Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
05:13:56 (1188423): wrapper (7.7.26015): starting
05:13:56 (1188423): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 05:13:56] Arguments: --nthreads 12
[2025-06-05 05:13:56] Threads: 12
[2025-06-05 05:13:56] Checking for CVMFS
[2025-06-05 05:13:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 05:13:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 05:13:56] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 05:13:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 05:13:56] 2.12.7.0 359462 2625 61024 146806 1 60 3990366 4096001 138 130560 0 2212666 99.991 632861 133 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 05:13:56] CVMFS is ok
[2025-06-05 05:13:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 05:13:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 05:13:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 05:13:56] Further information can be found at the LHC@home message board.
[2025-06-05 05:13:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 05:13:56] Checking for apptainer binary...
[2025-06-05 05:13:56] apptainer is not installed, using version from CVMFS
[2025-06-05 05:13:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 05:13:56] ggg3250
[2025-06-05 05:13:56] apptainer works
[2025-06-05 05:13:56] Set ATHENA_PROC_NUMBER=12
[2025-06-05 05:13:56] Set ATHENA_CORE_NUMBER=12
[2025-06-05 05:13:56] Starting ATLAS job with PandaID=6677580191
[2025-06-05 05:13:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 08:17:42]  *** The last 200 lines of the pilot log: ***
[2025-06-05 08:17:42] 2025-06-05 08:17:22,472 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 08:17:42] 2025-06-05 08:17:22,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 08:17:42] 2025-06-05 08:17:22,473 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 08:17:42] 2025-06-05 08:17:22,474 | INFO     | fitting pss+swap vs Time
[2025-06-05 08:17:42] 2025-06-05 08:17:22,474 | INFO     | sum of square deviations: 1808350185.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,475 | INFO     | sum of deviations: 14270475847.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,475 | INFO     | mean x: 1749105921.5
[2025-06-05 08:17:42] 2025-06-05 08:17:22,475 | INFO     | mean y: 2634209.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,475 | INFO     | -- intersect: -13800319452.10764
[2025-06-05 08:17:42] 2025-06-05 08:17:22,475 | INFO     | intersect: -13800319452.10764
[2025-06-05 08:17:42] 2025-06-05 08:17:22,475 | INFO     | chi2: 1.8407601864568215
[2025-06-05 08:17:42] 2025-06-05 08:17:22,475 | INFO     | sum of square deviations: 1661798600.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,476 | INFO     | sum of deviations: 25795024799.000004
[2025-06-05 08:17:42] 2025-06-05 08:17:22,476 | INFO     | mean x: 1749105769.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,476 | INFO     | mean y: 2645918.1428571427
[2025-06-05 08:17:42] 2025-06-05 08:17:22,476 | INFO     | -- intersect: -27147591594.04964
[2025-06-05 08:17:42] 2025-06-05 08:17:22,476 | INFO     | intersect: -27147591594.04964
[2025-06-05 08:17:42] 2025-06-05 08:17:22,476 | INFO     | chi2: 1.1350838065494684
[2025-06-05 08:17:42] 2025-06-05 08:17:22,476 | INFO     | current chi2=1.1350838065494684 (change=38.336138791966754 %)
[2025-06-05 08:17:42] 2025-06-05 08:17:22,476 | INFO     | sum of square deviations: 1523386702.5
[2025-06-05 08:17:42] 2025-06-05 08:17:22,477 | INFO     | sum of deviations: 24987597872.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,477 | INFO     | mean x: 1749105616.5
[2025-06-05 08:17:42] 2025-06-05 08:17:22,477 | INFO     | mean y: 2645027.7647058824
