Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:18:41 (3469): wrapper (7.7.26015): starting
04:18:41 (3469): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 04:18:41] Arguments: --nthreads 8
[2025-06-04 04:18:41] Threads: 8
[2025-06-04 04:18:41] Checking for CVMFS
[2025-06-04 04:18:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 04:18:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 04:18:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 04:18:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 04:18:43] 2.11.2.0 16797 32632 106092 146763 0 114 19541681 25165825 4395 130560 0 13679134 99.809 17753918 2152 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 04:18:43] CVMFS is ok
[2025-06-04 04:18:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 04:18:43] Checking for apptainer binary...
[2025-06-04 04:18:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 04:18:43] Running /usr/bin/apptainer --version
[2025-06-04 04:18:43] apptainer version 1.3.2-1.el7
[2025-06-04 04:18:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 04:18:45] cg-vwn223.simple-grid.lan
[2025-06-04 04:18:45] apptainer works
[2025-06-04 04:18:45] Set ATHENA_PROC_NUMBER=8
[2025-06-04 04:18:45] Set ATHENA_CORE_NUMBER=8
[2025-06-04 04:18:45] Starting ATLAS job with PandaID=6677578721
[2025-06-04 04:18:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:36:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:36:58] 2025-06-04 06:05:17,184 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:36:58] 2025-06-04 06:05:17,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:36:58] 2025-06-04 06:05:17,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:36:58] 2025-06-04 06:05:17,190 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:36:58] 2025-06-04 06:05:17,190 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,192 | INFO     | sum of deviations: -15763484244.500006
[2025-06-04 10:36:58] 2025-06-04 06:05:17,192 | INFO     | mean x: 1749010302.5
[2025-06-04 10:36:58] 2025-06-04 06:05:17,193 | INFO     | mean y: 2495148.213636364
[2025-06-04 10:36:58] 2025-06-04 06:05:17,193 | INFO     | -- intersect: 8352891530.994548
[2025-06-04 10:36:58] 2025-06-04 06:05:17,193 | INFO     | intersect: 8352891530.994548
[2025-06-04 10:36:58] 2025-06-04 06:05:17,193 | INFO     | chi2: 2.443641395041224
[2025-06-04 10:36:58] 2025-06-04 06:05:17,194 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,195 | INFO     | sum of deviations: -971740186.9999989
[2025-06-04 10:36:58] 2025-06-04 06:05:17,196 | INFO     | mean x: 1749010150.0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,196 | INFO     | mean y: 2505213.665116279
[2025-06-04 10:36:58] 2025-06-04 06:05:17,196 | INFO     | -- intersect: 554021174.0862297
[2025-06-04 10:36:58] 2025-06-04 06:05:17,196 | INFO     | intersect: 554021174.0862297
[2025-06-04 10:36:58] 2025-06-04 06:05:17,196 | INFO     | chi2: 1.6734032007219388
[2025-06-04 10:36:58] 2025-06-04 06:05:17,196 | INFO     | current chi2=1.6734032007219388 (change=31.52009930271669 %)
[2025-06-04 10:36:58] 2025-06-04 06:05:17,197 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 10:36:58] 2025-06-04 06:05:17,198 | INFO     | sum of deviations: -1004729627.4999969
[2025-06-04 10:36:58] 2025-06-04 06:05:17,199 | INFO     | mean x: 1749009997.5
[2025-06-04 10:36:58] 2025-06-04 06:05:17,199 | INFO     | mean y: 2505189.719047619
[2025-06-04 10:36:58] 2025-06-04 06:05:17,199 | INFO     | -- intersect: 614453923.8897624
