Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:17:49 (1239391): wrapper (7.7.26015): starting
08:17:49 (1239391): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 08:17:49] Arguments: --nthreads 12
[2025-06-05 08:17:49] Threads: 12
[2025-06-05 08:17:49] Checking for CVMFS
[2025-06-05 08:17:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 08:17:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 08:17:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 08:17:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 08:17:50] 2.12.7.0 359462 2809 61028 146812 1 55 4056948 4096001 1 130560 0 2356212 99.992 640639 128 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 08:17:50] CVMFS is ok
[2025-06-05 08:17:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 08:17:50] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 08:17:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 08:17:50] Further information can be found at the LHC@home message board.
[2025-06-05 08:17:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 08:17:50] Checking for apptainer binary...
[2025-06-05 08:17:50] apptainer is not installed, using version from CVMFS
[2025-06-05 08:17:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 08:17:50] ggg3250
[2025-06-05 08:17:50] apptainer works
[2025-06-05 08:17:50] Set ATHENA_PROC_NUMBER=12
[2025-06-05 08:17:50] Set ATHENA_CORE_NUMBER=12
[2025-06-05 08:17:50] Starting ATLAS job with PandaID=6677578660
[2025-06-05 08:17:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:38:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:38:07] 2025-06-05 11:37:45,611 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:38:07] 2025-06-05 11:37:45,611 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:38:07] 2025-06-05 11:37:45,611 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:38:07] 2025-06-05 11:37:45,611 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:38:07] 2025-06-05 11:37:45,613 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:38:07] 2025-06-05 11:37:45,613 | INFO     | sum of square deviations: 2299188580.8718076
[2025-06-05 11:38:07] 2025-06-05 11:37:45,614 | INFO     | sum of deviations: -24431409880.000008
[2025-06-05 11:38:07] 2025-06-05 11:37:45,614 | INFO     | mean x: 1749117412.025641
[2025-06-05 11:38:07] 2025-06-05 11:37:45,614 | INFO     | mean y: 2701621.6
[2025-06-05 11:38:07] 2025-06-05 11:37:45,614 | INFO     | -- intersect: 18588999751.716675
[2025-06-05 11:38:07] 2025-06-05 11:37:45,614 | INFO     | intersect: 18588999751.716675
[2025-06-05 11:38:07] 2025-06-05 11:37:45,614 | INFO     | chi2: 2.0830043196715677
[2025-06-05 11:38:07] 2025-06-05 11:37:45,622 | INFO     | sum of square deviations: 2126824083.3684247
[2025-06-05 11:38:07] 2025-06-05 11:37:45,623 | INFO     | sum of deviations: -10348616535.6842
[2025-06-05 11:38:07] 2025-06-05 11:37:45,623 | INFO     | mean x: 1749117259.5263157
[2025-06-05 11:38:07] 2025-06-05 11:37:45,623 | INFO     | mean y: 2713837.9368421054
[2025-06-05 11:38:07] 2025-06-05 11:37:45,623 | INFO     | -- intersect: 8513499443.729269
[2025-06-05 11:38:07] 2025-06-05 11:37:45,623 | INFO     | intersect: 8513499443.729269
[2025-06-05 11:38:07] 2025-06-05 11:37:45,623 | INFO     | chi2: 1.3790395607377453
[2025-06-05 11:38:07] 2025-06-05 11:37:45,624 | INFO     | current chi2=1.3790395607377453 (change=33.79564565880585 %)
[2025-06-05 11:38:07] 2025-06-05 11:37:45,624 | INFO     | sum of square deviations: 1963296960.8648727
[2025-06-05 11:38:07] 2025-06-05 11:37:45,624 | INFO     | sum of deviations: -9752891301.081078
[2025-06-05 11:38:07] 2025-06-05 11:37:45,624 | INFO     | mean x: 1749117107.0270271
[2025-06-05 11:38:07] 2025-06-05 11:37:45,624 | INFO     | mean y: 2714393.6162162162
[2025-06-05 11:38:07] 2025-06-05 11:37:45,624 | INFO     | -- intersect: 8691643963.486877
[2025-06-05 11:38:07] 2025-06-05 11:37:45,624 | INFO     | intersect: 8691643963.486877
[2025-06-05 11:38:07] 2025-06-05 11:37:45,625 | INFO     | chi2: 1.3786404654922007
[2025-06-05 11:38:07] 2025-06-05 11:37:45,625 | INFO     | current chi2=1.3786404654922007 (change=0.028940086775400158 %)
[2025-06-05 11:38:07] 2025-06-05 11:37:45,625 | INFO     | right removable region: 184
[2025-06-05 11:38:07] 2025-06-05 11:37:45,625 | INFO     | sum of square deviations: 2126821033.3684247
[2025-06-05 11:38:07] 2025-06-05 11:37:45,625 | INFO     | sum of deviations: -52004357528.6842
[2025-06-05 11:38:07] 2025-06-05 11:37:45,625 | INFO     | mean x: 1749117564.5263157
[2025-06-05 11:38:07] 2025-06-05 11:37:45,625 | INFO     | mean y: 2725682.736842105
[2025-06-05 11:38:07] 2025-06-05 11:37:45,625 | INFO     | -- intersect: 42771597044.35966
[2025-06-05 11:38:07] 2025-06-05 11:37:45,626 | INFO     | intersect: 42771597044.35966
[2025-06-05 11:38:07] 2025-06-05 11:37:45,626 | INFO     | chi2: 0.8043800981808988
[2025-06-05 11:38:07] 2025-06-05 11:37:45,626 | INFO     | current chi2=0.8043800981808988 (change=61.383656741157054 %)
[2025-06-05 11:38:07] 2025-06-05 11:37:45,626 | INFO     | sum of square deviations: 1963290860.8648727
[2025-06-05 11:38:07] 2025-06-05 11:37:45,642 | INFO     | sum of deviations: -49227923213.7027
[2025-06-05 11:38:07] 2025-06-05 11:37:45,643 | INFO     | mean x: 1749117717.0270271
[2025-06-05 11:38:07] 2025-06-05 11:37:45,643 | INFO     | mean y: 2723088.5405405406
[2025-06-05 11:38:07] 2025-06-05 11:37:45,643 | INFO     | -- intersect: 43860428730.58796
[2025-06-05 11:38:07] 2025-06-05 11:37:45,643 | INFO     | intersect: 43860428730.58796
[2025-06-05 11:38:07] 2025-06-05 11:37:45,643 | INFO     | chi2: 0.8043505419668768
[2025-06-05 11:38:07] 2025-06-05 11:37:45,643 | INFO     | current chi2=0.8043505419668768 (change=0.003674408913006387 %)
[2025-06-05 11:38:07] 2025-06-05 11:37:45,643 | INFO     | left removable region: 20
[2025-06-05 11:38:07] 2025-06-05 11:37:45,643 | INFO     | sum of square deviations: 1367726510.8475583
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | sum of deviations: -28052394104.006115
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | mean x: 1749117686.5304878
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | mean y: 2731433.701219512
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | -- intersect: 35877548721.86994
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | intersect: 35877548721.86994
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | chi2: 0.07658222930283748
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | -- intersect: 35877548721.86994
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | current memory leak: -20.51 B/s (using 164 data points, chi2=0.08)
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | ..............................
[2025-06-05 11:38:07] 2025-06-05 11:37:45,644 | INFO     | . Timing measurements:
[2025-06-05 11:38:07] 2025-06-05 11:37:45,645 | INFO     | . get job = 0 s
[2025-06-05 11:38:07] 2025-06-05 11:37:45,645 | INFO     | . initial setup = 2 s
[2025-06-05 11:38:07] 2025-06-05 11:37:45,645 | INFO     | . payload setup = 2 s
[2025-06-05 11:38:07] 2025-06-05 11:37:45,645 | INFO     | . stage-in = 0 s
[2025-06-05 11:38:07] 2025-06-05 11:37:45,645 | INFO     | . payload execution = 11890 s
[2025-06-05 11:38:07] 2025-06-05 11:37:45,645 | INFO     | . stage-out = 2 s
[2025-06-05 11:38:07] 2025-06-05 11:37:45,645 | INFO     | . log creation = 0 s
[2025-06-05 11:38:07] 2025-06-05 11:37:45,645 | INFO     | ..............................
[2025-06-05 11:38:07] 2025-06-05 11:37:46,054 | INFO     | 
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | job summary report
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | --------------------------------------------------
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | PanDA job id: 6677578660
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | task id: 45006595
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | errors: (none)
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | pilot state: finished 
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | transexitcode: 0
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | exeerrorcode: 0
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | exeerrordiag: 
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | exitcode: 0
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | exitmsg: OK
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | cpuconsumptiontime: 21888 s
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | nevents: 400
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | neventsw: 0
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | pid: 1259176
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | pgrp: 1259176
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | corecount: 12
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | event service: False
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | sizes: {0: 2397365, 1: 2397365, 2: 2397599, 11: 2397627, 11896: 2426845, 11897: 2426844, 11900: 2436015, 11904: 2436071, 11977: 2436241}
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | --------------------------------------------------
[2025-06-05 11:38:07] 2025-06-05 11:37:46,055 | INFO     | 
[2025-06-05 11:38:07] 2025-06-05 11:37:46,056 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,099 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:38:07] 2025-06-05 11:37:46,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:38:07] 2025-06-05 11:37:46,100 | INFO     | job 6677578660 has completed (purged errors)
[2025-06-05 11:38:07] 2025-06-05 11:37:46,100 | INFO     | overall cleanup function is called
[2025-06-05 11:38:07] 2025-06-05 11:37:47,102 | INFO     | --- collectZombieJob: --- 10, [1259176]
[2025-06-05 11:38:07] 2025-06-05 11:37:47,103 | INFO     | zombie collector waiting for pid 1259176
[2025-06-05 11:38:07] 2025-06-05 11:37:47,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:38:07] 2025-06-05 11:37:47,103 | INFO     | collected zombie processes
[2025-06-05 11:38:07] 2025-06-05 11:37:47,103 | INFO     | will attempt to kill all subprocesses of pid=1259176
[2025-06-05 11:38:07] 2025-06-05 11:37:47,210 | INFO     | process IDs to be killed: [1259176] (in reverse order)
[2025-06-05 11:38:07] 2025-06-05 11:37:47,275 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:38:07] 2025-06-05 11:37:47,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:38:07] 2025-06-05 11:37:47,276 | INFO     | did not find any defunct processes belonging to 1259176
[2025-06-05 11:38:07] 2025-06-05 11:37:47,277 | INFO     | did not find any defunct processes belonging to 1259176
[2025-06-05 11:38:07] 2025-06-05 11:37:47,277 | INFO     | ready for new job
[2025-06-05 11:38:07] 2025-06-05 11:37:47,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:38:07] 2025-06-05 11:37:47,278 | INFO     | **************************************
[2025-06-05 11:38:07] 2025-06-05 11:37:47,278 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:38:07] 2025-06-05 11:37:47,278 | INFO     | **************************************
[2025-06-05 11:38:07] 2025-06-05 11:37:47,278 | INFO     | 
[2025-06-05 11:38:07] 2025-06-05 11:37:47,295 | INFO     | architecture information:
[2025-06-05 11:38:07] 2025-06-05 11:37:47,299 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:38:07] 2025-06-05 11:37:47,439 | INFO     | cat /etc/os-release:
[2025-06-05 11:38:07] NAME="CentOS Linux"
[2025-06-05 11:38:07] VERSION="7 (Core)"
[2025-06-05 11:38:07] ID="centos"
[2025-06-05 11:38:07] ID_LIKE="rhel fedora"
[2025-06-05 11:38:07] VERSION_ID="7"
[2025-06-05 11:38:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:38:07] ANSI_COLOR="0;31"
[2025-06-05 11:38:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:38:07] HOME_URL="https://www.centos.org/"
[2025-06-05 11:38:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:38:07] 
[2025-06-05 11:38:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:38:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:38:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:38:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:38:07] 
[2025-06-05 11:38:07] 2025-06-05 11:37:47,439 | INFO     | **************************************
[2025-06-05 11:38:07] 2025-06-05 11:37:47,943 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-06-05 11:38:07] 2025-06-05 11:37:48,007 | INFO     | sufficient remaining disk space (186605633536 B)
[2025-06-05 11:38:07] 2025-06-05 11:37:48,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:38:07] 2025-06-05 11:37:48,008 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:38:07] 2025-06-05 11:37:48,008 | INFO     | update_server=False
[2025-06-05 11:38:07] 2025-06-05 11:37:48,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:38:07] 2025-06-05 11:37:48,106 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 11:38:07] 2025-06-05 11:37:48,108 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 11:38:07] 2025-06-05 11:37:48,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:38:07] 2025-06-05 11:37:48,108 | INFO     | will abort loop
[2025-06-05 11:38:07] 2025-06-05 11:37:48,126 | INFO     | all data control threads have been joined
[2025-06-05 11:38:07] 2025-06-05 11:37:48,502 | INFO     | all payload control threads have been joined
[2025-06-05 11:38:07] 2025-06-05 11:37:48,923 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:38:07] 2025-06-05 11:37:48,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:38:07] 2025-06-05 11:37:48,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:38:07] 2025-06-05 11:37:49,015 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:49,111 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:49,131 | INFO     | [data] control thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:49,179 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:49,230 | INFO     | all job control threads have been joined
[2025-06-05 11:38:07] 2025-06-05 11:37:49,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:38:07] 2025-06-05 11:37:49,507 | INFO     | [payload] control thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:49,775 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:50,010 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:50,234 | INFO     | [job] control thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:50,262 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:50,310 | INFO     | [job] validate thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:50,502 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:38:07] 2025-06-05 11:37:50,511 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:50,574 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:50,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:38:07] 2025-06-05 11:37:51,426 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:51,866 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:54,518 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:37:58,586 | INFO     | job.realtimelogging is not enabled
[2025-06-05 11:38:07] 2025-06-05 11:37:59,590 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:38:07] 2025-06-05 11:38:00,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686426482496)>', '<ExcThread(monitor, started 139685624018688)>']
[2025-06-05 11:38:07] 2025-06-05 11:38:00,970 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:38:07] 2025-06-05 11:38:00,971 | INFO     | [monitor] control thread has ended
[2025-06-05 11:38:07] 2025-06-05 11:38:05,822 | INFO     | all workflow threads have been joined
[2025-06-05 11:38:07] 2025-06-05 11:38:05,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:38:07] 2025-06-05 11:38:05,823 | INFO     | traces error code: 0
[2025-06-05 11:38:07] 2025-06-05 11:38:05,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:38:07] 2025-06-05 11:38:06,063 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:38:07] 2025-06-05 11:38:06,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:38:07] 2025-06-05 11:38:06,146 [wrapper] pilotpid: 1246347
[2025-06-05 11:38:07] 2025-06-05 11:38:06,160 [wrapper] Pilot exit status: 0
[2025-06-05 11:38:07] 2025-06-05 11:38:06,303 [wrapper] pandaids: 6677578660
[2025-06-05 11:38:07] 2025-06-05 11:38:06,375 [wrapper] cleanup supervisor_pilot 1299421 1246348
[2025-06-05 11:38:07] 2025-06-05 11:38:06,391 [wrapper] Test setup, not cleaning
[2025-06-05 11:38:07] 2025-06-05 11:38:06,407 [wrapper] apfmon messages muted
[2025-06-05 11:38:07] 2025-06-05 11:38:06,431 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:38:07] 2025-06-05 11:38:06,447 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:38:07]  *** Error codes and diagnostics ***
[2025-06-05 11:38:07]     "exeErrorCode": 0,
[2025-06-05 11:38:07]     "exeErrorDiag": "",
[2025-06-05 11:38:07]     "pilotErrorCode": 0,
[2025-06-05 11:38:07]     "pilotErrorDiag": "",
[2025-06-05 11:38:07]  *** Listing of results directory ***
[2025-06-05 11:38:07] total 389400
[2025-06-05 11:38:07] -rw-r--r-- 1 boinc boinc    495897 Jun  3 10:43 pilot3.tar.gz
[2025-06-05 11:38:07] -rw-r--r-- 1 boinc boinc      5111 Jun  3 10:54 queuedata.json
[2025-06-05 11:38:07] -rwx------ 1 boinc boinc     37140 Jun  3 10:54 runpilot2-wrapper.sh
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc       100 Jun  5 08:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:38:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 08:17 run_atlas
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc       105 Jun  5 08:17 job.xml
[2025-06-05 11:38:07] -rw-r--r-- 2 boinc boinc     15093 Jun  5 08:17 start_atlas.sh
[2025-06-05 11:38:07] drwxrwx--x 2 boinc boinc      4096 Jun  5 08:17 shared
[2025-06-05 11:38:07] -rw-r--r-- 2 boinc boinc    508884 Jun  5 08:17 input.tar.gz
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc      9361 Jun  5 08:17 init_data.xml
[2025-06-05 11:38:07] -rw-r--r-- 2 boinc boinc 214069261 Jun  5 08:17 EVNT.45006593._001184.pool.root.1
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc         0 Jun  5 08:17 boinc_lockfile
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc      2525 Jun  5 08:17 pandaJob.out
[2025-06-05 11:38:07] -rw------- 1 boinc boinc    983281 Jun  5 08:17 agis_schedconf.cvmfs.json
[2025-06-05 11:38:07] drwx------ 4 boinc boinc      4096 Jun  5 08:17 pilot3
[2025-06-05 11:38:07] -rw------- 1 boinc boinc 177703936 Jun  5 11:35 HITS.45006595._029619.pool.root.1
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc       530 Jun  5 11:35 boinc_task_state.xml
[2025-06-05 11:38:07] -rw------- 1 boinc boinc      1021 Jun  5 11:36 memory_monitor_summary.json
[2025-06-05 11:38:07] -rw------- 1 boinc boinc   1598969 Jun  5 11:36 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:38:07] -rw------- 1 boinc boinc    437664 Jun  5 11:36 log.45006595._029619.job.log.tgz.1
[2025-06-05 11:38:07] -rw------- 1 boinc boinc        95 Jun  5 11:37 pilot_heartbeat.json
[2025-06-05 11:38:07] -rw------- 1 boinc boinc      7671 Jun  5 11:37 heartbeat.json
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 11:38 boinc_mmap_file
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc        28 Jun  5 11:38 wrapper_checkpoint.txt
[2025-06-05 11:38:07] -rw------- 1 boinc boinc      4635 Jun  5 11:38 pilotlog.txt
[2025-06-05 11:38:07] -rw------- 1 boinc boinc   1129173 Jun  5 11:38 log.45006595._029619.job.log.1
[2025-06-05 11:38:07] -rw------- 1 boinc boinc       357 Jun  5 11:38 output.list
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc       620 Jun  5 11:38 runtime_log
[2025-06-05 11:38:07] -rw------- 1 boinc boinc   1587200 Jun  5 11:38 result.tar.gz
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc      8959 Jun  5 11:38 runtime_log.err
[2025-06-05 11:38:07] -rw------- 1 boinc boinc       651 Jun  5 11:38 2XwMDm2Seg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3MYKDmFtsPYo.diag
[2025-06-05 11:38:07] -rw-rw-r-- 1 boinc boinc     21014 Jun  5 11:38 stderr.txt
[2025-06-05 11:38:07] HITS file was successfully produced:
[2025-06-05 11:38:07] -rw------- 1 boinc boinc 177703936 Jun  5 11:35 shared/HITS.pool.root.1
[2025-06-05 11:38:07]  *** Contents of shared directory: ***
[2025-06-05 11:38:07] total 384672
[2025-06-05 11:38:07] -rw-r--r-- 2 boinc boinc     15093 Jun  5 08:17 start_atlas.sh
[2025-06-05 11:38:07] -rw-r--r-- 2 boinc boinc    508884 Jun  5 08:17 input.tar.gz
[2025-06-05 11:38:07] -rw-r--r-- 2 boinc boinc 214069261 Jun  5 08:17 ATLAS.root_0
[2025-06-05 11:38:07] -rw------- 1 boinc boinc 177703936 Jun  5 11:35 HITS.pool.root.1
[2025-06-05 11:38:07] -rw------- 1 boinc boinc   1587200 Jun  5 11:38 result.tar.gz
11:38:09 (1239391): run_atlas exited; CPU time 21932.202425
11:38:09 (1239391): called boinc_finish(0)

</stderr_txt>
]]>

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