[2025-06-05 08:17:42] 2025-06-05 08:17:22,477 | INFO     | -- intersect: -28687344000.65052
[2025-06-05 08:17:42] 2025-06-05 08:17:22,477 | INFO     | intersect: -28687344000.65052
[2025-06-05 08:17:42] 2025-06-05 08:17:22,477 | INFO     | chi2: 1.1355735089257866
[2025-06-05 08:17:42] 2025-06-05 08:17:22,477 | INFO     | current chi2=1.1355735089257866 (change=-0.04314239825223317 %)
[2025-06-05 08:17:42] 2025-06-05 08:17:22,477 | INFO     | right removable region: 169
[2025-06-05 08:17:42] 2025-06-05 08:17:22,477 | INFO     | sum of square deviations: 1661798600.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,478 | INFO     | sum of deviations: -5281807427.000002
[2025-06-05 08:17:42] 2025-06-05 08:17:22,478 | INFO     | mean x: 1749106074.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,478 | INFO     | mean y: 2654152.76
[2025-06-05 08:17:42] 2025-06-05 08:17:22,478 | INFO     | -- intersect: 5561956857.8314905
[2025-06-05 08:17:42] 2025-06-05 08:17:22,478 | INFO     | intersect: 5561956857.8314905
[2025-06-05 08:17:42] 2025-06-05 08:17:22,478 | INFO     | chi2: 0.7251695055352877
[2025-06-05 08:17:42] 2025-06-05 08:17:22,478 | INFO     | current chi2=0.7251695055352877 (change=60.60488971509501 %)
[2025-06-05 08:17:42] 2025-06-05 08:17:22,478 | INFO     | sum of square deviations: 1523386702.5
[2025-06-05 08:17:42] 2025-06-05 08:17:22,479 | INFO     | sum of deviations: -6764405930.500001
[2025-06-05 08:17:42] 2025-06-05 08:17:22,479 | INFO     | mean x: 1749106226.5
[2025-06-05 08:17:42] 2025-06-05 08:17:22,479 | INFO     | mean y: 2655776.7
[2025-06-05 08:17:42] 2025-06-05 08:17:22,479 | INFO     | -- intersect: 7769340697.99698
[2025-06-05 08:17:42] 2025-06-05 08:17:22,479 | INFO     | intersect: 7769340697.99698
[2025-06-05 08:17:42] 2025-06-05 08:17:22,479 | INFO     | chi2: 0.723063969127982
[2025-06-05 08:17:42] 2025-06-05 08:17:22,479 | INFO     | current chi2=0.723063969127982 (change=0.29035093053885314 %)
[2025-06-05 08:17:42] 2025-06-05 08:17:22,479 | INFO     | left removable region: 20
[2025-06-05 08:17:42] 2025-06-05 08:17:22,479 | INFO     | sum of square deviations: 1025693650.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | sum of deviations: 3065900565.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | mean x: 1749106196.0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | mean y: 2670463.402684564
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | -- intersect: -5225582314.17998
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | intersect: -5225582314.17998
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | chi2: 0.0004197824065602686
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | -- intersect: -5225582314.17998
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | current memory leak: 2.99 B/s (using 149 data points, chi2=0.00)
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | ..............................
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | . Timing measurements:
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | . get job = 0 s
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | . initial setup = 1 s
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | . payload setup = 2 s
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | . stage-in = 0 s
[2025-06-05 08:17:42] 2025-06-05 08:17:22,480 | INFO     | . payload execution = 10927 s
[2025-06-05 08:17:42] 2025-06-05 08:17:22,481 | INFO     | . stage-out = 0 s
[2025-06-05 08:17:42] 2025-06-05 08:17:22,481 | INFO     | . log creation = 0 s
[2025-06-05 08:17:42] 2025-06-05 08:17:22,481 | INFO     | ..............................
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | 
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | job summary report
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | --------------------------------------------------
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | PanDA job id: 6677580191
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | task id: 45006595
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | errors: (none)
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | pilot state: finished 
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | transexitcode: 0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | exeerrorcode: 0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | exeerrordiag: 
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | exitcode: 0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | exitmsg: OK
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | cpuconsumptiontime: 21564 s
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | nevents: 400
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | neventsw: 0
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | pid: 1205675
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | pgrp: 1205675
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | corecount: 12
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | event service: False
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | sizes: {0: 2397365, 3: 2397571, 11: 2397599, 10934: 2435551, 10937: 2435551, 10987: 2435721}
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | --------------------------------------------------
[2025-06-05 08:17:42] 2025-06-05 08:17:22,522 | INFO     | 
[2025-06-05 08:17:42] 2025-06-05 08:17:22,523 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 08:17:42] 2025-06-05 08:17:22,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 08:17:42] 2025-06-05 08:17:22,532 | INFO     | job 6677580191 has completed (purged errors)
[2025-06-05 08:17:42] 2025-06-05 08:17:22,532 | INFO     | overall cleanup function is called
[2025-06-05 08:17:42] 2025-06-05 08:17:23,538 | INFO     | --- collectZombieJob: --- 10, [1205675]
[2025-06-05 08:17:42] 2025-06-05 08:17:23,539 | INFO     | zombie collector waiting for pid 1205675
[2025-06-05 08:17:42] 2025-06-05 08:17:23,539 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 08:17:42] 2025-06-05 08:17:23,539 | INFO     | collected zombie processes
[2025-06-05 08:17:42] 2025-06-05 08:17:23,540 | INFO     | will attempt to kill all subprocesses of pid=1205675
[2025-06-05 08:17:42] 2025-06-05 08:17:23,633 | INFO     | process IDs to be killed: [1205675] (in reverse order)
[2025-06-05 08:17:42] 2025-06-05 08:17:23,651 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 08:17:42] 2025-06-05 08:17:23,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 08:17:42] 2025-06-05 08:17:23,652 | INFO     | did not find any defunct processes belonging to 1205675
[2025-06-05 08:17:42] 2025-06-05 08:17:23,653 | INFO     | did not find any defunct processes belonging to 1205675
[2025-06-05 08:17:42] 2025-06-05 08:17:23,653 | INFO     | ready for new job
[2025-06-05 08:17:42] 2025-06-05 08:17:23,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 08:17:42] 2025-06-05 08:17:23,654 | INFO     | **************************************
[2025-06-05 08:17:42] 2025-06-05 08:17:23,654 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 08:17:42] 2025-06-05 08:17:23,654 | INFO     | **************************************
[2025-06-05 08:17:42] 2025-06-05 08:17:23,654 | INFO     | 
[2025-06-05 08:17:42] 2025-06-05 08:17:23,675 | INFO     | architecture information:
[2025-06-05 08:17:42] 2025-06-05 08:17:23,675 | INFO     | executing command: cat /etc/os-release
[2025-06-05 08:17:42] 2025-06-05 08:17:23,681 | INFO     | cat /etc/os-release:
[2025-06-05 08:17:42] NAME="CentOS Linux"
[2025-06-05 08:17:42] VERSION="7 (Core)"
[2025-06-05 08:17:42] ID="centos"
[2025-06-05 08:17:42] ID_LIKE="rhel fedora"
[2025-06-05 08:17:42] VERSION_ID="7"
[2025-06-05 08:17:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 08:17:42] ANSI_COLOR="0;31"
[2025-06-05 08:17:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 08:17:42] HOME_URL="https://www.centos.org/"
[2025-06-05 08:17:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 08:17:42] 
[2025-06-05 08:17:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 08:17:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 08:17:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 08:17:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 08:17:42] 
[2025-06-05 08:17:42] 2025-06-05 08:17:23,681 | INFO     | **************************************
[2025-06-05 08:17:42] 2025-06-05 08:17:23,842 | INFO     | PID=1198600 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 08:17:42] 2025-06-05 08:17:23,842 | INFO     | .. there are 2 such processes running
[2025-06-05 08:17:42] 2025-06-05 08:17:24,183 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 08:17:42] 2025-06-05 08:17:24,190 | INFO     | sufficient remaining disk space (184280940544 B)
[2025-06-05 08:17:42] 2025-06-05 08:17:24,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 08:17:42] 2025-06-05 08:17:24,191 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 08:17:42] 2025-06-05 08:17:24,191 | INFO     | update_server=False
[2025-06-05 08:17:42] 2025-06-05 08:17:24,191 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 08:17:42] 2025-06-05 08:17:24,191 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:17:42] 2025-06-05 08:17:24,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 08:17:42] 2025-06-05 08:17:24,191 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 08:17:42] 2025-06-05 08:17:24,191 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 08:17:42] 2025-06-05 08:17:24,191 | INFO     | aborting loop
[2025-06-05 08:17:42] 2025-06-05 08:17:24,192 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 08:17:42] 2025-06-05 08:17:24,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 08:17:42] 2025-06-05 08:17:24,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 08:17:42] 2025-06-05 08:17:24,402 | INFO     | all payload control threads have been joined
[2025-06-05 08:17:42] 2025-06-05 08:17:24,503 | INFO     | all data control threads have been joined
[2025-06-05 08:17:42] 2025-06-05 08:17:24,971 | INFO     | all job control threads have been joined
[2025-06-05 08:17:42] 2025-06-05 08:17:25,195 | INFO     | [job] job monitor thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:25,195 | INFO     | [job] queue monitor thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:25,196 | INFO     | [job] retrieve thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:25,408 | INFO     | [payload] control thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:25,411 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:25,509 | INFO     | [data] control thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:25,541 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 08:17:42] 2025-06-05 08:17:25,692 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:25,695 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:25,879 | INFO     | [job] validate thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:25,977 | INFO     | [job] control thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:26,099 | INFO     | [data] copytool_in thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:26,245 | INFO     | [payload] validate_post thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:26,756 | INFO     | [payload] failed_post thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:27,543 | INFO     | [data] copytool_out thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:28,195 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:34,604 | INFO     | job.realtimelogging is not enabled
[2025-06-05 08:17:42] 2025-06-05 08:17:35,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 08:17:42] 2025-06-05 08:17:37,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747401287488)>', '<ExcThread(monitor, started 139746793731840)>']
[2025-06-05 08:17:42] 2025-06-05 08:17:38,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 08:17:42] 2025-06-05 08:17:38,261 | INFO     | [monitor] control thread has ended
[2025-06-05 08:17:42] 2025-06-05 08:17:42,394 | INFO     | all workflow threads have been joined
[2025-06-05 08:17:42] 2025-06-05 08:17:42,395 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 08:17:42] 2025-06-05 08:17:42,395 | INFO     | traces error code: 0
[2025-06-05 08:17:42] 2025-06-05 08:17:42,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 08:17:42] 2025-06-05 08:17:42,512 [wrapper] ==== pilot stdout END ====
[2025-06-05 08:17:42] 2025-06-05 08:17:42,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 08:17:42] 2025-06-05 08:17:42,515 [wrapper] pilotpid: 1198600
[2025-06-05 08:17:42] 2025-06-05 08:17:42,517 [wrapper] Pilot exit status: 0
[2025-06-05 08:17:42] 2025-06-05 08:17:42,522 [wrapper] pandaids: 6677580191
[2025-06-05 08:17:42] 2025-06-05 08:17:42,530 [wrapper] cleanup supervisor_pilot 1234639 1198601
[2025-06-05 08:17:42] 2025-06-05 08:17:42,532 [wrapper] Test setup, not cleaning
[2025-06-05 08:17:42] 2025-06-05 08:17:42,533 [wrapper] apfmon messages muted
[2025-06-05 08:17:42] 2025-06-05 08:17:42,534 [wrapper] ==== wrapper stdout END ====
[2025-06-05 08:17:42] 2025-06-05 08:17:42,535 [wrapper] ==== wrapper stderr END ====
[2025-06-05 08:17:42]  *** Error codes and diagnostics ***
[2025-06-05 08:17:42]     "exeErrorCode": 0,
[2025-06-05 08:17:42]     "exeErrorDiag": "",
[2025-06-05 08:17:42]     "pilotErrorCode": 0,
[2025-06-05 08:17:42]     "pilotErrorDiag": "",
[2025-06-05 08:17:42]  *** Listing of results directory ***
[2025-06-05 08:17:42] total 395412
[2025-06-05 08:17:42] -rw-r--r-- 1 boinc boinc    495897 Jun  3 10:57 pilot3.tar.gz
[2025-06-05 08:17:42] -rwx------ 1 boinc boinc     37140 Jun  3 11:12 runpilot2-wrapper.sh
[2025-06-05 08:17:42] -rw-r--r-- 1 boinc boinc      5111 Jun  3 11:12 queuedata.json
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc       100 Jun  5 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 08:17:42] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 05:13 run_atlas
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc       105 Jun  5 05:13 job.xml
[2025-06-05 08:17:42] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:13 start_atlas.sh
[2025-06-05 08:17:42] drwxrwx--x 2 boinc boinc      4096 Jun  5 05:13 shared
[2025-06-05 08:17:42] -rw-r--r-- 2 boinc boinc    508879 Jun  5 05:13 input.tar.gz
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc      9361 Jun  5 05:13 init_data.xml
[2025-06-05 08:17:42] -rw-r--r-- 2 boinc boinc 216996957 Jun  5 05:13 EVNT.45006593._001207.pool.root.1
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc         0 Jun  5 05:13 boinc_lockfile
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 05:13 pandaJob.out
[2025-06-05 08:17:42] -rw------- 1 boinc boinc    987109 Jun  5 05:14 agis_schedconf.cvmfs.json
[2025-06-05 08:17:42] drwx------ 4 boinc boinc      4096 Jun  5 05:14 pilot3
[2025-06-05 08:17:42] -rw------- 1 boinc boinc 181114527 Jun  5 08:16 HITS.45006595._030170.pool.root.1
[2025-06-05 08:17:42] -rw------- 1 boinc boinc      1018 Jun  5 08:16 memory_monitor_summary.json
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc       530 Jun  5 08:16 boinc_task_state.xml
[2025-06-05 08:17:42] -rw------- 1 boinc boinc   1598969 Jun  5 08:16 agis_ddmendpoints.agis.ALL.json
[2025-06-05 08:17:42] -rw------- 1 boinc boinc    429570 Jun  5 08:16 log.45006595._030170.job.log.tgz.1
[2025-06-05 08:17:42] -rw------- 1 boinc boinc        95 Jun  5 08:16 pilot_heartbeat.json
[2025-06-05 08:17:42] -rw------- 1 boinc boinc      7664 Jun  5 08:17 heartbeat.json
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 08:17 boinc_mmap_file
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc        28 Jun  5 08:17 wrapper_checkpoint.txt
[2025-06-05 08:17:42] -rw------- 1 boinc boinc      4966 Jun  5 08:17 pilotlog.txt
[2025-06-05 08:17:42] -rw------- 1 boinc boinc   1050521 Jun  5 08:17 log.45006595._030170.job.log.1
[2025-06-05 08:17:42] -rw------- 1 boinc boinc       357 Jun  5 08:17 output.list
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc       620 Jun  5 08:17 runtime_log
[2025-06-05 08:17:42] -rw------- 1 boinc boinc   1495040 Jun  5 08:17 result.tar.gz
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc      8959 Jun  5 08:17 runtime_log.err
[2025-06-05 08:17:42] -rw------- 1 boinc boinc       652 Jun  5 08:17 FSaKDmAkeg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmAQYKDmIZWRon.diag
[2025-06-05 08:17:42] -rw-rw-r-- 1 boinc boinc     20998 Jun  5 08:17 stderr.txt
[2025-06-05 08:17:42] HITS file was successfully produced:
[2025-06-05 08:17:42] -rw------- 1 boinc boinc 181114527 Jun  5 08:16 shared/HITS.pool.root.1
[2025-06-05 08:17:42]  *** Contents of shared directory: ***
[2025-06-05 08:17:42] total 390768
[2025-06-05 08:17:42] -rw-r--r-- 2 boinc boinc     15093 Jun  5 05:13 start_atlas.sh
[2025-06-05 08:17:42] -rw-r--r-- 2 boinc boinc    508879 Jun  5 05:13 input.tar.gz
[2025-06-05 08:17:42] -rw-r--r-- 2 boinc boinc 216996957 Jun  5 05:13 ATLAS.root_0
[2025-06-05 08:17:42] -rw------- 1 boinc boinc 181114527 Jun  5 08:16 HITS.pool.root.1
[2025-06-05 08:17:42] -rw------- 1 boinc boinc   1495040 Jun  5 08:17 result.tar.gz
08:17:43 (1188423): run_atlas exited; CPU time 21603.692174
08:17:43 (1188423): called boinc_finish(0)

</stderr_txt>
]]>

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