Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:25:55 (4121308): wrapper (7.7.26015): starting
10:25:55 (4121308): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 10:25:55] Arguments: --nthreads 8
[2025-06-03 10:25:55] Threads: 8
[2025-06-03 10:25:55] Checking for CVMFS
[2025-06-03 10:25:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:25:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:25:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:25:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:25:55] 2.12.6.0 1669502 143420 1100216 146744 2 187 26619956 32935936 8314 130560 2 735156898 99.694 577769924 12666 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 10:25:55] CVMFS is ok
[2025-06-03 10:25:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:25:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 10:25:55] Further information can be found at the LHC@home message board.
[2025-06-03 10:25:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:25:55] Checking for apptainer binary...
[2025-06-03 10:25:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:25:55] Running /usr/bin/apptainer --version
[2025-06-03 10:25:55] apptainer version 1.4.1-1.el9
[2025-06-03 10:25:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:25:56] lc-12-33.aglt2.org
[2025-06-03 10:25:56] apptainer works
[2025-06-03 10:25:56] Set ATHENA_PROC_NUMBER=8
[2025-06-03 10:25:56] Set ATHENA_CORE_NUMBER=8
[2025-06-03 10:25:56] Starting ATLAS job with PandaID=6677550566
[2025-06-03 10:25:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:36:16]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:36:16]  is_altstaged=None
[2025-06-03 11:36:16]  is_tar=False
[2025-06-03 11:36:16]  lfn=log.45006595._027073.job.log.tgz.1
[2025-06-03 11:36:16]  mtime=0
[2025-06-03 11:36:16]  protocol_id=None
[2025-06-03 11:36:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 11:36:16]  replicas=None
[2025-06-03 11:36:16]  scope=mc23_13p6TeV
[2025-06-03 11:36:16]  status=None
[2025-06-03 11:36:16]  status_code=0
[2025-06-03 11:36:16]  storage_token=
[2025-06-03 11:36:16]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6677550566/log.45006595._027073.job.log.tgz.1
[2025-06-03 11:36:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/ea/log.45006595._027073.job.log.tgz.1
[2025-06-03 11:36:16]  workdir=None
[2025-06-03 11:36:16] ]
[2025-06-03 11:36:16] 2025-06-03 15:35:54,098 | INFO     | transferring file log.45006595._027073.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6677550566/log.45006595._027073.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 11:36:16] 2025-06-03 15:35:54,099 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6677550566/log.45006595._027073.job.log.tgz.1 /tmp/boinchome/slots/7/log.45006595._027073.job
[2025-06-03 11:36:16] 2025-06-03 15:35:54,115 | INFO     | adding to output.list: log.45006595._027073.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/ea/log.45006595._027073.job.log.tg
[2025-06-03 11:36:16] 2025-06-03 15:35:54,116 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 11:36:16] 2025-06-03 15:35:54,116 | INFO     | summary of transferred files:
[2025-06-03 11:36:16] 2025-06-03 15:35:54,116 | INFO     |  -- lfn=log.45006595._027073.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 11:36:16] 2025-06-03 15:35:54,116 | INFO     | stage-out finished correctly
[2025-06-03 11:36:16] 2025-06-03 15:35:54,455 | INFO     | PID=4124964 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 11:36:16] 2025-06-03 15:35:54,455 | INFO     | .. there are 11 such processes running
[2025-06-03 11:36:16] 2025-06-03 15:35:55,185 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 11:36:16] 2025-06-03 15:35:56,221 | WARNING  | process 4131717 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 11:36:16] 2025-06-03 15:35:56,222 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6677550566/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:36:16] 2025-06-03 15:35:56,567 | INFO     | number of running child processes to parent process 4131717: 1
[2025-06-03 11:36:16] 2025-06-03 15:35:56,567 | INFO     | maximum number of monitored processes: 6
[2025-06-03 11:36:16] 2025-06-03 15:35:56,873 | INFO     | job 6677550566 has state=finished
[2025-06-03 11:36:16] 2025-06-03 15:35:56,873 | INFO     | preparing for final server update for job 6677550566 in state='finished'
[2025-06-03 11:36:16] 2025-06-03 15:35:56,874 | INFO     | this job has now completed (state=finished)
[2025-06-03 11:36:16] 2025-06-03 15:35:56,874 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 11:36:16] 2025-06-03 15:35:56,874 | INFO     | log transfer has been attempted: DONE
[2025-06-03 11:36:16] 2025-06-03 15:35:56,874 | INFO     | job 6677550566 has finished - writing final server update
[2025-06-03 11:36:16] 2025-06-03 15:35:56,875 | INFO     | total number of processed events: 400 (read)
[2025-06-03 11:36:16] 2025-06-03 15:35:56,892 | INFO     | executing command: lscpu
[2025-06-03 11:36:16] 2025-06-03 15:35:56,980 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 11:36:16] 2025-06-03 15:35:59,071 | INFO     | monitor loop #310: job 0:6677550566 is in state 'finished'
