,271 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,350 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,369 | INFO     | [job] validate thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,371 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,589 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,590 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,875 | INFO     | [job] control thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,897 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:53,941 | INFO     | [data] control thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:54,143 | INFO     | [payload] control thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:54,272 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:54,422 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:54,515 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:54,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:51:04] 2025-06-03 15:50:58,653 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:51:04] 2025-06-03 15:50:59,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139892993156928)>', '<ExcThread(monitor, started 139892025706240)>']
[2025-06-03 11:51:04] 2025-06-03 15:50:59,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:51:04] 2025-06-03 15:50:59,302 | INFO     | [monitor] control thread has ended
[2025-06-03 11:51:04] 2025-06-03 15:51:04,270 | INFO     | all workflow threads have been joined
[2025-06-03 11:51:04] 2025-06-03 15:51:04,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:51:04] 2025-06-03 15:51:04,271 | INFO     | traces error code: 0
[2025-06-03 11:51:04] 2025-06-03 15:51:04,274 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:51:04] 2025-06-03 15:51:04,395 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:51:04] 2025-06-03 15:51:04,400 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:51:04] 2025-06-03 15:51:04,405 [wrapper] pilotpid: 29880
[2025-06-03 11:51:04] 2025-06-03 15:51:04,409 [wrapper] Pilot exit status: 0
[2025-06-03 11:51:04] 2025-06-03 15:51:04,427 [wrapper] pandaids: 6677578692
[2025-06-03 11:51:04] 2025-06-03 15:51:04,468 [wrapper] cleanup supervisor_pilot 25850 29881
[2025-06-03 11:51:04] 2025-06-03 15:51:04,472 [wrapper] Test setup, not cleaning
[2025-06-03 11:51:04] 2025-06-03 15:51:04,477 [wrapper] apfmon messages muted
[2025-06-03 11:51:04] 2025-06-03 15:51:04,482 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:51:04] 2025-06-03 15:51:04,487 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:51:04]  *** Error codes and diagnostics ***
[2025-06-03 11:51:04]     "exeErrorCode": 0,
[2025-06-03 11:51:04]     "exeErrorDiag": "",
[2025-06-03 11:51:04]     "pilotErrorCode": 0,
[2025-06-03 11:51:04]     "pilotErrorDiag": "",
[2025-06-03 11:51:04]  *** Listing of results directory ***
[2025-06-03 11:51:04] total 388624
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 06:57 pilot3.tar.gz
[2025-06-03 11:51:04] -rwx------ 1 boincer umatlas     37140 Jun  3 07:00 runpilot2-wrapper.sh
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 07:00 queuedata.json
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas       100 Jun  3 10:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:51:04] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 10:10 run_atlas
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas       105 Jun  3 10:10 job.xml
[2025-06-03 11:51:04] -rw-r--r-- 2 boincer umatlas 214274367 Jun  3 10:10 EVNT.45006593._001186.pool.root.1
[2025-06-03 11:51:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:10 start_atlas.sh
[2025-06-03 11:51:04] drwxrwx--x 2 boincer umatlas      4096 Jun  3 10:10 shared
[2025-06-03 11:51:04] -rw-r--r-- 2 boincer umatlas    508871 Jun  3 10:10 input.tar.gz
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas         0 Jun  3 10:10 boinc_lockfile
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 10:10 pandaJob.out
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas    982724 Jun  3 10:10 agis_schedconf.cvmfs.json
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas   1603667 Jun  3 10:10 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:51:04] drwx------ 4 boincer umatlas      4096 Jun  3 10:10 pilot3
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas      5824 Jun  3 11:47 init_data.xml
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas 178121721 Jun  3 11:50 HITS.45006595._029651.pool.root.1
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas       530 Jun  3 11:50 boinc_task_state.xml
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas      1050 Jun  3 11:50 memory_monitor_summary.json
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas    303466 Jun  3 11:50 log.45006595._029651.job.log.tgz.1
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas        95 Jun  3 11:50 pilot_heartbeat.json
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas      7741 Jun  3 11:50 heartbeat.json
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 11:51 boinc_mmap_file
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas        27 Jun  3 11:51 wrapper_checkpoint.txt
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas      4662 Jun  3 11:51 pilotlog.txt
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas    557674 Jun  3 11:51 log.45006595._029651.job.log.1
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas       357 Jun  3 11:51 output.list
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas       620 Jun  3 11:51 runtime_log
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas    880640 Jun  3 11:51 result.tar.gz
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 11:51 runtime_log.err
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas       658 Jun  3 11:51 F4FLDm4Yeg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmONYKDmjarZbn.diag
[2025-06-03 11:51:04] -rw-r--r-- 1 boincer umatlas     21721 Jun  3 11:51 stderr.txt
[2025-06-03 11:51:04] HITS file was successfully produced:
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas 178121721 Jun  3 11:50 shared/HITS.pool.root.1
[2025-06-03 11:51:04]  *** Contents of shared directory: ***
[2025-06-03 11:51:04] total 384584
[2025-06-03 11:51:04] -rw-r--r-- 2 boincer umatlas 214274367 Jun  3 10:10 ATLAS.root_0
[2025-06-03 11:51:04] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 10:10 start_atlas.sh
[2025-06-03 11:51:04] -rw-r--r-- 2 boincer umatlas    508871 Jun  3 10:10 input.tar.gz
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas 178121721 Jun  3 11:50 HITS.pool.root.1
[2025-06-03 11:51:04] -rw------- 1 boincer umatlas    880640 Jun  3 11:51 result.tar.gz
11:51:05 (26206): run_atlas exited; CPU time 44455.458032
11:51:05 (26206): called boinc_finish(0)

</stderr_txt>
]]>

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