Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:30:40 (3063894): wrapper (7.7.26015): starting
08:30:40 (3063894): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 08:30:40] Arguments: --nthreads 4
[2025-06-05 08:30:40] Threads: 4
[2025-06-05 08:30:40] Checking for CVMFS
[2025-06-05 08:30:40] No cvmfs_config command found, will try listing directly
[2025-06-05 08:30:40] CVMFS is ok
[2025-06-05 08:30:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 08:30:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 08:30:40] Further information can be found at the LHC@home message board.
[2025-06-05 08:30:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 08:30:40] Checking for apptainer binary...
[2025-06-05 08:30:40] which: no apptainer in ((null))
[2025-06-05 08:30:40] apptainer is not installed, using version from CVMFS
[2025-06-05 08:30:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 08:30:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-05 08:30:40] apptainer works
[2025-06-05 08:30:40] Set ATHENA_PROC_NUMBER=4
[2025-06-05 08:30:40] Set ATHENA_CORE_NUMBER=4
[2025-06-05 08:30:41] Starting ATLAS job with PandaID=6677619418
[2025-06-05 08:30:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:11:03]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:11:03] 2025-06-05 09:04:31,966 | INFO     | total number of processed events: 400 (read)
[2025-06-05 11:11:03] 2025-06-05 09:04:31,970 | INFO     | executing command: lscpu
[2025-06-05 11:11:03] 2025-06-05 09:04:32,032 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 11:11:03] 2025-06-05 09:04:32,891 | INFO     | monitor loop #675: job 0:6677619418 is in state 'finished'
[2025-06-05 11:11:03] 2025-06-05 09:04:32,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:11:03] 2025-06-05 09:04:35,394 | INFO     | monitor loop #676: job 0:6677619418 is in state 'finished'
[2025-06-05 11:11:03] 2025-06-05 09:04:35,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:11:03] 2025-06-05 09:04:36,032 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 11:11:03] 2025-06-05 09:04:36,033 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6677619418/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:11:03] 2025-06-05 09:04:36,034 | INFO     | extracted standard info from prmon json
[2025-06-05 11:11:03] 2025-06-05 09:04:36,034 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:11:03] 2025-06-05 09:04:36,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:11:03] 2025-06-05 09:04:36,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:11:03] 2025-06-05 09:04:36,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:11:03] 2025-06-05 09:04:36,038 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:11:03] 2025-06-05 09:04:36,038 | INFO     | sum of square deviations: 1067554900.0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,039 | INFO     | sum of deviations: -23441550554.000004
[2025-06-05 11:11:03] 2025-06-05 09:04:36,039 | INFO     | mean x: 1749109654.0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,039 | INFO     | mean y: 2399804.6887417217
[2025-06-05 11:11:03] 2025-06-05 09:04:36,039 | INFO     | -- intersect: 38409644601.87009
[2025-06-05 11:11:03] 2025-06-05 09:04:36,039 | INFO     | intersect: 38409644601.87009
[2025-06-05 11:11:03] 2025-06-05 09:04:36,040 | INFO     | chi2: 1.8300168300626374
[2025-06-05 11:11:03] 2025-06-05 09:04:36,040 | INFO     | sum of square deviations: 964976232.5
[2025-06-05 11:11:03] 2025-06-05 09:04:36,041 | INFO     | sum of deviations: -22055901150.000008
[2025-06-05 11:11:03] 2025-06-05 09:04:36,041 | INFO     | mean x: 1749109501.5
[2025-06-05 11:11:03] 2025-06-05 09:04:36,041 | INFO     | mean y: 2401865.4246575343
[2025-06-05 11:11:03] 2025-06-05 09:04:36,041 | INFO     | -- intersect: 39980781608.17111
[2025-06-05 11:11:03] 2025-06-05 09:04:36,041 | INFO     | intersect: 39980781608.17111
[2025-06-05 11:11:03] 2025-06-05 09:04:36,041 | INFO     | chi2: 1.8249826472701565
[2025-06-05 11:11:03] 2025-06-05 09:04:36,041 | INFO     | current chi2=1.8249826472701565 (change=0.27508942594307195 %)
[2025-06-05 11:11:03] 2025-06-05 09:04:36,042 | INFO     | right removable region: 145
[2025-06-05 11:11:03] 2025-06-05 09:04:36,042 | INFO     | sum of square deviations: 964976232.5
[2025-06-05 11:11:03] 2025-06-05 09:04:36,043 | INFO     | sum of deviations: -46042153400.00001
[2025-06-05 11:11:03] 2025-06-05 09:04:36,043 | INFO     | mean x: 1749109806.5
[2025-06-05 11:11:03] 2025-06-05 09:04:36,043 | INFO     | mean y: 2432899.4109589043
[2025-06-05 11:11:03] 2025-06-05 09:04:36,043 | INFO     | -- intersect: 83458148503.59538
[2025-06-05 11:11:03] 2025-06-05 09:04:36,043 | INFO     | intersect: 83458148503.59538
[2025-06-05 11:11:03] 2025-06-05 09:04:36,043 | INFO     | chi2: 0.2221592472450955
[2025-06-05 11:11:03] 2025-06-05 09:04:36,043 | INFO     | current chi2=0.2221592472450955 (change=87.86026206996733 %)
[2025-06-05 11:11:03] 2025-06-05 09:04:36,044 | INFO     | sum of square deviations: 869188390.0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,044 | INFO     | sum of deviations: -41614385379.00001
[2025-06-05 11:11:03] 2025-06-05 09:04:36,045 | INFO     | mean x: 1749109959.0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,045 | INFO     | mean y: 2425814.503546099
[2025-06-05 11:11:03] 2025-06-05 09:04:36,045 | INFO     | -- intersect: 83745072105.57158
[2025-06-05 11:11:03] 2025-06-05 09:04:36,045 | INFO     | intersect: 83745072105.57158
[2025-06-05 11:11:03] 2025-06-05 09:04:36,045 | INFO     | chi2: 0.2193861363839643
[2025-06-05 11:11:03] 2025-06-05 09:04:36,045 | INFO     | current chi2=0.2193861363839643 (change=1.2482536268552458 %)
[2025-06-05 11:11:03] 2025-06-05 09:04:36,045 | INFO     | left removable region: 20
[2025-06-05 11:11:03] 2025-06-05 09:04:36,045 | INFO     | sum of square deviations: 605592750.0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,046 | INFO     | sum of deviations: -28564634272.999992
[2025-06-05 11:11:03] 2025-06-05 09:04:36,046 | INFO     | mean x: 1749110081.0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,046 | INFO     | mean y: 2408598.056
[2025-06-05 11:11:03] 2025-06-05 09:04:36,046 | INFO     | -- intersect: 82504535261.5314
[2025-06-05 11:11:03] 2025-06-05 09:04:36,046 | INFO     | intersect: 82504535261.5314
[2025-06-05 11:11:03] 2025-06-05 09:04:36,047 | INFO     | chi2: 0.19482323771370713
[2025-06-05 11:11:03] 2025-06-05 09:04:36,047 | INFO     | -- intersect: 82504535261.5314
[2025-06-05 11:11:03] 2025-06-05 09:04:36,047 | INFO     | current memory leak: -47.17 B/s (using 125 data points, chi2=0.19)
[2025-06-05 11:11:03] 2025-06-05 09:04:36,047 | INFO     | ..............................
[2025-06-05 11:11:03] 2025-06-05 09:04:36,048 | INFO     | . Timing measurements:
[2025-06-05 11:11:03] 2025-06-05 09:04:36,048 | INFO     | . get job = 0 s
[2025-06-05 11:11:03] 2025-06-05 09:04:36,048 | INFO     | . initial setup = 1 s
[2025-06-05 11:11:03] 2025-06-05 09:04:36,048 | INFO     | . payload setup = 7 s
[2025-06-05 11:11:03] 2025-06-05 09:04:36,048 | INFO     | . stage-in = 0 s
[2025-06-05 11:11:03] 2025-06-05 09:04:36,048 | INFO     | . payload execution = 9188 s
[2025-06-05 11:11:03] 2025-06-05 09:04:36,048 | INFO     | . stage-out = 0 s
[2025-06-05 11:11:03] 2025-06-05 09:04:36,048 | INFO     | . log creation = 0 s
[2025-06-05 11:11:03] 2025-06-05 09:04:36,048 | INFO     | ..............................
