Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:47:57 (3171989): wrapper (7.7.26015): starting
21:47:57 (3171989): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 21:47:57] Arguments: --nthreads 4
[2025-06-04 21:47:57] Threads: 4
[2025-06-04 21:47:57] Checking for CVMFS
[2025-06-04 21:47:57] No cvmfs_config command found, will try listing directly
[2025-06-04 21:47:57] CVMFS is ok
[2025-06-04 21:47:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 21:47:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 21:47:57] Further information can be found at the LHC@home message board.
[2025-06-04 21:47:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 21:47:57] Checking for apptainer binary...
[2025-06-04 21:47:57] which: no apptainer in ((null))
[2025-06-04 21:47:57] apptainer is not installed, using version from CVMFS
[2025-06-04 21:47:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 21:47:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-04 21:47:57] apptainer works
[2025-06-04 21:47:57] Set ATHENA_PROC_NUMBER=4
[2025-06-04 21:47:57] Set ATHENA_CORE_NUMBER=4
[2025-06-04 21:47:57] Starting ATLAS job with PandaID=6677579368
[2025-06-04 21:47:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:48:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:48:49] 2025-06-04 21:48:29,525 | INFO     | executing command: lscpu
[2025-06-04 23:48:49] 2025-06-04 21:48:29,629 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 23:48:49] 2025-06-04 21:48:31,826 | INFO     | monitor loop #508: job 0:6677579368 is in state 'finished'
[2025-06-04 23:48:49] 2025-06-04 21:48:31,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:48:49] 2025-06-04 21:48:34,333 | INFO     | monitor loop #509: job 0:6677579368 is in state 'finished'
[2025-06-04 23:48:49] 2025-06-04 21:48:34,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 23:48:49] 2025-06-04 21:48:35,343 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 23:48:49] 2025-06-04 21:48:35,343 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6677579368/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 23:48:49] 2025-06-04 21:48:35,345 | INFO     | extracted standard info from prmon json
[2025-06-04 23:48:49] 2025-06-04 21:48:35,345 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 23:48:49] 2025-06-04 21:48:35,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 23:48:49] 2025-06-04 21:48:35,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 23:48:49] 2025-06-04 21:48:35,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:48:49] 2025-06-04 21:48:35,348 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:48:49] 2025-06-04 21:48:35,348 | INFO     | sum of square deviations: 509440249.5
[2025-06-04 23:48:49] 2025-06-04 21:48:35,348 | INFO     | sum of deviations: 15710110708.5
[2025-06-04 23:48:49] 2025-06-04 21:48:35,349 | INFO     | mean x: 1749070086.5
[2025-06-04 23:48:49] 2025-06-04 21:48:35,349 | INFO     | mean y: 2282962.8898305083
[2025-06-04 23:48:49] 2025-06-04 21:48:35,349 | INFO     | -- intersect: -53935513908.89164
[2025-06-04 23:48:49] 2025-06-04 21:48:35,349 | INFO     | intersect: -53935513908.89164
[2025-06-04 23:48:49] 2025-06-04 21:48:35,349 | INFO     | chi2: 1.4951566904458407
[2025-06-04 23:48:49] 2025-06-04 21:48:35,349 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,350 | INFO     | sum of deviations: 14952512516.0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,350 | INFO     | mean x: 1749069934.0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,350 | INFO     | mean y: 2281099.8407079647
[2025-06-04 23:48:49] 2025-06-04 21:48:35,350 | INFO     | -- intersect: -58455403208.69171
