Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:36:37 (25919): wrapper (7.7.26015): starting
03:36:37 (25919): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 03:36:37] Arguments: --nthreads 8
[2025-06-04 03:36:37] Threads: 8
[2025-06-04 03:36:37] Checking for CVMFS
[2025-06-04 03:36:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 03:36:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 03:36:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 03:36:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 03:36:40] 2.11.2.0 16537 32556 88992 146762 2 207 12820485 25165825 4395 130560 0 16544127 99.777 19403213 2118 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 03:36:40] CVMFS is ok
[2025-06-04 03:36:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 03:36:40] Checking for apptainer binary...
[2025-06-04 03:36:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 03:36:40] Running /usr/bin/apptainer --version
[2025-06-04 03:36:40] apptainer version 1.3.2-1.el7
[2025-06-04 03:36:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 03:36:42] cg-vwn365.simple-grid.lan
[2025-06-04 03:36:42] apptainer works
[2025-06-04 03:36:42] Set ATHENA_PROC_NUMBER=8
[2025-06-04 03:36:42] Set ATHENA_CORE_NUMBER=8
[2025-06-04 03:36:42] Starting ATLAS job with PandaID=6677580167
[2025-06-04 03:36:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:00:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:00:25] 2025-06-04 05:12:37,646 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6677580167/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:00:25] 2025-06-04 05:12:37,647 | INFO     | extracted standard info from prmon json
[2025-06-04 10:00:25] 2025-06-04 05:12:37,647 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:00:25] 2025-06-04 05:12:37,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:00:25] 2025-06-04 05:12:37,647 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:00:25] 2025-06-04 05:12:37,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:00:25] 2025-06-04 05:12:37,652 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:00:25] 2025-06-04 05:12:37,653 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 10:00:25] 2025-06-04 05:12:37,655 | INFO     | sum of deviations: 23900869512.99999
[2025-06-04 10:00:25] 2025-06-04 05:12:37,655 | INFO     | mean x: 1749007472.5
[2025-06-04 10:00:25] 2025-06-04 05:12:37,655 | INFO     | mean y: 2453658.4
[2025-06-04 10:00:25] 2025-06-04 05:12:37,655 | INFO     | -- intersect: -14554781769.32885
[2025-06-04 10:00:25] 2025-06-04 05:12:37,655 | INFO     | intersect: -14554781769.32885
[2025-06-04 10:00:25] 2025-06-04 05:12:37,656 | INFO     | chi2: 2.720248659220598
[2025-06-04 10:00:25] 2025-06-04 05:12:37,656 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,658 | INFO     | sum of deviations: 37471479367.0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,658 | INFO     | mean x: 1749007320.0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,658 | INFO     | mean y: 2463779.7853658535
[2025-06-04 10:00:25] 2025-06-04 05:12:37,659 | INFO     | -- intersect: -24531221713.019775
[2025-06-04 10:00:25] 2025-06-04 05:12:37,659 | INFO     | intersect: -24531221713.019775
[2025-06-04 10:00:25] 2025-06-04 05:12:37,659 | INFO     | chi2: 1.886324057650822
[2025-06-04 10:00:25] 2025-06-04 05:12:37,659 | INFO     | current chi2=1.886324057650822 (change=30.656190151701455 %)
[2025-06-04 10:00:25] 2025-06-04 05:12:37,660 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,661 | INFO     | sum of deviations: 36361625572.5
[2025-06-04 10:00:25] 2025-06-04 05:12:37,661 | INFO     | mean x: 1749007167.5
[2025-06-04 10:00:25] 2025-06-04 05:12:37,662 | INFO     | mean y: 2462892.255
