Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:06:12 (18301): wrapper (7.7.26015): starting
02:06:12 (18301): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:06:12] Arguments: --nthreads 8
[2025-06-04 02:06:12] Threads: 8
[2025-06-04 02:06:12] Checking for CVMFS
[2025-06-04 02:06:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:06:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:06:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:06:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:06:14] 2.11.2.0 31576 32466 99940 146761 0 16 19901102 25165824 4287 130560 0 16730786 99.822 18701697 2056 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 02:06:14] CVMFS is ok
[2025-06-04 02:06:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:06:14] Checking for apptainer binary...
[2025-06-04 02:06:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:06:14] Running /usr/bin/apptainer --version
[2025-06-04 02:06:15] apptainer version 1.3.2-1.el7
[2025-06-04 02:06:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:36:49] cg-vwn347.simple-grid.lan
[2025-06-04 02:36:49] apptainer works
[2025-06-04 02:36:50] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:36:50] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:36:50] Starting ATLAS job with PandaID=6677581062
[2025-06-04 02:36:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:42:34]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:42:35] 2025-06-04 04:28:38,189 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 06:42:35] 2025-06-04 04:28:38,189 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 06:42:35] 2025-06-04 04:28:38,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 06:42:35] 2025-06-04 04:28:38,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:42:35] 2025-06-04 04:28:38,195 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:42:35] 2025-06-04 04:28:38,195 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,197 | INFO     | sum of deviations: 10811662570.000008
[2025-06-04 06:42:35] 2025-06-04 04:28:38,197 | INFO     | mean x: 1749004632.0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,197 | INFO     | mean y: 2486162.7395348838
[2025-06-04 06:42:35] 2025-06-04 04:28:38,197 | INFO     | -- intersect: -6133707167.121717
[2025-06-04 06:42:35] 2025-06-04 04:28:38,197 | INFO     | intersect: -6133707167.121717
[2025-06-04 06:42:35] 2025-06-04 04:28:38,198 | INFO     | chi2: 5.688199872446343
[2025-06-04 06:42:35] 2025-06-04 04:28:38,198 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 06:42:35] 2025-06-04 04:28:38,200 | INFO     | sum of deviations: 25099734934.5
[2025-06-04 06:42:35] 2025-06-04 04:28:38,200 | INFO     | mean x: 1749004479.5
[2025-06-04 06:42:35] 2025-06-04 04:28:38,200 | INFO     | mean y: 2496342.2714285715
[2025-06-04 06:42:35] 2025-06-04 04:28:38,200 | INFO     | -- intersect: -15284902517.960358
[2025-06-04 06:42:35] 2025-06-04 04:28:38,200 | INFO     | intersect: -15284902517.960358
[2025-06-04 06:42:35] 2025-06-04 04:28:38,201 | INFO     | chi2: 4.966986044626388
[2025-06-04 06:42:35] 2025-06-04 04:28:38,201 | INFO     | current chi2=4.966986044626388 (change=12.67912246391897 %)
[2025-06-04 06:42:35] 2025-06-04 04:28:38,201 | INFO     | right removable region: 209
[2025-06-04 06:42:35] 2025-06-04 04:28:38,201 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 06:42:35] 2025-06-04 04:28:38,203 | INFO     | sum of deviations: -60493627288.000015
[2025-06-04 06:42:35] 2025-06-04 04:28:38,203 | INFO     | mean x: 1749004784.5
[2025-06-04 06:42:35] 2025-06-04 04:28:38,203 | INFO     | mean y: 2537832.838095238
