Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
10:39:56 (1083664): wrapper (7.7.26015): starting
10:39:56 (1083664): wrapper: running run_atlas (--nthreads 2)
[2025-06-03 10:39:56] Arguments: --nthreads 2
[2025-06-03 10:39:56] Threads: 2
[2025-06-03 10:39:56] Checking for CVMFS
[2025-06-03 10:39:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 10:39:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 10:39:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 10:39:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 10:39:56] 2.12.7.0 979791 96 49720 146748 3 56 5100509 6144000 922 130560 0 136009 99.991 73999 5141 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-03 10:39:56] CVMFS is ok
[2025-06-03 10:39:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 10:39:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-03 10:39:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-03 10:39:56] Further information can be found at the LHC@home message board.
[2025-06-03 10:39:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 10:39:56] Checking for apptainer binary...
[2025-06-03 10:39:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 10:39:56] Running /usr/bin/apptainer --version
[2025-06-03 10:39:56] apptainer version 1.4.0
[2025-06-03 10:39:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 10:39:56] Aphrodite
[2025-06-03 10:39:56] apptainer works
[2025-06-03 10:39:56] Set ATHENA_PROC_NUMBER=2
[2025-06-03 10:39:56] Set ATHENA_CORE_NUMBER=2
[2025-06-03 10:39:56] Starting ATLAS job with PandaID=6677580501
[2025-06-03 10:39:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:19:27]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:19:27] 2025-06-03 17:18:31,204 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 12:19:27] 2025-06-03 17:18:31,205 | INFO     | log transfer has been attempted: DONE
[2025-06-03 12:19:27] 2025-06-03 17:18:31,205 | INFO     | job 6677580501 has finished - writing final server update
[2025-06-03 12:19:27] 2025-06-03 17:18:31,205 | INFO     | total number of processed events: 400 (read)
[2025-06-03 12:19:27] 2025-06-03 17:18:31,206 | INFO     | executing command: lscpu
[2025-06-03 12:19:27] 2025-06-03 17:18:31,218 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 12:19:27] 2025-06-03 17:18:32,831 | INFO     | monitor loop #453: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:32,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:35,334 | INFO     | monitor loop #454: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:35,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:37,837 | INFO     | monitor loop #455: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:37,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:38,568 | INFO     | PID=1087398 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 12:19:27] 2025-06-03 17:18:38,568 | INFO     | .. there are 2 such processes running
[2025-06-03 12:19:27] 2025-06-03 17:18:40,339 | INFO     | monitor loop #456: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:40,339 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:42,842 | INFO     | monitor loop #457: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:42,842 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:45,342 | INFO     | monitor loop #458: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:45,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:45,584 | INFO     | 5925s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 12:19:27] 2025-06-03 17:18:47,845 | INFO     | monitor loop #459: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:47,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:50,348 | INFO     | monitor loop #460: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:50,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:52,851 | INFO     | monitor loop #461: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:52,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:55,354 | INFO     | monitor loop #462: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:55,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:18:57,856 | INFO     | monitor loop #463: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:18:57,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:19:00,357 | INFO     | monitor loop #464: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:19:00,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:19:00,729 | INFO     | PID=1087398 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 12:19:27] 2025-06-03 17:19:00,729 | INFO     | .. there are 2 such processes running
[2025-06-03 12:19:27] 2025-06-03 17:19:02,860 | INFO     | monitor loop #465: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:19:02,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:19:05,362 | INFO     | monitor loop #466: job 0:6677580501 is in state 'finished'
[2025-06-03 12:19:27] 2025-06-03 17:19:05,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 12:19:27] 2025-06-03 17:19:07,121 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 12:19:27] 2025-06-03 17:19:07,121 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6677580501/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:19:27] 2025-06-03 17:19:07,122 | INFO     | extracted standard info from prmon json
[2025-06-03 12:19:27] 2025-06-03 17:19:07,122 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:19:27] 2025-06-03 17:19:07,122 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:19:27] 2025-06-03 17:19:07,122 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:19:27] 2025-06-03 17:19:07,122 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:19:27] 2025-06-03 17:19:07,123 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:19:27] 2025-06-03 17:19:07,123 | INFO     | sum of square deviations: 226022842.5
[2025-06-03 12:19:27] 2025-06-03 17:19:07,123 | INFO     | sum of deviations: -20290628097.49999
[2025-06-03 12:19:27] 2025-06-03 17:19:07,123 | INFO     | mean x: 1748968238.5
[2025-06-03 12:19:27] 2025-06-03 17:19:07,123 | INFO     | mean y: 2380463.5888888887
[2025-06-03 12:19:27] 2025-06-03 17:19:07,123 | INFO     | -- intersect: 157011573380.64178
[2025-06-03 12:19:27] 2025-06-03 17:19:07,123 | INFO     | intersect: 157011573380.64178
[2025-06-03 12:19:27] 2025-06-03 17:19:07,123 | INFO     | chi2: 0.1652106708129797
[2025-06-03 12:19:27] 2025-06-03 17:19:07,123 | INFO     | -- intersect: 157011573380.64178
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | current memory leak: -89.77 B/s (using 90 data points, chi2=0.17)
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | ..............................
