Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:54:31 (3184766): wrapper (7.7.26015): starting
09:54:31 (3184766): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:54:31] Arguments: --nthreads 8
[2025-06-03 09:54:31] Threads: 8
[2025-06-03 09:54:31] Checking for CVMFS
[2025-06-03 09:54:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:54:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:54:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:54:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:54:31] 2.12.6.0 1132244 21944 161736 146743 3 197 25362052 40960000 9749 16776704 0 259055592 99.769 158967587 36642 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 09:54:31] CVMFS is ok
[2025-06-03 09:54:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:54:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:54:31] Further information can be found at the LHC@home message board.
[2025-06-03 09:54:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:54:31] Checking for apptainer binary...
[2025-06-03 09:54:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:54:31] Running /usr/bin/apptainer --version
[2025-06-03 09:54:31] apptainer version 1.4.1-1.el9
[2025-06-03 09:54:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:54:32] c8-7-3.aglt2.org
[2025-06-03 09:54:32] apptainer works
[2025-06-03 09:54:32] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:54:32] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:54:32] Starting ATLAS job with PandaID=6677548507
[2025-06-03 09:54:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:43:39]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:43:39]  status_code=0
[2025-06-03 10:43:39]  storage_token=
[2025-06-03 10:43:39]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677548507/log.45006595._026294.job.log.tgz.1
[2025-06-03 10:43:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/e9/log.45006595._026294.job.log.tgz.1
[2025-06-03 10:43:39]  workdir=None
[2025-06-03 10:43:39] ]
[2025-06-03 10:43:39] 2025-06-03 14:43:01,493 | INFO     | transferring file log.45006595._026294.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677548507/log.45006595._026294.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 10:43:39] 2025-06-03 14:43:01,494 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677548507/log.45006595._026294.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._026294.job
[2025-06-03 10:43:39] 2025-06-03 14:43:01,509 | INFO     | adding to output.list: log.45006595._026294.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/e9/log.45006595._026294.job.log.tg
[2025-06-03 10:43:39] 2025-06-03 14:43:01,510 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 10:43:39] 2025-06-03 14:43:01,510 | INFO     | summary of transferred files:
[2025-06-03 10:43:39] 2025-06-03 14:43:01,510 | INFO     |  -- lfn=log.45006595._026294.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 10:43:39] 2025-06-03 14:43:01,510 | INFO     | stage-out finished correctly
[2025-06-03 10:43:39] 2025-06-03 14:43:02,452 | WARNING  | process 3216459 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 10:43:39] 2025-06-03 14:43:02,452 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677548507/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:43:39] 2025-06-03 14:43:02,453 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677548507/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:43:39] 2025-06-03 14:43:02,454 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2821959 B
[2025-06-03 10:43:39] 2025-06-03 14:43:02,454 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16259 B
[2025-06-03 10:43:39] 2025-06-03 14:43:02,454 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 10:43:39] 2025-06-03 14:43:02,467 | INFO     | sufficient remaining disk space (164875993088 B)
[2025-06-03 10:43:39] 2025-06-03 14:43:02,467 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-03 10:43:39] 2025-06-03 14:43:02,468 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6677548507: 3109314 B (within 2537553920 B limit)
[2025-06-03 10:43:39] 2025-06-03 14:43:02,468 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6677548507/HITS.45006595._026294.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 10:43:39] 2025-06-03 14:43:02,468 | INFO     | total size of present files: 0 B (workdir size: 3109314 B)
[2025-06-03 10:43:39] 2025-06-03 14:43:02,468 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6677548507/HITS.45006595._026294.pool.root.1 since it does not exist
[2025-06-03 10:43:39] 2025-06-03 14:43:02,871 | INFO     | number of running child processes to parent process 3216459: 1
[2025-06-03 10:43:39] 2025-06-03 14:43:02,872 | INFO     | maximum number of monitored processes: 6
[2025-06-03 10:43:39] 2025-06-03 14:43:03,034 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 10:43:39] 2025-06-03 14:43:03,095 | INFO     | job 6677548507 has state=finished
[2025-06-03 10:43:39] 2025-06-03 14:43:03,095 | INFO     | preparing for final server update for job 6677548507 in state='finished'
[2025-06-03 10:43:39] 2025-06-03 14:43:03,095 | INFO     | this job has now completed (state=finished)
[2025-06-03 10:43:39] 2025-06-03 14:43:03,096 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 10:43:39] 2025-06-03 14:43:03,096 | INFO     | log transfer has been attempted: DONE
