Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:58:08 (16394): wrapper (7.7.26015): starting
09:58:08 (16394): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:58:08] Arguments: --nthreads 8
[2025-06-03 09:58:08] Threads: 8
[2025-06-03 09:58:08] Checking for CVMFS
[2025-06-03 09:58:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:58:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:58:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:58:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:58:09] 2.11.2.0 2931 34284 76560 146743 3 56 16756829 20275200 1 130560 0 10379931 99.974 6306661 7761 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 09:58:09] CVMFS is ok
[2025-06-03 09:58:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:58:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:58:09] Further information can be found at the LHC@home message board.
[2025-06-03 09:58:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:58:09] Checking for apptainer binary...
[2025-06-03 09:58:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:58:09] Running /usr/bin/apptainer --version
[2025-06-03 09:58:09] apptainer version 1.3.2-1.el7
[2025-06-03 09:58:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:58:10] c-115-5.aglt2.org
[2025-06-03 09:58:10] apptainer works
[2025-06-03 09:58:10] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:58:10] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:58:10] Starting ATLAS job with PandaID=6677580105
[2025-06-03 09:58:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:37:30]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:37:30]  filetype=log
[2025-06-03 11:37:30]  guid=57175a04-70e0-41aa-a948-d7eeed3b596d
[2025-06-03 11:37:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 11:37:30]  is_altstaged=None
[2025-06-03 11:37:30]  is_tar=False
[2025-06-03 11:37:30]  lfn=log.45006595._030084.job.log.tgz.1
[2025-06-03 11:37:30]  mtime=0
[2025-06-03 11:37:30]  protocol_id=None
[2025-06-03 11:37:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 11:37:30]  replicas=None
[2025-06-03 11:37:30]  scope=mc23_13p6TeV
[2025-06-03 11:37:30]  status=None
[2025-06-03 11:37:30]  status_code=0
[2025-06-03 11:37:30]  storage_token=
[2025-06-03 11:37:30]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677580105/log.45006595._030084.job.log.tgz.1
[2025-06-03 11:37:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/6e/log.45006595._030084.job.log.tgz.1
[2025-06-03 11:37:30]  workdir=None
[2025-06-03 11:37:30] ]
[2025-06-03 11:37:30] 2025-06-03 15:37:03,704 | INFO     | transferring file log.45006595._030084.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677580105/log.45006595._030084.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 11:37:30] 2025-06-03 15:37:03,705 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677580105/log.45006595._030084.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._030084.job
[2025-06-03 11:37:30] 2025-06-03 15:37:03,731 | INFO     | adding to output.list: log.45006595._030084.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/6e/log.45006595._030084.job.log.tg
[2025-06-03 11:37:30] 2025-06-03 15:37:03,733 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 11:37:30] 2025-06-03 15:37:03,733 | INFO     | summary of transferred files:
[2025-06-03 11:37:30] 2025-06-03 15:37:03,733 | INFO     |  -- lfn=log.45006595._030084.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 11:37:30] 2025-06-03 15:37:03,734 | INFO     | stage-out finished correctly
[2025-06-03 11:37:30] 2025-06-03 15:37:05,492 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 11:37:30] 2025-06-03 15:37:05,574 | INFO     | job 6677580105 has state=finished
[2025-06-03 11:37:30] 2025-06-03 15:37:05,574 | INFO     | preparing for final server update for job 6677580105 in state='finished'
[2025-06-03 11:37:30] 2025-06-03 15:37:05,575 | INFO     | this job has now completed (state=finished)
[2025-06-03 11:37:30] 2025-06-03 15:37:05,575 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 11:37:30] 2025-06-03 15:37:05,575 | INFO     | log transfer has been attempted: DONE
[2025-06-03 11:37:30] 2025-06-03 15:37:05,576 | INFO     | job 6677580105 has finished - writing final server update
[2025-06-03 11:37:30] 2025-06-03 15:37:05,576 | INFO     | total number of processed events: 400 (read)
[2025-06-03 11:37:30] 2025-06-03 15:37:05,577 | INFO     | executing command: lscpu
[2025-06-03 11:37:30] 2025-06-03 15:37:05,605 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 11:37:30] 2025-06-03 15:37:06,157 | INFO     | monitor loop #440: job 0:6677580105 is in state 'finished'
[2025-06-03 11:37:30] 2025-06-03 15:37:06,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:37:30] 2025-06-03 15:37:08,661 | INFO     | monitor loop #441: job 0:6677580105 is in state 'finished'
[2025-06-03 11:37:30] 2025-06-03 15:37:08,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:37:30] 2025-06-03 15:37:10,973 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 11:37:30] 2025-06-03 15:37:10,973 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677580105/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:37:30] 2025-06-03 15:37:10,975 | INFO     | extracted standard info from prmon json
[2025-06-03 11:37:30] 2025-06-03 15:37:10,975 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:37:30] 2025-06-03 15:37:10,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:37:30] 2025-06-03 15:37:10,975 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:37:30] 2025-06-03 15:37:10,975 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:37:30] 2025-06-03 15:37:10,978 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:37:30] 2025-06-03 15:37:10,978 | INFO     | sum of square deviations: 226022842.5
[2025-06-03 11:37:30] 2025-06-03 15:37:10,978 | INFO     | sum of deviations: -1604694822.4999998
[2025-06-03 11:37:30] 2025-06-03 15:37:10,979 | INFO     | mean x: 1748962158.5
[2025-06-03 11:37:30] 2025-06-03 15:37:10,979 | INFO     | mean y: 2508386.277777778
[2025-06-03 11:37:30] 2025-06-03 15:37:10,979 | INFO     | -- intersect: 12419618486.525164
[2025-06-03 11:37:30] 2025-06-03 15:37:10,979 | INFO     | intersect: 12419618486.525164
[2025-06-03 11:37:30] 2025-06-03 15:37:10,979 | INFO     | chi2: 0.006212186066820763
[2025-06-03 11:37:30] 2025-06-03 15:37:10,979 | INFO     | -- intersect: 12419618486.525164
[2025-06-03 11:37:30] 2025-06-03 15:37:10,980 | INFO     | current memory leak: -7.10 B/s (using 90 data points, chi2=0.01)
[2025-06-03 11:37:30] 2025-06-03 15:37:10,980 | INFO     | ..............................
[2025-06-03 11:37:30] 2025-06-03 15:37:10,980 | INFO     | . Timing measurements:
[2025-06-03 11:37:30] 2025-06-03 15:37:10,980 | INFO     | . get job = 0 s
[2025-06-03 11:37:30] 2025-06-03 15:37:10,980 | INFO     | . initial setup = 2 s
[2025-06-03 11:37:30] 2025-06-03 15:37:10,981 | INFO     | . payload setup = 11 s
[2025-06-03 11:37:30] 2025-06-03 15:37:10,981 | INFO     | . stage-in = 0 s
[2025-06-03 11:37:30] 2025-06-03 15:37:10,981 | INFO     | . payload execution = 5885 s
[2025-06-03 11:37:30] 2025-06-03 15:37:10,981 | INFO     | . stage-out = 0 s
[2025-06-03 11:37:30] 2025-06-03 15:37:10,981 | INFO     | . log creation = 0 s
[2025-06-03 11:37:30] 2025-06-03 15:37:10,981 | INFO     | ..............................
