Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:04:07 (3509889): wrapper (7.7.26015): starting
15:04:07 (3509889): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 15:04:07] Arguments: --nthreads 3
[2025-06-04 15:04:07] Threads: 3
[2025-06-04 15:04:07] Checking for CVMFS
[2025-06-04 15:04:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:04:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:04:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:04:08] 2.11.5.0 3483283 114 53192 146769 2 56 24096362 31457281 0 130560 0 71695 99.976 72722 226 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-04 15:04:08] CVMFS is ok
[2025-06-04 15:04:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:04:08] Checking for apptainer binary...
[2025-06-04 15:04:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:04:08] Running /usr/bin/apptainer --version
[2025-06-04 15:04:08] apptainer version 1.3.4-1.el9
[2025-06-04 15:04:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:04:08] testio001
[2025-06-04 15:04:08] apptainer works
[2025-06-04 15:04:08] Set ATHENA_PROC_NUMBER=3
[2025-06-04 15:04:08] Set ATHENA_CORE_NUMBER=3
[2025-06-04 15:04:08] Starting ATLAS job with PandaID=6677618818
[2025-06-04 15:04:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:53:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:53:17] 2025-06-04 07:52:58,642 | INFO     | mean x: 1749020267.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,642 | INFO     | mean y: 2248818.038095238
[2025-06-04 16:53:17] 2025-06-04 07:52:58,642 | INFO     | -- intersect: -156083125406.31522
[2025-06-04 16:53:17] 2025-06-04 07:52:58,642 | INFO     | intersect: -156083125406.31522
[2025-06-04 16:53:17] 2025-06-04 07:52:58,642 | INFO     | chi2: 3.5270890382147053
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | sum of deviations: 30456317747.5
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | mean x: 1749020114.5
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | mean y: 2243901.17
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | -- intersect: -171803312964.0489
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | intersect: -171803312964.0489
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | chi2: 3.5228992767388214
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | current chi2=3.5228992767388214 (change=0.11878808361482757 %)
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | right removable region: 99
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | sum of square deviations: 310052325.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,643 | INFO     | sum of deviations: 11912723367.000002
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | mean x: 1749020419.5
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | mean y: 2311135.2
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | -- intersect: -67197947468.69145
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | intersect: -67197947468.69145
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | chi2: 1.5301059770249221
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | current chi2=1.5301059770249221 (change=56.618447664723234 %)
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | sum of deviations: -5793326465.000001
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | mean x: 1749020572.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | mean y: 2372367.863157895
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | -- intersect: 38119643759.33398
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | intersect: 38119643759.33398
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | chi2: 0.10089086265523727
[2025-06-04 16:53:17] 2025-06-04 07:52:58,644 | INFO     | current chi2=0.10089086265523727 (change=93.40628269086267 %)
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | sum of square deviations: 226022842.5
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | sum of deviations: -6916876528.5
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | mean x: 1749020724.5
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | mean y: 2376355.677777778
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | -- intersect: 53526879734.81795
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | intersect: 53526879734.81795
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | chi2: 0.03375044286913296
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | current chi2=0.03375044286913296 (change=66.54757231637075 %)
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | sum of deviations: -5580346734.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | mean x: 1749020877.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | mean y: 2370610.811764706
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | -- intersect: 51262664410.26503
[2025-06-04 16:53:17] 2025-06-04 07:52:58,645 | INFO     | intersect: 51262664410.26503
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | chi2: 0.033272159471022036
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | current chi2=0.033272159471022036 (change=1.4171173989196582 %)
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | left removable region: 40
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | sum of deviations: 176236320.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | mean x: 1749021304.0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | mean y: 2335090.186440678
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | -- intersect: -4839174936.365457
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | intersect: -4839174936.365457
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | chi2: 2.1532981419357887e-05
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | -- intersect: -4839174936.365457
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | current memory leak: 2.77 B/s (using 59 data points, chi2=0.00)
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | ..............................
[2025-06-04 16:53:17] 2025-06-04 07:52:58,646 | INFO     | . Timing measurements:
[2025-06-04 16:53:17] 2025-06-04 07:52:58,647 | INFO     | . get job = 0 s
[2025-06-04 16:53:17] 2025-06-04 07:52:58,647 | INFO     | . initial setup = 23 s
[2025-06-04 16:53:17] 2025-06-04 07:52:58,647 | INFO     | . payload setup = 3 s
[2025-06-04 16:53:17] 2025-06-04 07:52:58,647 | INFO     | . stage-in = 0 s
[2025-06-04 16:53:17] 2025-06-04 07:52:58,647 | INFO     | . payload execution = 6404 s
[2025-06-04 16:53:17] 2025-06-04 07:52:58,647 | INFO     | . stage-out = 0 s
[2025-06-04 16:53:17] 2025-06-04 07:52:58,647 | INFO     | . log creation = 0 s
[2025-06-04 16:53:17] 2025-06-04 07:52:58,647 | INFO     | ..............................
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | 
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | job summary report
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | --------------------------------------------------
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | PanDA job id: 6677618818
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | task id: 45006595
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | errors: (none)
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | pilot state: finished 
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | transexitcode: 0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,685 | INFO     | exeerrorcode: 0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | exeerrordiag: 
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | exitcode: 0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | exitmsg: OK
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | cpuconsumptiontime: 16675 s
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | nevents: 400
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | neventsw: 0
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | pid: 3519828
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | pgrp: 3519828
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | corecount: 3
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | event service: False
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 6411: 2432324, 6412: 2441265, 6414: 2441321, 6490: 2441619}
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | --------------------------------------------------
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | 
[2025-06-04 16:53:17] 2025-06-04 07:52:58,686 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-04 16:53:17] 2025-06-04 07:52:58,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | job 6677618818 has completed (purged errors)
[2025-06-04 16:53:17] 2025-06-04 07:52:58,697 | INFO     | overall cleanup function is called
[2025-06-04 16:53:17] 2025-06-04 07:52:59,703 | INFO     | --- collectZombieJob: --- 10, [3519828]
[2025-06-04 16:53:17] 2025-06-04 07:52:59,703 | INFO     | zombie collector waiting for pid 3519828
[2025-06-04 16:53:17] 2025-06-04 07:52:59,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:53:17] 2025-06-04 07:52:59,703 | INFO     | collected zombie processes
[2025-06-04 16:53:17] 2025-06-04 07:52:59,703 | INFO     | will attempt to kill all subprocesses of pid=3519828
[2025-06-04 16:53:17] 2025-06-04 07:52:59,736 | INFO     | process IDs to be killed: [3519828] (in reverse order)
[2025-06-04 16:53:17] 2025-06-04 07:52:59,755 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:53:17] 2025-06-04 07:52:59,755 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:53:17] 2025-06-04 07:52:59,756 | INFO     | did not find any defunct processes belonging to 3519828
[2025-06-04 16:53:17] 2025-06-04 07:52:59,757 | INFO     | did not find any defunct processes belonging to 3519828
[2025-06-04 16:53:17] 2025-06-04 07:52:59,757 | INFO     | ready for new job
[2025-06-04 16:53:17] 2025-06-04 07:52:59,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:53:17] 2025-06-04 07:52:59,758 | INFO     | **************************************
[2025-06-04 16:53:17] 2025-06-04 07:52:59,758 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:53:17] 2025-06-04 07:52:59,758 | INFO     | **************************************
[2025-06-04 16:53:17] 2025-06-04 07:52:59,758 | INFO     | 
[2025-06-04 16:53:17] 2025-06-04 07:52:59,770 | INFO     | architecture information:
[2025-06-04 16:53:17] 2025-06-04 07:52:59,770 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:53:17] 2025-06-04 07:52:59,778 | INFO     | cat /etc/os-release:
[2025-06-04 16:53:17] NAME="CentOS Linux"
[2025-06-04 16:53:17] VERSION="7 (Core)"
[2025-06-04 16:53:17] ID="centos"
[2025-06-04 16:53:17] ID_LIKE="rhel fedora"
[2025-06-04 16:53:17] VERSION_ID="7"
[2025-06-04 16:53:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:53:17] ANSI_COLOR="0;31"
[2025-06-04 16:53:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:53:17] HOME_URL="https://www.centos.org/"
[2025-06-04 16:53:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:53:17] 
[2025-06-04 16:53:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:53:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:53:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:53:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:53:17] 
[2025-06-04 16:53:17] 2025-06-04 07:52:59,778 | INFO     | **************************************
[2025-06-04 16:53:17] 2025-06-04 07:53:00,281 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-04 16:53:17] 2025-06-04 07:53:00,290 | INFO     | sufficient remaining disk space (127086362624 B)
[2025-06-04 16:53:17] 2025-06-04 07:53:00,290 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:53:17] 2025-06-04 07:53:00,290 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:53:17] 2025-06-04 07:53:00,290 | INFO     | update_server=False
[2025-06-04 16:53:17] 2025-06-04 07:53:00,290 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:53:17] 2025-06-04 07:53:00,290 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:53:17] 2025-06-04 07:53:00,291 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:53:17] 2025-06-04 07:53:00,291 | INFO     | aborting loop
[2025-06-04 16:53:17] 2025-06-04 07:53:00,681 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:53:17] 2025-06-04 07:53:00,800 | INFO     | all job control threads have been joined
[2025-06-04 16:53:17] 2025-06-04 07:53:00,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:53:17] 2025-06-04 07:53:01,143 | INFO     | all data control threads have been joined
[2025-06-04 16:53:17] 2025-06-04 07:53:01,238 | INFO     | all payload control threads have been joined
[2025-06-04 16:53:17] 2025-06-04 07:53:01,292 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:01,295 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:01,295 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:01,319 | INFO     | PID=3513476 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 16:53:17] 2025-06-04 07:53:01,319 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:53:17] 2025-06-04 07:53:01,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:53:17] 2025-06-04 07:53:01,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:53:17] 2025-06-04 07:53:01,652 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:01,805 | INFO     | [job] control thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:01,820 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:02,148 | INFO     | [data] control thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:02,162 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:02,243 | INFO     | [payload] control thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:02,322 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:02,649 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:02,748 | INFO     | [job] validate thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:02,787 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:02,817 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:04,686 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:11,270 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:53:17] 2025-06-04 07:53:12,275 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:53:17] 2025-06-04 07:53:12,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140249778423616)>', '<ExcThread(monitor, started 140249422337792)>']
[2025-06-04 16:53:17] 2025-06-04 07:53:13,379 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:53:17] 2025-06-04 07:53:13,379 | INFO     | [monitor] control thread has ended
[2025-06-04 16:53:17] 2025-06-04 07:53:17,868 | INFO     | all workflow threads have been joined
[2025-06-04 16:53:17] 2025-06-04 07:53:17,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:53:17] 2025-06-04 07:53:17,868 | INFO     | traces error code: 0
[2025-06-04 16:53:17] 2025-06-04 07:53:17,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:53:17] 2025-06-04 07:53:17,931 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:53:17] 2025-06-04 07:53:17,933 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:53:17] 2025-06-04 07:53:17,934 [wrapper] pilotpid: 3513476
[2025-06-04 16:53:17] 2025-06-04 07:53:17,936 [wrapper] Pilot exit status: 0
[2025-06-04 16:53:17] 2025-06-04 07:53:17,942 [wrapper] pandaids: 6677618818
[2025-06-04 16:53:17] 2025-06-04 07:53:17,954 [wrapper] cleanup supervisor_pilot 3533687 3513477
[2025-06-04 16:53:17] 2025-06-04 07:53:17,956 [wrapper] Test setup, not cleaning
[2025-06-04 16:53:17] 2025-06-04 07:53:17,957 [wrapper] apfmon messages muted
[2025-06-04 16:53:17] 2025-06-04 07:53:17,959 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:53:17] 2025-06-04 07:53:17,961 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:53:17]  *** Error codes and diagnostics ***
[2025-06-04 16:53:17]     "exeErrorCode": 0,
[2025-06-04 16:53:17]     "exeErrorDiag": "",
[2025-06-04 16:53:17]     "pilotErrorCode": 0,
[2025-06-04 16:53:17]     "pilotErrorDiag": "",
[2025-06-04 16:53:17]  *** Listing of results directory ***
[2025-06-04 16:53:17] total 388292
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc      5111 Jun  3 21:32 queuedata.json
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc    495897 Jun  3 21:33 pilot3.tar.gz
[2025-06-04 16:53:17] -rwx------. 1 boinc boinc     37140 Jun  3 21:33 runpilot2-wrapper.sh
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:53:17] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:04 run_atlas
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:04 job.xml
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc      9292 Jun  4 15:04 init_data.xml
[2025-06-04 16:53:17] -rw-r--r--. 2 boinc boinc 216972464 Jun  4 15:04 EVNT.45006593._001309.pool.root.1
[2025-06-04 16:53:17] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:04 start_atlas.sh
[2025-06-04 16:53:17] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:04 shared
[2025-06-04 16:53:17] -rw-r--r--. 2 boinc boinc    508878 Jun  4 15:04 input.tar.gz
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:04 boinc_lockfile
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc      2525 Jun  4 15:04 pandaJob.out
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc    986745 Jun  4 15:04 agis_schedconf.cvmfs.json
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc   1603667 Jun  4 15:04 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:53:17] drwx------. 4 boinc boinc      4096 Jun  4 15:04 pilot3
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc 175109581 Jun  4 16:51 HITS.45006595._032533.pool.root.1
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc       529 Jun  4 16:51 boinc_task_state.xml
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc      1016 Jun  4 16:51 memory_monitor_summary.json
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc    246831 Jun  4 16:51 log.45006595._032533.job.log.tgz.1
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc        95 Jun  4 16:52 pilot_heartbeat.json
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc        27 Jun  4 16:52 wrapper_checkpoint.txt
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc      8192 Jun  4 16:52 boinc_mmap_file
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc      7665 Jun  4 16:52 heartbeat.json
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc      4745 Jun  4 16:53 pilotlog.txt
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc    604970 Jun  4 16:53 log.45006595._032533.job.log.1
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc       357 Jun  4 16:53 output.list
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:53 runtime_log
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc    870400 Jun  4 16:53 result.tar.gz
[2025-06-04 16:53:17] -rw-------. 1 boinc boinc       643 Jun  4 16:53 rzZKDmV0fg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmK6jKDmsQ4p1n.diag
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc      8617 Jun  4 16:53 runtime_log.err
[2025-06-04 16:53:17] -rw-r--r--. 1 boinc boinc     20473 Jun  4 16:53 stderr.txt
[2025-06-04 16:53:18] HITS file was successfully produced:
[2025-06-04 16:53:18] -rw-------. 1 boinc boinc 175109581 Jun  4 16:51 shared/HITS.pool.root.1
[2025-06-04 16:53:18]  *** Contents of shared directory: ***
[2025-06-04 16:53:18] total 384264
[2025-06-04 16:53:18] -rw-r--r--. 2 boinc boinc 216972464 Jun  4 15:04 ATLAS.root_0
[2025-06-04 16:53:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:04 start_atlas.sh
[2025-06-04 16:53:18] -rw-r--r--. 2 boinc boinc    508878 Jun  4 15:04 input.tar.gz
[2025-06-04 16:53:18] -rw-------. 1 boinc boinc 175109581 Jun  4 16:51 HITS.pool.root.1
[2025-06-04 16:53:18] -rw-------. 1 boinc boinc    870400 Jun  4 16:53 result.tar.gz
16:53:19 (3509889): run_atlas exited; CPU time 16678.733208
16:53:19 (3509889): called boinc_finish(0)

</stderr_txt>
]]>

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