[2025-06-03 11:36:16] 2025-06-03 15:35:59,071 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:36:16] 2025-06-03 15:36:00,665 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 11:36:16] 2025-06-03 15:36:00,666 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6677550566/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:36:16] 2025-06-03 15:36:00,666 | INFO     | extracted standard info from prmon json
[2025-06-03 11:36:16] 2025-06-03 15:36:00,666 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:36:16] 2025-06-03 15:36:00,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:36:16] 2025-06-03 15:36:00,667 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:36:16] 2025-06-03 15:36:00,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:36:16] 2025-06-03 15:36:00,668 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:36:16] 2025-06-03 15:36:00,668 | INFO     | sum of square deviations: 73882315.5
[2025-06-03 11:36:16] 2025-06-03 15:36:00,668 | INFO     | sum of deviations: 8568059603.500001
[2025-06-03 11:36:16] 2025-06-03 15:36:00,668 | INFO     | mean x: 1748962956.5
[2025-06-03 11:36:16] 2025-06-03 15:36:00,668 | INFO     | mean y: 2138476.4677419355
[2025-06-03 11:36:16] 2025-06-03 15:36:00,668 | INFO     | -- intersect: -202823378755.80658
[2025-06-03 11:36:16] 2025-06-03 15:36:00,668 | INFO     | intersect: -202823378755.80658
[2025-06-03 11:36:16] 2025-06-03 15:36:00,668 | INFO     | chi2: 1.174437111887646
[2025-06-03 11:36:16] 2025-06-03 15:36:00,668 | INFO     | -- intersect: -202823378755.80658
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | current memory leak: 115.97 B/s (using 62 data points, chi2=1.17)
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | ..............................
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | . Timing measurements:
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | . get job = 0 s
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | . initial setup = 2 s
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | . payload setup = 6 s
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | . stage-in = 0 s
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | . payload execution = 4162 s
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | . stage-out = 0 s
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | . log creation = 0 s
[2025-06-03 11:36:16] 2025-06-03 15:36:00,669 | INFO     | ..............................
[2025-06-03 11:36:16] 2025-06-03 15:36:00,724 | INFO     | 
[2025-06-03 11:36:16] 2025-06-03 15:36:00,724 | INFO     | job summary report
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | --------------------------------------------------
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | PanDA job id: 6677550566
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | task id: 45006595
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | errors: (none)
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | pilot state: finished 
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | transexitcode: 0
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | exeerrorcode: 0
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | exeerrordiag: 
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | exitcode: 0
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | exitmsg: OK
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | cpuconsumptiontime: 27466 s
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | nevents: 400
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | neventsw: 0
[2025-06-03 11:36:16] 2025-06-03 15:36:00,725 | INFO     | pid: 4131717
[2025-06-03 11:36:16] 2025-06-03 15:36:00,726 | INFO     | pgrp: 4131717
[2025-06-03 11:36:16] 2025-06-03 15:36:00,726 | INFO     | corecount: 8
[2025-06-03 11:36:16] 2025-06-03 15:36:00,726 | INFO     | event service: False
[2025-06-03 11:36:16] 2025-06-03 15:36:00,726 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 4172: 2431297, 4174: 2440238, 4175: 2440422, 4180: 2440592}
[2025-06-03 11:36:16] 2025-06-03 15:36:00,726 | INFO     | --------------------------------------------------
[2025-06-03 11:36:16] 2025-06-03 15:36:00,726 | INFO     | 
[2025-06-03 11:36:16] 2025-06-03 15:36:00,726 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-06-03 11:36:16] 2025-06-03 15:36:00,740 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,741 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,742 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:36:16] 2025-06-03 15:36:00,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,742 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:36:16] 2025-06-03 15:36:00,742 | INFO     | job 6677550566 has completed (purged errors)
[2025-06-03 11:36:16] 2025-06-03 15:36:00,742 | INFO     | overall cleanup function is called
[2025-06-03 11:36:16] 2025-06-03 15:36:01,750 | INFO     | --- collectZombieJob: --- 10, [4131717]
[2025-06-03 11:36:16] 2025-06-03 15:36:01,750 | INFO     | zombie collector waiting for pid 4131717
[2025-06-03 11:36:16] 2025-06-03 15:36:01,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:36:16] 2025-06-03 15:36:01,750 | INFO     | collected zombie processes
[2025-06-03 11:36:16] 2025-06-03 15:36:01,750 | INFO     | will attempt to kill all subprocesses of pid=4131717
[2025-06-03 11:36:16] 2025-06-03 15:36:02,089 | INFO     | process IDs to be killed: [4131717] (in reverse order)
[2025-06-03 11:36:16] 2025-06-03 15:36:02,188 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:36:16] 2025-06-03 15:36:02,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:36:16] 2025-06-03 15:36:02,201 | INFO     | did not find any defunct processes belonging to 4131717
[2025-06-03 11:36:16] 2025-06-03 15:36:02,213 | INFO     | did not find any defunct processes belonging to 4131717
[2025-06-03 11:36:16] 2025-06-03 15:36:02,213 | INFO     | ready for new job
[2025-06-03 11:36:16] 2025-06-03 15:36:02,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:36:16] 2025-06-03 15:36:02,215 | INFO     | **************************************
[2025-06-03 11:36:16] 2025-06-03 15:36:02,215 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:36:16] 2025-06-03 15:36:02,215 | INFO     | **************************************
[2025-06-03 11:36:16] 2025-06-03 15:36:02,215 | INFO     | 
[2025-06-03 11:36:16] 2025-06-03 15:36:02,232 | INFO     | architecture information:
[2025-06-03 11:36:16] 2025-06-03 15:36:02,233 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:36:16] 2025-06-03 15:36:02,248 | INFO     | cat /etc/os-release:
[2025-06-03 11:36:16] NAME="CentOS Linux"
[2025-06-03 11:36:16] VERSION="7 (Core)"
[2025-06-03 11:36:16] ID="centos"
[2025-06-03 11:36:16] ID_LIKE="rhel fedora"
[2025-06-03 11:36:16] VERSION_ID="7"
[2025-06-03 11:36:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:36:16] ANSI_COLOR="0;31"
[2025-06-03 11:36:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:36:16] HOME_URL="https://www.centos.org/"
[2025-06-03 11:36:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:36:16] 
[2025-06-03 11:36:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:36:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:36:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:36:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:36:16] 
[2025-06-03 11:36:16] 2025-06-03 15:36:02,249 | INFO     | **************************************
[2025-06-03 11:36:16] 2025-06-03 15:36:02,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-06-03 11:36:16] 2025-06-03 15:36:02,767 | INFO     | sufficient remaining disk space (70534561792 B)
[2025-06-03 11:36:16] 2025-06-03 15:36:02,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:36:16] 2025-06-03 15:36:02,767 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:36:16] 2025-06-03 15:36:02,768 | INFO     | update_server=False
[2025-06-03 11:36:16] 2025-06-03 15:36:02,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:36:16] 2025-06-03 15:36:02,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:36:16] 2025-06-03 15:36:02,768 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 11:36:16] 2025-06-03 15:36:02,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:36:16] 2025-06-03 15:36:02,769 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:36:16] 2025-06-03 15:36:02,769 | INFO     | aborting loop
[2025-06-03 11:36:16] 2025-06-03 15:36:02,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:36:16] 2025-06-03 15:36:02,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:36:16] 2025-06-03 15:36:03,664 | INFO     | all data control threads have been joined
[2025-06-03 11:36:16] 2025-06-03 15:36:03,664 | INFO     | all job control threads have been joined
[2025-06-03 11:36:16] 2025-06-03 15:36:03,773 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:03,773 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:03,800 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:03,848 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:04,232 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:04,263 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:04,269 | INFO     | all payload control threads have been joined
[2025-06-03 11:36:16] 2025-06-03 15:36:04,669 | INFO     | [data] control thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:04,670 | INFO     | [job] control thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:04,756 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:04,768 | INFO     | [job] validate thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:04,774 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:04,911 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:05,052 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:05,274 | INFO     | [payload] control thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:05,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:36:16] 2025-06-03 15:36:05,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:36:16] 2025-06-03 15:36:06,738 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:09,794 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:36:16] 2025-06-03 15:36:11,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139818366105408)>', '<ExcThread(monitor, started 139817744586496)>']
[2025-06-03 11:36:16] 2025-06-03 15:36:11,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:36:16] 2025-06-03 15:36:11,815 | INFO     | [monitor] control thread has ended
[2025-06-03 11:36:16] 2025-06-03 15:36:16,271 | INFO     | all workflow threads have been joined
[2025-06-03 11:36:16] 2025-06-03 15:36:16,271 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:36:16] 2025-06-03 15:36:16,271 | INFO     | traces error code: 0
[2025-06-03 11:36:16] 2025-06-03 15:36:16,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:36:16] 2025-06-03 15:36:16,401 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:36:16] 2025-06-03 15:36:16,404 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:36:16] 2025-06-03 15:36:16,406 [wrapper] pilotpid: 4124964
[2025-06-03 11:36:16] 2025-06-03 15:36:16,408 [wrapper] Pilot exit status: 0
[2025-06-03 11:36:16] 2025-06-03 15:36:16,416 [wrapper] pandaids: 6677550566
[2025-06-03 11:36:16] 2025-06-03 15:36:16,478 [wrapper] cleanup supervisor_pilot  182352 4124965
[2025-06-03 11:36:16] 2025-06-03 15:36:16,481 [wrapper] Test setup, not cleaning
[2025-06-03 11:36:16] 2025-06-03 15:36:16,483 [wrapper] apfmon messages muted
[2025-06-03 11:36:16] 2025-06-03 15:36:16,486 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:36:16] 2025-06-03 15:36:16,488 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:36:16]  *** Error codes and diagnostics ***
[2025-06-03 11:36:16]     "exeErrorCode": 0,
[2025-06-03 11:36:16]     "exeErrorDiag": "",
[2025-06-03 11:36:16]     "pilotErrorCode": 0,
[2025-06-03 11:36:16]     "pilotErrorDiag": "",
[2025-06-03 11:36:16]  *** Listing of results directory ***
[2025-06-03 11:36:16] total 395360
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 05:07 pilot3.tar.gz
[2025-06-03 11:36:16] -rwx------. 1 boincer umatlas     37140 Jun  3 05:26 runpilot2-wrapper.sh
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 05:26 queuedata.json
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas       100 Jun  3 10:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:36:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 10:25 run_atlas
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas       105 Jun  3 10:25 job.xml
[2025-06-03 11:36:16] -rw-r--r--. 2 boincer umatlas 218129915 Jun  3 10:25 EVNT.45006593._001083.pool.root.1
[2025-06-03 11:36:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:25 start_atlas.sh
[2025-06-03 11:36:16] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 10:25 shared
[2025-06-03 11:36:16] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 10:25 input.tar.gz
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas         0 Jun  3 10:25 boinc_lockfile
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 10:25 pandaJob.out
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas    982724 Jun  3 10:26 agis_schedconf.cvmfs.json
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas   1603667 Jun  3 10:26 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:36:16] drwx------. 4 boincer umatlas      4096 Jun  3 10:26 pilot3
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas      6880 Jun  3 11:29 init_data.xml
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas 181471070 Jun  3 11:35 HITS.45006595._027073.pool.root.1
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas       529 Jun  3 11:35 boinc_task_state.xml
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas        95 Jun  3 11:35 pilot_heartbeat.json
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas      1036 Jun  3 11:35 memory_monitor_summary.json
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas    288744 Jun  3 11:35 log.45006595._027073.job.log.tgz.1
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas      7712 Jun  3 11:36 heartbeat.json
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 11:36 boinc_mmap_file
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas        27 Jun  3 11:36 wrapper_checkpoint.txt
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas      4476 Jun  3 11:36 pilotlog.txt
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas    415296 Jun  3 11:36 log.45006595._027073.job.log.1
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas       357 Jun  3 11:36 output.list
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas       620 Jun  3 11:36 runtime_log
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas    727040 Jun  3 11:36 result.tar.gz
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas      8659 Jun  3 11:36 runtime_log.err
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas       651 Jun  3 11:36 Ju2MDm15cg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmW7XKDmgCcNDo.diag
[2025-06-03 11:36:16] -rw-r--r--. 1 boincer umatlas     21538 Jun  3 11:36 stderr.txt
[2025-06-03 11:36:16] HITS file was successfully produced:
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas 181471070 Jun  3 11:35 shared/HITS.pool.root.1
[2025-06-03 11:36:16]  *** Contents of shared directory: ***
[2025-06-03 11:36:16] total 391476
[2025-06-03 11:36:16] -rw-r--r--. 2 boincer umatlas 218129915 Jun  3 10:25 ATLAS.root_0
[2025-06-03 11:36:16] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 10:25 start_atlas.sh
[2025-06-03 11:36:16] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 10:25 input.tar.gz
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas 181471070 Jun  3 11:35 HITS.pool.root.1
[2025-06-03 11:36:16] -rw-------. 1 boincer umatlas    727040 Jun  3 11:36 result.tar.gz
11:36:18 (4121308): run_atlas exited; CPU time 27629.731249
11:36:18 (4121308): called boinc_finish(0)

</stderr_txt>
]]>

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