[2025-06-04 10:00:25] 2025-06-04 05:12:37,662 | INFO     | -- intersect: -25635134678.26225
[2025-06-04 10:00:25] 2025-06-04 05:12:37,662 | INFO     | intersect: -25635134678.26225
[2025-06-04 10:00:25] 2025-06-04 05:12:37,662 | INFO     | chi2: 1.8877802519089766
[2025-06-04 10:00:25] 2025-06-04 05:12:37,662 | INFO     | current chi2=1.8877802519089766 (change=-0.0771974599087752 %)
[2025-06-04 10:00:25] 2025-06-04 05:12:37,662 | INFO     | right removable region: 199
[2025-06-04 10:00:25] 2025-06-04 05:12:37,663 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,664 | INFO     | sum of deviations: -15254469652.999998
[2025-06-04 10:00:25] 2025-06-04 05:12:37,665 | INFO     | mean x: 1749007625.0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,665 | INFO     | mean y: 2483219.4536585365
[2025-06-04 10:00:25] 2025-06-04 05:12:37,665 | INFO     | -- intersect: 9990037284.87961
[2025-06-04 10:00:25] 2025-06-04 05:12:37,665 | INFO     | intersect: 9990037284.87961
[2025-06-04 10:00:25] 2025-06-04 05:12:37,668 | INFO     | chi2: 0.9167098847019125
[2025-06-04 10:00:25] 2025-06-04 05:12:37,669 | INFO     | current chi2=0.9167098847019125 (change=66.30051147733799 %)
[2025-06-04 10:00:25] 2025-06-04 05:12:37,669 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,671 | INFO     | sum of deviations: -11050132950.5
[2025-06-04 10:00:25] 2025-06-04 05:12:37,671 | INFO     | mean x: 1749007777.5
[2025-06-04 10:00:25] 2025-06-04 05:12:37,671 | INFO     | mean y: 2479822.335
[2025-06-04 10:00:25] 2025-06-04 05:12:37,671 | INFO     | -- intersect: 7793632061.29961
[2025-06-04 10:00:25] 2025-06-04 05:12:37,671 | INFO     | intersect: 7793632061.29961
[2025-06-04 10:00:25] 2025-06-04 05:12:37,671 | INFO     | chi2: 0.8944503513011124
[2025-06-04 10:00:25] 2025-06-04 05:12:37,672 | INFO     | current chi2=0.8944503513011124 (change=2.4281982524971104 %)
[2025-06-04 10:00:25] 2025-06-04 05:12:37,672 | INFO     | left removable region: 20
[2025-06-04 10:00:25] 2025-06-04 05:12:37,672 | INFO     | sum of square deviations: 1778377530.0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,673 | INFO     | sum of deviations: 5201457617.000001
[2025-06-04 10:00:25] 2025-06-04 05:12:37,674 | INFO     | mean x: 1749007747.0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,674 | INFO     | mean y: 2488316.0167597765
[2025-06-04 10:00:25] 2025-06-04 05:12:37,674 | INFO     | -- intersect: -5113067584.998904
[2025-06-04 10:00:25] 2025-06-04 05:12:37,674 | INFO     | intersect: -5113067584.998904
[2025-06-04 10:00:25] 2025-06-04 05:12:37,674 | INFO     | chi2: 0.0005799340528866507
[2025-06-04 10:00:25] 2025-06-04 05:12:37,674 | INFO     | -- intersect: -5113067584.998904
[2025-06-04 10:00:25] 2025-06-04 05:12:37,675 | INFO     | current memory leak: 2.92 B/s (using 179 data points, chi2=0.00)
[2025-06-04 10:00:25] 2025-06-04 05:12:37,675 | INFO     | ..............................
[2025-06-04 10:00:25] 2025-06-04 05:12:37,676 | INFO     | . Timing measurements:
[2025-06-04 10:00:25] 2025-06-04 05:12:37,676 | INFO     | . get job = 0 s
[2025-06-04 10:00:25] 2025-06-04 05:12:37,676 | INFO     | . initial setup = 2 s
[2025-06-04 10:00:25] 2025-06-04 05:12:37,676 | INFO     | . payload setup = 14 s
[2025-06-04 10:00:25] 2025-06-04 05:12:37,680 | INFO     | . stage-in = 0 s
[2025-06-04 10:00:25] 2025-06-04 05:12:37,680 | INFO     | . payload execution = 12802 s
[2025-06-04 10:00:25] 2025-06-04 05:12:37,681 | INFO     | . stage-out = 5 s
[2025-06-04 10:00:25] 2025-06-04 05:12:37,681 | INFO     | . log creation = 1 s
[2025-06-04 10:00:25] 2025-06-04 05:12:37,681 | INFO     | ..............................
