Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:50:40 (19365): wrapper (7.7.26015): starting
00:50:40 (19365): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:50:40] Arguments: --nthreads 8
[2025-06-04 00:50:40] Threads: 8
[2025-06-04 00:50:40] Checking for CVMFS
[2025-06-04 00:50:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:50:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:50:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:50:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:50:42] 2.11.2.0 13959 32572 88296 146760 2 93 20990642 25165824 4517 130560 0 17411705 99.757 18911894 3439 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 00:50:42] CVMFS is ok
[2025-06-04 00:50:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:50:42] Checking for apptainer binary...
[2025-06-04 00:50:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:50:42] Running /usr/bin/apptainer --version
[2025-06-04 00:50:43] apptainer version 1.3.2-1.el7
[2025-06-04 00:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:52:46] cg-vwn499.simple-grid.lan
[2025-06-04 00:52:46] apptainer works
[2025-06-04 00:52:46] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:52:46] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:52:46] Starting ATLAS job with PandaID=6677619343
[2025-06-04 00:52:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 06:12:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 06:12:41] 2025-06-04 02:20:41,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 06:12:41] 2025-06-04 02:20:41,057 | INFO     | fitting pss+swap vs Time
[2025-06-04 06:12:41] 2025-06-04 02:20:41,058 | INFO     | sum of square deviations: 2194675568.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,059 | INFO     | sum of deviations: 24055051648.999992
[2025-06-04 06:12:41] 2025-06-04 02:20:41,059 | INFO     | mean x: 1748997657.5
[2025-06-04 06:12:41] 2025-06-04 02:20:41,060 | INFO     | mean y: 2446174.2604166665
[2025-06-04 06:12:41] 2025-06-04 02:20:41,060 | INFO     | -- intersect: -19167689766.826664
[2025-06-04 06:12:41] 2025-06-04 02:20:41,060 | INFO     | intersect: -19167689766.826664
[2025-06-04 06:12:41] 2025-06-04 02:20:41,060 | INFO     | chi2: 2.857970150697069
[2025-06-04 06:12:41] 2025-06-04 02:20:41,060 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,062 | INFO     | sum of deviations: 35820033382.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,062 | INFO     | mean x: 1748997505.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,062 | INFO     | mean y: 2456671.2352941176
[2025-06-04 06:12:41] 2025-06-04 02:20:41,062 | INFO     | -- intersect: -30895115276.269436
[2025-06-04 06:12:41] 2025-06-04 02:20:41,062 | INFO     | intersect: -30895115276.269436
[2025-06-04 06:12:41] 2025-06-04 02:20:41,062 | INFO     | chi2: 2.0912049545280453
[2025-06-04 06:12:41] 2025-06-04 02:20:41,062 | INFO     | current chi2=2.0912049545280453 (change=26.829013451452838 %)
[2025-06-04 06:12:41] 2025-06-04 02:20:41,063 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 06:12:41] 2025-06-04 02:20:41,064 | INFO     | sum of deviations: 34695745035.49999
[2025-06-04 06:12:41] 2025-06-04 02:20:41,064 | INFO     | mean x: 1748997352.5
[2025-06-04 06:12:41] 2025-06-04 02:20:41,064 | INFO     | mean y: 2455588.2032967033
[2025-06-04 06:12:41] 2025-06-04 02:20:41,064 | INFO     | -- intersect: -32460338215.20742
[2025-06-04 06:12:41] 2025-06-04 02:20:41,064 | INFO     | intersect: -32460338215.20742
[2025-06-04 06:12:41] 2025-06-04 02:20:41,065 | INFO     | chi2: 2.093336491264583