[2025-06-03 10:43:39] 2025-06-03 14:43:03,096 | INFO     | job 6677548507 has finished - writing final server update
[2025-06-03 10:43:39] 2025-06-03 14:43:03,096 | INFO     | total number of processed events: 400 (read)
[2025-06-03 10:43:39] 2025-06-03 14:43:03,113 | INFO     | executing command: lscpu
[2025-06-03 10:43:39] 2025-06-03 14:43:03,195 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 10:43:39] 2025-06-03 14:43:05,374 | INFO     | monitor loop #214: job 0:6677548507 is in state 'finished'
[2025-06-03 10:43:39] 2025-06-03 14:43:05,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 10:43:39] 2025-06-03 14:43:06,341 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 10:43:39] 2025-06-03 14:43:06,342 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677548507/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:43:39] 2025-06-03 14:43:06,342 | INFO     | extracted standard info from prmon json
[2025-06-03 10:43:39] 2025-06-03 14:43:06,342 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:43:39] 2025-06-03 14:43:06,342 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:43:39] 2025-06-03 14:43:06,342 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:43:39] 2025-06-03 14:43:06,342 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | sum of square deviations: 21358540.0
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | sum of deviations: 4673385741.0
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | mean x: 1748960429.0
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | mean y: 2075219.8048780488
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | -- intersect: -382681700471.8783
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | intersect: -382681700471.8783
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | chi2: 0.7154817825244278
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | -- intersect: -382681700471.8783
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | current memory leak: 218.81 B/s (using 41 data points, chi2=0.72)
[2025-06-03 10:43:39] 2025-06-03 14:43:06,343 | INFO     | ..............................
[2025-06-03 10:43:39] 2025-06-03 14:43:06,344 | INFO     | . Timing measurements:
[2025-06-03 10:43:39] 2025-06-03 14:43:06,344 | INFO     | . get job = 0 s
[2025-06-03 10:43:39] 2025-06-03 14:43:06,344 | INFO     | . initial setup = 2 s
[2025-06-03 10:43:39] 2025-06-03 14:43:06,344 | INFO     | . payload setup = 4 s
[2025-06-03 10:43:39] 2025-06-03 14:43:06,344 | INFO     | . stage-in = 0 s
[2025-06-03 10:43:39] 2025-06-03 14:43:06,344 | INFO     | . payload execution = 2877 s
[2025-06-03 10:43:39] 2025-06-03 14:43:06,344 | INFO     | . stage-out = 0 s
[2025-06-03 10:43:39] 2025-06-03 14:43:06,344 | INFO     | . log creation = 0 s
[2025-06-03 10:43:39] 2025-06-03 14:43:06,344 | INFO     | ..............................
[2025-06-03 10:43:39] 2025-06-03 14:43:06,375 | INFO     | 
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | job summary report
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | --------------------------------------------------
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | PanDA job id: 6677548507
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | task id: 45006595
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | errors: (none)
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | pilot state: finished 
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | transexitcode: 0
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | exeerrorcode: 0
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | exeerrordiag: 
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | exitcode: 0
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | exitmsg: OK
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | cpuconsumptiontime: 18642 s
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | nevents: 400
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | neventsw: 0
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | pid: 3216459
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | pgrp: 3216459
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | corecount: 8
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | event service: False
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | sizes: {0: 2405178, 3: 2405384, 11: 2405412, 2886: 2430713, 2887: 2439654, 2888: 2439738, 2891: 2440036}
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | --------------------------------------------------
[2025-06-03 10:43:39] 2025-06-03 14:43:06,376 | INFO     | 
[2025-06-03 10:43:39] 2025-06-03 14:43:06,377 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,391 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:43:39] 2025-06-03 14:43:06,392 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,392 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:43:39] 2025-06-03 14:43:06,392 | INFO     | job 6677548507 has completed (purged errors)
[2025-06-03 10:43:39] 2025-06-03 14:43:06,392 | INFO     | overall cleanup function is called
[2025-06-03 10:43:39] 2025-06-03 14:43:07,399 | INFO     | --- collectZombieJob: --- 10, [3216459]
[2025-06-03 10:43:39] 2025-06-03 14:43:07,399 | INFO     | zombie collector waiting for pid 3216459
[2025-06-03 10:43:39] 2025-06-03 14:43:07,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:43:39] 2025-06-03 14:43:07,399 | INFO     | collected zombie processes