[2025-06-04 06:42:35] 2025-06-04 04:28:38,203 | INFO     | -- intersect: 36847164779.56261
[2025-06-04 06:42:35] 2025-06-04 04:28:38,204 | INFO     | intersect: 36847164779.56261
[2025-06-04 06:42:35] 2025-06-04 04:28:38,204 | INFO     | chi2: 1.3714087424437114
[2025-06-04 06:42:35] 2025-06-04 04:28:38,204 | INFO     | current chi2=1.3714087424437114 (change=75.89028562292933 %)
[2025-06-04 06:42:35] 2025-06-04 04:28:38,204 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,206 | INFO     | sum of deviations: -75519239032.0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,206 | INFO     | mean x: 1749004937.0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,206 | INFO     | mean y: 2549158.5170731707
[2025-06-04 06:42:35] 2025-06-04 04:28:38,206 | INFO     | -- intersect: 49447160526.86021
[2025-06-04 06:42:35] 2025-06-04 04:28:38,207 | INFO     | intersect: 49447160526.86021
[2025-06-04 06:42:35] 2025-06-04 04:28:38,207 | INFO     | chi2: 1.0067811972467167
[2025-06-04 06:42:35] 2025-06-04 04:28:38,207 | INFO     | current chi2=1.0067811972467167 (change=26.587809594043083 %)
[2025-06-04 06:42:35] 2025-06-04 04:28:38,207 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,209 | INFO     | sum of deviations: -72436069672.0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,209 | INFO     | mean x: 1749005089.5
[2025-06-04 06:42:35] 2025-06-04 04:28:38,209 | INFO     | mean y: 2546662.42
[2025-06-04 06:42:35] 2025-06-04 04:28:38,209 | INFO     | -- intersect: 51075197243.68235
[2025-06-04 06:42:35] 2025-06-04 04:28:38,209 | INFO     | intersect: 51075197243.68235
[2025-06-04 06:42:35] 2025-06-04 04:28:38,210 | INFO     | chi2: 0.996156289209156
[2025-06-04 06:42:35] 2025-06-04 04:28:38,210 | INFO     | current chi2=0.996156289209156 (change=1.0553343732100888 %)
[2025-06-04 06:42:35] 2025-06-04 04:28:38,210 | INFO     | left removable region: 30
[2025-06-04 06:42:35] 2025-06-04 04:28:38,210 | INFO     | sum of square deviations: 1778377530.0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,212 | INFO     | sum of deviations: -39863960183.999985
[2025-06-04 06:42:35] 2025-06-04 04:28:38,212 | INFO     | mean x: 1749005364.0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,212 | INFO     | mean y: 2543308.162011173
[2025-06-04 06:42:35] 2025-06-04 04:28:38,212 | INFO     | -- intersect: 39208099505.27523
[2025-06-04 06:42:35] 2025-06-04 04:28:38,212 | INFO     | intersect: 39208099505.27523
[2025-06-04 06:42:35] 2025-06-04 04:28:38,212 | INFO     | chi2: 0.1888141003809928
[2025-06-04 06:42:35] 2025-06-04 04:28:38,213 | INFO     | -- intersect: 39208099505.27523
[2025-06-04 06:42:35] 2025-06-04 04:28:38,213 | INFO     | current memory leak: -22.42 B/s (using 179 data points, chi2=0.19)
[2025-06-04 06:42:35] 2025-06-04 04:28:38,213 | INFO     | ..............................
[2025-06-04 06:42:35] 2025-06-04 04:28:38,214 | INFO     | . Timing measurements:
[2025-06-04 06:42:35] 2025-06-04 04:28:38,214 | INFO     | . get job = 0 s
[2025-06-04 06:42:35] 2025-06-04 04:28:38,214 | INFO     | . initial setup = 10 s
[2025-06-04 06:42:35] 2025-06-04 04:28:38,214 | INFO     | . payload setup = 156 s
[2025-06-04 06:42:35] 2025-06-04 04:28:38,214 | INFO     | . stage-in = 0 s
[2025-06-04 06:42:35] 2025-06-04 04:28:38,214 | INFO     | . payload execution = 13265 s
[2025-06-04 06:42:35] 2025-06-04 04:28:38,214 | INFO     | . stage-out = 7 s
[2025-06-04 06:42:35] 2025-06-04 04:28:38,214 | INFO     | . log creation = 1 s
[2025-06-04 06:42:35] 2025-06-04 04:28:38,214 | INFO     | ..............................
