Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:27 (1566417): wrapper (7.7.26015): starting
09:56:27 (1566417): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:56:27] Arguments: --nthreads 8
[2025-06-03 09:56:27] Threads: 8
[2025-06-03 09:56:27] Checking for CVMFS
[2025-06-03 09:56:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:56:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:56:28] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:56:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:56:28] 2.12.6.0 956287 146929 214632 146743 0 228 18404015 32935937 4156 130560 0 382146565 99.654 358299181 26170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 09:56:28] CVMFS is ok
[2025-06-03 09:56:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:56:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:56:28] Further information can be found at the LHC@home message board.
[2025-06-03 09:56:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:56:28] Checking for apptainer binary...
[2025-06-03 09:56:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:56:28] Running /usr/bin/apptainer --version
[2025-06-03 09:56:28] apptainer version 1.4.1-1.el9
[2025-06-03 09:56:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:56:28] c-6-4.aglt2.org
[2025-06-03 09:56:28] apptainer works
[2025-06-03 09:56:28] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:56:28] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:56:28] Starting ATLAS job with PandaID=6677580620
[2025-06-03 09:56:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:31:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:31:21]  filesize=305743
[2025-06-03 11:31:21]  filetype=log
[2025-06-03 11:31:21]  guid=a81b7258-3e62-4c28-b1c3-6963db4562ab
[2025-06-03 11:31:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 11:31:21]  is_altstaged=None
[2025-06-03 11:31:21]  is_tar=False
[2025-06-03 11:31:21]  lfn=log.45006595._030430.job.log.tgz.1
[2025-06-03 11:31:21]  mtime=0
[2025-06-03 11:31:21]  protocol_id=None
[2025-06-03 11:31:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 11:31:21]  replicas=None
[2025-06-03 11:31:21]  scope=mc23_13p6TeV
[2025-06-03 11:31:21]  status=None
[2025-06-03 11:31:21]  status_code=0
[2025-06-03 11:31:21]  storage_token=
[2025-06-03 11:31:21]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6677580620/log.45006595._030430.job.log.tgz.1
[2025-06-03 11:31:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/63/log.45006595._030430.job.log.tgz.1
[2025-06-03 11:31:21]  workdir=None
[2025-06-03 11:31:21] ]
[2025-06-03 11:31:21] 2025-06-03 15:31:02,429 | INFO     | transferring file log.45006595._030430.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6677580620/log.45006595._030430.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 11:31:21] 2025-06-03 15:31:02,429 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6677580620/log.45006595._030430.job.log.tgz.1 /tmp/boinchome/slots/2/log.45006595._030430.job
[2025-06-03 11:31:21] 2025-06-03 15:31:02,445 | INFO     | adding to output.list: log.45006595._030430.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d6/63/log.45006595._030430.job.log.tg
[2025-06-03 11:31:21] 2025-06-03 15:31:02,446 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 11:31:21] 2025-06-03 15:31:02,446 | INFO     | summary of transferred files:
[2025-06-03 11:31:21] 2025-06-03 15:31:02,446 | INFO     |  -- lfn=log.45006595._030430.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 11:31:21] 2025-06-03 15:31:02,447 | INFO     | stage-out finished correctly
[2025-06-03 11:31:21] 2025-06-03 15:31:04,065 | INFO     | monitor loop #420: job 0:6677580620 is in state 'finished'
