Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:17:42 (10104): wrapper (7.7.26015): starting
00:17:42 (10104): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:17:42] Arguments: --nthreads 8
[2025-06-04 00:17:42] Threads: 8
[2025-06-04 00:17:42] Checking for CVMFS
[2025-06-04 00:17:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:17:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:17:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:17:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:17:45] 2.11.2.0 13961 32380 88764 146757 1 16 24814719 25165825 4272 130560 0 16377521 99.760 19547107 2332 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 00:17:45] CVMFS is ok
[2025-06-04 00:17:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:17:45] Checking for apptainer binary...
[2025-06-04 00:17:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:17:45] Running /usr/bin/apptainer --version
[2025-06-04 00:17:45] apptainer version 1.3.2-1.el7
[2025-06-04 00:17:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:17:47] cg-vwn452.simple-grid.lan
[2025-06-04 00:17:47] apptainer works
[2025-06-04 00:17:47] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:17:47] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:17:47] Starting ATLAS job with PandaID=6677574164
[2025-06-04 00:17:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:31:09]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:31:09] 2025-06-04 02:18:50,885 | INFO     | extracted standard info from prmon json
[2025-06-04 04:31:09] 2025-06-04 02:18:50,885 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:31:09] 2025-06-04 02:18:50,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:31:09] 2025-06-04 02:18:50,886 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:31:09] 2025-06-04 02:18:50,886 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:31:09] 2025-06-04 02:18:50,891 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:31:09] 2025-06-04 02:18:50,892 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 04:31:09] 2025-06-04 02:18:50,894 | INFO     | sum of deviations: 73067037659.49998
[2025-06-04 04:31:09] 2025-06-04 02:18:50,894 | INFO     | mean x: 1748996569.5
[2025-06-04 04:31:09] 2025-06-04 02:18:50,894 | INFO     | mean y: 2430685.620535714
[2025-06-04 04:31:09] 2025-06-04 02:18:50,894 | INFO     | -- intersect: -36666363964.24655
[2025-06-04 04:31:09] 2025-06-04 02:18:50,894 | INFO     | intersect: -36666363964.24655
[2025-06-04 04:31:09] 2025-06-04 02:18:50,895 | INFO     | chi2: 8.44000687373901
[2025-06-04 04:31:09] 2025-06-04 02:18:50,895 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 04:31:09] 2025-06-04 02:18:50,897 | INFO     | sum of deviations: 86780280123.00002
[2025-06-04 04:31:09] 2025-06-04 02:18:50,897 | INFO     | mean x: 1748996417.0
[2025-06-04 04:31:09] 2025-06-04 02:18:50,897 | INFO     | mean y: 2439665.342465753
[2025-06-04 04:31:09] 2025-06-04 02:18:50,897 | INFO     | -- intersect: -46599957223.75824
[2025-06-04 04:31:09] 2025-06-04 02:18:50,897 | INFO     | intersect: -46599957223.75824
[2025-06-04 04:31:09] 2025-06-04 02:18:50,898 | INFO     | chi2: 7.707497091742225
[2025-06-04 04:31:09] 2025-06-04 02:18:50,898 | INFO     | current chi2=7.707497091742225 (change=8.679018784640819 %)
[2025-06-04 04:31:09] 2025-06-04 02:18:50,898 | INFO     | right removable region: 218
[2025-06-04 04:31:09] 2025-06-04 02:18:50,898 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 04:31:09] 2025-06-04 02:18:50,900 | INFO     | sum of deviations: -5868220678.999994
[2025-06-04 04:31:09] 2025-06-04 02:18:50,900 | INFO     | mean x: 1748996722.0
[2025-06-04 04:31:09] 2025-06-04 02:18:50,900 | INFO     | mean y: 2483404.2328767125
[2025-06-04 04:31:09] 2025-06-04 02:18:50,900 | INFO     | -- intersect: 3153812213.2409186
[2025-06-04 04:31:09] 2025-06-04 02:18:50,901 | INFO     | intersect: 3153812213.2409186
[2025-06-04 04:31:09] 2025-06-04 02:18:50,907 | INFO     | chi2: 3.213023051362904
[2025-06-04 04:31:09] 2025-06-04 02:18:50,908 | INFO     | current chi2=3.213023051362904 (change=61.93103750471827 %)
[2025-06-04 04:31:09] 2025-06-04 02:18:50,908 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 04:31:09] 2025-06-04 02:18:50,910 | INFO     | sum of deviations: -54840677835.50001
[2025-06-04 04:31:09] 2025-06-04 02:18:50,910 | INFO     | mean x: 1748996874.5
[2025-06-04 04:31:09] 2025-06-04 02:18:50,910 | INFO     | mean y: 2517517.808411215
[2025-06-04 04:31:09] 2025-06-04 02:18:50,910 | INFO     | -- intersect: 31565758183.59948
[2025-06-04 04:31:09] 2025-06-04 02:18:50,910 | INFO     | intersect: 31565758183.59948
[2025-06-04 04:31:09] 2025-06-04 02:18:50,911 | INFO     | chi2: 1.110024501517382
[2025-06-04 04:31:09] 2025-06-04 02:18:50,911 | INFO     | current chi2=1.110024501517382 (change=65.45233309027986 %)
[2025-06-04 04:31:09] 2025-06-04 02:18:50,911 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 04:31:09] 2025-06-04 02:18:50,913 | INFO     | sum of deviations: -59609830801.0
[2025-06-04 04:31:09] 2025-06-04 02:18:50,913 | INFO     | mean x: 1748997027.0
[2025-06-04 04:31:09] 2025-06-04 02:18:50,913 | INFO     | mean y: 2520956.3444976076
[2025-06-04 04:31:09] 2025-06-04 02:18:50,913 | INFO     | -- intersect: 36832343014.41275
[2025-06-04 04:31:09] 2025-06-04 02:18:50,913 | INFO     | intersect: 36832343014.41275
[2025-06-04 04:31:09] 2025-06-04 02:18:50,914 | INFO     | chi2: 1.0387318108742178
[2025-06-04 04:31:09] 2025-06-04 02:18:50,914 | INFO     | current chi2=1.0387318108742178 (change=6.42262315342665 %)
[2025-06-04 04:31:09] 2025-06-04 02:18:50,914 | INFO     | left removable region: 30
[2025-06-04 04:31:09] 2025-06-04 02:18:50,915 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 04:31:09] 2025-06-04 02:18:50,916 | INFO     | sum of deviations: -25178651854.49999
[2025-06-04 04:31:09] 2025-06-04 02:18:50,916 | INFO     | mean x: 1748997301.5
[2025-06-04 04:31:09] 2025-06-04 02:18:50,916 | INFO     | mean y: 2517068.686170213
[2025-06-04 04:31:09] 2025-06-04 02:18:50,916 | INFO     | -- intersect: 21376326275.54783
[2025-06-04 04:31:09] 2025-06-04 02:18:50,916 | INFO     | intersect: 21376326275.54783
[2025-06-04 04:31:09] 2025-06-04 02:18:50,917 | INFO     | chi2: 0.15945839376629636
[2025-06-04 04:31:09] 2025-06-04 02:18:50,917 | INFO     | -- intersect: 21376326275.54783
[2025-06-04 04:31:09] 2025-06-04 02:18:50,917 | INFO     | current memory leak: -12.22 B/s (using 188 data points, chi2=0.16)
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | ..............................
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | . Timing measurements:
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | . get job = 0 s
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | . initial setup = 6 s
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | . payload setup = 158 s
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | . stage-in = 0 s
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | . payload execution = 13814 s
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | . stage-out = 3 s
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | . log creation = 1 s
[2025-06-04 04:31:09] 2025-06-04 02:18:50,918 | INFO     | ..............................
[2025-06-04 04:31:09] 2025-06-04 02:18:51,071 | INFO     | 
[2025-06-04 04:31:09] 2025-06-04 02:18:51,071 | INFO     | job summary report
[2025-06-04 04:31:09] 2025-06-04 02:18:51,071 | INFO     | --------------------------------------------------
[2025-06-04 04:31:09] 2025-06-04 02:18:51,072 | INFO     | PanDA job id: 6677574164
[2025-06-04 04:31:09] 2025-06-04 02:18:51,072 | INFO     | task id: 45006595
[2025-06-04 04:31:09] 2025-06-04 02:18:51,072 | INFO     | errors: (none)
[2025-06-04 04:31:09] 2025-06-04 02:18:51,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:31:09] 2025-06-04 02:18:51,072 | INFO     | pilot state: finished 
[2025-06-04 04:31:09] 2025-06-04 02:18:51,072 | INFO     | transexitcode: 0
[2025-06-04 04:31:09] 2025-06-04 02:18:51,072 | INFO     | exeerrorcode: 0
[2025-06-04 04:31:09] 2025-06-04 02:18:51,072 | INFO     | exeerrordiag: 
[2025-06-04 04:31:09] 2025-06-04 02:18:51,072 | INFO     | exitcode: 0
[2025-06-04 04:31:09] 2025-06-04 02:18:51,073 | INFO     | exitmsg: OK
[2025-06-04 04:31:09] 2025-06-04 02:18:51,073 | INFO     | cpuconsumptiontime: 49231 s
[2025-06-04 04:31:09] 2025-06-04 02:18:51,073 | INFO     | nevents: 400
[2025-06-04 04:31:09] 2025-06-04 02:18:51,073 | INFO     | neventsw: 0
[2025-06-04 04:31:09] 2025-06-04 02:18:51,073 | INFO     | pid: 25783
[2025-06-04 04:31:09] 2025-06-04 02:18:51,073 | INFO     | pgrp: 25783
[2025-06-04 04:31:09] 2025-06-04 02:18:51,073 | INFO     | corecount: 8
[2025-06-04 04:31:09] 2025-06-04 02:18:51,073 | INFO     | event service: False
[2025-06-04 04:31:09] 2025-06-04 02:18:51,073 | INFO     | sizes: {0: 2405184, 1: 2405212, 12: 2405212, 22: 2405240, 33: 2405268, 44: 2405324, 55: 2405480, 65: 2405508, 76: 2405536, 87: 2405592, 92: 2405826, 98: 2406134, 1
[2025-06-04 04:31:09] 2025-06-04 02:18:51,074 | INFO     | --------------------------------------------------
[2025-06-04 04:31:09] 2025-06-04 02:18:51,074 | INFO     | 
[2025-06-04 04:31:09] 2025-06-04 02:18:51,074 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 04:31:09] 2025-06-04 02:18:51,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,548 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,548 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,548 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,550 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:31:09] 2025-06-04 02:18:51,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,550 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:31:09] 2025-06-04 02:18:51,550 | INFO     | job 6677574164 has completed (purged errors)
[2025-06-04 04:31:09] 2025-06-04 02:18:51,550 | INFO     | overall cleanup function is called
[2025-06-04 04:31:09] 2025-06-04 02:18:52,560 | INFO     | --- collectZombieJob: --- 10, [25783]
[2025-06-04 04:31:09] 2025-06-04 02:18:52,560 | INFO     | zombie collector waiting for pid 25783
[2025-06-04 04:31:09] 2025-06-04 02:18:52,560 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:31:09] 2025-06-04 02:18:52,561 | INFO     | collected zombie processes
[2025-06-04 04:31:09] 2025-06-04 02:18:52,561 | INFO     | will attempt to kill all subprocesses of pid=25783
[2025-06-04 04:31:09] 2025-06-04 02:18:52,726 | INFO     | process IDs to be killed: [25783] (in reverse order)
[2025-06-04 04:31:09] 2025-06-04 02:18:53,746 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:31:09] 2025-06-04 02:18:53,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:31:09] 2025-06-04 02:18:53,749 | INFO     | did not find any defunct processes belonging to 25783
[2025-06-04 04:31:09] 2025-06-04 02:18:53,753 | INFO     | did not find any defunct processes belonging to 25783
[2025-06-04 04:31:09] 2025-06-04 02:18:53,753 | INFO     | ready for new job
[2025-06-04 04:31:09] 2025-06-04 02:18:53,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:31:09] 2025-06-04 02:18:53,756 | INFO     | **************************************
[2025-06-04 04:31:09] 2025-06-04 02:18:53,756 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:31:09] 2025-06-04 02:18:53,756 | INFO     | **************************************
[2025-06-04 04:31:09] 2025-06-04 02:18:53,756 | INFO     | 
[2025-06-04 04:31:09] 2025-06-04 02:18:53,757 | INFO     | pilot is running in a VM
[2025-06-04 04:31:09] 2025-06-04 02:18:53,757 | INFO     | architecture information:
[2025-06-04 04:31:09] 2025-06-04 02:18:53,762 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:31:09] 2025-06-04 02:18:54,019 | INFO     | cat /etc/os-release:
[2025-06-04 04:31:09] NAME="CentOS Linux"
[2025-06-04 04:31:09] VERSION="7 (Core)"
[2025-06-04 04:31:09] ID="centos"
[2025-06-04 04:31:09] ID_LIKE="rhel fedora"
[2025-06-04 04:31:09] VERSION_ID="7"
[2025-06-04 04:31:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:31:09] ANSI_COLOR="0;31"
[2025-06-04 04:31:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:31:09] HOME_URL="https://www.centos.org/"
[2025-06-04 04:31:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:31:09] 
[2025-06-04 04:31:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:31:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:31:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:31:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:31:09] 
[2025-06-04 04:31:09] 2025-06-04 02:18:54,020 | INFO     | **************************************
[2025-06-04 04:31:09] 2025-06-04 02:18:54,524 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 04:31:09] 2025-06-04 02:18:54,773 | INFO     | sufficient remaining disk space (496816357376 B)
[2025-06-04 04:31:09] 2025-06-04 02:18:54,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:31:09] 2025-06-04 02:18:54,774 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:31:09] 2025-06-04 02:18:54,774 | INFO     | update_server=False
[2025-06-04 04:31:09] 2025-06-04 02:18:54,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:31:09] 2025-06-04 02:18:54,775 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:31:09] 2025-06-04 02:18:54,776 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:31:09] 2025-06-04 02:18:54,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:31:09] 2025-06-04 02:18:54,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:31:09] 2025-06-04 02:18:54,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:31:09] 2025-06-04 02:18:54,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:31:09] 2025-06-04 02:18:54,994 | INFO     | aborting loop
[2025-06-04 04:31:09] 2025-06-04 02:18:55,151 | INFO     | all payload control threads have been joined
[2025-06-04 04:31:09] 2025-06-04 02:18:55,180 | INFO     | all data control threads have been joined
[2025-06-04 04:31:09] 2025-06-04 02:18:55,226 | INFO     | all job control threads have been joined
[2025-06-04 04:31:09] 2025-06-04 02:18:55,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:31:09] 2025-06-04 02:18:55,780 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:55,785 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:55,796 | INFO     | [job] validate thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:56,000 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:56,088 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:31:09] 2025-06-04 02:18:56,157 | INFO     | [payload] control thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:56,186 | INFO     | [data] control thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:56,232 | INFO     | [job] control thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:56,241 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:56,382 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:56,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:56,920 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:57,024 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:57,094 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:57,239 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:57,739 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:58,786 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:31:09] 2025-06-04 02:18:58,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139710417299264)>', '<ExcThread(monitor, started 139709841925888)>']
[2025-06-04 04:31:09] 2025-06-04 02:18:59,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:31:09] 2025-06-04 02:18:59,806 | INFO     | [monitor] control thread has ended
[2025-06-04 04:31:09] 2025-06-04 02:19:03,843 | INFO     | all workflow threads have been joined
[2025-06-04 04:31:09] 2025-06-04 02:19:03,843 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:31:09] 2025-06-04 02:19:03,844 | INFO     | traces error code: 0
[2025-06-04 04:31:09] 2025-06-04 02:19:03,844 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:31:09] 2025-06-04 02:19:04,256 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:31:09] 2025-06-04 02:19:04,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:31:09] 2025-06-04 02:19:04,472 [wrapper] pilotpid: 15169
[2025-06-04 04:31:09] 2025-06-04 02:19:04,570 [wrapper] Pilot exit status: 0
[2025-06-04 04:31:09] 2025-06-04 02:19:05,086 [wrapper] pandaids: 6677574164
[2025-06-04 04:31:09] 2025-06-04 02:19:06,128 [wrapper] cleanup supervisor_pilot  6097 15170
[2025-06-04 04:31:09] 2025-06-04 02:19:06,133 [wrapper] Test setup, not cleaning
[2025-06-04 04:31:09] 2025-06-04 02:19:06,136 [wrapper] apfmon messages muted
[2025-06-04 04:31:09] 2025-06-04 02:19:06,139 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:31:09] 2025-06-04 02:19:06,143 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:31:09]  *** Error codes and diagnostics ***
[2025-06-04 04:31:09]     "exeErrorCode": 0,
[2025-06-04 04:31:09]     "exeErrorDiag": "",
[2025-06-04 04:31:09]     "pilotErrorCode": 0,
[2025-06-04 04:31:09]     "pilotErrorDiag": "",
[2025-06-04 04:31:09]  *** Listing of results directory ***
[2025-06-04 04:31:09] total 390396
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc    495897 Jun  3 11:56 pilot3.tar.gz
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc      5111 Jun  3 12:12 queuedata.json
[2025-06-04 04:31:09] -rwx------. 1 boinc boinc     37140 Jun  3 12:12 runpilot2-wrapper.sh
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc       100 Jun  4 00:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:31:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 00:17 run_atlas
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc       105 Jun  4 00:17 job.xml
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc      6390 Jun  4 00:17 init_data.xml
[2025-06-04 04:31:09] -rw-r--r--. 2 boinc boinc 215146372 Jun  4 00:17 EVNT.45006593._001141.pool.root.1
[2025-06-04 04:31:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:17 start_atlas.sh
[2025-06-04 04:31:09] drwxrwx--x. 2 boinc boinc        68 Jun  4 00:17 shared
[2025-06-04 04:31:09] -rw-r--r--. 2 boinc boinc    508878 Jun  4 00:17 input.tar.gz
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc         0 Jun  4 00:17 boinc_lockfile
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc      2525 Jun  4 00:17 pandaJob.out
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc    986869 Jun  4 00:21 agis_schedconf.cvmfs.json
[2025-06-04 04:31:09] drwx------. 4 boinc boinc      4096 Jun  4 00:21 pilot3
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc 177602738 Jun  4 04:15 HITS.45006595._028534.pool.root.1
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc       531 Jun  4 04:16 boinc_task_state.xml
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc      1019 Jun  4 04:17 memory_monitor_summary.json
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc   1603667 Jun  4 04:17 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc    382903 Jun  4 04:17 log.45006595._028534.job.log.tgz.1
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc        95 Jun  4 04:18 pilot_heartbeat.json
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc      7693 Jun  4 04:18 heartbeat.json
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc      4539 Jun  4 04:19 pilotlog.txt
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc   1219104 Jun  4 04:19 log.45006595._028534.job.log.1
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc       357 Jun  4 04:19 output.list
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:19 runtime_log
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc   1617920 Jun  4 04:19 result.tar.gz
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc      8659 Jun  4 04:19 runtime_log.err
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc       656 Jun  4 04:19 paiMDmgodg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMQjKDm6Og2ln.diag
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc      8192 Jun  4 04:31 boinc_mmap_file
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc        28 Jun  4 04:31 wrapper_checkpoint.txt
[2025-06-04 04:31:09] -rw-r--r--. 1 boinc boinc     20444 Jun  4 04:31 stderr.txt
[2025-06-04 04:31:09] HITS file was successfully produced:
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc 177602738 Jun  4 04:15 shared/HITS.pool.root.1
[2025-06-04 04:31:09]  *** Contents of shared directory: ***
[2025-06-04 04:31:09] total 385644
[2025-06-04 04:31:09] -rw-r--r--. 2 boinc boinc 215146372 Jun  4 00:17 ATLAS.root_0
[2025-06-04 04:31:09] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:17 start_atlas.sh
[2025-06-04 04:31:09] -rw-r--r--. 2 boinc boinc    508878 Jun  4 00:17 input.tar.gz
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc 177602738 Jun  4 04:15 HITS.pool.root.1
[2025-06-04 04:31:09] -rw-------. 1 boinc boinc   1617920 Jun  4 04:19 result.tar.gz
04:31:11 (10104): run_atlas exited; CPU time 49431.690120
04:31:11 (10104): called boinc_finish(0)

</stderr_txt>
]]>

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