[2025-06-03 10:43:39] 2025-06-03 14:43:07,399 | INFO     | will attempt to kill all subprocesses of pid=3216459
[2025-06-03 10:43:39] 2025-06-03 14:43:07,798 | INFO     | process IDs to be killed: [3216459] (in reverse order)
[2025-06-03 10:43:39] 2025-06-03 14:43:07,933 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:43:39] 2025-06-03 14:43:07,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:43:39] 2025-06-03 14:43:07,948 | INFO     | did not find any defunct processes belonging to 3216459
[2025-06-03 10:43:39] 2025-06-03 14:43:07,957 | INFO     | did not find any defunct processes belonging to 3216459
[2025-06-03 10:43:39] 2025-06-03 14:43:07,957 | INFO     | ready for new job
[2025-06-03 10:43:39] 2025-06-03 14:43:07,957 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:43:39] 2025-06-03 14:43:07,958 | INFO     | **************************************
[2025-06-03 10:43:39] 2025-06-03 14:43:07,958 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:43:39] 2025-06-03 14:43:07,958 | INFO     | **************************************
[2025-06-03 10:43:39] 2025-06-03 14:43:07,958 | INFO     | 
[2025-06-03 10:43:39] 2025-06-03 14:43:07,973 | INFO     | architecture information:
[2025-06-03 10:43:39] 2025-06-03 14:43:07,973 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:43:39] 2025-06-03 14:43:07,986 | INFO     | cat /etc/os-release:
[2025-06-03 10:43:39] NAME="CentOS Linux"
[2025-06-03 10:43:39] VERSION="7 (Core)"
[2025-06-03 10:43:39] ID="centos"
[2025-06-03 10:43:39] ID_LIKE="rhel fedora"
[2025-06-03 10:43:39] VERSION_ID="7"
[2025-06-03 10:43:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:43:39] ANSI_COLOR="0;31"
[2025-06-03 10:43:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:43:39] HOME_URL="https://www.centos.org/"
[2025-06-03 10:43:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:43:39] 
[2025-06-03 10:43:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:43:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:43:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:43:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:43:39] 
[2025-06-03 10:43:39] 2025-06-03 14:43:07,987 | INFO     | **************************************
[2025-06-03 10:43:39] 2025-06-03 14:43:08,489 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 10:43:39] 2025-06-03 14:43:08,498 | INFO     | sufficient remaining disk space (164877041664 B)
[2025-06-03 10:43:39] 2025-06-03 14:43:08,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:43:39] 2025-06-03 14:43:08,498 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:43:39] 2025-06-03 14:43:08,498 | INFO     | update_server=False
[2025-06-03 10:43:39] 2025-06-03 14:43:08,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:43:39] 2025-06-03 14:43:08,498 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 10:43:39] 2025-06-03 14:43:08,499 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:43:39] 2025-06-03 14:43:08,499 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:43:39] 2025-06-03 14:43:08,499 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:43:39] 2025-06-03 14:43:08,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:43:39] 2025-06-03 14:43:08,882 | INFO     | aborting loop
[2025-06-03 10:43:39] 2025-06-03 14:43:09,008 | INFO     | all data control threads have been joined
[2025-06-03 10:43:39] 2025-06-03 14:43:09,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:43:39] 2025-06-03 14:43:09,147 | INFO     | all payload control threads have been joined
[2025-06-03 10:43:39] 2025-06-03 14:43:09,502 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:09,552 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:09,567 | INFO     | [job] validate thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:09,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:43:39] 2025-06-03 14:43:09,687 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:09,691 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:09,858 | INFO     | all job control threads have been joined
[2025-06-03 10:43:39] 2025-06-03 14:43:09,888 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:10,013 | INFO     | [data] control thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:10,079 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:10,127 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:10,152 | INFO     | [payload] control thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:10,863 | INFO     | [job] control thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:10,898 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:11,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:43:39] 2025-06-03 14:43:11,589 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:12,392 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:13,100 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:19,391 | INFO     | job.realtimelogging is not enabled
[2025-06-03 10:43:39] 2025-06-03 14:43:20,396 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:43:39] 2025-06-03 14:43:21,304 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131903731520)>', '<ExcThread(monitor, started 140131277199104)>']
[2025-06-03 10:43:39] 2025-06-03 14:43:21,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:43:39] 2025-06-03 14:43:21,560 | INFO     | [monitor] control thread has ended
[2025-06-03 10:43:39] 2025-06-03 14:43:26,323 | INFO     | all workflow threads have been joined
[2025-06-03 10:43:39] 2025-06-03 14:43:26,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:43:39] 2025-06-03 14:43:26,324 | INFO     | traces error code: 0
[2025-06-03 10:43:39] 2025-06-03 14:43:26,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:43:39] 2025-06-03 14:43:26,402 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:43:39] 2025-06-03 14:43:26,405 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:43:39] 2025-06-03 14:43:26,407 [wrapper] pilotpid: 3196207
[2025-06-03 10:43:39] 2025-06-03 14:43:26,410 [wrapper] Pilot exit status: 0
[2025-06-03 10:43:39] 2025-06-03 14:43:26,418 [wrapper] pandaids: 6677548507
[2025-06-03 10:43:39] 2025-06-03 14:43:26,513 [wrapper] cleanup supervisor_pilot 3686243 3196209
[2025-06-03 10:43:39] 2025-06-03 14:43:26,516 [wrapper] Test setup, not cleaning
[2025-06-03 10:43:39] 2025-06-03 14:43:26,519 [wrapper] apfmon messages muted
[2025-06-03 10:43:39] 2025-06-03 14:43:26,521 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:43:39] 2025-06-03 14:43:26,524 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:43:39]  *** Error codes and diagnostics ***
[2025-06-03 10:43:39]     "exeErrorCode": 0,
[2025-06-03 10:43:39]     "exeErrorDiag": "",
[2025-06-03 10:43:39]     "pilotErrorCode": 0,
[2025-06-03 10:43:39]     "pilotErrorDiag": "",
[2025-06-03 10:43:39]  *** Listing of results directory ***
[2025-06-03 10:43:39] total 395260
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 04:43 pilot3.tar.gz
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 04:51 queuedata.json
[2025-06-03 10:43:39] -rwx------. 1 boincer umatlas     37140 Jun  3 04:52 runpilot2-wrapper.sh
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas       100 Jun  3 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:43:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 09:54 run_atlas
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas       105 Jun  3 09:54 job.xml
[2025-06-03 10:43:39] -rw-r--r--. 2 boincer umatlas 216156976 Jun  3 09:54 EVNT.45006593._001052.pool.root.1
[2025-06-03 10:43:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:54 start_atlas.sh
[2025-06-03 10:43:39] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 09:54 shared
[2025-06-03 10:43:39] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 09:54 input.tar.gz
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas         0 Jun  3 09:54 boinc_lockfile
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas      2522 Jun  3 09:54 pandaJob.out
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas    982724 Jun  3 09:54 agis_schedconf.cvmfs.json
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas   1603667 Jun  3 09:54 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:43:39] drwx------. 4 boincer umatlas      4096 Jun  3 09:54 pilot3
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas      7161 Jun  3 10:39 init_data.xml
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas 183605126 Jun  3 10:42 HITS.45006595._026294.pool.root.1
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas        95 Jun  3 10:42 pilot_heartbeat.json
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas       529 Jun  3 10:42 boinc_task_state.xml
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas      1028 Jun  3 10:42 memory_monitor_summary.json
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas    272822 Jun  3 10:43 log.45006595._026294.job.log.tgz.1
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas      7678 Jun  3 10:43 heartbeat.json
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas      4549 Jun  3 10:43 pilotlog.txt
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas    306170 Jun  3 10:43 log.45006595._026294.job.log.1
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas       357 Jun  3 10:43 output.list
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas       620 Jun  3 10:43 runtime_log
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas    593920 Jun  3 10:43 result.tar.gz
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas       649 Jun  3 10:43 UWHLDmmYcg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU2iKDmTtAmmm.diag
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 10:43 runtime_log.err
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas        27 Jun  3 10:43 wrapper_checkpoint.txt
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 10:43 boinc_mmap_file
[2025-06-03 10:43:39] -rw-r--r--. 1 boincer umatlas     22311 Jun  3 10:43 stderr.txt
[2025-06-03 10:43:39] HITS file was successfully produced:
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas 183605126 Jun  3 10:42 shared/HITS.pool.root.1
[2025-06-03 10:43:39]  *** Contents of shared directory: ***
[2025-06-03 10:43:39] total 391500
[2025-06-03 10:43:39] -rw-r--r--. 2 boincer umatlas 216156976 Jun  3 09:54 ATLAS.root_0
[2025-06-03 10:43:39] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:54 start_atlas.sh
[2025-06-03 10:43:39] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 09:54 input.tar.gz
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas 183605126 Jun  3 10:42 HITS.pool.root.1
[2025-06-03 10:43:39] -rw-------. 1 boincer umatlas    593920 Jun  3 10:43 result.tar.gz
10:43:40 (3184766): run_atlas exited; CPU time 18719.268809
10:43:40 (3184766): called boinc_finish(0)

</stderr_txt>
]]>

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