[2025-06-03 11:31:21] 2025-06-03 15:31:04,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:31:21] 2025-06-03 15:31:04,538 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 11:31:21] 2025-06-03 15:31:04,642 | INFO     | job 6677580620 has state=finished
[2025-06-03 11:31:21] 2025-06-03 15:31:04,642 | INFO     | preparing for final server update for job 6677580620 in state='finished'
[2025-06-03 11:31:21] 2025-06-03 15:31:04,642 | INFO     | this job has now completed (state=finished)
[2025-06-03 11:31:21] 2025-06-03 15:31:04,643 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 11:31:21] 2025-06-03 15:31:04,643 | INFO     | log transfer has been attempted: DONE
[2025-06-03 11:31:21] 2025-06-03 15:31:04,643 | INFO     | job 6677580620 has finished - writing final server update
[2025-06-03 11:31:21] 2025-06-03 15:31:04,643 | INFO     | total number of processed events: 400 (read)
[2025-06-03 11:31:21] 2025-06-03 15:31:04,658 | INFO     | executing command: lscpu
[2025-06-03 11:31:21] 2025-06-03 15:31:04,711 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 11:31:21] 2025-06-03 15:31:06,567 | INFO     | monitor loop #421: job 0:6677580620 is in state 'finished'
[2025-06-03 11:31:21] 2025-06-03 15:31:06,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:31:21] 2025-06-03 15:31:08,121 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 11:31:21] 2025-06-03 15:31:08,121 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677580620/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:31:21] 2025-06-03 15:31:08,122 | INFO     | extracted standard info from prmon json
[2025-06-03 11:31:21] 2025-06-03 15:31:08,122 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:31:21] 2025-06-03 15:31:08,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:31:21] 2025-06-03 15:31:08,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:31:21] 2025-06-03 15:31:08,123 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:31:21] 2025-06-03 15:31:08,126 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:31:21] 2025-06-03 15:31:08,126 | INFO     | sum of square deviations: 197203697.5
[2025-06-03 11:31:21] 2025-06-03 15:31:08,127 | INFO     | sum of deviations: 12537949272.000002
[2025-06-03 11:31:21] 2025-06-03 15:31:08,127 | INFO     | mean x: 1748961921.5
[2025-06-03 11:31:21] 2025-06-03 15:31:08,127 | INFO     | mean y: 2131035.1860465114
[2025-06-03 11:31:21] 2025-06-03 15:31:08,127 | INFO     | -- intersect: -111194545946.11978
[2025-06-03 11:31:21] 2025-06-03 15:31:08,127 | INFO     | intersect: -111194545946.11978
[2025-06-03 11:31:21] 2025-06-03 15:31:08,127 | INFO     | chi2: 1.297592256269918
[2025-06-03 11:31:21] 2025-06-03 15:31:08,128 | INFO     | -- intersect: -111194545946.11978
[2025-06-03 11:31:21] 2025-06-03 15:31:08,128 | INFO     | current memory leak: 63.58 B/s (using 86 data points, chi2=1.30)
[2025-06-03 11:31:21] 2025-06-03 15:31:08,128 | INFO     | ..............................
[2025-06-03 11:31:21] 2025-06-03 15:31:08,128 | INFO     | . Timing measurements:
[2025-06-03 11:31:21] 2025-06-03 15:31:08,129 | INFO     | . get job = 0 s
[2025-06-03 11:31:21] 2025-06-03 15:31:08,129 | INFO     | . initial setup = 2 s
[2025-06-03 11:31:21] 2025-06-03 15:31:08,129 | INFO     | . payload setup = 6 s
[2025-06-03 11:31:21] 2025-06-03 15:31:08,129 | INFO     | . stage-in = 0 s
[2025-06-03 11:31:21] 2025-06-03 15:31:08,129 | INFO     | . payload execution = 5637 s
[2025-06-03 11:31:21] 2025-06-03 15:31:08,129 | INFO     | . stage-out = 0 s
[2025-06-03 11:31:21] 2025-06-03 15:31:08,129 | INFO     | . log creation = 0 s
[2025-06-03 11:31:21] 2025-06-03 15:31:08,129 | INFO     | ..............................
[2025-06-03 11:31:21] 2025-06-03 15:31:08,507 | INFO     | 
[2025-06-03 11:31:21] 2025-06-03 15:31:08,507 | INFO     | job summary report
[2025-06-03 11:31:21] 2025-06-03 15:31:08,507 | INFO     | --------------------------------------------------
[2025-06-03 11:31:21] 2025-06-03 15:31:08,508 | INFO     | PanDA job id: 6677580620
[2025-06-03 11:31:21] 2025-06-03 15:31:08,508 | INFO     | task id: 45006595
[2025-06-03 11:31:21] 2025-06-03 15:31:08,508 | INFO     | errors: (none)
[2025-06-03 11:31:21] 2025-06-03 15:31:08,508 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:31:21] 2025-06-03 15:31:08,508 | INFO     | pilot state: finished 
[2025-06-03 11:31:21] 2025-06-03 15:31:08,508 | INFO     | transexitcode: 0
[2025-06-03 11:31:21] 2025-06-03 15:31:08,508 | INFO     | exeerrorcode: 0
[2025-06-03 11:31:21] 2025-06-03 15:31:08,508 | INFO     | exeerrordiag: 
[2025-06-03 11:31:21] 2025-06-03 15:31:08,509 | INFO     | exitcode: 0
[2025-06-03 11:31:21] 2025-06-03 15:31:08,509 | INFO     | exitmsg: OK
[2025-06-03 11:31:21] 2025-06-03 15:31:08,509 | INFO     | cpuconsumptiontime: 37351 s
[2025-06-03 11:31:21] 2025-06-03 15:31:08,509 | INFO     | nevents: 400
[2025-06-03 11:31:21] 2025-06-03 15:31:08,509 | INFO     | neventsw: 0
[2025-06-03 11:31:21] 2025-06-03 15:31:08,509 | INFO     | pid: 1576858
[2025-06-03 11:31:21] 2025-06-03 15:31:08,509 | INFO     | pgrp: 1576858
[2025-06-03 11:31:21] 2025-06-03 15:31:08,509 | INFO     | corecount: 8
[2025-06-03 11:31:21] 2025-06-03 15:31:08,509 | INFO     | event service: False
[2025-06-03 11:31:21] 2025-06-03 15:31:08,510 | INFO     | sizes: {0: 2404356, 1: 2405212, 5: 2405418, 12: 2405474, 5647: 2432018, 5649: 2440959, 5652: 2441143, 5655: 2441313}
[2025-06-03 11:31:21] 2025-06-03 15:31:08,510 | INFO     | --------------------------------------------------
[2025-06-03 11:31:21] 2025-06-03 15:31:08,510 | INFO     | 
[2025-06-03 11:31:21] 2025-06-03 15:31:08,510 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 11:31:21] 2025-06-03 15:31:08,526 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,527 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,527 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,527 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,527 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,527 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,527 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,527 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,528 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,528 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,528 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,528 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,528 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,528 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,528 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,529 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:31:21] 2025-06-03 15:31:08,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,529 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:31:21] 2025-06-03 15:31:08,529 | INFO     | job 6677580620 has completed (purged errors)
[2025-06-03 11:31:21] 2025-06-03 15:31:08,529 | INFO     | overall cleanup function is called
[2025-06-03 11:31:21] 2025-06-03 15:31:09,537 | INFO     | --- collectZombieJob: --- 10, [1576858]
[2025-06-03 11:31:21] 2025-06-03 15:31:09,538 | INFO     | zombie collector waiting for pid 1576858
[2025-06-03 11:31:21] 2025-06-03 15:31:09,538 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:31:21] 2025-06-03 15:31:09,538 | INFO     | collected zombie processes
[2025-06-03 11:31:21] 2025-06-03 15:31:09,538 | INFO     | will attempt to kill all subprocesses of pid=1576858
[2025-06-03 11:31:21] 2025-06-03 15:31:09,810 | INFO     | process IDs to be killed: [1576858] (in reverse order)
[2025-06-03 11:31:21] 2025-06-03 15:31:09,882 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:31:21] 2025-06-03 15:31:09,883 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:31:21] 2025-06-03 15:31:09,891 | INFO     | did not find any defunct processes belonging to 1576858
[2025-06-03 11:31:21] 2025-06-03 15:31:09,899 | INFO     | did not find any defunct processes belonging to 1576858
[2025-06-03 11:31:21] 2025-06-03 15:31:09,899 | INFO     | ready for new job
[2025-06-03 11:31:21] 2025-06-03 15:31:09,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:31:21] 2025-06-03 15:31:09,902 | INFO     | **************************************
[2025-06-03 11:31:21] 2025-06-03 15:31:09,902 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:31:21] 2025-06-03 15:31:09,902 | INFO     | **************************************
[2025-06-03 11:31:21] 2025-06-03 15:31:09,902 | INFO     | 