[2025-06-04 23:48:49] 2025-06-04 21:48:35,350 | INFO     | intersect: -58455403208.69171
[2025-06-04 23:48:49] 2025-06-04 21:48:35,351 | INFO     | chi2: 1.4975971537137096
[2025-06-04 23:48:49] 2025-06-04 21:48:35,351 | INFO     | current chi2=1.4975971537137096 (change=-0.16322458264499565 %)
[2025-06-04 23:48:49] 2025-06-04 21:48:35,351 | INFO     | right removable region: 112
[2025-06-04 23:48:49] 2025-06-04 21:48:35,351 | INFO     | sum of square deviations: 447383272.0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,351 | INFO     | sum of deviations: -904262231.0000001
[2025-06-04 23:48:49] 2025-06-04 21:48:35,352 | INFO     | mean x: 1749070239.0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,352 | INFO     | mean y: 2322999.079646018
[2025-06-04 23:48:49] 2025-06-04 21:48:35,352 | INFO     | -- intersect: 3537587403.185134
[2025-06-04 23:48:49] 2025-06-04 21:48:35,352 | INFO     | intersect: 3537587403.185134
[2025-06-04 23:48:49] 2025-06-04 21:48:35,352 | INFO     | chi2: 0.0029110096833290045
[2025-06-04 23:48:49] 2025-06-04 21:48:35,352 | INFO     | current chi2=0.0029110096833290045 (change=99.80530403924014 %)
[2025-06-04 23:48:49] 2025-06-04 21:48:35,352 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,353 | INFO     | sum of deviations: -725721269.9999999
[2025-06-04 23:48:49] 2025-06-04 21:48:35,353 | INFO     | mean x: 1749070391.5
[2025-06-04 23:48:49] 2025-06-04 21:48:35,353 | INFO     | mean y: 2322504.407407407
[2025-06-04 23:48:49] 2025-06-04 21:48:35,353 | INFO     | -- intersect: 3252182746.604198
[2025-06-04 23:48:49] 2025-06-04 21:48:35,353 | INFO     | intersect: 3252182746.604198
[2025-06-04 23:48:49] 2025-06-04 21:48:35,353 | INFO     | chi2: 0.0027287163072403993
[2025-06-04 23:48:49] 2025-06-04 21:48:35,353 | INFO     | current chi2=0.0027287163072403993 (change=6.262204386765767 %)
[2025-06-04 23:48:49] 2025-06-04 21:48:35,353 | INFO     | left removable region: 20
[2025-06-04 23:48:49] 2025-06-04 21:48:35,354 | INFO     | sum of square deviations: 241429643.0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,354 | INFO     | sum of deviations: 32534532.999999955
[2025-06-04 23:48:49] 2025-06-04 21:48:35,354 | INFO     | mean x: 1749070513.5
[2025-06-04 23:48:49] 2025-06-04 21:48:35,354 | INFO     | mean y: 2319529.152173913
[2025-06-04 23:48:49] 2025-06-04 21:48:35,354 | INFO     | -- intersect: -233381404.80808803
[2025-06-04 23:48:49] 2025-06-04 21:48:35,354 | INFO     | intersect: -233381404.80808803
[2025-06-04 23:48:49] 2025-06-04 21:48:35,354 | INFO     | chi2: 0.0015601444744607297
[2025-06-04 23:48:49] 2025-06-04 21:48:35,355 | INFO     | -- intersect: -233381404.80808803
[2025-06-04 23:48:49] 2025-06-04 21:48:35,355 | INFO     | current memory leak: 0.13 B/s (using 92 data points, chi2=0.00)
[2025-06-04 23:48:49] 2025-06-04 21:48:35,355 | INFO     | ..............................
[2025-06-04 23:48:49] 2025-06-04 21:48:35,355 | INFO     | . Timing measurements:
[2025-06-04 23:48:49] 2025-06-04 21:48:35,355 | INFO     | . get job = 0 s
[2025-06-04 23:48:49] 2025-06-04 21:48:35,355 | INFO     | . initial setup = 1 s
[2025-06-04 23:48:49] 2025-06-04 21:48:35,355 | INFO     | . payload setup = 7 s
[2025-06-04 23:48:49] 2025-06-04 21:48:35,356 | INFO     | . stage-in = 0 s
[2025-06-04 23:48:49] 2025-06-04 21:48:35,356 | INFO     | . payload execution = 7191 s
[2025-06-04 23:48:49] 2025-06-04 21:48:35,356 | INFO     | . stage-out = 0 s
[2025-06-04 23:48:49] 2025-06-04 21:48:35,356 | INFO     | . log creation = 0 s
[2025-06-04 23:48:49] 2025-06-04 21:48:35,356 | INFO     | ..............................
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | 
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | job summary report
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | --------------------------------------------------
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | PanDA job id: 6677579368
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | task id: 45006595
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | errors: (none)
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | pilot state: finished 
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | transexitcode: 0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | exeerrorcode: 0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | exeerrordiag: 
[2025-06-04 23:48:49] 2025-06-04 21:48:35,416 | INFO     | exitcode: 0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | exitmsg: OK
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | cpuconsumptiontime: 27766 s
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | nevents: 400
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | neventsw: 0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | pid: 3188112
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | pgrp: 3188112
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | corecount: 4
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | event service: False
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | sizes: {0: 2396512, 1: 2397380, 7: 2397586, 12: 2397614, 7203: 2425164, 7204: 2434129, 7205: 2434313, 7211: 2434483}
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | --------------------------------------------------
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | 
[2025-06-04 23:48:49] 2025-06-04 21:48:35,417 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-06-04 23:48:49] 2025-06-04 21:48:35,434 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,436 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:48:49] 2025-06-04 21:48:35,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,436 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:48:49] 2025-06-04 21:48:35,436 | INFO     | job 6677579368 has completed (purged errors)
[2025-06-04 23:48:49] 2025-06-04 21:48:35,436 | INFO     | overall cleanup function is called
[2025-06-04 23:48:49] 2025-06-04 21:48:36,445 | INFO     | --- collectZombieJob: --- 10, [3188112]
[2025-06-04 23:48:49] 2025-06-04 21:48:36,445 | INFO     | zombie collector waiting for pid 3188112
[2025-06-04 23:48:49] 2025-06-04 21:48:36,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:48:49] 2025-06-04 21:48:36,446 | INFO     | collected zombie processes
[2025-06-04 23:48:49] 2025-06-04 21:48:36,446 | INFO     | will attempt to kill all subprocesses of pid=3188112
[2025-06-04 23:48:49] 2025-06-04 21:48:37,036 | INFO     | process IDs to be killed: [3188112] (in reverse order)
[2025-06-04 23:48:49] 2025-06-04 21:48:37,254 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:48:49] 2025-06-04 21:48:37,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:48:49] 2025-06-04 21:48:37,340 | INFO     | did not find any defunct processes belonging to 3188112
[2025-06-04 23:48:49] 2025-06-04 21:48:37,418 | INFO     | did not find any defunct processes belonging to 3188112
[2025-06-04 23:48:49] 2025-06-04 21:48:37,419 | INFO     | ready for new job
[2025-06-04 23:48:49] 2025-06-04 21:48:37,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:48:49] 2025-06-04 21:48:37,421 | INFO     | **************************************
[2025-06-04 23:48:49] 2025-06-04 21:48:37,421 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:48:49] 2025-06-04 21:48:37,421 | INFO     | **************************************
[2025-06-04 23:48:49] 2025-06-04 21:48:37,421 | INFO     | 
[2025-06-04 23:48:49] 2025-06-04 21:48:37,432 | INFO     | architecture information:
[2025-06-04 23:48:49] 2025-06-04 21:48:37,432 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:48:49] 2025-06-04 21:48:37,452 | INFO     | cat /etc/os-release:
[2025-06-04 23:48:49] NAME="CentOS Linux"
[2025-06-04 23:48:49] VERSION="7 (Core)"
[2025-06-04 23:48:49] ID="centos"
[2025-06-04 23:48:49] ID_LIKE="rhel fedora"
[2025-06-04 23:48:49] VERSION_ID="7"
[2025-06-04 23:48:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:48:49] ANSI_COLOR="0;31"
[2025-06-04 23:48:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:48:49] HOME_URL="https://www.centos.org/"
[2025-06-04 23:48:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:48:49] 
[2025-06-04 23:48:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:48:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:48:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:48:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:48:49] 
[2025-06-04 23:48:49] 2025-06-04 21:48:37,453 | INFO     | **************************************
[2025-06-04 23:48:49] 2025-06-04 21:48:37,956 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-06-04 23:48:49] 2025-06-04 21:48:37,982 | INFO     | sufficient remaining disk space (3214996930560 B)
[2025-06-04 23:48:49] 2025-06-04 21:48:37,983 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:48:49] 2025-06-04 21:48:37,983 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:48:49] 2025-06-04 21:48:37,983 | INFO     | update_server=False
[2025-06-04 23:48:49] 2025-06-04 21:48:37,983 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:48:49] 2025-06-04 21:48:37,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:48:49] 2025-06-04 21:48:37,984 | INFO     | aborting loop
[2025-06-04 23:48:49] 2025-06-04 21:48:38,121 | INFO     | PID=3178369 has CPU usage=17.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 23:48:49] 2025-06-04 21:48:38,121 | INFO     | .. there are 13 such processes running
[2025-06-04 23:48:49] 2025-06-04 21:48:38,121 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:48:49] 2025-06-04 21:48:38,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:48:49] 2025-06-04 21:48:38,121 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:48:49] 2025-06-04 21:48:38,667 | INFO     | all data control threads have been joined
[2025-06-04 23:48:49] 2025-06-04 21:48:38,836 | INFO     | all payload control threads have been joined
[2025-06-04 23:48:49] 2025-06-04 21:48:38,909 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:48:49] 2025-06-04 21:48:38,986 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:38,989 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:39,025 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:39,133 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:39,225 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:39,283 | INFO     | all job control threads have been joined
[2025-06-04 23:48:49] 2025-06-04 21:48:39,670 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:39,672 | INFO     | [data] control thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:39,729 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:39,811 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:39,822 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:39,841 | INFO     | [payload] control thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:40,025 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:48:49] 2025-06-04 21:48:40,179 | INFO     | [job] validate thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:40,288 | INFO     | [job] control thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:40,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:48:49] 2025-06-04 21:48:40,914 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:41,432 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:44,031 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:48:49] 2025-06-04 21:48:44,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23290789680960)>', '<ExcThread(monitor, started 23290544342784)>']
[2025-06-04 23:48:49] 2025-06-04 21:48:45,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:48:49] 2025-06-04 21:48:45,152 | INFO     | [monitor] control thread has ended
[2025-06-04 23:48:49] 2025-06-04 21:48:49,574 | INFO     | all workflow threads have been joined
[2025-06-04 23:48:49] 2025-06-04 21:48:49,575 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:48:49] 2025-06-04 21:48:49,575 | INFO     | traces error code: 0
[2025-06-04 23:48:49] 2025-06-04 21:48:49,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:48:49] 2025-06-04 21:48:49,694 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:48:49] 2025-06-04 21:48:49,696 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:48:49] 2025-06-04 21:48:49,699 [wrapper] pilotpid: 3178369
[2025-06-04 23:48:49] 2025-06-04 21:48:49,702 [wrapper] Pilot exit status: 0
[2025-06-04 23:48:49] 2025-06-04 21:48:49,715 [wrapper] pandaids: 6677579368
[2025-06-04 23:48:49] 2025-06-04 21:48:49,851 [wrapper] cleanup supervisor_pilot 3607858 3178370
[2025-06-04 23:48:49] 2025-06-04 21:48:49,856 [wrapper] Test setup, not cleaning
[2025-06-04 23:48:49] 2025-06-04 21:48:49,859 [wrapper] apfmon messages muted
[2025-06-04 23:48:49] 2025-06-04 21:48:49,862 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:48:49] 2025-06-04 21:48:49,865 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:48:49]  *** Error codes and diagnostics ***
[2025-06-04 23:48:49]     "exeErrorCode": 0,
[2025-06-04 23:48:49]     "exeErrorDiag": "",
[2025-06-04 23:48:49]     "pilotErrorCode": 0,
[2025-06-04 23:48:49]     "pilotErrorDiag": "",
[2025-06-04 23:48:49]  *** Listing of results directory ***
[2025-06-04 23:48:49] total 391760
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc    495897 Jun  3 12:57 pilot3.tar.gz
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc      5111 Jun  3 13:00 queuedata.json
[2025-06-04 23:48:49] -rwx------ 1 boinc boinc     37140 Jun  3 13:01 runpilot2-wrapper.sh
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc       100 Jun  4 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:48:49] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 21:47 run_atlas
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc       105 Jun  4 21:47 job.xml
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc      6686 Jun  4 21:47 init_data.xml
[2025-06-04 23:48:49] -rw-r--r-- 2 boinc boinc 216147974 Jun  4 21:47 EVNT.45006593._001188.pool.root.1
[2025-06-04 23:48:49] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:47 start_atlas.sh
[2025-06-04 23:48:49] drwxrwx--x 2 boinc boinc      4096 Jun  4 21:47 shared
[2025-06-04 23:48:49] -rw-r--r-- 2 boinc boinc    508878 Jun  4 21:47 input.tar.gz
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc         0 Jun  4 21:47 boinc_lockfile
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc      2524 Jun  4 21:47 pandaJob.out
[2025-06-04 23:48:49] -rw------- 1 boinc boinc    991007 Jun  4 21:48 agis_schedconf.cvmfs.json
[2025-06-04 23:48:49] -rw------- 1 boinc boinc   1598969 Jun  4 21:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:48:49] drwx------ 4 boinc boinc      4096 Jun  4 21:48 pilot3
[2025-06-04 23:48:49] -rw------- 1 boinc boinc 179298212 Jun  4 23:47 HITS.45006595._029701.pool.root.1
[2025-06-04 23:48:49] -rw------- 1 boinc boinc        95 Jun  4 23:48 pilot_heartbeat.json
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc       528 Jun  4 23:48 boinc_task_state.xml
[2025-06-04 23:48:49] -rw------- 1 boinc boinc      1030 Jun  4 23:48 memory_monitor_summary.json
[2025-06-04 23:48:49] -rw------- 1 boinc boinc    255067 Jun  4 23:48 log.45006595._029701.job.log.tgz.1
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc      8192 Jun  4 23:48 boinc_mmap_file
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc        26 Jun  4 23:48 wrapper_checkpoint.txt
[2025-06-04 23:48:49] -rw------- 1 boinc boinc      7694 Jun  4 23:48 heartbeat.json
[2025-06-04 23:48:49] -rw------- 1 boinc boinc      4761 Jun  4 23:48 pilotlog.txt
[2025-06-04 23:48:49] -rw------- 1 boinc boinc    685029 Jun  4 23:48 log.45006595._029701.job.log.1
[2025-06-04 23:48:49] -rw------- 1 boinc boinc       357 Jun  4 23:48 output.list
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc       620 Jun  4 23:48 runtime_log
[2025-06-04 23:48:49] -rw------- 1 boinc boinc    962560 Jun  4 23:48 result.tar.gz
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc      9040 Jun  4 23:48 runtime_log.err
[2025-06-04 23:48:49] -rw------- 1 boinc boinc       662 Jun  4 23:48 YqBODmCaeg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAcjKDmJoFezn.diag
[2025-06-04 23:48:49] -rw-r--r-- 1 boinc boinc     21014 Jun  4 23:48 stderr.txt
[2025-06-04 23:48:49] HITS file was successfully produced:
[2025-06-04 23:48:49] -rw------- 1 boinc boinc 179298212 Jun  4 23:47 shared/HITS.pool.root.1
[2025-06-04 23:48:49]  *** Contents of shared directory: ***
[2025-06-04 23:48:49] total 387640
[2025-06-04 23:48:49] -rw-r--r-- 2 boinc boinc 216147974 Jun  4 21:47 ATLAS.root_0
[2025-06-04 23:48:49] -rw-r--r-- 2 boinc boinc     15093 Jun  4 21:47 start_atlas.sh
[2025-06-04 23:48:49] -rw-r--r-- 2 boinc boinc    508878 Jun  4 21:47 input.tar.gz
[2025-06-04 23:48:49] -rw------- 1 boinc boinc 179298212 Jun  4 23:47 HITS.pool.root.1
[2025-06-04 23:48:49] -rw------- 1 boinc boinc    962560 Jun  4 23:48 result.tar.gz
23:48:51 (3171989): run_atlas exited; CPU time 28153.838755
23:48:51 (3171989): called boinc_finish(0)

</stderr_txt>
]]>

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