[2025-06-04 10:00:25] 2025-06-04 05:12:37,862 | INFO     | 
[2025-06-04 10:00:25] 2025-06-04 05:12:37,862 | INFO     | job summary report
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | --------------------------------------------------
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | PanDA job id: 6677580167
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | task id: 45006595
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | errors: (none)
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | pilot state: finished 
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | transexitcode: 0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | exeerrorcode: 0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | exeerrordiag: 
[2025-06-04 10:00:25] 2025-06-04 05:12:37,863 | INFO     | exitcode: 0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | exitmsg: OK
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | cpuconsumptiontime: 48753 s
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | nevents: 400
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | neventsw: 0
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | pid: 5722
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | pgrp: 5722
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | corecount: 8
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | event service: False
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | sizes: {0: 2404958, 1: 2405213, 2: 2405213, 9: 2405447, 12: 2405475, 12821: 2434623, 12822: 2434750, 12827: 2443749, 12829: 2443805, 12915: 2443975}
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | --------------------------------------------------
[2025-06-04 10:00:25] 2025-06-04 05:12:37,864 | INFO     | 
[2025-06-04 10:00:25] 2025-06-04 05:12:37,865 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-04 10:00:25] 2025-06-04 05:12:38,452 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,454 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,454 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,454 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,454 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:00:25] 2025-06-04 05:12:38,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,454 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:00:25] 2025-06-04 05:12:38,454 | INFO     | job 6677580167 has completed (purged errors)
[2025-06-04 10:00:25] 2025-06-04 05:12:38,454 | INFO     | overall cleanup function is called
[2025-06-04 10:00:25] 2025-06-04 05:12:39,463 | INFO     | --- collectZombieJob: --- 10, [5722]
[2025-06-04 10:00:25] 2025-06-04 05:12:39,463 | INFO     | zombie collector waiting for pid 5722
[2025-06-04 10:00:25] 2025-06-04 05:12:39,464 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:00:25] 2025-06-04 05:12:39,464 | INFO     | collected zombie processes
[2025-06-04 10:00:25] 2025-06-04 05:12:39,464 | INFO     | will attempt to kill all subprocesses of pid=5722
[2025-06-04 10:00:25] 2025-06-04 05:12:39,580 | INFO     | process IDs to be killed: [5722] (in reverse order)
[2025-06-04 10:00:25] 2025-06-04 05:12:40,198 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:00:25] 2025-06-04 05:12:40,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:00:25] 2025-06-04 05:12:40,202 | INFO     | did not find any defunct processes belonging to 5722
[2025-06-04 10:00:25] 2025-06-04 05:12:40,205 | INFO     | did not find any defunct processes belonging to 5722
[2025-06-04 10:00:25] 2025-06-04 05:12:40,205 | INFO     | ready for new job
[2025-06-04 10:00:25] 2025-06-04 05:12:40,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:00:25] 2025-06-04 05:12:40,207 | INFO     | **************************************
[2025-06-04 10:00:25] 2025-06-04 05:12:40,208 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:00:25] 2025-06-04 05:12:40,208 | INFO     | **************************************
[2025-06-04 10:00:25] 2025-06-04 05:12:40,208 | INFO     | 
[2025-06-04 10:00:25] 2025-06-04 05:12:40,217 | INFO     | pilot is running in a VM
[2025-06-04 10:00:25] 2025-06-04 05:12:40,217 | INFO     | architecture information:
[2025-06-04 10:00:25] 2025-06-04 05:12:40,236 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:00:25] 2025-06-04 05:12:40,514 | INFO     | cat /etc/os-release:
[2025-06-04 10:00:25] NAME="CentOS Linux"
[2025-06-04 10:00:25] VERSION="7 (Core)"
[2025-06-04 10:00:25] ID="centos"
[2025-06-04 10:00:25] ID_LIKE="rhel fedora"