[2025-06-03 11:37:30] 2025-06-03 15:37:11,067 | INFO     | 
[2025-06-03 11:37:30] 2025-06-03 15:37:11,068 | INFO     | job summary report
[2025-06-03 11:37:30] 2025-06-03 15:37:11,068 | INFO     | --------------------------------------------------
[2025-06-03 11:37:30] 2025-06-03 15:37:11,068 | INFO     | PanDA job id: 6677580105
[2025-06-03 11:37:30] 2025-06-03 15:37:11,068 | INFO     | task id: 45006595
[2025-06-03 11:37:30] 2025-06-03 15:37:11,068 | INFO     | errors: (none)
[2025-06-03 11:37:30] 2025-06-03 15:37:11,069 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:37:30] 2025-06-03 15:37:11,069 | INFO     | pilot state: finished 
[2025-06-03 11:37:30] 2025-06-03 15:37:11,069 | INFO     | transexitcode: 0
[2025-06-03 11:37:30] 2025-06-03 15:37:11,069 | INFO     | exeerrorcode: 0
[2025-06-03 11:37:30] 2025-06-03 15:37:11,069 | INFO     | exeerrordiag: 
[2025-06-03 11:37:30] 2025-06-03 15:37:11,069 | INFO     | exitcode: 0
[2025-06-03 11:37:30] 2025-06-03 15:37:11,070 | INFO     | exitmsg: OK
[2025-06-03 11:37:30] 2025-06-03 15:37:11,070 | INFO     | cpuconsumptiontime: 44267 s
[2025-06-03 11:37:30] 2025-06-03 15:37:11,070 | INFO     | nevents: 400
[2025-06-03 11:37:30] 2025-06-03 15:37:11,070 | INFO     | neventsw: 0
[2025-06-03 11:37:30] 2025-06-03 15:37:11,070 | INFO     | pid: 26492
[2025-06-03 11:37:30] 2025-06-03 15:37:11,071 | INFO     | pgrp: 26492
[2025-06-03 11:37:30] 2025-06-03 15:37:11,071 | INFO     | corecount: 8
[2025-06-03 11:37:30] 2025-06-03 15:37:11,071 | INFO     | event service: False
[2025-06-03 11:37:30] 2025-06-03 15:37:11,071 | INFO     | sizes: {0: 2405184, 6: 2405390, 11: 2405418, 5900: 2431966, 5901: 2440907, 5903: 2440963, 5908: 2441261}
[2025-06-03 11:37:30] 2025-06-03 15:37:11,071 | INFO     | --------------------------------------------------
[2025-06-03 11:37:30] 2025-06-03 15:37:11,071 | INFO     | 
[2025-06-03 11:37:30] 2025-06-03 15:37:11,072 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 11:37:30] 2025-06-03 15:37:11,101 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,101 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,101 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,102 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,102 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,103 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:37:30] 2025-06-03 15:37:11,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:37:30] 2025-06-03 15:37:11,104 | INFO     | job 6677580105 has completed (purged errors)
[2025-06-03 11:37:30] 2025-06-03 15:37:11,105 | INFO     | overall cleanup function is called
[2025-06-03 11:37:30] 2025-06-03 15:37:12,113 | INFO     | --- collectZombieJob: --- 10, [26492]
[2025-06-03 11:37:30] 2025-06-03 15:37:12,113 | INFO     | zombie collector waiting for pid 26492
[2025-06-03 11:37:30] 2025-06-03 15:37:12,113 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:37:30] 2025-06-03 15:37:12,113 | INFO     | collected zombie processes
[2025-06-03 11:37:30] 2025-06-03 15:37:12,114 | INFO     | will attempt to kill all subprocesses of pid=26492
[2025-06-03 11:37:30] 2025-06-03 15:37:12,202 | INFO     | process IDs to be killed: [26492] (in reverse order)
[2025-06-03 11:37:30] 2025-06-03 15:37:12,258 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:37:30] 2025-06-03 15:37:12,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:37:30] 2025-06-03 15:37:12,264 | INFO     | did not find any defunct processes belonging to 26492
[2025-06-03 11:37:30] 2025-06-03 15:37:12,267 | INFO     | did not find any defunct processes belonging to 26492
[2025-06-03 11:37:30] 2025-06-03 15:37:12,268 | INFO     | ready for new job
[2025-06-03 11:37:30] 2025-06-03 15:37:12,268 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:37:30] 2025-06-03 15:37:12,269 | INFO     | **************************************
[2025-06-03 11:37:30] 2025-06-03 15:37:12,269 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:37:30] 2025-06-03 15:37:12,270 | INFO     | **************************************
[2025-06-03 11:37:30] 2025-06-03 15:37:12,270 | INFO     | 
[2025-06-03 11:37:30] 2025-06-03 15:37:12,270 | INFO     | architecture information:
[2025-06-03 11:37:30] 2025-06-03 15:37:12,271 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:37:30] 2025-06-03 15:37:12,288 | INFO     | cat /etc/os-release:
[2025-06-03 11:37:30] NAME="CentOS Linux"
[2025-06-03 11:37:30] VERSION="7 (Core)"
[2025-06-03 11:37:30] ID="centos"
[2025-06-03 11:37:30] ID_LIKE="rhel fedora"
[2025-06-03 11:37:30] VERSION_ID="7"
[2025-06-03 11:37:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:37:30] ANSI_COLOR="0;31"
[2025-06-03 11:37:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:37:30] HOME_URL="https://www.centos.org/"
[2025-06-03 11:37:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:37:30] 
[2025-06-03 11:37:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:37:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:37:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:37:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:37:30] 
[2025-06-03 11:37:30] 2025-06-03 15:37:12,289 | INFO     | **************************************
[2025-06-03 11:37:30] 2025-06-03 15:37:12,792 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 11:37:30] 2025-06-03 15:37:12,811 | INFO     | sufficient remaining disk space (18642632704 B)
[2025-06-03 11:37:30] 2025-06-03 15:37:12,812 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:37:30] 2025-06-03 15:37:12,812 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:37:30] 2025-06-03 15:37:12,812 | INFO     | update_server=False
[2025-06-03 11:37:30] 2025-06-03 15:37:12,813 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:37:30] 2025-06-03 15:37:12,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:37:30] 2025-06-03 15:37:12,813 | INFO     | aborting loop
[2025-06-03 11:37:30] 2025-06-03 15:37:12,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:37:30] 2025-06-03 15:37:12,814 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 11:37:30] 2025-06-03 15:37:12,814 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:37:30] 2025-06-03 15:37:12,815 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:37:30] 2025-06-03 15:37:12,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:37:30] 2025-06-03 15:37:12,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:37:30] 2025-06-03 15:37:13,488 | INFO     | all payload control threads have been joined
[2025-06-03 11:37:30] 2025-06-03 15:37:13,491 | INFO     | all job control threads have been joined
[2025-06-03 11:37:30] 2025-06-03 15:37:13,574 | INFO     | all data control threads have been joined
[2025-06-03 11:37:30] 2025-06-03 15:37:13,818 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:13,819 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:13,821 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:14,355 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:14,355 | INFO     | [job] validate thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:14,493 | INFO     | [payload] control thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:14,496 | INFO     | [job] control thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:14,497 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:14,579 | INFO     | [data] control thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:14,820 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:14,869 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:15,094 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:15,147 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:15,162 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:16,084 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:37:30] 2025-06-03 15:37:20,090 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:23,032 | INFO     | job.realtimelogging is not enabled
[2025-06-03 11:37:30] 2025-06-03 15:37:24,038 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:37:30] 2025-06-03 15:37:25,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140391882946368)>', '<ExcThread(monitor, started 140390980110080)>']
[2025-06-03 11:37:30] 2025-06-03 15:37:25,878 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:37:30] 2025-06-03 15:37:25,878 | INFO     | [monitor] control thread has ended
[2025-06-03 11:37:30] 2025-06-03 15:37:30,112 | INFO     | all workflow threads have been joined
[2025-06-03 11:37:30] 2025-06-03 15:37:30,112 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:37:30] 2025-06-03 15:37:30,113 | INFO     | traces error code: 0
[2025-06-03 11:37:30] 2025-06-03 15:37:30,113 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:37:30] 2025-06-03 15:37:30,221 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:37:30] 2025-06-03 15:37:30,226 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:37:30] 2025-06-03 15:37:30,230 [wrapper] pilotpid: 20064
[2025-06-03 11:37:30] 2025-06-03 15:37:30,235 [wrapper] Pilot exit status: 0
[2025-06-03 11:37:30] 2025-06-03 15:37:30,252 [wrapper] pandaids: 6677580105
[2025-06-03 11:37:30] 2025-06-03 15:37:30,294 [wrapper] cleanup supervisor_pilot 18083 20065
[2025-06-03 11:37:30] 2025-06-03 15:37:30,299 [wrapper] Test setup, not cleaning
[2025-06-03 11:37:30] 2025-06-03 15:37:30,304 [wrapper] apfmon messages muted
[2025-06-03 11:37:30] 2025-06-03 15:37:30,308 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:37:30] 2025-06-03 15:37:30,312 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:37:30]  *** Error codes and diagnostics ***
[2025-06-03 11:37:30]     "exeErrorCode": 0,
[2025-06-03 11:37:30]     "exeErrorDiag": "",
[2025-06-03 11:37:30]     "pilotErrorCode": 0,
[2025-06-03 11:37:30]     "pilotErrorDiag": "",
[2025-06-03 11:37:30]  *** Listing of results directory ***
[2025-06-03 11:37:30] total 387636
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 06:57 pilot3.tar.gz
[2025-06-03 11:37:30] -rwx------ 1 boincer umatlas     37140 Jun  3 07:12 runpilot2-wrapper.sh
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 07:12 queuedata.json
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas       100 Jun  3 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:37:30] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 09:58 run_atlas
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas       105 Jun  3 09:58 job.xml
[2025-06-03 11:37:30] -rw-r--r-- 2 boincer umatlas 214491351 Jun  3 09:58 EVNT.45006593._001204.pool.root.1
[2025-06-03 11:37:30] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 09:58 start_atlas.sh
[2025-06-03 11:37:30] drwxrwx--x 2 boincer umatlas      4096 Jun  3 09:58 shared
[2025-06-03 11:37:30] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 09:58 input.tar.gz
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas         0 Jun  3 09:58 boinc_lockfile
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 09:58 pandaJob.out
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas    982724 Jun  3 09:58 agis_schedconf.cvmfs.json
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas   1603667 Jun  3 09:58 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:37:30] drwx------ 4 boincer umatlas      4096 Jun  3 09:58 pilot3
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas      5824 Jun  3 11:29 init_data.xml
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas 176891404 Jun  3 11:36 HITS.45006595._030084.pool.root.1
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas        95 Jun  3 11:36 pilot_heartbeat.json
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas       529 Jun  3 11:36 boinc_task_state.xml
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas      1048 Jun  3 11:36 memory_monitor_summary.json
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas    312350 Jun  3 11:37 log.45006595._030084.job.log.tgz.1
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas      7747 Jun  3 11:37 heartbeat.json
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas        27 Jun  3 11:37 wrapper_checkpoint.txt
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 11:37 boinc_mmap_file
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas      4548 Jun  3 11:37 pilotlog.txt
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas    550360 Jun  3 11:37 log.45006595._030084.job.log.1
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas       357 Jun  3 11:37 output.list
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas       620 Jun  3 11:37 runtime_log
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas    880640 Jun  3 11:37 result.tar.gz
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas       657 Jun  3 11:37 wAeKDmWkeg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmygjKDmx6wDTn.diag
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 11:37 runtime_log.err
[2025-06-03 11:37:30] -rw-r--r-- 1 boincer umatlas     21174 Jun  3 11:37 stderr.txt
[2025-06-03 11:37:30] HITS file was successfully produced:
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas 176891404 Jun  3 11:36 shared/HITS.pool.root.1
[2025-06-03 11:37:30]  *** Contents of shared directory: ***
[2025-06-03 11:37:30] total 383596
[2025-06-03 11:37:30] -rw-r--r-- 2 boincer umatlas 214491351 Jun  3 09:58 ATLAS.root_0
[2025-06-03 11:37:30] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 09:58 start_atlas.sh
[2025-06-03 11:37:30] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 09:58 input.tar.gz
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas 176891404 Jun  3 11:36 HITS.pool.root.1
[2025-06-03 11:37:30] -rw------- 1 boincer umatlas    880640 Jun  3 11:37 result.tar.gz
11:37:32 (16394): run_atlas exited; CPU time 44212.758749
11:37:32 (16394): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN