Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:31:59 (1435): wrapper (7.7.26015): starting
09:31:59 (1435): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:31:59] Arguments: --nthreads 8
[2025-06-03 09:31:59] Threads: 8
[2025-06-03 09:31:59] Checking for CVMFS
[2025-06-03 09:31:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:31:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:31:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:31:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:31:59] 2.11.2.0 96941 11300 261844 146743 0 63 10310636 18432000 5001 130560 0 52210106 99.512 44583063 41406 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 09:31:59] CVMFS is ok
[2025-06-03 09:31:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:31:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:31:59] Further information can be found at the LHC@home message board.
[2025-06-03 09:31:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:31:59] Checking for apptainer binary...
[2025-06-03 09:31:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:31:59] Running /usr/bin/apptainer --version
[2025-06-03 09:31:59] apptainer version 1.3.2-1.el7
[2025-06-03 09:31:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:31:59] c-212-6.aglt2.org
[2025-06-03 09:31:59] apptainer works
[2025-06-03 09:31:59] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:31:59] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:31:59] Starting ATLAS job with PandaID=6668989097
[2025-06-03 09:31:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:53:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:53:40]  filetype=log
[2025-06-03 10:53:40]  guid=28cabb99-292b-437c-8740-593e080ada7f
[2025-06-03 10:53:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 10:53:40]  is_altstaged=None
[2025-06-03 10:53:40]  is_tar=False
[2025-06-03 10:53:40]  lfn=log.44871837._091437.job.log.tgz.1
[2025-06-03 10:53:40]  mtime=0
[2025-06-03 10:53:40]  protocol_id=None
[2025-06-03 10:53:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 10:53:40]  replicas=None
[2025-06-03 10:53:40]  scope=mc23_13p6TeV
[2025-06-03 10:53:40]  status=None
[2025-06-03 10:53:40]  status_code=0
[2025-06-03 10:53:40]  storage_token=
[2025-06-03 10:53:40]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6668989097/log.44871837._091437.job.log.tgz.1
[2025-06-03 10:53:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/79/log.44871837._091437.job.log.tgz.1
[2025-06-03 10:53:40]  workdir=None
[2025-06-03 10:53:40] ]
[2025-06-03 10:53:40] 2025-06-03 14:53:15,301 | INFO     | transferring file log.44871837._091437.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6668989097/log.44871837._091437.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 10:53:40] 2025-06-03 14:53:15,301 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6668989097/log.44871837._091437.job.log.tgz.1 /tmp/boinchome/slots/5/log.44871837._091437.job
[2025-06-03 10:53:40] 2025-06-03 14:53:15,322 | INFO     | adding to output.list: log.44871837._091437.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/79/log.44871837._091437.job.log.tg
[2025-06-03 10:53:40] 2025-06-03 14:53:15,322 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 10:53:40] 2025-06-03 14:53:15,322 | INFO     | summary of transferred files:
[2025-06-03 10:53:40] 2025-06-03 14:53:15,322 | INFO     |  -- lfn=log.44871837._091437.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 10:53:40] 2025-06-03 14:53:15,322 | INFO     | stage-out finished correctly
[2025-06-03 10:53:40] 2025-06-03 14:53:15,627 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 10:53:40] 2025-06-03 14:53:15,928 | INFO     | monitor loop #372: job 0:6668989097 is in state 'finished'
[2025-06-03 10:53:40] 2025-06-03 14:53:15,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 10:53:40] 2025-06-03 14:53:18,368 | INFO     | job 6668989097 has state=finished
[2025-06-03 10:53:40] 2025-06-03 14:53:18,368 | INFO     | preparing for final server update for job 6668989097 in state='finished'
[2025-06-03 10:53:40] 2025-06-03 14:53:18,369 | INFO     | this job has now completed (state=finished)
[2025-06-03 10:53:40] 2025-06-03 14:53:18,369 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 10:53:40] 2025-06-03 14:53:18,369 | INFO     | log transfer has been attempted: DONE
[2025-06-03 10:53:40] 2025-06-03 14:53:18,369 | INFO     | job 6668989097 has finished - writing final server update
[2025-06-03 10:53:40] 2025-06-03 14:53:18,369 | INFO     | total number of processed events: 400 (read)
[2025-06-03 10:53:40] 2025-06-03 14:53:18,372 | INFO     | executing command: lscpu
[2025-06-03 10:53:40] 2025-06-03 14:53:18,415 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 10:53:40] 2025-06-03 14:53:18,431 | INFO     | monitor loop #373: job 0:6668989097 is in state 'finished'
[2025-06-03 10:53:40] 2025-06-03 14:53:18,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 10:53:40] 2025-06-03 14:53:20,883 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 10:53:40] 2025-06-03 14:53:20,883 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6668989097/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:53:40] 2025-06-03 14:53:20,884 | INFO     | extracted standard info from prmon json
[2025-06-03 10:53:40] 2025-06-03 14:53:20,884 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:53:40] 2025-06-03 14:53:20,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:53:40] 2025-06-03 14:53:20,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:53:40] 2025-06-03 14:53:20,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:53:40] 2025-06-03 14:53:20,885 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:53:40] 2025-06-03 14:53:20,885 | INFO     | sum of square deviations: 120605052.0
[2025-06-03 10:53:40] 2025-06-03 14:53:20,885 | INFO     | sum of deviations: -1398675222.0
[2025-06-03 10:53:40] 2025-06-03 14:53:20,885 | INFO     | mean x: 1748960047.0
[2025-06-03 10:53:40] 2025-06-03 14:53:20,885 | INFO     | mean y: 2506514.808219178
[2025-06-03 10:53:40] 2025-06-03 14:53:20,885 | INFO     | -- intersect: 20285463500.779716
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | intersect: 20285463500.779716
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | chi2: 0.002389136238569067
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | -- intersect: 20285463500.779716
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | current memory leak: -11.60 B/s (using 73 data points, chi2=0.00)
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | ..............................
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | . Timing measurements:
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | . get job = 0 s
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | . initial setup = 1 s
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | . payload setup = 4 s
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | . stage-in = 0 s
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | . payload execution = 4847 s
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | . stage-out = 0 s
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | . log creation = 0 s
[2025-06-03 10:53:40] 2025-06-03 14:53:20,886 | INFO     | ..............................
[2025-06-03 10:53:40] 2025-06-03 14:53:20,924 | INFO     | 
[2025-06-03 10:53:40] 2025-06-03 14:53:20,924 | INFO     | job summary report
[2025-06-03 10:53:40] 2025-06-03 14:53:20,924 | INFO     | --------------------------------------------------
[2025-06-03 10:53:40] 2025-06-03 14:53:20,924 | INFO     | PanDA job id: 6668989097
[2025-06-03 10:53:40] 2025-06-03 14:53:20,924 | INFO     | task id: 44871837
[2025-06-03 10:53:40] 2025-06-03 14:53:20,924 | INFO     | errors: (none)
[2025-06-03 10:53:40] 2025-06-03 14:53:20,924 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:53:40] 2025-06-03 14:53:20,924 | INFO     | pilot state: finished 
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | transexitcode: 0
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | exeerrorcode: 0
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | exeerrordiag: 
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | exitcode: 0
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | exitmsg: OK
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | cpuconsumptiontime: 36741 s
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | nevents: 400
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | neventsw: 0
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | pid: 12944
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | pgrp: 12944
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | corecount: 8
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | event service: False
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | sizes: {0: 2405012, 1: 2405211, 3: 2405417, 11: 2405445, 4855: 2431735, 4857: 2440860, 4862: 2440974}
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | --------------------------------------------------
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | 
[2025-06-03 10:53:40] 2025-06-03 14:53:20,925 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-06-03 10:53:40] 2025-06-03 14:53:20,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | job 6668989097 has completed (purged errors)
[2025-06-03 10:53:40] 2025-06-03 14:53:20,947 | INFO     | overall cleanup function is called
[2025-06-03 10:53:40] 2025-06-03 14:53:21,953 | INFO     | --- collectZombieJob: --- 10, [12944]
[2025-06-03 10:53:40] 2025-06-03 14:53:21,954 | INFO     | zombie collector waiting for pid 12944
[2025-06-03 10:53:40] 2025-06-03 14:53:21,954 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:53:40] 2025-06-03 14:53:21,954 | INFO     | collected zombie processes
[2025-06-03 10:53:40] 2025-06-03 14:53:21,954 | INFO     | will attempt to kill all subprocesses of pid=12944
[2025-06-03 10:53:40] 2025-06-03 14:53:22,072 | INFO     | process IDs to be killed: [12944] (in reverse order)
[2025-06-03 10:53:40] 2025-06-03 14:53:22,150 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:53:40] 2025-06-03 14:53:22,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:53:40] 2025-06-03 14:53:22,155 | INFO     | did not find any defunct processes belonging to 12944
[2025-06-03 10:53:40] 2025-06-03 14:53:22,158 | INFO     | did not find any defunct processes belonging to 12944
[2025-06-03 10:53:40] 2025-06-03 14:53:22,158 | INFO     | ready for new job
[2025-06-03 10:53:40] 2025-06-03 14:53:22,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:53:40] 2025-06-03 14:53:22,159 | INFO     | **************************************
[2025-06-03 10:53:40] 2025-06-03 14:53:22,159 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:53:40] 2025-06-03 14:53:22,159 | INFO     | **************************************
[2025-06-03 10:53:40] 2025-06-03 14:53:22,159 | INFO     | 
[2025-06-03 10:53:40] 2025-06-03 14:53:22,162 | INFO     | architecture information:
[2025-06-03 10:53:40] 2025-06-03 14:53:22,162 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:53:40] 2025-06-03 14:53:22,179 | INFO     | cat /etc/os-release:
[2025-06-03 10:53:40] NAME="CentOS Linux"
[2025-06-03 10:53:40] VERSION="7 (Core)"
[2025-06-03 10:53:40] ID="centos"
[2025-06-03 10:53:40] ID_LIKE="rhel fedora"
[2025-06-03 10:53:40] VERSION_ID="7"
[2025-06-03 10:53:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:53:40] ANSI_COLOR="0;31"
[2025-06-03 10:53:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:53:40] HOME_URL="https://www.centos.org/"
[2025-06-03 10:53:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:53:40] 
[2025-06-03 10:53:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:53:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:53:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:53:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:53:40] 
[2025-06-03 10:53:40] 2025-06-03 14:53:22,179 | INFO     | **************************************
[2025-06-03 10:53:40] 2025-06-03 14:53:22,682 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-06-03 10:53:40] 2025-06-03 14:53:22,695 | INFO     | sufficient remaining disk space (104064876544 B)
[2025-06-03 10:53:40] 2025-06-03 14:53:22,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:53:40] 2025-06-03 14:53:22,696 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:53:40] 2025-06-03 14:53:22,696 | INFO     | update_server=False
[2025-06-03 10:53:40] 2025-06-03 14:53:22,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:53:40] 2025-06-03 14:53:22,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:53:40] 2025-06-03 14:53:22,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:53:40] 2025-06-03 14:53:22,696 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 10:53:40] 2025-06-03 14:53:22,696 | INFO     | aborting loop
[2025-06-03 10:53:40] 2025-06-03 14:53:22,697 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:53:40] 2025-06-03 14:53:22,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:53:40] 2025-06-03 14:53:22,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:53:40] 2025-06-03 14:53:22,793 | INFO     | all job control threads have been joined
[2025-06-03 10:53:40] 2025-06-03 14:53:23,018 | INFO     | all data control threads have been joined
[2025-06-03 10:53:40] 2025-06-03 14:53:23,203 | INFO     | all payload control threads have been joined
[2025-06-03 10:53:40] 2025-06-03 14:53:23,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:53:40] 2025-06-03 14:53:23,701 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:23,702 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:23,702 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:23,798 | INFO     | [job] control thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:23,818 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:23,879 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:24,023 | INFO     | [data] control thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:24,208 | INFO     | [payload] control thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:24,354 | INFO     | [job] validate thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:24,377 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:24,455 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:24,526 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:24,557 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:25,380 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:26,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:53:40] 2025-06-03 14:53:30,179 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:33,068 | INFO     | job.realtimelogging is not enabled
[2025-06-03 10:53:40] 2025-06-03 14:53:34,073 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:53:40] 2025-06-03 14:53:35,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033220347712)>', '<ExcThread(monitor, started 140032635561728)>']
[2025-06-03 10:53:40] 2025-06-03 14:53:35,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:53:40] 2025-06-03 14:53:35,763 | INFO     | [monitor] control thread has ended
[2025-06-03 10:53:40] 2025-06-03 14:53:40,337 | INFO     | all workflow threads have been joined
[2025-06-03 10:53:40] 2025-06-03 14:53:40,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:53:40] 2025-06-03 14:53:40,338 | INFO     | traces error code: 0
[2025-06-03 10:53:40] 2025-06-03 14:53:40,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:53:40] 2025-06-03 14:53:40,396 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:53:40] 2025-06-03 14:53:40,399 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:53:40] 2025-06-03 14:53:40,400 [wrapper] pilotpid: 5606
[2025-06-03 10:53:40] 2025-06-03 14:53:40,402 [wrapper] Pilot exit status: 0
[2025-06-03 10:53:40] 2025-06-03 14:53:40,408 [wrapper] pandaids: 6668989097
[2025-06-03 10:53:40] 2025-06-03 14:53:40,461 [wrapper] cleanup supervisor_pilot 59036 5607
[2025-06-03 10:53:40] 2025-06-03 14:53:40,463 [wrapper] Test setup, not cleaning
[2025-06-03 10:53:40] 2025-06-03 14:53:40,465 [wrapper] apfmon messages muted
[2025-06-03 10:53:40] 2025-06-03 14:53:40,466 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:53:40] 2025-06-03 14:53:40,468 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:53:40]  *** Error codes and diagnostics ***
[2025-06-03 10:53:40]     "exeErrorCode": 0,
[2025-06-03 10:53:40]     "exeErrorDiag": "",
[2025-06-03 10:53:40]     "pilotErrorCode": 0,
[2025-06-03 10:53:40]     "pilotErrorDiag": "",
[2025-06-03 10:53:40]  *** Listing of results directory ***
[2025-06-03 10:53:40] total 413516
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas    495897 May 28 18:21 pilot3.tar.gz
[2025-06-03 10:53:40] -rwx------ 1 boincer umatlas     37140 May 28 18:41 runpilot2-wrapper.sh
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas      5111 May 28 18:41 queuedata.json
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas       100 Jun  3 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:53:40] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 09:31 run_atlas
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas       105 Jun  3 09:31 job.xml
[2025-06-03 10:53:40] -rw-r--r-- 2 boincer umatlas 221815045 Jun  3 09:31 EVNT.44871834._002060.pool.root.1
[2025-06-03 10:53:40] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 09:31 start_atlas.sh
[2025-06-03 10:53:40] drwxrwx--x 2 boincer umatlas      4096 Jun  3 09:31 shared
[2025-06-03 10:53:40] -rw-r--r-- 2 boincer umatlas    508875 Jun  3 09:31 input.tar.gz
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas         0 Jun  3 09:31 boinc_lockfile
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas      2558 Jun  3 09:31 pandaJob.out
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas    982724 Jun  3 09:32 agis_schedconf.cvmfs.json
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas   1603667 Jun  3 09:32 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:53:40] drwx------ 4 boincer umatlas      4096 Jun  3 09:32 pilot3
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas      6301 Jun  3 10:47 init_data.xml
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas        95 Jun  3 10:52 pilot_heartbeat.json
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas 196209714 Jun  3 10:52 HITS.44871837._091437.pool.root.1
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas       529 Jun  3 10:52 boinc_task_state.xml
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas      1043 Jun  3 10:53 memory_monitor_summary.json
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas    305747 Jun  3 10:53 log.44871837._091437.job.log.tgz.1
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas      7710 Jun  3 10:53 heartbeat.json
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 10:53 boinc_mmap_file
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas        27 Jun  3 10:53 wrapper_checkpoint.txt
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas      4549 Jun  3 10:53 pilotlog.txt
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas    483660 Jun  3 10:53 log.44871837._091437.job.log.1
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas       357 Jun  3 10:53 output.list
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas       620 Jun  3 10:53 runtime_log
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas    808960 Jun  3 10:53 result.tar.gz
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 10:53 runtime_log.err
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas       656 Jun  3 10:53 a3ULDmKeee7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgEdKDmR59ahm.diag
[2025-06-03 10:53:40] -rw-r--r-- 1 boincer umatlas     21169 Jun  3 10:53 stderr.txt
[2025-06-03 10:53:40] HITS file was successfully produced:
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas 196209714 Jun  3 10:52 shared/HITS.pool.root.1
[2025-06-03 10:53:40]  *** Contents of shared directory: ***
[2025-06-03 10:53:40] total 409548
[2025-06-03 10:53:40] -rw-r--r-- 2 boincer umatlas 221815045 Jun  3 09:31 ATLAS.root_0
[2025-06-03 10:53:40] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 09:31 start_atlas.sh
[2025-06-03 10:53:40] -rw-r--r-- 2 boincer umatlas    508875 Jun  3 09:31 input.tar.gz
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas 196209714 Jun  3 10:52 HITS.pool.root.1
[2025-06-03 10:53:40] -rw------- 1 boincer umatlas    808960 Jun  3 10:53 result.tar.gz
10:53:41 (1435): run_atlas exited; CPU time 36712.429834
10:53:41 (1435): called boinc_finish(0)

</stderr_txt>
]]>

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