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | 
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | job summary report
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | --------------------------------------------------
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | PanDA job id: 6677619418
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | task id: 45006595
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | errors: (none)
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | pilot state: finished 
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | transexitcode: 0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,150 | INFO     | exeerrorcode: 0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | exeerrordiag: 
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | exitcode: 0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | exitmsg: OK
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | cpuconsumptiontime: 35146 s
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | nevents: 400
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | neventsw: 0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | pid: 3076903
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | pgrp: 3076903
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | corecount: 4
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | event service: False
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | sizes: {0: 2397353, 5: 2397559, 11: 2397615, 9199: 2425708, 9200: 2434671, 9201: 2434727, 9209: 2435025}
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | --------------------------------------------------
[2025-06-05 11:11:03] 2025-06-05 09:04:36,151 | INFO     | 
[2025-06-05 11:11:03] 2025-06-05 09:04:36,152 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-06-05 11:11:03] 2025-06-05 09:04:36,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,174 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,174 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:11:03] 2025-06-05 09:04:36,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,176 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:11:03] 2025-06-05 09:04:36,176 | INFO     | job 6677619418 has completed (purged errors)
[2025-06-05 11:11:03] 2025-06-05 09:04:36,176 | INFO     | overall cleanup function is called
[2025-06-05 11:11:03] 2025-06-05 09:04:37,185 | INFO     | --- collectZombieJob: --- 10, [3076903]
[2025-06-05 11:11:03] 2025-06-05 09:04:37,185 | INFO     | zombie collector waiting for pid 3076903
[2025-06-05 11:11:03] 2025-06-05 09:04:37,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:11:03] 2025-06-05 09:04:37,185 | INFO     | collected zombie processes
[2025-06-05 11:11:03] 2025-06-05 09:04:37,185 | INFO     | will attempt to kill all subprocesses of pid=3076903
[2025-06-05 11:11:03] 2025-06-05 09:04:37,533 | INFO     | process IDs to be killed: [3076903] (in reverse order)
[2025-06-05 11:11:03] 2025-06-05 09:04:37,634 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:11:03] 2025-06-05 09:04:37,635 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:11:03] 2025-06-05 09:04:37,646 | INFO     | did not find any defunct processes belonging to 3076903
[2025-06-05 11:11:03] 2025-06-05 09:04:37,656 | INFO     | did not find any defunct processes belonging to 3076903
[2025-06-05 11:11:03] 2025-06-05 09:04:37,656 | INFO     | ready for new job
[2025-06-05 11:11:03] 2025-06-05 09:04:37,657 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:11:03] 2025-06-05 09:04:37,659 | INFO     | **************************************
[2025-06-05 11:11:03] 2025-06-05 09:04:37,659 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:11:03] 2025-06-05 09:04:37,659 | INFO     | **************************************
[2025-06-05 11:11:03] 2025-06-05 09:04:37,659 | INFO     | 
[2025-06-05 11:11:03] 2025-06-05 09:04:37,663 | INFO     | architecture information:
[2025-06-05 11:11:03] 2025-06-05 09:04:37,663 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:11:03] 2025-06-05 09:04:37,679 | INFO     | cat /etc/os-release:
[2025-06-05 11:11:03] NAME="CentOS Linux"
[2025-06-05 11:11:03] VERSION="7 (Core)"
[2025-06-05 11:11:03] ID="centos"
[2025-06-05 11:11:03] ID_LIKE="rhel fedora"
[2025-06-05 11:11:03] VERSION_ID="7"
[2025-06-05 11:11:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:11:03] ANSI_COLOR="0;31"
[2025-06-05 11:11:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:11:03] HOME_URL="https://www.centos.org/"
[2025-06-05 11:11:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:11:03] 
[2025-06-05 11:11:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:11:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:11:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:11:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:11:03] 
[2025-06-05 11:11:03] 2025-06-05 09:04:37,680 | INFO     | **************************************
[2025-06-05 11:11:03] 2025-06-05 09:04:38,183 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-06-05 11:11:03] 2025-06-05 09:04:38,200 | INFO     | sufficient remaining disk space (676177379328 B)
[2025-06-05 11:11:03] 2025-06-05 09:04:38,201 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:11:03] 2025-06-05 09:04:38,201 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:11:03] 2025-06-05 09:04:38,201 | INFO     | update_server=False
[2025-06-05 11:11:03] 2025-06-05 09:04:38,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:11:03] 2025-06-05 09:04:38,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:11:03] 2025-06-05 09:04:38,202 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 11:11:03] 2025-06-05 09:04:38,202 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:11:03] 2025-06-05 09:04:38,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:11:03] 2025-06-05 09:04:38,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:11:03] 2025-06-05 09:04:38,384 | INFO     | all job control threads have been joined
[2025-06-05 11:11:03] 2025-06-05 09:04:38,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:11:03] 2025-06-05 09:04:38,857 | INFO     | all payload control threads have been joined
[2025-06-05 11:11:03] 2025-06-05 09:04:38,904 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:11:03] 2025-06-05 09:04:38,904 | INFO     | aborting loop
[2025-06-05 11:11:03] 2025-06-05 09:04:39,150 | INFO     | all data control threads have been joined
[2025-06-05 11:11:03] 2025-06-05 09:04:39,207 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:39,316 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:39,389 | INFO     | [job] control thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:39,432 | INFO     | [job] validate thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:39,619 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:39,838 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:39,863 | INFO     | [payload] control thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:39,909 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:40,089 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:40,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:40,155 | INFO     | [data] control thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:40,208 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:40,219 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:40,244 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:41,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:11:03] 2025-06-05 09:04:42,165 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:42,828 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:11:03] 2025-06-05 09:04:44,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23454243723072)>', '<ExcThread(monitor, started 23453803464448)>']
[2025-06-05 11:11:03] 2025-06-05 09:04:45,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:11:03] 2025-06-05 09:04:45,235 | INFO     | [monitor] control thread has ended
[2025-06-05 11:11:03] 2025-06-05 09:04:49,387 | INFO     | all workflow threads have been joined
[2025-06-05 11:11:03] 2025-06-05 09:04:49,387 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:11:03] 2025-06-05 09:04:49,387 | INFO     | traces error code: 0
[2025-06-05 11:11:03] 2025-06-05 09:04:49,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:11:03] 2025-06-05 09:04:49,526 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:11:03] 2025-06-05 09:04:49,529 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:11:03] 2025-06-05 09:04:49,532 [wrapper] pilotpid: 3067675
[2025-06-05 11:11:03] 2025-06-05 09:04:49,535 [wrapper] Pilot exit status: 0
[2025-06-05 11:11:03] 2025-06-05 09:04:49,545 [wrapper] pandaids: 6677619418
[2025-06-05 11:11:03] 2025-06-05 09:04:49,612 [wrapper] cleanup supervisor_pilot 3280094 3067676
[2025-06-05 11:11:03] 2025-06-05 09:04:49,614 [wrapper] Test setup, not cleaning
[2025-06-05 11:11:03] 2025-06-05 09:04:49,617 [wrapper] apfmon messages muted
[2025-06-05 11:11:03] 2025-06-05 09:04:49,620 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:11:03] 2025-06-05 09:04:49,622 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:11:03]  *** Error codes and diagnostics ***
[2025-06-05 11:11:03]     "exeErrorCode": 0,
[2025-06-05 11:11:03]     "exeErrorDiag": "",
[2025-06-05 11:11:03]     "pilotErrorCode": 0,
[2025-06-05 11:11:03]     "pilotErrorDiag": "",
[2025-06-05 11:11:03]  *** Listing of results directory ***
[2025-06-05 11:11:03] total 392128
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc      5111 Jun  3 14:32 queuedata.json
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc    495897 Jun  3 14:33 pilot3.tar.gz
[2025-06-05 11:11:03] -rwx------ 1 boinc boinc     37140 Jun  3 14:34 runpilot2-wrapper.sh
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc       100 Jun  5 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:11:03] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 08:30 run_atlas
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc       105 Jun  5 08:30 job.xml
[2025-06-05 11:11:03] -rw-r--r-- 2 boinc boinc 216309999 Jun  5 08:30 EVNT.45006593._001313.pool.root.1
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc      6636 Jun  5 08:30 init_data.xml
[2025-06-05 11:11:03] -rw-r--r-- 2 boinc boinc     15093 Jun  5 08:30 start_atlas.sh
[2025-06-05 11:11:03] drwxrwx--x 2 boinc boinc      4096 Jun  5 08:30 shared
[2025-06-05 11:11:03] -rw-r--r-- 2 boinc boinc    508882 Jun  5 08:30 input.tar.gz
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc         0 Jun  5 08:30 boinc_lockfile
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc      2525 Jun  5 08:30 pandaJob.out
[2025-06-05 11:11:03] -rw------- 1 boinc boinc    986926 Jun  5 08:30 agis_schedconf.cvmfs.json
[2025-06-05 11:11:03] -rw------- 1 boinc boinc   1598969 Jun  5 08:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:11:03] drwx------ 4 boinc boinc      4096 Jun  5 08:30 pilot3
[2025-06-05 11:11:03] -rw------- 1 boinc boinc 179037448 Jun  5 11:03 HITS.45006595._032638.pool.root.1
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc       528 Jun  5 11:03 boinc_task_state.xml
[2025-06-05 11:11:03] -rw------- 1 boinc boinc        95 Jun  5 11:04 pilot_heartbeat.json
[2025-06-05 11:11:03] -rw------- 1 boinc boinc      1034 Jun  5 11:04 memory_monitor_summary.json
[2025-06-05 11:11:03] -rw------- 1 boinc boinc    300630 Jun  5 11:04 log.45006595._032638.job.log.tgz.1
[2025-06-05 11:11:03] -rw------- 1 boinc boinc      7727 Jun  5 11:04 heartbeat.json
[2025-06-05 11:11:03] -rw------- 1 boinc boinc      4486 Jun  5 11:04 pilotlog.txt
[2025-06-05 11:11:03] -rw------- 1 boinc boinc    875299 Jun  5 11:04 log.45006595._032638.job.log.1
[2025-06-05 11:11:03] -rw------- 1 boinc boinc       357 Jun  5 11:04 output.list
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc       620 Jun  5 11:04 runtime_log
[2025-06-05 11:11:03] -rw------- 1 boinc boinc   1198080 Jun  5 11:04 result.tar.gz
[2025-06-05 11:11:03] -rw------- 1 boinc boinc       662 Jun  5 11:04 tvIODmK1fg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmTdYKDmzxXZam.diag
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc      9025 Jun  5 11:04 runtime_log.err
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc        27 Jun  5 11:10 wrapper_checkpoint.txt
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc      8192 Jun  5 11:11 boinc_mmap_file
[2025-06-05 11:11:03] -rw-r--r-- 1 boinc boinc     20909 Jun  5 11:11 stderr.txt
[2025-06-05 11:11:03] HITS file was successfully produced:
[2025-06-05 11:11:03] -rw------- 1 boinc boinc 179037448 Jun  5 11:03 shared/HITS.pool.root.1
[2025-06-05 11:11:03]  *** Contents of shared directory: ***
[2025-06-05 11:11:03] total 387784
[2025-06-05 11:11:03] -rw-r--r-- 2 boinc boinc 216309999 Jun  5 08:30 ATLAS.root_0
[2025-06-05 11:11:03] -rw-r--r-- 2 boinc boinc     15093 Jun  5 08:30 start_atlas.sh
[2025-06-05 11:11:03] -rw-r--r-- 2 boinc boinc    508882 Jun  5 08:30 input.tar.gz
[2025-06-05 11:11:03] -rw------- 1 boinc boinc 179037448 Jun  5 11:03 HITS.pool.root.1
[2025-06-05 11:11:03] -rw------- 1 boinc boinc   1198080 Jun  5 11:04 result.tar.gz
11:11:05 (3063894): run_atlas exited; CPU time 35495.197914
11:11:05 (3063894): called boinc_finish(0)

</stderr_txt>
]]>

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