[2025-06-04 10:00:25] VERSION_ID="7"
[2025-06-04 10:00:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:00:25] ANSI_COLOR="0;31"
[2025-06-04 10:00:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:00:25] HOME_URL="https://www.centos.org/"
[2025-06-04 10:00:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:00:25] 
[2025-06-04 10:00:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:00:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:00:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:00:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:00:25] 
[2025-06-04 10:00:25] 2025-06-04 05:12:40,514 | INFO     | **************************************
[2025-06-04 10:00:25] 2025-06-04 05:12:41,018 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-04 10:00:25] 2025-06-04 05:12:41,176 | INFO     | sufficient remaining disk space (496564699136 B)
[2025-06-04 10:00:25] 2025-06-04 05:12:41,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:00:25] 2025-06-04 05:12:41,177 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:00:25] 2025-06-04 05:12:41,177 | INFO     | update_server=False
[2025-06-04 10:00:25] 2025-06-04 05:12:41,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:00:25] 2025-06-04 05:12:41,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:00:25] 2025-06-04 05:12:41,178 | INFO     | aborting loop
[2025-06-04 10:00:25] 2025-06-04 05:12:41,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:00:25] 2025-06-04 05:12:41,396 | INFO     | all job control threads have been joined
[2025-06-04 10:00:25] 2025-06-04 05:12:41,507 | INFO     | all data control threads have been joined
[2025-06-04 10:00:25] 2025-06-04 05:12:41,523 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:00:25] 2025-06-04 05:12:41,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:00:25] 2025-06-04 05:12:41,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:00:25] 2025-06-04 05:12:41,971 | INFO     | all payload control threads have been joined
[2025-06-04 10:00:25] 2025-06-04 05:12:42,183 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,184 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,257 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,360 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,402 | INFO     | [job] control thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,513 | INFO     | [data] control thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,592 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:00:25] 2025-06-04 05:12:42,852 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,874 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,907 | INFO     | [job] validate thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:42,977 | INFO     | [payload] control thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:43,003 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:43,161 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:43,185 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:43,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:00:25] 2025-06-04 05:12:43,831 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:47,724 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:00:25] 2025-06-04 05:12:48,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590945511232)>', '<ExcThread(monitor, started 140590486370048)>']
[2025-06-04 10:00:25] 2025-06-04 05:12:49,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:00:25] 2025-06-04 05:12:49,571 | INFO     | [monitor] control thread has ended
[2025-06-04 10:00:25] 2025-06-04 05:12:53,988 | INFO     | all workflow threads have been joined
[2025-06-04 10:00:25] 2025-06-04 05:12:53,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:00:25] 2025-06-04 05:12:53,989 | INFO     | traces error code: 0
[2025-06-04 10:00:25] 2025-06-04 05:12:53,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:00:25] 2025-06-04 05:12:54,271 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:00:25] 2025-06-04 05:12:54,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:00:25] 2025-06-04 05:12:54,405 [wrapper] pilotpid: 29623
[2025-06-04 10:00:25] 2025-06-04 05:12:54,436 [wrapper] Pilot exit status: 0
[2025-06-04 10:00:25] 2025-06-04 05:12:54,731 [wrapper] pandaids: 6677580167
[2025-06-04 10:00:25] 2025-06-04 05:12:55,614 [wrapper] cleanup supervisor_pilot 24887 29624
[2025-06-04 10:00:25] 2025-06-04 05:12:55,706 [wrapper] Test setup, not cleaning
[2025-06-04 10:00:25] 2025-06-04 05:12:55,800 [wrapper] apfmon messages muted
[2025-06-04 10:00:25] 2025-06-04 05:12:55,909 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:00:25] 2025-06-04 05:12:55,997 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:00:25]  *** Error codes and diagnostics ***
[2025-06-04 10:00:25]     "exeErrorCode": 0,
[2025-06-04 10:00:25]     "exeErrorDiag": "",
[2025-06-04 10:00:25]     "pilotErrorCode": 0,
[2025-06-04 10:00:25]     "pilotErrorDiag": "",
[2025-06-04 10:00:25]  *** Listing of results directory ***
[2025-06-04 10:00:25] total 391252
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc    495897 Jun  3 12:57 pilot3.tar.gz
[2025-06-04 10:00:25] -rwx------. 1 boinc boinc     37140 Jun  3 13:12 runpilot2-wrapper.sh
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:12 queuedata.json
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc       100 Jun  4 03:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:00:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 03:36 run_atlas
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc       105 Jun  4 03:36 job.xml
[2025-06-04 10:00:25] -rw-r--r--. 2 boinc boinc 217236457 Jun  4 03:36 EVNT.45006593._001206.pool.root.1
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc      6392 Jun  4 03:36 init_data.xml
[2025-06-04 10:00:25] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:36 start_atlas.sh
[2025-06-04 10:00:25] drwxrwx--x. 2 boinc boinc        68 Jun  4 03:36 shared
[2025-06-04 10:00:25] -rw-r--r--. 2 boinc boinc    508885 Jun  4 03:36 input.tar.gz
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc         0 Jun  4 03:36 boinc_lockfile
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc      2525 Jun  4 03:36 pandaJob.out
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc    986069 Jun  4 03:36 agis_schedconf.cvmfs.json
[2025-06-04 10:00:25] drwx------. 4 boinc boinc      4096 Jun  4 03:37 pilot3
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc 176565384 Jun  4 07:09 HITS.45006595._030146.pool.root.1
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc       531 Jun  4 07:10 boinc_task_state.xml
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc      1018 Jun  4 07:11 memory_monitor_summary.json
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc   1603667 Jun  4 07:11 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc    385516 Jun  4 07:11 log.45006595._030146.job.log.tgz.1
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc        95 Jun  4 07:12 pilot_heartbeat.json
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc      7691 Jun  4 07:12 heartbeat.json
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc      4417 Jun  4 07:12 pilotlog.txt
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc   1123233 Jun  4 07:12 log.45006595._030146.job.log.1
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc       357 Jun  4 07:12 output.list
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc       620 Jun  4 07:12 runtime_log
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc   1525760 Jun  4 07:12 result.tar.gz
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc      8673 Jun  4 07:12 runtime_log.err
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc       656 Jun  4 07:12 Km8NDm9jeg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyPYKDmmb6iwn.diag
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc      8192 Jun  4 10:00 boinc_mmap_file
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc        28 Jun  4 10:00 wrapper_checkpoint.txt
[2025-06-04 10:00:25] -rw-r--r--. 1 boinc boinc     20485 Jun  4 10:00 stderr.txt
[2025-06-04 10:00:25] HITS file was successfully produced:
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc 176565384 Jun  4 07:09 shared/HITS.pool.root.1
[2025-06-04 10:00:25]  *** Contents of shared directory: ***
[2025-06-04 10:00:25] total 386584
[2025-06-04 10:00:25] -rw-r--r--. 2 boinc boinc 217236457 Jun  4 03:36 ATLAS.root_0
[2025-06-04 10:00:25] -rw-r--r--. 2 boinc boinc     15093 Jun  4 03:36 start_atlas.sh
[2025-06-04 10:00:25] -rw-r--r--. 2 boinc boinc    508885 Jun  4 03:36 input.tar.gz
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc 176565384 Jun  4 07:09 HITS.pool.root.1
[2025-06-04 10:00:25] -rw-------. 1 boinc boinc   1525760 Jun  4 07:12 result.tar.gz
10:00:27 (25919): run_atlas exited; CPU time 48922.148876
10:00:27 (25919): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN