Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:50:41 (21723): wrapper (7.7.26015): starting
23:50:41 (21723): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:50:41] Arguments: --nthreads 8
[2025-06-03 23:50:41] Threads: 8
[2025-06-03 23:50:41] Checking for CVMFS
[2025-06-03 23:50:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:50:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:50:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:50:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:50:42] 2.11.2.0 31527 32472 89260 146755 3 263 24468993 25165825 3752 130560 0 16823166 99.851 18108898 1980 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 23:50:42] CVMFS is ok
[2025-06-03 23:50:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:50:42] Checking for apptainer binary...
[2025-06-03 23:50:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:50:42] Running /usr/bin/apptainer --version
[2025-06-03 23:50:42] apptainer version 1.3.2-1.el7
[2025-06-03 23:50:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:50:44] cg-vwn469.simple-grid.lan
[2025-06-03 23:50:44] apptainer works
[2025-06-03 23:50:44] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:50:44] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:50:44] Starting ATLAS job with PandaID=6677580476
[2025-06-03 23:50:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:13:30]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:13:30] 2025-06-04 01:07:19,015 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6677580476/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:13:30] 2025-06-04 01:07:19,015 | INFO     | extracted standard info from prmon json
[2025-06-04 05:13:30] 2025-06-04 01:07:19,015 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:13:30] 2025-06-04 01:07:19,015 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:13:30] 2025-06-04 01:07:19,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:13:30] 2025-06-04 01:07:19,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:13:30] 2025-06-04 01:07:19,020 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:13:30] 2025-06-04 01:07:19,020 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,022 | INFO     | sum of deviations: 22752955287.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,022 | INFO     | mean x: 1748993320.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,022 | INFO     | mean y: 2449729.2094240836
[2025-06-04 05:13:30] 2025-06-04 01:07:19,022 | INFO     | -- intersect: -18416265920.562466
[2025-06-04 05:13:30] 2025-06-04 01:07:19,022 | INFO     | intersect: -18416265920.562466
[2025-06-04 05:13:30] 2025-06-04 01:07:19,022 | INFO     | chi2: 2.3509560204204134
[2025-06-04 05:13:30] 2025-06-04 01:07:19,029 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 05:13:30] 2025-06-04 01:07:19,031 | INFO     | sum of deviations: 34458472939.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,031 | INFO     | mean x: 1748993167.5
[2025-06-04 05:13:30] 2025-06-04 01:07:19,031 | INFO     | mean y: 2460283.688172043
[2025-06-04 05:13:30] 2025-06-04 01:07:19,031 | INFO     | -- intersect: -30202581241.06989
[2025-06-04 05:13:30] 2025-06-04 01:07:19,031 | INFO     | intersect: -30202581241.06989
[2025-06-04 05:13:30] 2025-06-04 01:07:19,031 | INFO     | chi2: 1.5800226738065521
[2025-06-04 05:13:30] 2025-06-04 01:07:19,031 | INFO     | current chi2=1.5800226738065521 (change=32.79233383855466 %)
[2025-06-04 05:13:30] 2025-06-04 01:07:19,032 | INFO     | sum of square deviations: 1838657730.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,033 | INFO     | sum of deviations: 33370411425.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,033 | INFO     | mean x: 1748993015.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,033 | INFO     | mean y: 2459224.0276243095
