Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:56:28 (23386): wrapper (7.7.26015): starting
01:56:28 (23386): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:56:28] Arguments: --nthreads 8
[2025-06-04 01:56:28] Threads: 8
[2025-06-04 01:56:28] Checking for CVMFS
[2025-06-04 01:56:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:56:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:56:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:56:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:56:30] 2.11.2.0 13342 32444 97132 146761 0 103 19598547 25165824 4257 130560 0 16555199 99.761 18078505 1984 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 01:56:30] CVMFS is ok
[2025-06-04 01:56:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:56:30] Checking for apptainer binary...
[2025-06-04 01:56:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:56:30] Running /usr/bin/apptainer --version
[2025-06-04 01:56:30] apptainer version 1.3.2-1.el7
[2025-06-04 01:56:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:58:03] cg-vwn278.simple-grid.lan
[2025-06-04 01:58:03] apptainer works
[2025-06-04 01:58:03] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:58:03] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:58:03] Starting ATLAS job with PandaID=6677581158
[2025-06-04 01:58:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:48:44]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:48:44] 2025-06-04 03:47:29,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:48:44] 2025-06-04 03:47:29,012 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:48:44] 2025-06-04 03:47:29,012 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:48:44] 2025-06-04 03:47:29,017 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:48:44] 2025-06-04 03:47:29,018 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,041 | INFO     | sum of deviations: 6143658004.999998
[2025-06-04 05:48:44] 2025-06-04 03:47:29,042 | INFO     | mean x: 1749002104.0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,042 | INFO     | mean y: 2463056.6359447003
[2025-06-04 05:48:44] 2025-06-04 03:47:29,042 | INFO     | -- intersect: -3388858429.766217
[2025-06-04 05:48:44] 2025-06-04 03:47:29,042 | INFO     | intersect: -3388858429.766217
[2025-06-04 05:48:44] 2025-06-04 03:47:29,043 | INFO     | chi2: 2.4131458533877
[2025-06-04 05:48:44] 2025-06-04 03:47:29,043 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,045 | INFO     | sum of deviations: 20601412178.499996
[2025-06-04 05:48:44] 2025-06-04 03:47:29,045 | INFO     | mean x: 1749001951.5
[2025-06-04 05:48:44] 2025-06-04 03:47:29,045 | INFO     | mean y: 2473162.4858490564
[2025-06-04 05:48:44] 2025-06-04 03:47:29,045 | INFO     | -- intersect: -12193345033.351686
[2025-06-04 05:48:44] 2025-06-04 03:47:29,045 | INFO     | intersect: -12193345033.351686
[2025-06-04 05:48:44] 2025-06-04 03:47:29,046 | INFO     | chi2: 1.5854007258275977
[2025-06-04 05:48:44] 2025-06-04 03:47:29,046 | INFO     | current chi2=1.5854007258275977 (change=34.3014959662745 %)
[2025-06-04 05:48:44] 2025-06-04 03:47:29,046 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,048 | INFO     | sum of deviations: 20057019600.000008
[2025-06-04 05:48:44] 2025-06-04 03:47:29,048 | INFO     | mean x: 1749001799.0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,048 | INFO     | mean y: 2472755.6231884058
[2025-06-04 05:48:44] 2025-06-04 03:47:29,048 | INFO     | -- intersect: -12752435241.36069
[2025-06-04 05:48:44] 2025-06-04 03:47:29,048 | INFO     | intersect: -12752435241.36069
[2025-06-04 05:48:44] 2025-06-04 03:47:29,049 | INFO     | chi2: 1.5864088413564785
[2025-06-04 05:48:44] 2025-06-04 03:47:29,062 | INFO     | current chi2=1.5864088413564785 (change=-0.06358742698030216 %)
[2025-06-04 05:48:44] 2025-06-04 03:47:29,062 | INFO     | right removable region: 206
[2025-06-04 05:48:44] 2025-06-04 03:47:29,063 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,064 | INFO     | sum of deviations: -27340688152.5
[2025-06-04 05:48:44] 2025-06-04 03:47:29,065 | INFO     | mean x: 1749002256.5
[2025-06-04 05:48:44] 2025-06-04 03:47:29,065 | INFO     | mean y: 2486682.8254716983
[2025-06-04 05:48:44] 2025-06-04 03:47:29,065 | INFO     | -- intersect: 16187887825.001328
[2025-06-04 05:48:44] 2025-06-04 03:47:29,065 | INFO     | intersect: 16187887825.001328
[2025-06-04 05:48:44] 2025-06-04 03:47:29,065 | INFO     | chi2: 0.9633894650943128
[2025-06-04 05:48:44] 2025-06-04 03:47:29,065 | INFO     | current chi2=0.9633894650943128 (change=60.0774456404342 %)
[2025-06-04 05:48:44] 2025-06-04 03:47:29,066 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,067 | INFO     | sum of deviations: -24225233048.0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,067 | INFO     | mean x: 1749002409.0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,068 | INFO     | mean y: 2484316.2270531403
[2025-06-04 05:48:44] 2025-06-04 03:47:29,068 | INFO     | -- intersect: 15408099540.310734
[2025-06-04 05:48:44] 2025-06-04 03:47:29,068 | INFO     | intersect: 15408099540.310734
[2025-06-04 05:48:44] 2025-06-04 03:47:29,068 | INFO     | chi2: 0.9465930110587524
[2025-06-04 05:48:44] 2025-06-04 03:47:29,068 | INFO     | current chi2=0.9465930110587524 (change=1.7434749542248817 %)
[2025-06-04 05:48:44] 2025-06-04 03:47:29,068 | INFO     | left removable region: 20
[2025-06-04 05:48:44] 2025-06-04 03:47:29,069 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 05:48:44] 2025-06-04 03:47:29,070 | INFO     | sum of deviations: 4951532504.000001
[2025-06-04 05:48:44] 2025-06-04 03:47:29,070 | INFO     | mean x: 1749002378.5
[2025-06-04 05:48:44] 2025-06-04 03:47:29,070 | INFO     | mean y: 2482554.505376344
[2025-06-04 05:48:44] 2025-06-04 03:47:29,070 | INFO     | -- intersect: -4337873235.995441
[2025-06-04 05:48:44] 2025-06-04 03:47:29,070 | INFO     | intersect: -4337873235.995441
[2025-06-04 05:48:44] 2025-06-04 03:47:29,071 | INFO     | chi2: 0.0009301090973576898
[2025-06-04 05:48:44] 2025-06-04 03:47:29,071 | INFO     | -- intersect: -4337873235.995441
[2025-06-04 05:48:44] 2025-06-04 03:47:29,071 | INFO     | current memory leak: 2.48 B/s (using 186 data points, chi2=0.00)
[2025-06-04 05:48:44] 2025-06-04 03:47:29,072 | INFO     | ..............................
[2025-06-04 05:48:44] 2025-06-04 03:47:29,072 | INFO     | . Timing measurements:
[2025-06-04 05:48:44] 2025-06-04 03:47:29,072 | INFO     | . get job = 0 s
[2025-06-04 05:48:44] 2025-06-04 03:47:29,072 | INFO     | . initial setup = 5 s
[2025-06-04 05:48:44] 2025-06-04 03:47:29,072 | INFO     | . payload setup = 50 s
[2025-06-04 05:48:44] 2025-06-04 03:47:29,072 | INFO     | . stage-in = 0 s
[2025-06-04 05:48:44] 2025-06-04 03:47:29,072 | INFO     | . payload execution = 13257 s
[2025-06-04 05:48:44] 2025-06-04 03:47:29,072 | INFO     | . stage-out = 2 s
[2025-06-04 05:48:44] 2025-06-04 03:47:29,072 | INFO     | . log creation = 0 s
[2025-06-04 05:48:44] 2025-06-04 03:47:29,073 | INFO     | ..............................
[2025-06-04 05:48:44] 2025-06-04 03:47:29,228 | INFO     | 
[2025-06-04 05:48:44] 2025-06-04 03:47:29,228 | INFO     | job summary report
[2025-06-04 05:48:44] 2025-06-04 03:47:29,228 | INFO     | --------------------------------------------------
[2025-06-04 05:48:44] 2025-06-04 03:47:29,228 | INFO     | PanDA job id: 6677581158
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | task id: 45006595
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | errors: (none)
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | pilot state: finished 
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | transexitcode: 0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | exeerrorcode: 0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | exeerrordiag: 
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | exitcode: 0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | exitmsg: OK
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | cpuconsumptiontime: 49400 s
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | nevents: 400
[2025-06-04 05:48:44] 2025-06-04 03:47:29,229 | INFO     | neventsw: 0
[2025-06-04 05:48:44] 2025-06-04 03:47:29,230 | INFO     | pid: 3351
[2025-06-04 05:48:44] 2025-06-04 03:47:29,230 | INFO     | pgrp: 3351
[2025-06-04 05:48:44] 2025-06-04 03:47:29,230 | INFO     | corecount: 8
[2025-06-04 05:48:44] 2025-06-04 03:47:29,230 | INFO     | event service: False
[2025-06-04 05:48:44] 2025-06-04 03:47:29,230 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405212, 22: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 65: 2405508, 76: 2405536, 85: 2405798, 87: 2405826, 13311: 2435641
[2025-06-04 05:48:44] 2025-06-04 03:47:29,230 | INFO     | --------------------------------------------------
[2025-06-04 05:48:44] 2025-06-04 03:47:29,230 | INFO     | 
[2025-06-04 05:48:44] 2025-06-04 03:47:29,230 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 05:48:44] 2025-06-04 03:47:29,745 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,746 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,746 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,746 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,747 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:48:44] 2025-06-04 03:47:29,748 | INFO     | job 6677581158 has completed (purged errors)
[2025-06-04 05:48:44] 2025-06-04 03:47:29,748 | INFO     | overall cleanup function is called
[2025-06-04 05:48:44] 2025-06-04 03:47:30,757 | INFO     | --- collectZombieJob: --- 10, [3351]
[2025-06-04 05:48:44] 2025-06-04 03:47:30,757 | INFO     | zombie collector waiting for pid 3351
[2025-06-04 05:48:44] 2025-06-04 03:47:30,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:48:44] 2025-06-04 03:47:30,757 | INFO     | collected zombie processes
[2025-06-04 05:48:44] 2025-06-04 03:47:30,757 | INFO     | will attempt to kill all subprocesses of pid=3351
[2025-06-04 05:48:44] 2025-06-04 03:47:30,878 | INFO     | process IDs to be killed: [3351] (in reverse order)
[2025-06-04 05:48:44] 2025-06-04 03:47:31,681 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:48:44] 2025-06-04 03:47:31,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:48:44] 2025-06-04 03:47:31,685 | INFO     | did not find any defunct processes belonging to 3351
[2025-06-04 05:48:44] 2025-06-04 03:47:31,688 | INFO     | did not find any defunct processes belonging to 3351
[2025-06-04 05:48:44] 2025-06-04 03:47:31,688 | INFO     | ready for new job
[2025-06-04 05:48:44] 2025-06-04 03:47:31,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:48:44] 2025-06-04 03:47:31,690 | INFO     | **************************************
[2025-06-04 05:48:44] 2025-06-04 03:47:31,691 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:48:44] 2025-06-04 03:47:31,691 | INFO     | **************************************
[2025-06-04 05:48:44] 2025-06-04 03:47:31,691 | INFO     | 
[2025-06-04 05:48:44] 2025-06-04 03:47:31,692 | INFO     | pilot is running in a VM
[2025-06-04 05:48:44] 2025-06-04 03:47:31,692 | INFO     | architecture information:
[2025-06-04 05:48:44] 2025-06-04 03:47:31,704 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:48:44] 2025-06-04 03:47:31,948 | INFO     | cat /etc/os-release:
[2025-06-04 05:48:44] NAME="CentOS Linux"
[2025-06-04 05:48:44] VERSION="7 (Core)"
[2025-06-04 05:48:44] ID="centos"
[2025-06-04 05:48:44] ID_LIKE="rhel fedora"
[2025-06-04 05:48:44] VERSION_ID="7"
[2025-06-04 05:48:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:48:44] ANSI_COLOR="0;31"
[2025-06-04 05:48:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:48:44] HOME_URL="https://www.centos.org/"
[2025-06-04 05:48:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:48:44] 
[2025-06-04 05:48:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:48:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:48:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:48:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:48:44] 
[2025-06-04 05:48:44] 2025-06-04 03:47:31,948 | INFO     | **************************************
[2025-06-04 05:48:44] 2025-06-04 03:47:32,451 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 05:48:44] 2025-06-04 03:47:32,571 | INFO     | sufficient remaining disk space (496878223360 B)
[2025-06-04 05:48:44] 2025-06-04 03:47:32,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:48:44] 2025-06-04 03:47:32,572 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:48:44] 2025-06-04 03:47:32,572 | INFO     | update_server=False
[2025-06-04 05:48:44] 2025-06-04 03:47:32,572 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:48:44] 2025-06-04 03:47:32,573 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:48:44] 2025-06-04 03:47:32,579 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:48:44] 2025-06-04 03:47:32,579 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:48:44] 2025-06-04 03:47:32,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:48:44] 2025-06-04 03:47:32,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:48:44] 2025-06-04 03:47:32,631 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 05:48:44] 2025-06-04 03:47:32,631 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 05:48:44] 2025-06-04 03:47:32,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:48:44] 2025-06-04 03:47:32,632 | INFO     | will abort loop
[2025-06-04 05:48:44] 2025-06-04 03:47:32,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:48:44] 2025-06-04 03:47:33,195 | INFO     | all data control threads have been joined
[2025-06-04 05:48:44] 2025-06-04 03:47:33,440 | INFO     | all payload control threads have been joined
[2025-06-04 05:48:44] 2025-06-04 03:47:33,543 | INFO     | all job control threads have been joined
[2025-06-04 05:48:44] 2025-06-04 03:47:33,578 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:33,637 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:33,748 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:33,786 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:33,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:33,998 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:34,078 | INFO     | [job] validate thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:34,181 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:34,201 | INFO     | [data] control thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:34,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:48:44] 2025-06-04 03:47:34,341 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:34,446 | INFO     | [payload] control thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:34,549 | INFO     | [job] control thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:34,580 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:34,903 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:35,250 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:36,906 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:48:44] 2025-06-04 03:47:37,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817477613376)>', '<ExcThread(monitor, started 139816888956672)>']
[2025-06-04 05:48:44] 2025-06-04 03:47:37,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:48:44] 2025-06-04 03:47:37,610 | INFO     | [monitor] control thread has ended
[2025-06-04 05:48:44] 2025-06-04 03:47:42,515 | INFO     | all workflow threads have been joined
[2025-06-04 05:48:44] 2025-06-04 03:47:42,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:48:44] 2025-06-04 03:47:42,516 | INFO     | traces error code: 0
[2025-06-04 05:48:44] 2025-06-04 03:47:42,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:48:44] 2025-06-04 03:47:42,827 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:48:44] 2025-06-04 03:47:42,866 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:48:44] 2025-06-04 03:47:42,930 [wrapper] pilotpid: 29084
[2025-06-04 05:48:44] 2025-06-04 03:47:43,044 [wrapper] Pilot exit status: 0
[2025-06-04 05:48:44] 2025-06-04 03:47:43,530 [wrapper] pandaids: 6677581158
[2025-06-04 05:48:44] 2025-06-04 03:47:44,182 [wrapper] cleanup supervisor_pilot 24739 29085
[2025-06-04 05:48:44] 2025-06-04 03:47:44,249 [wrapper] Test setup, not cleaning
[2025-06-04 05:48:44] 2025-06-04 03:47:44,299 [wrapper] apfmon messages muted
[2025-06-04 05:48:44] 2025-06-04 03:47:44,388 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:48:44] 2025-06-04 03:47:44,498 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:48:44]  *** Error codes and diagnostics ***
[2025-06-04 05:48:44]     "exeErrorCode": 0,
[2025-06-04 05:48:44]     "exeErrorDiag": "",
[2025-06-04 05:48:44]     "pilotErrorCode": 0,
[2025-06-04 05:48:44]     "pilotErrorDiag": "",
[2025-06-04 05:48:44]  *** Listing of results directory ***
[2025-06-04 05:48:44] total 392236
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc    495897 Jun  3 12:57 pilot3.tar.gz
[2025-06-04 05:48:44] -rwx------. 1 boinc boinc     37140 Jun  3 13:25 runpilot2-wrapper.sh
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:25 queuedata.json
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc       100 Jun  4 01:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:48:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 01:56 run_atlas
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc       105 Jun  4 01:56 job.xml
[2025-06-04 05:48:44] -rw-r--r--. 2 boinc boinc 218871711 Jun  4 01:56 EVNT.45006593._001229.pool.root.1
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc      6391 Jun  4 01:56 init_data.xml
[2025-06-04 05:48:44] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:56 start_atlas.sh
[2025-06-04 05:48:44] drwxrwx--x. 2 boinc boinc        68 Jun  4 01:56 shared
[2025-06-04 05:48:44] -rw-r--r--. 2 boinc boinc    508882 Jun  4 01:56 input.tar.gz
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc         0 Jun  4 01:56 boinc_lockfile
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc      2525 Jun  4 01:58 pandaJob.out
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc    986077 Jun  4 02:01 agis_schedconf.cvmfs.json
[2025-06-04 05:48:44] drwx------. 4 boinc boinc      4096 Jun  4 02:01 pilot3
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc       531 Jun  4 05:44 boinc_task_state.xml
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc 175815273 Jun  4 05:44 HITS.45006595._030671.pool.root.1
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc      1020 Jun  4 05:45 memory_monitor_summary.json
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc   1603667 Jun  4 05:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc    391829 Jun  4 05:45 log.45006595._030671.job.log.tgz.1
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc      7690 Jun  4 05:47 heartbeat.json
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc        95 Jun  4 05:47 pilot_heartbeat.json
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc      4725 Jun  4 05:47 pilotlog.txt
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc   1176541 Jun  4 05:47 log.45006595._030671.job.log.1
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc       357 Jun  4 05:47 output.list
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:47 runtime_log
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc   1587200 Jun  4 05:47 result.tar.gz
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc       656 Jun  4 05:47 yPGNDmBxeg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgSYKDmzr1A5n.diag
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc      8659 Jun  4 05:47 runtime_log.err
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc      8192 Jun  4 05:48 boinc_mmap_file
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc        28 Jun  4 05:48 wrapper_checkpoint.txt
[2025-06-04 05:48:44] -rw-r--r--. 1 boinc boinc     20535 Jun  4 05:48 stderr.txt
[2025-06-04 05:48:44] HITS file was successfully produced:
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc 175815273 Jun  4 05:44 shared/HITS.pool.root.1
[2025-06-04 05:48:44]  *** Contents of shared directory: ***
[2025-06-04 05:48:44] total 387508
[2025-06-04 05:48:44] -rw-r--r--. 2 boinc boinc 218871711 Jun  4 01:56 ATLAS.root_0
[2025-06-04 05:48:44] -rw-r--r--. 2 boinc boinc     15093 Jun  4 01:56 start_atlas.sh
[2025-06-04 05:48:44] -rw-r--r--. 2 boinc boinc    508882 Jun  4 01:56 input.tar.gz
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc 175815273 Jun  4 05:44 HITS.pool.root.1
[2025-06-04 05:48:44] -rw-------. 1 boinc boinc   1587200 Jun  4 05:47 result.tar.gz
05:48:46 (23386): run_atlas exited; CPU time 49588.314730
05:48:46 (23386): called boinc_finish(0)

</stderr_txt>
]]>

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