[2025-06-03 11:31:21] 2025-06-03 15:31:09,916 | INFO     | architecture information:
[2025-06-03 11:31:21] 2025-06-03 15:31:09,916 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:31:21] 2025-06-03 15:31:09,929 | INFO     | cat /etc/os-release:
[2025-06-03 11:31:21] NAME="CentOS Linux"
[2025-06-03 11:31:21] VERSION="7 (Core)"
[2025-06-03 11:31:21] ID="centos"
[2025-06-03 11:31:21] ID_LIKE="rhel fedora"
[2025-06-03 11:31:21] VERSION_ID="7"
[2025-06-03 11:31:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:31:21] ANSI_COLOR="0;31"
[2025-06-03 11:31:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:31:21] HOME_URL="https://www.centos.org/"
[2025-06-03 11:31:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:31:21] 
[2025-06-03 11:31:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:31:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:31:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:31:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:31:21] 
[2025-06-03 11:31:21] 2025-06-03 15:31:09,929 | INFO     | **************************************
[2025-06-03 11:31:21] 2025-06-03 15:31:10,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 11:31:21] 2025-06-03 15:31:10,445 | INFO     | sufficient remaining disk space (74427924480 B)
[2025-06-03 11:31:21] 2025-06-03 15:31:10,446 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:31:21] 2025-06-03 15:31:10,446 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:31:21] 2025-06-03 15:31:10,446 | INFO     | update_server=False
[2025-06-03 11:31:21] 2025-06-03 15:31:10,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:31:21] 2025-06-03 15:31:10,447 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 11:31:21] 2025-06-03 15:31:10,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:31:21] 2025-06-03 15:31:10,447 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:31:21] 2025-06-03 15:31:10,447 | INFO     | aborting loop
[2025-06-03 11:31:21] 2025-06-03 15:31:10,448 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:31:21] 2025-06-03 15:31:10,448 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:31:21] 2025-06-03 15:31:10,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:31:21] 2025-06-03 15:31:10,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:31:21] 2025-06-03 15:31:10,706 | INFO     | all data control threads have been joined
[2025-06-03 11:31:21] 2025-06-03 15:31:10,744 | INFO     | all job control threads have been joined
[2025-06-03 11:31:21] 2025-06-03 15:31:11,452 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:11,453 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:11,458 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:11,478 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:11,527 | INFO     | all payload control threads have been joined
[2025-06-03 11:31:21] 2025-06-03 15:31:11,711 | INFO     | [data] control thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:11,750 | INFO     | [job] control thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:11,837 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:11,969 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:12,528 | INFO     | [payload] control thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:12,541 | INFO     | [job] validate thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:12,566 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:12,659 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:12,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:12,934 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:13,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:31:21] 2025-06-03 15:31:14,252 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:14,657 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:31:21] 2025-06-03 15:31:16,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673451398976)>', '<ExcThread(monitor, started 140672946378496)>']
[2025-06-03 11:31:21] 2025-06-03 15:31:16,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:31:21] 2025-06-03 15:31:16,473 | INFO     | [monitor] control thread has ended
[2025-06-03 11:31:21] 2025-06-03 15:31:21,389 | INFO     | all workflow threads have been joined
[2025-06-03 11:31:21] 2025-06-03 15:31:21,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:31:21] 2025-06-03 15:31:21,389 | INFO     | traces error code: 0
[2025-06-03 11:31:21] 2025-06-03 15:31:21,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:31:21] 2025-06-03 15:31:21,508 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:31:21] 2025-06-03 15:31:21,510 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:31:21] 2025-06-03 15:31:21,512 [wrapper] pilotpid: 1570048
[2025-06-03 11:31:21] 2025-06-03 15:31:21,515 [wrapper] Pilot exit status: 0
[2025-06-03 11:31:21] 2025-06-03 15:31:21,524 [wrapper] pandaids: 6677580620
[2025-06-03 11:31:21] 2025-06-03 15:31:21,570 [wrapper] cleanup supervisor_pilot 1767745 1570049
[2025-06-03 11:31:21] 2025-06-03 15:31:21,572 [wrapper] Test setup, not cleaning
[2025-06-03 11:31:21] 2025-06-03 15:31:21,575 [wrapper] apfmon messages muted
[2025-06-03 11:31:21] 2025-06-03 15:31:21,577 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:31:21] 2025-06-03 15:31:21,579 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:31:21]  *** Error codes and diagnostics ***
[2025-06-03 11:31:21]     "exeErrorCode": 0,
[2025-06-03 11:31:21]     "exeErrorDiag": "",
[2025-06-03 11:31:21]     "pilotErrorCode": 0,
[2025-06-03 11:31:21]     "pilotErrorDiag": "",
[2025-06-03 11:31:21]  *** Listing of results directory ***
[2025-06-03 11:31:21] total 384260
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 06:57 pilot3.tar.gz
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 07:19 queuedata.json
[2025-06-03 11:31:21] -rwx------. 1 boincer umatlas     37140 Jun  3 07:19 runpilot2-wrapper.sh
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas       100 Jun  3 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:31:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 09:56 run_atlas
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas       105 Jun  3 09:56 job.xml
[2025-06-03 11:31:21] -rw-r--r--. 2 boincer umatlas 212990327 Jun  3 09:56 EVNT.45006593._001219.pool.root.1
[2025-06-03 11:31:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:56 start_atlas.sh
[2025-06-03 11:31:21] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 09:56 shared
[2025-06-03 11:31:21] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 09:56 input.tar.gz
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas         0 Jun  3 09:56 boinc_lockfile
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 09:56 pandaJob.out
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas    982724 Jun  3 09:56 agis_schedconf.cvmfs.json
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas   1603667 Jun  3 09:56 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:31:21] drwx------. 4 boincer umatlas      4096 Jun  3 09:56 pilot3
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas      6672 Jun  3 11:28 init_data.xml
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas        95 Jun  3 11:30 pilot_heartbeat.json
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas 174954676 Jun  3 11:30 HITS.45006595._030430.pool.root.1
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas       529 Jun  3 11:30 boinc_task_state.xml
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas      1032 Jun  3 11:30 memory_monitor_summary.json
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas    305743 Jun  3 11:31 log.45006595._030430.job.log.tgz.1
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas      7704 Jun  3 11:31 heartbeat.json
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas        27 Jun  3 11:31 wrapper_checkpoint.txt
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas      4476 Jun  3 11:31 pilotlog.txt
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 11:31 boinc_mmap_file
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas    550276 Jun  3 11:31 log.45006595._030430.job.log.1
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas       357 Jun  3 11:31 output.list
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas       620 Jun  3 11:31 runtime_log
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas    870400 Jun  3 11:31 result.tar.gz
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas       649 Jun  3 11:31 YmtMDmMreg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkjjKDmAtLYtm.diag
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 11:31 runtime_log.err
[2025-06-03 11:31:21] -rw-r--r--. 1 boincer umatlas     21166 Jun  3 11:31 stderr.txt
[2025-06-03 11:31:21] HITS file was successfully produced:
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas 174954676 Jun  3 11:30 shared/HITS.pool.root.1
[2025-06-03 11:31:21]  *** Contents of shared directory: ***
[2025-06-03 11:31:21] total 380228
[2025-06-03 11:31:21] -rw-r--r--. 2 boincer umatlas 212990327 Jun  3 09:56 ATLAS.root_0
[2025-06-03 11:31:21] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:56 start_atlas.sh
[2025-06-03 11:31:21] -rw-r--r--. 2 boincer umatlas    508886 Jun  3 09:56 input.tar.gz
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas 174954676 Jun  3 11:30 HITS.pool.root.1
[2025-06-03 11:31:21] -rw-------. 1 boincer umatlas    870400 Jun  3 11:31 result.tar.gz
11:31:22 (1566417): run_atlas exited; CPU time 37489.212728
11:31:22 (1566417): called boinc_finish(0)

</stderr_txt>
]]>

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