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | . Timing measurements:
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | . get job = 0 s
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | . initial setup = 2 s
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | . payload setup = 2 s
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | . stage-in = 0 s
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | . payload execution = 5887 s
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | . stage-out = 0 s
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | . log creation = 0 s
[2025-06-03 12:19:27] 2025-06-03 17:19:07,124 | INFO     | ..............................
[2025-06-03 12:19:27] 2025-06-03 17:19:07,606 | INFO     | 
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | job summary report
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | --------------------------------------------------
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | PanDA job id: 6677580501
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | task id: 45006595
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | errors: (none)
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | pilot state: finished 
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | transexitcode: 0
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | exeerrorcode: 0
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | exeerrordiag: 
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | exitcode: 0
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | exitmsg: OK
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | cpuconsumptiontime: 11613 s
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | nevents: 400
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | neventsw: 0
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | pid: 1094091
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | pgrp: 1094091
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | corecount: 2
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | event service: False
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | sizes: {0: 2405184, 2: 2405390, 11: 2405418, 5893: 2432111, 5894: 2441052, 5897: 2441108, 5933: 2441406}
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | --------------------------------------------------
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | 
[2025-06-03 12:19:27] 2025-06-03 17:19:07,607 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-03 12:19:27] 2025-06-03 17:19:07,616 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,616 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,616 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,616 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | job 6677580501 has completed (purged errors)
[2025-06-03 12:19:27] 2025-06-03 17:19:07,617 | INFO     | overall cleanup function is called
[2025-06-03 12:19:27] 2025-06-03 17:19:08,624 | INFO     | --- collectZombieJob: --- 10, [1094091]
[2025-06-03 12:19:27] 2025-06-03 17:19:08,624 | INFO     | zombie collector waiting for pid 1094091
[2025-06-03 12:19:27] 2025-06-03 17:19:08,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:19:27] 2025-06-03 17:19:08,624 | INFO     | collected zombie processes
[2025-06-03 12:19:27] 2025-06-03 17:19:08,624 | INFO     | will attempt to kill all subprocesses of pid=1094091
[2025-06-03 12:19:27] 2025-06-03 17:19:08,715 | INFO     | process IDs to be killed: [1094091] (in reverse order)
[2025-06-03 12:19:27] 2025-06-03 17:19:08,748 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:19:27] 2025-06-03 17:19:08,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:19:27] 2025-06-03 17:19:08,752 | INFO     | did not find any defunct processes belonging to 1094091
[2025-06-03 12:19:27] 2025-06-03 17:19:08,754 | INFO     | did not find any defunct processes belonging to 1094091
[2025-06-03 12:19:27] 2025-06-03 17:19:08,754 | INFO     | ready for new job
[2025-06-03 12:19:27] 2025-06-03 17:19:08,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:19:27] 2025-06-03 17:19:08,755 | INFO     | **************************************
[2025-06-03 12:19:27] 2025-06-03 17:19:08,755 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:19:27] 2025-06-03 17:19:08,755 | INFO     | **************************************
[2025-06-03 12:19:27] 2025-06-03 17:19:08,755 | INFO     | 
[2025-06-03 12:19:27] 2025-06-03 17:19:08,755 | INFO     | architecture information:
[2025-06-03 12:19:27] 2025-06-03 17:19:08,756 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:19:27] 2025-06-03 17:19:08,762 | INFO     | cat /etc/os-release:
[2025-06-03 12:19:27] NAME="CentOS Linux"
[2025-06-03 12:19:27] VERSION="7 (Core)"
[2025-06-03 12:19:27] ID="centos"
[2025-06-03 12:19:27] ID_LIKE="rhel fedora"
[2025-06-03 12:19:27] VERSION_ID="7"
[2025-06-03 12:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:19:27] ANSI_COLOR="0;31"
[2025-06-03 12:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:19:27] HOME_URL="https://www.centos.org/"
[2025-06-03 12:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:19:27] 
[2025-06-03 12:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:19:27] 
[2025-06-03 12:19:27] 2025-06-03 17:19:08,762 | INFO     | **************************************
[2025-06-03 12:19:27] 2025-06-03 17:19:09,265 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-03 12:19:27] 2025-06-03 17:19:09,273 | INFO     | sufficient remaining disk space (2662402621440 B)
[2025-06-03 12:19:27] 2025-06-03 17:19:09,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:19:27] 2025-06-03 17:19:09,273 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:19:27] 2025-06-03 17:19:09,273 | INFO     | update_server=False
[2025-06-03 12:19:27] 2025-06-03 17:19:09,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:19:27] 2025-06-03 17:19:09,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:19:27] 2025-06-03 17:19:09,273 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:19:27] 2025-06-03 17:19:09,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:19:27] 2025-06-03 17:19:09,273 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:19:27] 2025-06-03 17:19:09,274 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:19:27] 2025-06-03 17:19:09,274 | INFO     | aborting loop
[2025-06-03 12:19:27] 2025-06-03 17:19:09,274 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:19:27] 2025-06-03 17:19:09,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:19:27] 2025-06-03 17:19:09,452 | INFO     | all payload control threads have been joined
[2025-06-03 12:19:27] 2025-06-03 17:19:09,995 | INFO     | all data control threads have been joined
[2025-06-03 12:19:27] 2025-06-03 17:19:10,278 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:10,279 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:10,405 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:10,409 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:10,457 | INFO     | [payload] control thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:10,582 | INFO     | all job control threads have been joined
[2025-06-03 12:19:27] 2025-06-03 17:19:10,740 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:11,000 | INFO     | [data] control thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:11,279 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:11,366 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:11,587 | INFO     | [job] control thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:11,599 | INFO     | [job] validate thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:11,615 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:11,623 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:12,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:19:27] 2025-06-03 17:19:13,157 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:13,279 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:19,744 | INFO     | job.realtimelogging is not enabled
[2025-06-03 12:19:27] 2025-06-03 17:19:20,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:19:27] 2025-06-03 17:19:22,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073967667008)>', '<ExcThread(monitor, started 140073471289088)>']
[2025-06-03 12:19:27] 2025-06-03 17:19:22,325 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:19:27] 2025-06-03 17:19:22,325 | INFO     | [monitor] control thread has ended
[2025-06-03 12:19:27] 2025-06-03 17:19:27,258 | INFO     | all workflow threads have been joined
[2025-06-03 12:19:27] 2025-06-03 17:19:27,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:19:27] 2025-06-03 17:19:27,259 | INFO     | traces error code: 0
[2025-06-03 12:19:27] 2025-06-03 17:19:27,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:19:27] 2025-06-03 17:19:27,298 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:19:27] 2025-06-03 17:19:27,299 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:19:27] 2025-06-03 17:19:27,300 [wrapper] pilotpid: 1087398
[2025-06-03 12:19:27] 2025-06-03 17:19:27,301 [wrapper] Pilot exit status: 0
[2025-06-03 12:19:27] 2025-06-03 17:19:27,305 [wrapper] pandaids: 6677580501
[2025-06-03 12:19:27] 2025-06-03 17:19:27,328 [wrapper] cleanup supervisor_pilot 1183099 1087399
[2025-06-03 12:19:27] 2025-06-03 17:19:27,329 [wrapper] Test setup, not cleaning
[2025-06-03 12:19:27] 2025-06-03 17:19:27,330 [wrapper] apfmon messages muted
[2025-06-03 12:19:27] 2025-06-03 17:19:27,332 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:19:27] 2025-06-03 17:19:27,333 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:19:27]  *** Error codes and diagnostics ***
[2025-06-03 12:19:27]     "exeErrorCode": 0,
[2025-06-03 12:19:27]     "exeErrorDiag": "",
[2025-06-03 12:19:27]     "pilotErrorCode": 0,
[2025-06-03 12:19:27]     "pilotErrorDiag": "",
[2025-06-03 12:19:27]  *** Listing of results directory ***
[2025-06-03 12:19:27] total 389880
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc    495897 Jun  3 05:57 pilot3.tar.gz
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc      5111 Jun  3 06:17 queuedata.json
[2025-06-03 12:19:27] -rwx------ 1 boinc boinc     37140 Jun  3 06:17 runpilot2-wrapper.sh
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc       100 Jun  3 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:19:27] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 10:39 run_atlas
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc       105 Jun  3 10:39 job.xml
[2025-06-03 12:19:27] -rw-r--r-- 2 boinc boinc 215917674 Jun  3 10:39 EVNT.45006593._001213.pool.root.1
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc      6996 Jun  3 10:39 init_data.xml
[2025-06-03 12:19:27] drwxrwx--x 1 boinc boinc        76 Jun  3 10:39 shared
[2025-06-03 12:19:27] -rw-r--r-- 2 boinc boinc    508879 Jun  3 10:39 input.tar.gz
[2025-06-03 12:19:27] -rw-r--r-- 2 boinc boinc     15093 Jun  3 10:39 start_atlas.sh
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc         0 Jun  3 10:39 boinc_lockfile
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc      2525 Jun  3 10:39 pandaJob.out
[2025-06-03 12:19:27] -rw------- 1 boinc boinc    983735 Jun  3 10:39 agis_schedconf.cvmfs.json
[2025-06-03 12:19:27] -rw------- 1 boinc boinc   1603667 Jun  3 10:40 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:19:27] drwx------ 1 boinc boinc       368 Jun  3 10:40 pilot3
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc       529 Jun  3 12:18 boinc_task_state.xml
[2025-06-03 12:19:27] -rw------- 1 boinc boinc 177881334 Jun  3 12:18 HITS.45006595._030311.pool.root.1
[2025-06-03 12:19:27] -rw------- 1 boinc boinc      1013 Jun  3 12:18 memory_monitor_summary.json
[2025-06-03 12:19:27] -rw------- 1 boinc boinc    222313 Jun  3 12:18 log.45006595._030311.job.log.tgz.1
[2025-06-03 12:19:27] -rw------- 1 boinc boinc        95 Jun  3 12:18 pilot_heartbeat.json
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc        27 Jun  3 12:19 wrapper_checkpoint.txt
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc      8192 Jun  3 12:19 boinc_mmap_file
[2025-06-03 12:19:27] -rw------- 1 boinc boinc      7641 Jun  3 12:19 heartbeat.json
[2025-06-03 12:19:27] -rw------- 1 boinc boinc      4550 Jun  3 12:19 pilotlog.txt
[2025-06-03 12:19:27] -rw------- 1 boinc boinc    583563 Jun  3 12:19 log.45006595._030311.job.log.1
[2025-06-03 12:19:27] -rw------- 1 boinc boinc       357 Jun  3 12:19 output.list
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc       620 Jun  3 12:19 runtime_log
[2025-06-03 12:19:27] -rw------- 1 boinc boinc    829440 Jun  3 12:19 result.tar.gz
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc      8665 Jun  3 12:19 runtime_log.err
[2025-06-03 12:19:27] -rw------- 1 boinc boinc       645 Jun  3 12:19 aIXLDmYpeg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNijKDmHbOoem.diag
[2025-06-03 12:19:27] -rw-r--r-- 1 boinc boinc     22457 Jun  3 12:19 stderr.txt
[2025-06-03 12:19:27] HITS file was successfully produced:
[2025-06-03 12:19:27] -rw------- 1 boinc boinc 177881334 Jun  3 12:18 shared/HITS.pool.root.1
[2025-06-03 12:19:27]  *** Contents of shared directory: ***
[2025-06-03 12:19:27] total 385904
[2025-06-03 12:19:27] -rw-r--r-- 2 boinc boinc 215917674 Jun  3 10:39 ATLAS.root_0
[2025-06-03 12:19:27] -rw-r--r-- 2 boinc boinc    508879 Jun  3 10:39 input.tar.gz
[2025-06-03 12:19:27] -rw-r--r-- 2 boinc boinc     15093 Jun  3 10:39 start_atlas.sh
[2025-06-03 12:19:27] -rw------- 1 boinc boinc 177881334 Jun  3 12:18 HITS.pool.root.1
[2025-06-03 12:19:27] -rw------- 1 boinc boinc    829440 Jun  3 12:19 result.tar.gz
12:19:29 (1083664): run_atlas exited; CPU time 11661.232011
12:19:29 (1083664): called boinc_finish(0)

</stderr_txt>
]]>

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