[2025-06-04 05:13:30] 2025-06-04 01:07:19,033 | INFO     | -- intersect: -31740597429.589577
[2025-06-04 05:13:30] 2025-06-04 01:07:19,033 | INFO     | intersect: -31740597429.589577
[2025-06-04 05:13:30] 2025-06-04 01:07:19,034 | INFO     | chi2: 1.5808706975931341
[2025-06-04 05:13:30] 2025-06-04 01:07:19,034 | INFO     | current chi2=1.5808706975931341 (change=-0.0536716213406583 %)
[2025-06-04 05:13:30] 2025-06-04 01:07:19,037 | INFO     | right removable region: 180
[2025-06-04 05:13:30] 2025-06-04 01:07:19,037 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 05:13:30] 2025-06-04 01:07:19,039 | INFO     | sum of deviations: -8174146644.000001
[2025-06-04 05:13:30] 2025-06-04 01:07:19,039 | INFO     | mean x: 1748993472.5
[2025-06-04 05:13:30] 2025-06-04 01:07:19,039 | INFO     | mean y: 2477950.946236559
[2025-06-04 05:13:30] 2025-06-04 01:07:19,039 | INFO     | -- intersect: 7167638238.360813
[2025-06-04 05:13:30] 2025-06-04 01:07:19,039 | INFO     | intersect: 7167638238.360813
[2025-06-04 05:13:30] 2025-06-04 01:07:19,039 | INFO     | chi2: 0.820424822655806
[2025-06-04 05:13:30] 2025-06-04 01:07:19,040 | INFO     | current chi2=0.820424822655806 (change=65.1025023212007 %)
[2025-06-04 05:13:30] 2025-06-04 01:07:19,040 | INFO     | sum of square deviations: 1838657730.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,041 | INFO     | sum of deviations: -11153954859.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,041 | INFO     | mean x: 1748993625.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,041 | INFO     | mean y: 2480827.3867403315
[2025-06-04 05:13:30] 2025-06-04 01:07:19,041 | INFO     | -- intersect: 10612501182.795015
[2025-06-04 05:13:30] 2025-06-04 01:07:19,041 | INFO     | intersect: 10612501182.795015
[2025-06-04 05:13:30] 2025-06-04 01:07:19,042 | INFO     | chi2: 0.796498066913687
[2025-06-04 05:13:30] 2025-06-04 01:07:19,042 | INFO     | current chi2=0.796498066913687 (change=2.9163861308663774 %)
[2025-06-04 05:13:30] 2025-06-04 01:07:19,042 | INFO     | left removable region: 20
[2025-06-04 05:13:30] 2025-06-04 01:07:19,042 | INFO     | sum of square deviations: 1270051720.0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,043 | INFO     | sum of deviations: 766378014.0000001
[2025-06-04 05:13:30] 2025-06-04 01:07:19,043 | INFO     | mean x: 1748993594.5
[2025-06-04 05:13:30] 2025-06-04 01:07:19,043 | INFO     | mean y: 2492472.4125
[2025-06-04 05:13:30] 2025-06-04 01:07:19,043 | INFO     | -- intersect: -1052889931.5825369
[2025-06-04 05:13:30] 2025-06-04 01:07:19,043 | INFO     | intersect: -1052889931.5825369
[2025-06-04 05:13:30] 2025-06-04 01:07:19,044 | INFO     | chi2: 0.0028647723870105645
[2025-06-04 05:13:30] 2025-06-04 01:07:19,044 | INFO     | -- intersect: -1052889931.5825369
[2025-06-04 05:13:30] 2025-06-04 01:07:19,044 | INFO     | current memory leak: 0.60 B/s (using 160 data points, chi2=0.00)
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | ..............................
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | . Timing measurements:
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | . get job = 0 s
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | . initial setup = 3 s
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | . payload setup = 12 s
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | . stage-in = 0 s
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | . payload execution = 11643 s
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | . stage-out = 3 s
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | . log creation = 1 s
[2025-06-04 05:13:30] 2025-06-04 01:07:19,045 | INFO     | ..............................
[2025-06-04 05:13:30] 2025-06-04 01:07:19,229 | INFO     | 
[2025-06-04 05:13:30] 2025-06-04 01:07:19,229 | INFO     | job summary report
[2025-06-04 05:13:30] 2025-06-04 01:07:19,229 | INFO     | --------------------------------------------------
[2025-06-04 05:13:30] 2025-06-04 01:07:19,229 | INFO     | PanDA job id: 6677580476
[2025-06-04 05:13:30] 2025-06-04 01:07:19,229 | INFO     | task id: 45006595
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | errors: (none)
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | pilot state: finished 
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | transexitcode: 0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | exeerrorcode: 0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | exeerrordiag: 
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | exitcode: 0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | exitmsg: OK
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | cpuconsumptiontime: 44247 s
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | nevents: 400
[2025-06-04 05:13:30] 2025-06-04 01:07:19,230 | INFO     | neventsw: 0
[2025-06-04 05:13:30] 2025-06-04 01:07:19,231 | INFO     | pid: 1558
[2025-06-04 05:13:30] 2025-06-04 01:07:19,231 | INFO     | pgrp: 1558
[2025-06-04 05:13:30] 2025-06-04 01:07:19,231 | INFO     | corecount: 8
[2025-06-04 05:13:30] 2025-06-04 01:07:19,231 | INFO     | event service: False
[2025-06-04 05:13:30] 2025-06-04 01:07:19,231 | INFO     | sizes: {0: 2404962, 1: 2405161, 9: 2405367, 12: 2405395, 11660: 2434293, 11663: 2443234, 11665: 2443418, 11749: 2443588}
[2025-06-04 05:13:30] 2025-06-04 01:07:19,231 | INFO     | --------------------------------------------------
[2025-06-04 05:13:30] 2025-06-04 01:07:19,231 | INFO     | 
[2025-06-04 05:13:30] 2025-06-04 01:07:19,231 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-04 05:13:30] 2025-06-04 01:07:19,575 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,575 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,575 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,575 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,575 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:13:30] 2025-06-04 01:07:19,576 | INFO     | job 6677580476 has completed (purged errors)
[2025-06-04 05:13:30] 2025-06-04 01:07:19,577 | INFO     | overall cleanup function is called
[2025-06-04 05:13:30] 2025-06-04 01:07:20,585 | INFO     | --- collectZombieJob: --- 10, [1558]
[2025-06-04 05:13:30] 2025-06-04 01:07:20,585 | INFO     | zombie collector waiting for pid 1558
[2025-06-04 05:13:30] 2025-06-04 01:07:20,585 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:13:30] 2025-06-04 01:07:20,585 | INFO     | collected zombie processes
[2025-06-04 05:13:30] 2025-06-04 01:07:20,585 | INFO     | will attempt to kill all subprocesses of pid=1558
[2025-06-04 05:13:30] 2025-06-04 01:07:20,687 | INFO     | process IDs to be killed: [1558] (in reverse order)
[2025-06-04 05:13:30] 2025-06-04 01:07:21,695 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:13:30] 2025-06-04 01:07:21,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:13:30] 2025-06-04 01:07:21,705 | INFO     | did not find any defunct processes belonging to 1558
[2025-06-04 05:13:30] 2025-06-04 01:07:21,708 | INFO     | did not find any defunct processes belonging to 1558
[2025-06-04 05:13:30] 2025-06-04 01:07:21,709 | INFO     | ready for new job
[2025-06-04 05:13:30] 2025-06-04 01:07:21,709 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:13:30] 2025-06-04 01:07:21,711 | INFO     | **************************************
[2025-06-04 05:13:30] 2025-06-04 01:07:21,711 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:13:30] 2025-06-04 01:07:21,711 | INFO     | **************************************
[2025-06-04 05:13:30] 2025-06-04 01:07:21,711 | INFO     | 
[2025-06-04 05:13:30] 2025-06-04 01:07:21,712 | INFO     | pilot is running in a VM
[2025-06-04 05:13:30] 2025-06-04 01:07:21,712 | INFO     | architecture information:
[2025-06-04 05:13:30] 2025-06-04 01:07:21,732 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:13:30] 2025-06-04 01:07:21,931 | INFO     | cat /etc/os-release:
[2025-06-04 05:13:30] NAME="CentOS Linux"
[2025-06-04 05:13:30] VERSION="7 (Core)"
[2025-06-04 05:13:30] ID="centos"
[2025-06-04 05:13:30] ID_LIKE="rhel fedora"
[2025-06-04 05:13:30] VERSION_ID="7"
[2025-06-04 05:13:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:13:30] ANSI_COLOR="0;31"
[2025-06-04 05:13:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:13:30] HOME_URL="https://www.centos.org/"
[2025-06-04 05:13:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:13:30] 
[2025-06-04 05:13:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:13:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:13:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:13:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:13:30] 
[2025-06-04 05:13:30] 2025-06-04 01:07:21,932 | INFO     | **************************************
[2025-06-04 05:13:30] 2025-06-04 01:07:22,435 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-04 05:13:30] 2025-06-04 01:07:22,639 | INFO     | sufficient remaining disk space (496769171456 B)
[2025-06-04 05:13:30] 2025-06-04 01:07:22,640 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:13:30] 2025-06-04 01:07:22,640 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:13:30] 2025-06-04 01:07:22,640 | INFO     | update_server=False
[2025-06-04 05:13:30] 2025-06-04 01:07:22,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:13:30] 2025-06-04 01:07:22,641 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:13:30] 2025-06-04 01:07:22,832 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:13:30] 2025-06-04 01:07:23,242 | INFO     | all data control threads have been joined
[2025-06-04 05:13:30] 2025-06-04 01:07:23,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:13:30] 2025-06-04 01:07:23,331 | INFO     | aborting loop
[2025-06-04 05:13:30] 2025-06-04 01:07:23,522 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:13:30] 2025-06-04 01:07:23,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:13:30] 2025-06-04 01:07:23,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:13:30] 2025-06-04 01:07:23,646 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:23,804 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:23,963 | INFO     | all payload control threads have been joined
[2025-06-04 05:13:30] 2025-06-04 01:07:24,073 | INFO     | all job control threads have been joined
[2025-06-04 05:13:30] 2025-06-04 01:07:24,228 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:13:30] 2025-06-04 01:07:24,248 | INFO     | [data] control thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,296 | INFO     | [job] validate thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,337 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,374 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,499 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,572 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,648 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,917 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:24,969 | INFO     | [payload] control thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:25,079 | INFO     | [job] control thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:25,249 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:26,842 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:13:30] 2025-06-04 01:07:27,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444457547584)>', '<ExcThread(monitor, started 140443836716800)>']
[2025-06-04 05:13:30] 2025-06-04 01:07:27,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:13:30] 2025-06-04 01:07:27,547 | INFO     | [monitor] control thread has ended
[2025-06-04 05:13:30] 2025-06-04 01:07:32,227 | INFO     | all workflow threads have been joined
[2025-06-04 05:13:30] 2025-06-04 01:07:32,227 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:13:30] 2025-06-04 01:07:32,228 | INFO     | traces error code: 0
[2025-06-04 05:13:30] 2025-06-04 01:07:32,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:13:30] 2025-06-04 01:07:32,642 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:13:30] 2025-06-04 01:07:32,739 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:13:30] 2025-06-04 01:07:32,866 [wrapper] pilotpid: 25669
[2025-06-04 05:13:30] 2025-06-04 01:07:32,965 [wrapper] Pilot exit status: 0
[2025-06-04 05:13:30] 2025-06-04 01:07:33,440 [wrapper] pandaids: 6677580476
[2025-06-04 05:13:30] 2025-06-04 01:07:34,068 [wrapper] cleanup supervisor_pilot 13816 25670
[2025-06-04 05:13:30] 2025-06-04 01:07:34,165 [wrapper] Test setup, not cleaning
[2025-06-04 05:13:30] 2025-06-04 01:07:34,205 [wrapper] apfmon messages muted
[2025-06-04 05:13:30] 2025-06-04 01:07:34,277 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:13:30] 2025-06-04 01:07:34,345 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:13:30]  *** Error codes and diagnostics ***
[2025-06-04 05:13:30]     "exeErrorCode": 0,
[2025-06-04 05:13:30]     "exeErrorDiag": "",
[2025-06-04 05:13:30]     "pilotErrorCode": 0,
[2025-06-04 05:13:30]     "pilotErrorDiag": "",
[2025-06-04 05:13:30]  *** Listing of results directory ***
[2025-06-04 05:13:30] total 391420
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc    495897 Jun  3 12:57 pilot3.tar.gz
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:16 queuedata.json
[2025-06-04 05:13:30] -rwx------. 1 boinc boinc     37140 Jun  3 13:17 runpilot2-wrapper.sh
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc       100 Jun  3 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:13:30] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 23:50 run_atlas
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc       105 Jun  3 23:50 job.xml
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc      6392 Jun  3 23:50 init_data.xml
[2025-06-04 05:13:30] -rw-r--r--. 2 boinc boinc 214952382 Jun  3 23:50 EVNT.45006593._001212.pool.root.1
[2025-06-04 05:13:30] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:50 start_atlas.sh
[2025-06-04 05:13:30] drwxrwx--x. 2 boinc boinc        68 Jun  3 23:50 shared
[2025-06-04 05:13:30] -rw-r--r--. 2 boinc boinc    508879 Jun  3 23:50 input.tar.gz
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc         0 Jun  3 23:50 boinc_lockfile
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc      2524 Jun  3 23:50 pandaJob.out
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc    986853 Jun  3 23:51 agis_schedconf.cvmfs.json
[2025-06-04 05:13:30] drwx------. 4 boinc boinc      4096 Jun  3 23:51 pilot3
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc 179276608 Jun  4 03:04 HITS.45006595._030286.pool.root.1
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc       531 Jun  4 03:04 boinc_task_state.xml
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc      1017 Jun  4 03:05 memory_monitor_summary.json
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc   1603667 Jun  4 03:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc    363865 Jun  4 03:05 log.45006595._030286.job.log.tgz.1
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc        95 Jun  4 03:06 pilot_heartbeat.json
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc      7697 Jun  4 03:07 heartbeat.json
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc      4416 Jun  4 03:07 pilotlog.txt
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc   1022952 Jun  4 03:07 log.45006595._030286.job.log.1
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc       357 Jun  4 03:07 output.list
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc       620 Jun  4 03:07 runtime_log
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc   1402880 Jun  4 03:07 result.tar.gz
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc      8659 Jun  4 03:07 runtime_log.err
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc       656 Jun  4 03:07 HWGNDmCpeg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmgRYKDmK3HPvn.diag
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc      8192 Jun  4 05:13 boinc_mmap_file
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc        28 Jun  4 05:13 wrapper_checkpoint.txt
[2025-06-04 05:13:30] -rw-r--r--. 1 boinc boinc     20471 Jun  4 05:13 stderr.txt
[2025-06-04 05:13:30] HITS file was successfully produced:
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc 179276608 Jun  4 03:04 shared/HITS.pool.root.1
[2025-06-04 05:13:30]  *** Contents of shared directory: ***
[2025-06-04 05:13:30] total 386880
[2025-06-04 05:13:30] -rw-r--r--. 2 boinc boinc 214952382 Jun  3 23:50 ATLAS.root_0
[2025-06-04 05:13:30] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:50 start_atlas.sh
[2025-06-04 05:13:30] -rw-r--r--. 2 boinc boinc    508879 Jun  3 23:50 input.tar.gz
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc 179276608 Jun  4 03:04 HITS.pool.root.1
[2025-06-04 05:13:30] -rw-------. 1 boinc boinc   1402880 Jun  4 03:07 result.tar.gz
05:13:32 (21723): run_atlas exited; CPU time 44387.809512
05:13:32 (21723): called boinc_finish(0)

</stderr_txt>
]]>

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