[2025-06-04 06:42:35] 2025-06-04 04:28:38,340 | INFO     | 
[2025-06-04 06:42:35] 2025-06-04 04:28:38,340 | INFO     | job summary report
[2025-06-04 06:42:35] 2025-06-04 04:28:38,340 | INFO     | --------------------------------------------------
[2025-06-04 06:42:35] 2025-06-04 04:28:38,340 | INFO     | PanDA job id: 6677581062
[2025-06-04 06:42:35] 2025-06-04 04:28:38,340 | INFO     | task id: 45006595
[2025-06-04 06:42:35] 2025-06-04 04:28:38,340 | INFO     | errors: (none)
[2025-06-04 06:42:35] 2025-06-04 04:28:38,340 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:42:35] 2025-06-04 04:28:38,340 | INFO     | pilot state: finished 
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | transexitcode: 0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | exeerrorcode: 0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | exeerrordiag: 
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | exitcode: 0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | exitmsg: OK
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | cpuconsumptiontime: 49043 s
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | nevents: 400
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | neventsw: 0
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | pid: 13934
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | pgrp: 13934
[2025-06-04 06:42:35] 2025-06-04 04:28:38,341 | INFO     | corecount: 8
[2025-06-04 06:42:35] 2025-06-04 04:28:38,342 | INFO     | event service: False
[2025-06-04 06:42:35] 2025-06-04 04:28:38,342 | INFO     | sizes: {0: 2404958, 1: 2405213, 2: 2405213, 12: 2405241, 23: 2405269, 34: 2405297, 45: 2405453, 55: 2405481, 66: 2405509, 77: 2405537, 88: 2405593, 93: 2406107, 98
[2025-06-04 06:42:35] 2025-06-04 04:28:38,342 | INFO     | --------------------------------------------------
[2025-06-04 06:42:35] 2025-06-04 04:28:38,342 | INFO     | 
[2025-06-04 06:42:35] 2025-06-04 04:28:38,342 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 06:42:35] 2025-06-04 04:28:38,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,988 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,988 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,989 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | job 6677581062 has completed (purged errors)
[2025-06-04 06:42:35] 2025-06-04 04:28:38,990 | INFO     | overall cleanup function is called
[2025-06-04 06:42:35] 2025-06-04 04:28:40,003 | INFO     | --- collectZombieJob: --- 10, [13934]
[2025-06-04 06:42:35] 2025-06-04 04:28:40,004 | INFO     | zombie collector waiting for pid 13934
[2025-06-04 06:42:35] 2025-06-04 04:28:40,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:42:35] 2025-06-04 04:28:40,004 | INFO     | collected zombie processes
[2025-06-04 06:42:35] 2025-06-04 04:28:40,004 | INFO     | will attempt to kill all subprocesses of pid=13934
[2025-06-04 06:42:35] 2025-06-04 04:28:40,119 | INFO     | process IDs to be killed: [13934] (in reverse order)
[2025-06-04 06:42:35] 2025-06-04 04:28:41,064 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:42:35] 2025-06-04 04:28:41,065 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:42:35] 2025-06-04 04:28:41,078 | INFO     | did not find any defunct processes belonging to 13934
[2025-06-04 06:42:35] 2025-06-04 04:28:41,082 | INFO     | did not find any defunct processes belonging to 13934
[2025-06-04 06:42:35] 2025-06-04 04:28:41,082 | INFO     | ready for new job
[2025-06-04 06:42:35] 2025-06-04 04:28:41,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:42:35] 2025-06-04 04:28:41,084 | INFO     | **************************************
[2025-06-04 06:42:35] 2025-06-04 04:28:41,084 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 06:42:35] 2025-06-04 04:28:41,084 | INFO     | **************************************
[2025-06-04 06:42:35] 2025-06-04 04:28:41,084 | INFO     | 
[2025-06-04 06:42:35] 2025-06-04 04:28:41,085 | INFO     | pilot is running in a VM
[2025-06-04 06:42:35] 2025-06-04 04:28:41,085 | INFO     | architecture information:
[2025-06-04 06:42:35] 2025-06-04 04:28:41,094 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:42:35] 2025-06-04 04:28:41,420 | INFO     | cat /etc/os-release:
[2025-06-04 06:42:35] NAME="CentOS Linux"
[2025-06-04 06:42:35] VERSION="7 (Core)"
[2025-06-04 06:42:35] ID="centos"
[2025-06-04 06:42:35] ID_LIKE="rhel fedora"
[2025-06-04 06:42:35] VERSION_ID="7"
[2025-06-04 06:42:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:42:35] ANSI_COLOR="0;31"
[2025-06-04 06:42:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:42:35] HOME_URL="https://www.centos.org/"
[2025-06-04 06:42:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:42:35] 
[2025-06-04 06:42:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:42:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:42:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:42:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:42:35] 
[2025-06-04 06:42:35] 2025-06-04 04:28:41,420 | INFO     | **************************************
[2025-06-04 06:42:35] 2025-06-04 04:28:41,925 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 06:42:35] 2025-06-04 04:28:42,124 | INFO     | sufficient remaining disk space (496748199936 B)
[2025-06-04 06:42:35] 2025-06-04 04:28:42,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:42:35] 2025-06-04 04:28:42,125 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:42:35] 2025-06-04 04:28:42,125 | INFO     | update_server=False
[2025-06-04 06:42:35] 2025-06-04 04:28:42,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:42:35] 2025-06-04 04:28:42,126 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:42:35] 2025-06-04 04:28:42,142 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 06:42:35] 2025-06-04 04:28:42,143 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 06:42:35] 2025-06-04 04:28:42,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:42:35] 2025-06-04 04:28:42,143 | INFO     | will abort loop
[2025-06-04 06:42:35] 2025-06-04 04:28:42,536 | INFO     | all data control threads have been joined
[2025-06-04 06:42:35] 2025-06-04 04:28:42,690 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:42:35] 2025-06-04 04:28:42,690 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:42:35] 2025-06-04 04:28:42,690 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:42:35] 2025-06-04 04:28:42,913 | INFO     | all payload control threads have been joined
[2025-06-04 06:42:35] 2025-06-04 04:28:43,132 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:43,149 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:43,160 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:43,164 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:43,246 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:43,296 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:43,303 | INFO     | all job control threads have been joined
[2025-06-04 06:42:35] 2025-06-04 04:28:43,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:42:35] 2025-06-04 04:28:43,544 | INFO     | [data] control thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:43,784 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:43,876 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:43,920 | INFO     | [payload] control thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:44,112 | INFO     | [job] validate thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:44,134 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:44,182 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:44,310 | INFO     | [job] control thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:44,361 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:45,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:42:35] 2025-06-04 04:28:49,513 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:42:35] 2025-06-04 04:28:50,170 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599403448128)>', '<ExcThread(monitor, started 140598958872320)>']
[2025-06-04 06:42:35] 2025-06-04 04:28:50,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:42:35] 2025-06-04 04:28:50,738 | INFO     | [monitor] control thread has ended
[2025-06-04 06:42:35] 2025-06-04 04:28:55,196 | INFO     | all workflow threads have been joined
[2025-06-04 06:42:35] 2025-06-04 04:28:55,196 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:42:35] 2025-06-04 04:28:55,196 | INFO     | traces error code: 0
[2025-06-04 06:42:35] 2025-06-04 04:28:55,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:42:35] 2025-06-04 04:28:55,569 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:42:35] 2025-06-04 04:28:55,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:42:35] 2025-06-04 04:28:55,747 [wrapper] pilotpid: 7311
[2025-06-04 06:42:35] 2025-06-04 04:28:55,872 [wrapper] Pilot exit status: 0
[2025-06-04 06:42:35] 2025-06-04 04:28:56,273 [wrapper] pandaids: 6677581062
[2025-06-04 06:42:35] 2025-06-04 04:28:56,324 [wrapper] cleanup supervisor_pilot  7547 7312
[2025-06-04 06:42:35] 2025-06-04 04:28:56,378 [wrapper] Test setup, not cleaning
[2025-06-04 06:42:35] 2025-06-04 04:28:56,500 [wrapper] apfmon messages muted
[2025-06-04 06:42:35] 2025-06-04 04:28:56,604 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:42:35] 2025-06-04 04:28:56,721 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:42:35]  *** Error codes and diagnostics ***
[2025-06-04 06:42:35]     "exeErrorCode": 0,
[2025-06-04 06:42:35]     "exeErrorDiag": "",
[2025-06-04 06:42:35]     "pilotErrorCode": 0,
[2025-06-04 06:42:35]     "pilotErrorDiag": "",
[2025-06-04 06:42:35]  *** Listing of results directory ***
[2025-06-04 06:42:35] total 392900
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc    495897 Jun  3 12:57 pilot3.tar.gz
[2025-06-04 06:42:35] -rwx------. 1 boinc boinc     37140 Jun  3 13:22 runpilot2-wrapper.sh
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:22 queuedata.json
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:42:35] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:06 run_atlas
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:06 job.xml
[2025-06-04 06:42:35] -rw-r--r--. 2 boinc boinc 213236454 Jun  4 02:06 EVNT.45006593._001225.pool.root.1
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc      6392 Jun  4 02:06 init_data.xml
[2025-06-04 06:42:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:06 start_atlas.sh
[2025-06-04 06:42:35] drwxrwx--x. 2 boinc boinc        68 Jun  4 02:06 shared
[2025-06-04 06:42:35] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:06 input.tar.gz
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:06 boinc_lockfile
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:36 pandaJob.out
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc    986069 Jun  4 02:39 agis_schedconf.cvmfs.json
[2025-06-04 06:42:35] drwx------. 4 boinc boinc      4096 Jun  4 02:40 pilot3
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc 182139184 Jun  4 06:25 HITS.45006595._030575.pool.root.1
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc       531 Jun  4 06:25 boinc_task_state.xml
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc      1018 Jun  4 06:26 memory_monitor_summary.json
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc   1603667 Jun  4 06:27 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc    396669 Jun  4 06:27 log.45006595._030575.job.log.tgz.1
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc        95 Jun  4 06:28 pilot_heartbeat.json
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc      7701 Jun  4 06:28 heartbeat.json
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc      4603 Jun  4 06:28 pilotlog.txt
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc   1169762 Jun  4 06:28 log.45006595._030575.job.log.1
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc       357 Jun  4 06:28 output.list
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc       620 Jun  4 06:28 runtime_log
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc   1587200 Jun  4 06:28 result.tar.gz
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc      8673 Jun  4 06:28 runtime_log.err
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc       657 Jun  4 06:28 9BoKDmRueg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPSYKDmY5Vpin.diag
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:42 boinc_mmap_file
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:42 wrapper_checkpoint.txt
[2025-06-04 06:42:35] -rw-r--r--. 1 boinc boinc     20486 Jun  4 06:42 stderr.txt
[2025-06-04 06:42:35] HITS file was successfully produced:
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc 182139184 Jun  4 06:25 shared/HITS.pool.root.1
[2025-06-04 06:42:35]  *** Contents of shared directory: ***
[2025-06-04 06:42:35] total 388180
[2025-06-04 06:42:35] -rw-r--r--. 2 boinc boinc 213236454 Jun  4 02:06 ATLAS.root_0
[2025-06-04 06:42:35] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:06 start_atlas.sh
[2025-06-04 06:42:35] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:06 input.tar.gz
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc 182139184 Jun  4 06:25 HITS.pool.root.1
[2025-06-04 06:42:35] -rw-------. 1 boinc boinc   1587200 Jun  4 06:28 result.tar.gz
06:42:36 (18301): run_atlas exited; CPU time 49233.604571
06:42:36 (18301): called boinc_finish(0)

</stderr_txt>
]]>

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