[2025-06-04 06:12:41] 2025-06-04 02:20:41,065 | INFO     | current chi2=2.093336491264583 (change=-0.1019286384111892 %)
[2025-06-04 06:12:41] 2025-06-04 02:20:41,065 | INFO     | right removable region: 181
[2025-06-04 06:12:41] 2025-06-04 02:20:41,065 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,066 | INFO     | sum of deviations: -13502138513.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,067 | INFO     | mean x: 1748997810.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,067 | INFO     | mean y: 2480144.7112299465
[2025-06-04 06:12:41] 2025-06-04 02:20:41,067 | INFO     | -- intersect: 11649129505.76392
[2025-06-04 06:12:41] 2025-06-04 02:20:41,067 | INFO     | intersect: 11649129505.76392
[2025-06-04 06:12:41] 2025-06-04 02:20:41,067 | INFO     | chi2: 0.8524311718665745
[2025-06-04 06:12:41] 2025-06-04 02:20:41,067 | INFO     | current chi2=0.8524311718665745 (change=70.17354531646653 %)
[2025-06-04 06:12:41] 2025-06-04 02:20:41,068 | INFO     | sum of square deviations: 1869302025.5
[2025-06-04 06:12:41] 2025-06-04 02:20:41,069 | INFO     | sum of deviations: -10552542500.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,069 | INFO     | mean x: 1748997962.5
[2025-06-04 06:12:41] 2025-06-04 02:20:41,069 | INFO     | mean y: 2477252.10989011
[2025-06-04 06:12:41] 2025-06-04 02:20:41,069 | INFO     | -- intersect: 9875881913.273703
[2025-06-04 06:12:41] 2025-06-04 02:20:41,069 | INFO     | intersect: 9875881913.273703
[2025-06-04 06:12:41] 2025-06-04 02:20:41,069 | INFO     | chi2: 0.8310622016115229
[2025-06-04 06:12:41] 2025-06-04 02:20:41,070 | INFO     | current chi2=0.8310622016115229 (change=2.5068264700198366 %)
[2025-06-04 06:12:41] 2025-06-04 02:20:41,070 | INFO     | left removable region: 20
[2025-06-04 06:12:41] 2025-06-04 02:20:41,070 | INFO     | sum of square deviations: 1294014960.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,071 | INFO     | sum of deviations: 3513833813.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,071 | INFO     | mean x: 1748997932.0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,071 | INFO     | mean y: 2486490.8757763975
[2025-06-04 06:12:41] 2025-06-04 02:20:41,071 | INFO     | -- intersect: -4746831146.324241
[2025-06-04 06:12:41] 2025-06-04 02:20:41,071 | INFO     | intersect: -4746831146.324241
[2025-06-04 06:12:41] 2025-06-04 02:20:41,072 | INFO     | chi2: 0.0008290815024169805
[2025-06-04 06:12:41] 2025-06-04 02:20:41,072 | INFO     | -- intersect: -4746831146.324241
[2025-06-04 06:12:41] 2025-06-04 02:20:41,072 | INFO     | current memory leak: 2.72 B/s (using 161 data points, chi2=0.00)
[2025-06-04 06:12:41] 2025-06-04 02:20:41,073 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2025-06-04 06:12:41] 2025-06-04 02:20:41,073 | INFO     | ..............................
[2025-06-04 06:12:41] 2025-06-04 02:20:41,073 | INFO     | . Timing measurements:
[2025-06-04 06:12:41] 2025-06-04 02:20:41,073 | INFO     | . get job = 0 s
[2025-06-04 06:12:41] 2025-06-04 02:20:41,073 | INFO     | . initial setup = 9 s
[2025-06-04 06:12:41] 2025-06-04 02:20:41,073 | INFO     | . payload setup = 173 s
[2025-06-04 06:12:41] 2025-06-04 02:20:41,073 | INFO     | . stage-in = 0 s
[2025-06-04 06:12:41] 2025-06-04 02:20:41,073 | INFO     | . payload execution = 11832 s
[2025-06-04 06:12:41] 2025-06-04 02:20:41,073 | INFO     | . stage-out = 2 s
[2025-06-04 06:12:41] 2025-06-04 02:20:41,074 | INFO     | . log creation = 0 s
[2025-06-04 06:12:41] 2025-06-04 02:20:41,074 | INFO     | ..............................