[2025-06-04 10:36:58] 2025-06-04 06:05:17,199 | INFO     | intersect: 614453923.8897624
[2025-06-04 10:36:58] 2025-06-04 06:05:17,199 | INFO     | chi2: 1.6732081760143955
[2025-06-04 10:36:58] 2025-06-04 06:05:17,200 | INFO     | current chi2=1.6732081760143955 (change=0.011654376390528735 %)
[2025-06-04 10:36:58] 2025-06-04 06:05:17,200 | INFO     | right removable region: 209
[2025-06-04 10:36:58] 2025-06-04 06:05:17,200 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,202 | INFO     | sum of deviations: -50095398013.00001
[2025-06-04 10:36:58] 2025-06-04 06:05:17,202 | INFO     | mean x: 1749010455.0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,202 | INFO     | mean y: 2518711.134883721
[2025-06-04 10:36:58] 2025-06-04 06:05:17,202 | INFO     | -- intersect: 28434415153.61502
[2025-06-04 10:36:58] 2025-06-04 06:05:17,202 | INFO     | intersect: 28434415153.61502
[2025-06-04 10:36:58] 2025-06-04 06:05:17,203 | INFO     | chi2: 0.9681534157811249
[2025-06-04 10:36:58] 2025-06-04 06:05:17,203 | INFO     | current chi2=0.9681534157811249 (change=60.38070816177215 %)
[2025-06-04 10:36:58] 2025-06-04 06:05:17,203 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 10:36:58] 2025-06-04 06:05:17,205 | INFO     | sum of deviations: -46095398866.5
[2025-06-04 10:36:58] 2025-06-04 06:05:17,205 | INFO     | mean x: 1749010607.5
[2025-06-04 10:36:58] 2025-06-04 06:05:17,205 | INFO     | mean y: 2515779.1476190477
[2025-06-04 10:36:58] 2025-06-04 06:05:17,205 | INFO     | -- intersect: 28077761152.087204
[2025-06-04 10:36:58] 2025-06-04 06:05:17,205 | INFO     | intersect: 28077761152.087204
[2025-06-04 10:36:58] 2025-06-04 06:05:17,205 | INFO     | chi2: 0.9577186461687088
[2025-06-04 10:36:58] 2025-06-04 06:05:17,205 | INFO     | current chi2=0.9577186461687088 (change=1.077801249505183 %)
[2025-06-04 10:36:58] 2025-06-04 06:05:17,206 | INFO     | left removable region: 20
[2025-06-04 10:36:58] 2025-06-04 06:05:17,206 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,207 | INFO     | sum of deviations: -18060107678.999996
[2025-06-04 10:36:58] 2025-06-04 06:05:17,207 | INFO     | mean x: 1749010577.0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,207 | INFO     | mean y: 2516573.693121693
[2025-06-04 10:36:58] 2025-06-04 06:05:17,208 | INFO     | -- intersect: 15091538611.849916
[2025-06-04 10:36:58] 2025-06-04 06:05:17,208 | INFO     | intersect: 15091538611.849916
[2025-06-04 10:36:58] 2025-06-04 06:05:17,208 | INFO     | chi2: 0.12962492252027993
[2025-06-04 10:36:58] 2025-06-04 06:05:17,208 | INFO     | -- intersect: 15091538611.849916
[2025-06-04 10:36:58] 2025-06-04 06:05:17,208 | INFO     | current memory leak: -8.63 B/s (using 189 data points, chi2=0.13)
[2025-06-04 10:36:58] 2025-06-04 06:05:17,209 | INFO     | ..............................
[2025-06-04 10:36:58] 2025-06-04 06:05:17,209 | INFO     | . Timing measurements:
[2025-06-04 10:36:58] 2025-06-04 06:05:17,209 | INFO     | . get job = 0 s
[2025-06-04 10:36:58] 2025-06-04 06:05:17,209 | INFO     | . initial setup = 2 s
[2025-06-04 10:36:58] 2025-06-04 06:05:17,209 | INFO     | . payload setup = 22 s
[2025-06-04 10:36:58] 2025-06-04 06:05:17,210 | INFO     | . stage-in = 0 s
[2025-06-04 10:36:58] 2025-06-04 06:05:17,210 | INFO     | . payload execution = 13417 s
[2025-06-04 10:36:58] 2025-06-04 06:05:17,210 | INFO     | . stage-out = 2 s
[2025-06-04 10:36:58] 2025-06-04 06:05:17,210 | INFO     | . log creation = 0 s
[2025-06-04 10:36:58] 2025-06-04 06:05:17,210 | INFO     | ..............................
[2025-06-04 10:36:58] 2025-06-04 06:05:17,357 | INFO     | 
[2025-06-04 10:36:58] 2025-06-04 06:05:17,357 | INFO     | job summary report
[2025-06-04 10:36:58] 2025-06-04 06:05:17,357 | INFO     | --------------------------------------------------
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | PanDA job id: 6677578721
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | task id: 45006595
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | errors: (none)
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | pilot state: finished 
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | transexitcode: 0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | exeerrorcode: 0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | exeerrordiag: 
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | exitcode: 0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,358 | INFO     | exitmsg: OK
[2025-06-04 10:36:58] 2025-06-04 06:05:17,359 | INFO     | cpuconsumptiontime: 51717 s
[2025-06-04 10:36:58] 2025-06-04 06:05:17,359 | INFO     | nevents: 400
[2025-06-04 10:36:58] 2025-06-04 06:05:17,359 | INFO     | neventsw: 0
[2025-06-04 10:36:58] 2025-06-04 06:05:17,359 | INFO     | pid: 17722
[2025-06-04 10:36:58] 2025-06-04 06:05:17,359 | INFO     | pgrp: 17722
[2025-06-04 10:36:58] 2025-06-04 06:05:17,359 | INFO     | corecount: 8
[2025-06-04 10:36:58] 2025-06-04 06:05:17,359 | INFO     | event service: False
[2025-06-04 10:36:58] 2025-06-04 06:05:17,359 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405446, 23: 2405446, 13444: 2435125, 13447: 2444066, 13451: 2444250, 13538: 2444420}
[2025-06-04 10:36:58] 2025-06-04 06:05:17,359 | INFO     | --------------------------------------------------
[2025-06-04 10:36:58] 2025-06-04 06:05:17,360 | INFO     | 
[2025-06-04 10:36:58] 2025-06-04 06:05:17,360 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 10:36:58] 2025-06-04 06:05:17,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,708 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,708 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,708 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,708 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,709 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:36:58] 2025-06-04 06:05:17,710 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:36:58] 2025-06-04 06:05:17,710 | INFO     | job 6677578721 has completed (purged errors)
[2025-06-04 10:36:58] 2025-06-04 06:05:17,710 | INFO     | overall cleanup function is called
[2025-06-04 10:36:58] 2025-06-04 06:05:18,719 | INFO     | --- collectZombieJob: --- 10, [17722]
[2025-06-04 10:36:58] 2025-06-04 06:05:18,719 | INFO     | zombie collector waiting for pid 17722
[2025-06-04 10:36:58] 2025-06-04 06:05:18,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:36:58] 2025-06-04 06:05:18,719 | INFO     | collected zombie processes
[2025-06-04 10:36:58] 2025-06-04 06:05:18,720 | INFO     | will attempt to kill all subprocesses of pid=17722
[2025-06-04 10:36:58] 2025-06-04 06:05:18,884 | INFO     | process IDs to be killed: [17722] (in reverse order)
[2025-06-04 10:36:58] 2025-06-04 06:05:19,008 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:36:58] 2025-06-04 06:05:19,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:36:58] 2025-06-04 06:05:19,012 | INFO     | did not find any defunct processes belonging to 17722
[2025-06-04 10:36:58] 2025-06-04 06:05:19,015 | INFO     | did not find any defunct processes belonging to 17722
[2025-06-04 10:36:58] 2025-06-04 06:05:19,015 | INFO     | ready for new job
[2025-06-04 10:36:58] 2025-06-04 06:05:19,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:36:58] 2025-06-04 06:05:19,018 | INFO     | **************************************
[2025-06-04 10:36:58] 2025-06-04 06:05:19,018 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:36:58] 2025-06-04 06:05:19,018 | INFO     | **************************************
[2025-06-04 10:36:58] 2025-06-04 06:05:19,018 | INFO     | 
[2025-06-04 10:36:58] 2025-06-04 06:05:19,019 | INFO     | pilot is running in a VM
[2025-06-04 10:36:58] 2025-06-04 06:05:19,019 | INFO     | architecture information:
[2025-06-04 10:36:58] 2025-06-04 06:05:19,022 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:36:58] 2025-06-04 06:05:19,164 | INFO     | cat /etc/os-release:
[2025-06-04 10:36:58] NAME="CentOS Linux"
[2025-06-04 10:36:58] VERSION="7 (Core)"
[2025-06-04 10:36:58] ID="centos"
[2025-06-04 10:36:58] ID_LIKE="rhel fedora"
[2025-06-04 10:36:58] VERSION_ID="7"
[2025-06-04 10:36:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:36:58] ANSI_COLOR="0;31"
[2025-06-04 10:36:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:36:58] HOME_URL="https://www.centos.org/"
[2025-06-04 10:36:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:36:58] 
[2025-06-04 10:36:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:36:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:36:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:36:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:36:58] 
[2025-06-04 10:36:58] 2025-06-04 06:05:19,165 | INFO     | **************************************
[2025-06-04 10:36:58] 2025-06-04 06:05:19,558 | INFO     | PID=7159 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 10:36:58] 2025-06-04 06:05:19,558 | INFO     | .. there are 9 such processes running
[2025-06-04 10:36:58] 2025-06-04 06:05:19,668 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 10:36:58] 2025-06-04 06:05:19,934 | INFO     | sufficient remaining disk space (496471375872 B)
[2025-06-04 10:36:58] 2025-06-04 06:05:19,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:36:58] 2025-06-04 06:05:19,935 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:36:58] 2025-06-04 06:05:19,935 | INFO     | update_server=False
[2025-06-04 10:36:58] 2025-06-04 06:05:19,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:36:58] 2025-06-04 06:05:19,936 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:36:58] 2025-06-04 06:05:19,936 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:36:58] 2025-06-04 06:05:19,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:36:58] 2025-06-04 06:05:19,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:36:58] 2025-06-04 06:05:19,937 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:36:58] 2025-06-04 06:05:19,937 | INFO     | aborting loop
[2025-06-04 10:36:58] 2025-06-04 06:05:19,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:36:58] 2025-06-04 06:05:20,324 | INFO     | all payload control threads have been joined
[2025-06-04 10:36:58] 2025-06-04 06:05:20,434 | INFO     | all data control threads have been joined
[2025-06-04 10:36:58] 2025-06-04 06:05:20,941 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:20,943 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:20,979 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:21,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:21,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:36:58] 2025-06-04 06:05:21,330 | INFO     | [payload] control thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:21,440 | INFO     | [data] control thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:21,547 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:21,590 | INFO     | all job control threads have been joined
[2025-06-04 10:36:58] 2025-06-04 06:05:21,615 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:21,767 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:21,944 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:22,030 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:22,189 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:22,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:36:58] 2025-06-04 06:05:22,428 | INFO     | [job] validate thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:22,596 | INFO     | [job] control thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:23,376 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:25,311 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:36:58] 2025-06-04 06:05:26,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926985697088)>', '<ExcThread(monitor, started 139926377051904)>']
[2025-06-04 10:36:58] 2025-06-04 06:05:26,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:36:58] 2025-06-04 06:05:26,981 | INFO     | [monitor] control thread has ended
[2025-06-04 10:36:58] 2025-06-04 06:05:31,940 | INFO     | all workflow threads have been joined
[2025-06-04 10:36:58] 2025-06-04 06:05:31,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:36:58] 2025-06-04 06:05:31,941 | INFO     | traces error code: 0
[2025-06-04 10:36:58] 2025-06-04 06:05:31,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:36:58] 2025-06-04 06:05:32,363 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:36:58] 2025-06-04 06:05:32,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:36:58] 2025-06-04 06:05:32,576 [wrapper] pilotpid: 7159
[2025-06-04 10:36:58] 2025-06-04 06:05:32,649 [wrapper] Pilot exit status: 0
[2025-06-04 10:36:58] 2025-06-04 06:05:33,091 [wrapper] pandaids: 6677578721
[2025-06-04 10:36:58] 2025-06-04 06:05:33,818 [wrapper] cleanup supervisor_pilot 17800 7160
[2025-06-04 10:36:58] 2025-06-04 06:05:33,919 [wrapper] Test setup, not cleaning
[2025-06-04 10:36:58] 2025-06-04 06:05:34,033 [wrapper] apfmon messages muted
[2025-06-04 10:36:58] 2025-06-04 06:05:34,093 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:36:58] 2025-06-04 06:05:34,169 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:36:58]  *** Error codes and diagnostics ***
[2025-06-04 10:36:58]     "exeErrorCode": 0,
[2025-06-04 10:36:58]     "exeErrorDiag": "",
[2025-06-04 10:36:58]     "pilotErrorCode": 0,
[2025-06-04 10:36:58]     "pilotErrorDiag": "",
[2025-06-04 10:36:58]  *** Listing of results directory ***
[2025-06-04 10:36:58] total 399588
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc    495897 Jun  3 12:57 pilot3.tar.gz
[2025-06-04 10:36:58] -rwx------. 1 boinc boinc     37140 Jun  3 13:00 runpilot2-wrapper.sh
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc      5111 Jun  3 13:00 queuedata.json
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc       100 Jun  4 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:36:58] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 04:18 run_atlas
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc       105 Jun  4 04:18 job.xml
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc      6392 Jun  4 04:18 init_data.xml
[2025-06-04 10:36:58] -rw-r--r--. 2 boinc boinc 218083566 Jun  4 04:18 EVNT.45006593._001187.pool.root.1
[2025-06-04 10:36:58] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:18 start_atlas.sh
[2025-06-04 10:36:58] drwxrwx--x. 2 boinc boinc        68 Jun  4 04:18 shared
[2025-06-04 10:36:58] -rw-r--r--. 2 boinc boinc    508876 Jun  4 04:18 input.tar.gz
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc         0 Jun  4 04:18 boinc_lockfile
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc      2525 Jun  4 04:18 pandaJob.out
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc    986077 Jun  4 04:19 agis_schedconf.cvmfs.json
[2025-06-04 10:36:58] drwx------. 4 boinc boinc      4096 Jun  4 04:19 pilot3
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc 184191771 Jun  4 08:02 HITS.45006595._029680.pool.root.1
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc       531 Jun  4 08:02 boinc_task_state.xml
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc      1018 Jun  4 08:03 memory_monitor_summary.json
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc   1603667 Jun  4 08:03 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc    372968 Jun  4 08:03 log.45006595._029680.job.log.tgz.1
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc        95 Jun  4 08:04 pilot_heartbeat.json
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc      7687 Jun  4 08:05 heartbeat.json
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc      4930 Jun  4 08:05 pilotlog.txt
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc   1168648 Jun  4 08:05 log.45006595._029680.job.log.1
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc       357 Jun  4 08:05 output.list
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc       620 Jun  4 08:05 runtime_log
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc   1556480 Jun  4 08:05 result.tar.gz
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc      8659 Jun  4 08:05 runtime_log.err
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc       657 Jun  4 08:05 otoLDm4Yeg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmbNYKDmF1hM1m.diag
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc      8192 Jun  4 10:36 boinc_mmap_file
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc        28 Jun  4 10:36 wrapper_checkpoint.txt
[2025-06-04 10:36:58] -rw-r--r--. 1 boinc boinc     20585 Jun  4 10:36 stderr.txt
[2025-06-04 10:36:58] HITS file was successfully produced:
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc 184191771 Jun  4 08:02 shared/HITS.pool.root.1
[2025-06-04 10:36:58]  *** Contents of shared directory: ***
[2025-06-04 10:36:58] total 394888
[2025-06-04 10:36:58] -rw-r--r--. 2 boinc boinc 218083566 Jun  4 04:18 ATLAS.root_0
[2025-06-04 10:36:58] -rw-r--r--. 2 boinc boinc     15093 Jun  4 04:18 start_atlas.sh
[2025-06-04 10:36:58] -rw-r--r--. 2 boinc boinc    508876 Jun  4 04:18 input.tar.gz
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc 184191771 Jun  4 08:02 HITS.pool.root.1
[2025-06-04 10:36:58] -rw-------. 1 boinc boinc   1556480 Jun  4 08:05 result.tar.gz
10:37:00 (3469): run_atlas exited; CPU time 51894.372523
10:37:00 (3469): called boinc_finish(0)

</stderr_txt>
]]>

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