Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
11:20:39 (1069195): wrapper (7.7.26015): starting
11:20:39 (1069195): wrapper: running run_atlas (--nthreads 4)
[2025-06-03 11:20:39] Arguments: --nthreads 4
[2025-06-03 11:20:39] Threads: 4
[2025-06-03 11:20:39] Checking for CVMFS
[2025-06-03 11:20:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 11:20:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 11:20:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 11:20:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 11:20:39] 2.12.6.0 2389267 1359 52264 146749 2 56 6095210 6144000 5626 130560 0 7069278 99.998 385163 5163 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2025-06-03 11:20:39] CVMFS is ok
[2025-06-03 11:20:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 11:20:39] Checking for apptainer binary...
[2025-06-03 11:20:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 11:20:39] Running /usr/bin/apptainer --version
[2025-06-03 11:20:39] apptainer version 1.3.4
[2025-06-03 11:20:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 11:20:39] Starfish-Cruncher
[2025-06-03 11:20:39] apptainer works
[2025-06-03 11:20:39] Set ATHENA_PROC_NUMBER=4
[2025-06-03 11:20:39] Set ATHENA_CORE_NUMBER=4
[2025-06-03 11:20:39] Starting ATLAS job with PandaID=6677574102
[2025-06-03 11:20:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 13:09:06]  *** The last 200 lines of the pilot log: ***
[2025-06-03 13:09:06] 2025-06-03 18:08:52,143 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 13:09:06] 2025-06-03 18:08:52,143 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6677574102/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 13:09:06] 2025-06-03 18:08:52,143 | INFO     | extracted standard info from prmon json
[2025-06-03 13:09:06] 2025-06-03 18:08:52,143 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 13:09:06] 2025-06-03 18:08:52,143 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 13:09:06] 2025-06-03 18:08:52,144 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 13:09:06] 2025-06-03 18:08:52,144 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 13:09:06] 2025-06-03 18:08:52,145 | INFO     | fitting pss+swap vs Time
[2025-06-03 13:09:06] 2025-06-03 18:08:52,145 | INFO     | sum of square deviations: 369281342.5
[2025-06-03 13:09:06] 2025-06-03 18:08:52,146 | INFO     | sum of deviations: 4083173805.5000076
[2025-06-03 13:09:06] 2025-06-03 18:08:52,146 | INFO     | mean x: 1748970874.5
[2025-06-03 13:09:06] 2025-06-03 18:08:52,146 | INFO     | mean y: 2308402.4245283017
[2025-06-03 13:09:06] 2025-06-03 18:08:52,146 | INFO     | -- intersect: -19336204648.34202
[2025-06-03 13:09:06] 2025-06-03 18:08:52,146 | INFO     | intersect: -19336204648.34202
[2025-06-03 13:09:06] 2025-06-03 18:08:52,146 | INFO     | chi2: 1.3326451459405813
[2025-06-03 13:09:06] 2025-06-03 18:08:52,147 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,147 | INFO     | sum of deviations: 4123196241.000003
[2025-06-03 13:09:06] 2025-06-03 18:08:52,147 | INFO     | mean x: 1748970722.0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,147 | INFO     | mean y: 2308523.287128713
[2025-06-03 13:09:06] 2025-06-03 18:08:52,147 | INFO     | -- intersect: -22572110138.6931
[2025-06-03 13:09:06] 2025-06-03 18:08:52,147 | INFO     | intersect: -22572110138.6931
[2025-06-03 13:09:06] 2025-06-03 18:08:52,147 | INFO     | chi2: 1.3352875942021398
[2025-06-03 13:09:06] 2025-06-03 18:08:52,147 | INFO     | current chi2=1.3352875942021398 (change=-0.19828596304183674 %)
[2025-06-03 13:09:06] 2025-06-03 18:08:52,147 | INFO     | right removable region: 100
[2025-06-03 13:09:06] 2025-06-03 18:08:52,148 | INFO     | sum of square deviations: 319447850.0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,148 | INFO     | sum of deviations: -7362608316.999999
[2025-06-03 13:09:06] 2025-06-03 18:08:52,148 | INFO     | mean x: 1748971027.0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,148 | INFO     | mean y: 2342328.1485148515
[2025-06-03 13:09:06] 2025-06-03 18:08:52,148 | INFO     | -- intersect: 40312485688.26889
[2025-06-03 13:09:06] 2025-06-03 18:08:52,148 | INFO     | intersect: 40312485688.26889
[2025-06-03 13:09:06] 2025-06-03 18:08:52,148 | INFO     | chi2: 0.009234173137204706
[2025-06-03 13:09:06] 2025-06-03 18:08:52,148 | INFO     | current chi2=0.009234173137204706 (change=99.30707937027849 %)
[2025-06-03 13:09:06] 2025-06-03 18:08:52,149 | INFO     | sum of square deviations: 274312120.0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,149 | INFO     | sum of deviations: -5550083475.000002
[2025-06-03 13:09:06] 2025-06-03 18:08:52,149 | INFO     | mean x: 1748971179.5
[2025-06-03 13:09:06] 2025-06-03 18:08:52,149 | INFO     | mean y: 2336215.0416666665
[2025-06-03 13:09:06] 2025-06-03 18:08:52,149 | INFO     | -- intersect: 35388800515.61363
[2025-06-03 13:09:06] 2025-06-03 18:08:52,149 | INFO     | intersect: 35388800515.61363
[2025-06-03 13:09:06] 2025-06-03 18:08:52,149 | INFO     | chi2: 0.006189277379921558
[2025-06-03 13:09:06] 2025-06-03 18:08:52,149 | INFO     | current chi2=0.006189277379921558 (change=32.9742112481646 %)
[2025-06-03 13:09:06] 2025-06-03 18:08:52,150 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,150 | INFO     | sum of deviations: -4241734795.9999995
[2025-06-03 13:09:06] 2025-06-03 18:08:52,150 | INFO     | mean x: 1748971332.0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,150 | INFO     | mean y: 2331304.5274725277
[2025-06-03 13:09:06] 2025-06-03 18:08:52,150 | INFO     | -- intersect: 31754694212.821617
[2025-06-03 13:09:06] 2025-06-03 18:08:52,150 | INFO     | intersect: 31754694212.821617
[2025-06-03 13:09:06] 2025-06-03 18:08:52,150 | INFO     | chi2: 0.004944989228100005
[2025-06-03 13:09:06] 2025-06-03 18:08:52,150 | INFO     | current chi2=0.004944989228100005 (change=20.103932582794055 %)
[2025-06-03 13:09:06] 2025-06-03 18:08:52,150 | INFO     | left removable region: 30
[2025-06-03 13:09:06] 2025-06-03 18:08:52,151 | INFO     | sum of square deviations: 106336877.5
[2025-06-03 13:09:06] 2025-06-03 18:08:52,151 | INFO     | sum of deviations: -1755919129.4999998
[2025-06-03 13:09:06] 2025-06-03 18:08:52,151 | INFO     | mean x: 1748971606.5
[2025-06-03 13:09:06] 2025-06-03 18:08:52,151 | INFO     | mean y: 2322013.842857143
[2025-06-03 13:09:06] 2025-06-03 18:08:52,151 | INFO     | -- intersect: 28882732770.738514
[2025-06-03 13:09:06] 2025-06-03 18:08:52,151 | INFO     | intersect: 28882732770.738514
[2025-06-03 13:09:06] 2025-06-03 18:08:52,151 | INFO     | chi2: 0.00341656556924821
[2025-06-03 13:09:06] 2025-06-03 18:08:52,151 | INFO     | -- intersect: 28882732770.738514
[2025-06-03 13:09:06] 2025-06-03 18:08:52,151 | INFO     | current memory leak: -16.51 B/s (using 70 data points, chi2=0.00)
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | ..............................
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | . Timing measurements:
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | . get job = 0 s
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | . initial setup = 4 s
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | . payload setup = 4 s
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | . stage-in = 0 s
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | . payload execution = 6451 s
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | . stage-out = 0 s
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | . log creation = 0 s
[2025-06-03 13:09:06] 2025-06-03 18:08:52,152 | INFO     | ..............................
[2025-06-03 13:09:06] 2025-06-03 18:08:52,226 | INFO     | 
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | job summary report
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | --------------------------------------------------
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | PanDA job id: 6677574102
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | task id: 45006595
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | errors: (none)
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | pilot state: finished 
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | transexitcode: 0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | exeerrorcode: 0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | exeerrordiag: 
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | exitcode: 0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | exitmsg: OK
[2025-06-03 13:09:06] 2025-06-03 18:08:52,227 | INFO     | cpuconsumptiontime: 24721 s
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | nevents: 400
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | neventsw: 0
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | pid: 1085692
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | pgrp: 1085692
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | corecount: 4
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | event service: False
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | sizes: {0: 2405020, 1: 2405219, 4: 2405425, 11: 2405453, 6459: 2432443, 6460: 2441398, 6463: 2441582, 6469: 2441752}
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | --------------------------------------------------
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | 
[2025-06-03 13:09:06] 2025-06-03 18:08:52,228 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,245 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | job 6677574102 has completed (purged errors)
[2025-06-03 13:09:06] 2025-06-03 18:08:52,246 | INFO     | overall cleanup function is called
[2025-06-03 13:09:06] 2025-06-03 18:08:53,254 | INFO     | --- collectZombieJob: --- 10, [1085692]
[2025-06-03 13:09:06] 2025-06-03 18:08:53,254 | INFO     | zombie collector waiting for pid 1085692
[2025-06-03 13:09:06] 2025-06-03 18:08:53,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 13:09:06] 2025-06-03 18:08:53,254 | INFO     | collected zombie processes
[2025-06-03 13:09:06] 2025-06-03 18:08:53,254 | INFO     | will attempt to kill all subprocesses of pid=1085692
[2025-06-03 13:09:06] 2025-06-03 18:08:53,428 | INFO     | process IDs to be killed: [1085692] (in reverse order)
[2025-06-03 13:09:06] 2025-06-03 18:08:53,489 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 13:09:06] 2025-06-03 18:08:53,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 13:09:06] 2025-06-03 18:08:53,495 | INFO     | did not find any defunct processes belonging to 1085692
[2025-06-03 13:09:06] 2025-06-03 18:08:53,500 | INFO     | did not find any defunct processes belonging to 1085692
[2025-06-03 13:09:06] 2025-06-03 18:08:53,500 | INFO     | ready for new job
[2025-06-03 13:09:06] 2025-06-03 18:08:53,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 13:09:06] 2025-06-03 18:08:53,501 | INFO     | **************************************
[2025-06-03 13:09:06] 2025-06-03 18:08:53,502 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 13:09:06] 2025-06-03 18:08:53,502 | INFO     | **************************************
[2025-06-03 13:09:06] 2025-06-03 18:08:53,502 | INFO     | 
[2025-06-03 13:09:06] 2025-06-03 18:08:53,503 | INFO     | architecture information:
[2025-06-03 13:09:06] 2025-06-03 18:08:53,503 | INFO     | executing command: cat /etc/os-release
[2025-06-03 13:09:06] 2025-06-03 18:08:53,517 | INFO     | cat /etc/os-release:
[2025-06-03 13:09:06] NAME="CentOS Linux"
[2025-06-03 13:09:06] VERSION="7 (Core)"
[2025-06-03 13:09:06] ID="centos"
[2025-06-03 13:09:06] ID_LIKE="rhel fedora"
[2025-06-03 13:09:06] VERSION_ID="7"
[2025-06-03 13:09:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 13:09:06] ANSI_COLOR="0;31"
[2025-06-03 13:09:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 13:09:06] HOME_URL="https://www.centos.org/"
[2025-06-03 13:09:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 13:09:06] 
[2025-06-03 13:09:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 13:09:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 13:09:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 13:09:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 13:09:06] 
[2025-06-03 13:09:06] 2025-06-03 18:08:53,517 | INFO     | **************************************
[2025-06-03 13:09:06] 2025-06-03 18:08:54,019 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-06-03 13:09:06] 2025-06-03 18:08:54,033 | INFO     | sufficient remaining disk space (1814829203456 B)
[2025-06-03 13:09:06] 2025-06-03 18:08:54,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 13:09:06] 2025-06-03 18:08:54,034 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 13:09:06] 2025-06-03 18:08:54,034 | INFO     | update_server=False
[2025-06-03 13:09:06] 2025-06-03 18:08:54,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 13:09:06] 2025-06-03 18:08:54,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 13:09:06] 2025-06-03 18:08:54,034 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:09:06] 2025-06-03 18:08:54,313 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 13:09:06] 2025-06-03 18:08:54,313 | INFO     | aborting loop
[2025-06-03 13:09:06] 2025-06-03 18:08:54,386 | INFO     | all payload control threads have been joined
[2025-06-03 13:09:06] 2025-06-03 18:08:54,614 | INFO     | all data control threads have been joined
[2025-06-03 13:09:06] 2025-06-03 18:08:54,647 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 13:09:06] 2025-06-03 18:08:54,648 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 13:09:06] 2025-06-03 18:08:54,648 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 13:09:06] 2025-06-03 18:08:55,039 | INFO     | [job] retrieve thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:55,039 | INFO     | [job] queue monitor thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:55,318 | INFO     | [job] job monitor thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:55,324 | INFO     | [data] copytool_in thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:55,365 | INFO     | all job control threads have been joined
[2025-06-03 13:09:06] 2025-06-03 18:08:55,371 | INFO     | [payload] failed_post thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:55,391 | INFO     | [payload] control thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:55,411 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:55,619 | INFO     | [data] control thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:55,843 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:56,039 | INFO     | [data] copytool_out thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:56,090 | INFO     | [job] validate thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:56,315 | INFO     | [payload] validate_post thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:56,333 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:56,370 | INFO     | [job] control thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:56,408 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:08:57,071 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 13:09:06] 2025-06-03 18:09:01,078 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 13:09:06] 2025-06-03 18:09:01,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125899574978368)>', '<ExcThread(monitor, started 125899045340928)>']
[2025-06-03 13:09:06] 2025-06-03 18:09:01,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 13:09:06] 2025-06-03 18:09:01,680 | INFO     | [monitor] control thread has ended
[2025-06-03 13:09:06] 2025-06-03 18:09:06,594 | INFO     | all workflow threads have been joined
[2025-06-03 13:09:06] 2025-06-03 18:09:06,595 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 13:09:06] 2025-06-03 18:09:06,595 | INFO     | traces error code: 0
[2025-06-03 13:09:06] 2025-06-03 18:09:06,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 13:09:06] 2025-06-03 18:09:06,678 [wrapper] ==== pilot stdout END ====
[2025-06-03 13:09:06] 2025-06-03 18:09:06,681 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 13:09:06] 2025-06-03 18:09:06,683 [wrapper] pilotpid: 1075064
[2025-06-03 13:09:06] 2025-06-03 18:09:06,685 [wrapper] Pilot exit status: 0
[2025-06-03 13:09:06] 2025-06-03 18:09:06,693 [wrapper] pandaids: 6677574102
[2025-06-03 13:09:06] 2025-06-03 18:09:06,733 [wrapper] cleanup supervisor_pilot 1301532 1075065
[2025-06-03 13:09:06] 2025-06-03 18:09:06,736 [wrapper] Test setup, not cleaning
[2025-06-03 13:09:06] 2025-06-03 18:09:06,739 [wrapper] apfmon messages muted
[2025-06-03 13:09:06] 2025-06-03 18:09:06,741 [wrapper] ==== wrapper stdout END ====
[2025-06-03 13:09:06] 2025-06-03 18:09:06,743 [wrapper] ==== wrapper stderr END ====
[2025-06-03 13:09:06]  *** Error codes and diagnostics ***
[2025-06-03 13:09:06]     "exeErrorCode": 0,
[2025-06-03 13:09:06]     "exeErrorDiag": "",
[2025-06-03 13:09:06]     "pilotErrorCode": 0,
[2025-06-03 13:09:06]     "pilotErrorDiag": "",
[2025-06-03 13:09:06]  *** Listing of results directory ***
[2025-06-03 13:09:06] total 384772
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc    495897 Jun  3 04:56 pilot3.tar.gz
[2025-06-03 13:09:06] -rwx------ 1 boinc boinc     37140 Jun  3 05:07 runpilot2-wrapper.sh
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc      5111 Jun  3 05:07 queuedata.json
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc       100 Jun  3 11:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 13:09:06] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 11:20 run_atlas
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc       105 Jun  3 11:20 job.xml
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc      9628 Jun  3 11:20 init_data.xml
[2025-06-03 13:09:06] -rw-r--r-- 2 boinc boinc 215270564 Jun  3 11:20 EVNT.45006593._001138.pool.root.1
[2025-06-03 13:09:06] -rw-r--r-- 2 boinc boinc     15093 Jun  3 11:20 start_atlas.sh
[2025-06-03 13:09:06] drwxrwx--x 2 boinc boinc      4096 Jun  3 11:20 shared
[2025-06-03 13:09:06] -rw-r--r-- 2 boinc boinc    508875 Jun  3 11:20 input.tar.gz
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc         0 Jun  3 11:20 boinc_lockfile
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc      2525 Jun  3 11:20 pandaJob.out
[2025-06-03 13:09:06] -rw------- 1 boinc boinc    983734 Jun  3 11:20 agis_schedconf.cvmfs.json
[2025-06-03 13:09:06] -rw------- 1 boinc boinc   1603667 Jun  3 11:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 13:09:06] drwx------ 4 boinc boinc      4096 Jun  3 11:20 pilot3
[2025-06-03 13:09:06] -rw------- 1 boinc boinc 173089001 Jun  3 13:08 HITS.45006595._028472.pool.root.1
[2025-06-03 13:09:06] -rw------- 1 boinc boinc        95 Jun  3 13:08 pilot_heartbeat.json
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc      8192 Jun  3 13:08 boinc_mmap_file
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc        27 Jun  3 13:08 wrapper_checkpoint.txt
[2025-06-03 13:09:06] -rw------- 1 boinc boinc      1025 Jun  3 13:08 memory_monitor_summary.json
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc       529 Jun  3 13:08 boinc_task_state.xml
[2025-06-03 13:09:06] -rw------- 1 boinc boinc    271766 Jun  3 13:08 log.45006595._028472.job.log.tgz.1
[2025-06-03 13:09:06] -rw------- 1 boinc boinc      7678 Jun  3 13:08 heartbeat.json
[2025-06-03 13:09:06] -rw------- 1 boinc boinc      4362 Jun  3 13:09 pilotlog.txt
[2025-06-03 13:09:06] -rw------- 1 boinc boinc    630764 Jun  3 13:09 log.45006595._028472.job.log.1
[2025-06-03 13:09:06] -rw------- 1 boinc boinc       357 Jun  3 13:09 output.list
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc       620 Jun  3 13:09 runtime_log
[2025-06-03 13:09:06] -rw------- 1 boinc boinc    921600 Jun  3 13:09 result.tar.gz
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc      8761 Jun  3 13:09 runtime_log.err
[2025-06-03 13:09:06] -rw------- 1 boinc boinc       653 Jun  3 13:09 cJSNDmFjdg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmZNjKDm6sIhym.diag
[2025-06-03 13:09:06] -rw-r--r-- 1 boinc boinc     20549 Jun  3 13:09 stderr.txt
[2025-06-03 13:09:06] HITS file was successfully produced:
[2025-06-03 13:09:06] -rw------- 1 boinc boinc 173089001 Jun  3 13:08 shared/HITS.pool.root.1
[2025-06-03 13:09:06]  *** Contents of shared directory: ***
[2025-06-03 13:09:06] total 380688
[2025-06-03 13:09:06] -rw-r--r-- 2 boinc boinc 215270564 Jun  3 11:20 ATLAS.root_0
[2025-06-03 13:09:06] -rw-r--r-- 2 boinc boinc     15093 Jun  3 11:20 start_atlas.sh
[2025-06-03 13:09:06] -rw-r--r-- 2 boinc boinc    508875 Jun  3 11:20 input.tar.gz
[2025-06-03 13:09:06] -rw------- 1 boinc boinc 173089001 Jun  3 13:08 HITS.pool.root.1
[2025-06-03 13:09:06] -rw------- 1 boinc boinc    921600 Jun  3 13:09 result.tar.gz
13:09:08 (1069195): run_atlas exited; CPU time 24810.847917
13:09:08 (1069195): called boinc_finish(0)

</stderr_txt>
]]>

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