[2025-06-04 06:12:41] 2025-06-04 02:20:41,531 | INFO     | 
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | job summary report
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | --------------------------------------------------
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | PanDA job id: 6677619343
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | task id: 45006595
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | errors: (none)
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | pilot state: finished 
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | transexitcode: 0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | exeerrorcode: 0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | exeerrordiag: 
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | exitcode: 0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,532 | INFO     | exitmsg: OK
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | cpuconsumptiontime: 43158 s
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | nevents: 400
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | neventsw: 0
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | pid: 5522
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | pgrp: 5522
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | corecount: 8
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | event service: False
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | sizes: {0: 2405298, 1: 2405553, 12: 2405553, 23: 2405581, 34: 2405609, 44: 2405637, 55: 2405793, 66: 2405821, 76: 2405849, 87: 2405905, 89: 2406195, 98: 2406503, 1
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | --------------------------------------------------
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | 
[2025-06-04 06:12:41] 2025-06-04 02:20:41,533 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 06:12:41] 2025-06-04 02:20:41,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,875 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,875 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,876 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,876 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,877 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,877 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 06:12:41] 2025-06-04 02:20:41,877 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,877 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 06:12:41] 2025-06-04 02:20:41,878 | INFO     | job 6677619343 has completed (purged errors)
[2025-06-04 06:12:41] 2025-06-04 02:20:41,878 | INFO     | overall cleanup function is called
[2025-06-04 06:12:41] 2025-06-04 02:20:42,887 | INFO     | --- collectZombieJob: --- 10, [5522]
[2025-06-04 06:12:41] 2025-06-04 02:20:42,887 | INFO     | zombie collector waiting for pid 5522
[2025-06-04 06:12:41] 2025-06-04 02:20:42,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 06:12:41] 2025-06-04 02:20:42,888 | INFO     | collected zombie processes
[2025-06-04 06:12:41] 2025-06-04 02:20:42,888 | INFO     | will attempt to kill all subprocesses of pid=5522
[2025-06-04 06:12:41] 2025-06-04 02:20:43,016 | INFO     | process IDs to be killed: [5522] (in reverse order)
[2025-06-04 06:12:41] 2025-06-04 02:20:43,955 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 06:12:41] 2025-06-04 02:20:43,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 06:12:41] 2025-06-04 02:20:43,959 | INFO     | did not find any defunct processes belonging to 5522
[2025-06-04 06:12:41] 2025-06-04 02:20:43,962 | INFO     | did not find any defunct processes belonging to 5522
[2025-06-04 06:12:41] 2025-06-04 02:20:43,963 | INFO     | ready for new job
[2025-06-04 06:12:41] 2025-06-04 02:20:43,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 06:12:41] 2025-06-04 02:20:43,973 | INFO     | ***************************************
[2025-06-04 06:12:41] 2025-06-04 02:20:43,974 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-04 06:12:41] 2025-06-04 02:20:43,974 | INFO     | ***************************************
[2025-06-04 06:12:41] 2025-06-04 02:20:43,974 | INFO     | 
[2025-06-04 06:12:41] 2025-06-04 02:20:43,974 | INFO     | pilot is running in a VM
[2025-06-04 06:12:41] 2025-06-04 02:20:43,975 | INFO     | architecture information:
[2025-06-04 06:12:41] 2025-06-04 02:20:43,994 | INFO     | executing command: cat /etc/os-release
[2025-06-04 06:12:41] 2025-06-04 02:20:44,227 | INFO     | cat /etc/os-release:
[2025-06-04 06:12:41] NAME="CentOS Linux"
[2025-06-04 06:12:41] VERSION="7 (Core)"
[2025-06-04 06:12:41] ID="centos"
[2025-06-04 06:12:41] ID_LIKE="rhel fedora"
[2025-06-04 06:12:41] VERSION_ID="7"
[2025-06-04 06:12:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 06:12:41] ANSI_COLOR="0;31"
[2025-06-04 06:12:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 06:12:41] HOME_URL="https://www.centos.org/"
[2025-06-04 06:12:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 06:12:41] 
[2025-06-04 06:12:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 06:12:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 06:12:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 06:12:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 06:12:41] 
[2025-06-04 06:12:41] 2025-06-04 02:20:44,227 | INFO     | ***************************************
[2025-06-04 06:12:41] 2025-06-04 02:20:44,730 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 06:12:41] 2025-06-04 02:20:44,993 | INFO     | sufficient remaining disk space (496578330624 B)
[2025-06-04 06:12:41] 2025-06-04 02:20:44,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 06:12:41] 2025-06-04 02:20:44,993 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 06:12:41] 2025-06-04 02:20:44,994 | INFO     | update_server=False
[2025-06-04 06:12:41] 2025-06-04 02:20:44,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 06:12:41] 2025-06-04 02:20:45,325 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 06:12:41] 2025-06-04 02:20:45,325 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 06:12:41] 2025-06-04 02:20:45,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:12:41] 2025-06-04 02:20:45,326 | INFO     | will abort loop
[2025-06-04 06:12:41] 2025-06-04 02:20:45,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 06:12:41] 2025-06-04 02:20:45,631 | INFO     | all payload control threads have been joined
[2025-06-04 06:12:41] 2025-06-04 02:20:45,752 | INFO     | all data control threads have been joined
[2025-06-04 06:12:41] 2025-06-04 02:20:45,999 | INFO     | [job] retrieve thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:46,090 | INFO     | [job] validate thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:46,103 | INFO     | all job control threads have been joined
[2025-06-04 06:12:41] 2025-06-04 02:20:46,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 06:12:41] 2025-06-04 02:20:46,331 | INFO     | [job] job monitor thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:46,414 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:46,637 | INFO     | [payload] control thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:46,734 | INFO     | [payload] failed_post thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:46,758 | INFO     | [data] control thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:46,786 | INFO     | [data] copytool_in thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:47,006 | INFO     | [payload] validate_post thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:47,109 | INFO     | [job] control thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:47,242 | INFO     | [job] queue monitor thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:47,437 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:47,452 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:47,493 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:47,612 | INFO     | [data] copytool_out thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:47,638 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 06:12:41] 2025-06-04 02:20:51,647 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 06:12:41] 2025-06-04 02:20:53,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140406648137536)>', '<ExcThread(monitor, started 140405685344000)>']
[2025-06-04 06:12:41] 2025-06-04 02:20:58,564 | INFO     | all workflow threads have been joined
[2025-06-04 06:12:41] 2025-06-04 02:20:58,564 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 06:12:41] 2025-06-04 02:20:58,565 | INFO     | traces error code: 0
[2025-06-04 06:12:41] 2025-06-04 02:20:58,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 06:12:41] 2025-06-04 02:21:14,121 | INFO     | PID=27313 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 06:12:41] 2025-06-04 02:21:14,121 | INFO     | .. there are 9 such processes running
[2025-06-04 06:12:41] 2025-06-04 02:21:14,121 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 06:12:41] 2025-06-04 02:21:14,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 06:12:41] 2025-06-04 02:21:14,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 06:12:41] 2025-06-04 02:21:14,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 06:12:41] 2025-06-04 02:21:14,122 | INFO     | [monitor] control thread has ended
[2025-06-04 06:12:41] 2025-06-04 02:21:14,541 [wrapper] ==== pilot stdout END ====
[2025-06-04 06:12:41] 2025-06-04 02:21:14,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 06:12:41] 2025-06-04 02:21:14,679 [wrapper] pilotpid: 27313
[2025-06-04 06:12:41] 2025-06-04 02:21:14,749 [wrapper] Pilot exit status: 0
[2025-06-04 06:12:41] 2025-06-04 02:21:15,116 [wrapper] pandaids: 6677619343
[2025-06-04 06:12:41] 2025-06-04 02:21:15,581 [wrapper] cleanup supervisor_pilot 15689 27314
[2025-06-04 06:12:41] 2025-06-04 02:21:15,631 [wrapper] Test setup, not cleaning
[2025-06-04 06:12:41] 2025-06-04 02:21:15,680 [wrapper] apfmon messages muted
[2025-06-04 06:12:41] 2025-06-04 02:21:15,734 [wrapper] ==== wrapper stdout END ====
[2025-06-04 06:12:41] 2025-06-04 02:21:15,805 [wrapper] ==== wrapper stderr END ====
[2025-06-04 06:12:41]  *** Error codes and diagnostics ***
[2025-06-04 06:12:41]     "exeErrorCode": 0,
[2025-06-04 06:12:41]     "exeErrorDiag": "",
[2025-06-04 06:12:41]     "pilotErrorCode": 0,
[2025-06-04 06:12:41]     "pilotErrorDiag": "",
[2025-06-04 06:12:41]  *** Listing of results directory ***
[2025-06-04 06:12:41] total 385644
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc    549845 Jun  2 11:40 pilot3.tar.gz
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc      5111 Jun  3 14:32 queuedata.json
[2025-06-04 06:12:41] -rwx------. 1 boinc boinc     37140 Jun  3 14:33 runpilot2-wrapper.sh
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc       100 Jun  4 00:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 06:12:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 00:50 run_atlas
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc       105 Jun  4 00:50 job.xml
[2025-06-04 06:12:41] -rw-r--r--. 2 boinc boinc 216806216 Jun  4 00:50 EVNT.45006593._001310.pool.root.1
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc      6392 Jun  4 00:50 init_data.xml
[2025-06-04 06:12:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:50 start_atlas.sh
[2025-06-04 06:12:41] drwxrwx--x. 2 boinc boinc        68 Jun  4 00:50 shared
[2025-06-04 06:12:41] -rw-r--r--. 2 boinc boinc    564114 Jun  4 00:50 input.tar.gz
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc         0 Jun  4 00:50 boinc_lockfile
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc      2525 Jun  4 00:52 pandaJob.out
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc    986861 Jun  4 00:55 agis_schedconf.cvmfs.json
[2025-06-04 06:12:41] drwx------. 6 boinc boinc      4096 Jun  4 00:55 pilot3
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc 171274836 Jun  4 04:17 HITS.45006595._032563.pool.root.1
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc       531 Jun  4 04:18 boinc_task_state.xml
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc      1016 Jun  4 04:18 memory_monitor_summary.json
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc   1603667 Jun  4 04:18 agis_ddmendpoints.agis.ALL.json
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc    380735 Jun  4 04:18 log.45006595._032563.job.log.tgz.1
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc        95 Jun  4 04:20 pilot_heartbeat.json
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc      7706 Jun  4 04:20 heartbeat.json
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc       820 Jun  4 04:21 pilotlog.txt
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc   1067629 Jun  4 04:21 log.45006595._032563.job.log.1
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc       357 Jun  4 04:21 output.list
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:21 runtime_log
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc   1464320 Jun  4 04:21 result.tar.gz
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc      8659 Jun  4 04:21 runtime_log.err
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc       656 Jun  4 04:21 l77KDmV0fg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm6jKDm8sY8Hm.diag
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc      8192 Jun  4 06:12 boinc_mmap_file
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc        28 Jun  4 06:12 wrapper_checkpoint.txt
[2025-06-04 06:12:41] -rw-r--r--. 1 boinc boinc     20632 Jun  4 06:12 stderr.txt
[2025-06-04 06:12:41] HITS file was successfully produced:
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc 171274836 Jun  4 04:17 shared/HITS.pool.root.1
[2025-06-04 06:12:41]  *** Contents of shared directory: ***
[2025-06-04 06:12:41] total 380992
[2025-06-04 06:12:41] -rw-r--r--. 2 boinc boinc 216806216 Jun  4 00:50 ATLAS.root_0
[2025-06-04 06:12:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:50 start_atlas.sh
[2025-06-04 06:12:41] -rw-r--r--. 2 boinc boinc    564114 Jun  4 00:50 input.tar.gz
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc 171274836 Jun  4 04:17 HITS.pool.root.1
[2025-06-04 06:12:41] -rw-------. 1 boinc boinc   1464320 Jun  4 04:21 result.tar.gz
06:12:43 (19365): run_atlas exited; CPU time 43314.053770
06:12:43 (19365): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN