Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:21:44 (7723): wrapper (7.7.26015): starting
09:21:44 (7723): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:21:44] Arguments: --nthreads 8
[2025-06-03 09:21:44] Threads: 8
[2025-06-03 09:21:44] Checking for CVMFS
[2025-06-03 09:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:21:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:21:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:21:44] 2.11.2.0 2913 34248 72308 146743 0 55 14310794 20275200 1 130560 0 10201303 99.974 5887985 7375 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 09:21:44] CVMFS is ok
[2025-06-03 09:21:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:21:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:21:44] Further information can be found at the LHC@home message board.
[2025-06-03 09:21:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:21:44] Checking for apptainer binary...
[2025-06-03 09:21:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:21:44] Running /usr/bin/apptainer --version
[2025-06-03 09:21:44] apptainer version 1.3.2-1.el7
[2025-06-03 09:21:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:21:46] c-115-3.aglt2.org
[2025-06-03 09:21:46] apptainer works
[2025-06-03 09:21:46] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:21:46] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:21:46] Starting ATLAS job with PandaID=6677578588
[2025-06-03 09:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:02:17]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:02:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 11:02:17]  is_altstaged=None
[2025-06-03 11:02:17]  is_tar=False
[2025-06-03 11:02:17]  lfn=log.45006595._029547.job.log.tgz.1
[2025-06-03 11:02:17]  mtime=0
[2025-06-03 11:02:17]  protocol_id=None
[2025-06-03 11:02:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 11:02:17]  replicas=None
[2025-06-03 11:02:17]  scope=mc23_13p6TeV
[2025-06-03 11:02:17]  status=None
[2025-06-03 11:02:17]  status_code=0
[2025-06-03 11:02:17]  storage_token=
[2025-06-03 11:02:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677578588/log.45006595._029547.job.log.tgz.1
[2025-06-03 11:02:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/0d/log.45006595._029547.job.log.tgz.1
[2025-06-03 11:02:17]  workdir=None
[2025-06-03 11:02:17] ]
[2025-06-03 11:02:17] 2025-06-03 15:01:49,972 | INFO     | transferring file log.45006595._029547.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677578588/log.45006595._029547.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 11:02:17] 2025-06-03 15:01:49,972 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677578588/log.45006595._029547.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._029547.job
[2025-06-03 11:02:17] 2025-06-03 15:01:49,996 | INFO     | adding to output.list: log.45006595._029547.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/0d/log.45006595._029547.job.log.tg
[2025-06-03 11:02:17] 2025-06-03 15:01:49,997 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 11:02:17] 2025-06-03 15:01:49,998 | INFO     | summary of transferred files:
[2025-06-03 11:02:17] 2025-06-03 15:01:49,998 | INFO     |  -- lfn=log.45006595._029547.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 11:02:17] 2025-06-03 15:01:49,998 | INFO     | stage-out finished correctly
[2025-06-03 11:02:17] 2025-06-03 15:01:53,035 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 11:02:17] 2025-06-03 15:01:53,118 | INFO     | job 6677578588 has state=finished
[2025-06-03 11:02:17] 2025-06-03 15:01:53,118 | INFO     | preparing for final server update for job 6677578588 in state='finished'
[2025-06-03 11:02:17] 2025-06-03 15:01:53,119 | INFO     | this job has now completed (state=finished)
[2025-06-03 11:02:17] 2025-06-03 15:01:53,119 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 11:02:17] 2025-06-03 15:01:53,119 | INFO     | log transfer has been attempted: DONE
[2025-06-03 11:02:17] 2025-06-03 15:01:53,119 | INFO     | job 6677578588 has finished - writing final server update
[2025-06-03 11:02:17] 2025-06-03 15:01:53,120 | INFO     | total number of processed events: 400 (read)
[2025-06-03 11:02:17] 2025-06-03 15:01:53,122 | INFO     | executing command: lscpu
[2025-06-03 11:02:17] 2025-06-03 15:01:53,149 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 11:02:17] 2025-06-03 15:01:55,185 | WARNING  | process 18903 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 11:02:17] 2025-06-03 15:01:55,186 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677578588/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:02:17] 2025-06-03 15:01:55,275 | INFO     | number of running child processes to parent process 18903: 1
[2025-06-03 11:02:17] 2025-06-03 15:01:55,275 | INFO     | maximum number of monitored processes: 6
[2025-06-03 11:02:17] 2025-06-03 15:01:57,778 | INFO     | monitor loop #444: job 0:6677578588 is in state 'finished'
[2025-06-03 11:02:17] 2025-06-03 15:01:57,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:02:17] 2025-06-03 15:01:58,818 | INFO     | PID=12209 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 11:02:17] 2025-06-03 15:01:58,933 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 11:02:17] 2025-06-03 15:01:58,934 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677578588/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:02:17] 2025-06-03 15:01:58,934 | INFO     | extracted standard info from prmon json
[2025-06-03 11:02:17] 2025-06-03 15:01:58,935 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:02:17] 2025-06-03 15:01:58,935 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:02:17] 2025-06-03 15:01:58,935 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:02:17] 2025-06-03 15:01:58,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:02:17] 2025-06-03 15:01:58,939 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:02:17] 2025-06-03 15:01:58,939 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 11:02:17] 2025-06-03 15:01:58,940 | INFO     | sum of deviations: -15152663032.000002
[2025-06-03 11:02:17] 2025-06-03 15:01:58,940 | INFO     | mean x: 1748960004.0
[2025-06-03 11:02:17] 2025-06-03 15:01:58,940 | INFO     | mean y: 2581082.8571428573
[2025-06-03 11:02:17] 2025-06-03 15:01:58,940 | INFO     | -- intersect: 113430167314.64651
[2025-06-03 11:02:17] 2025-06-03 15:01:58,941 | INFO     | intersect: 113430167314.64651
[2025-06-03 11:02:17] 2025-06-03 15:01:58,941 | INFO     | chi2: 0.1009955667241617
[2025-06-03 11:02:17] 2025-06-03 15:01:58,941 | INFO     | -- intersect: 113430167314.64651
[2025-06-03 11:02:17] 2025-06-03 15:01:58,941 | INFO     | current memory leak: -64.85 B/s (using 91 data points, chi2=0.10)
[2025-06-03 11:02:17] 2025-06-03 15:01:58,942 | INFO     | ..............................
[2025-06-03 11:02:17] 2025-06-03 15:01:58,942 | INFO     | . Timing measurements:
[2025-06-03 11:02:17] 2025-06-03 15:01:58,942 | INFO     | . get job = 0 s
[2025-06-03 11:02:17] 2025-06-03 15:01:58,943 | INFO     | . initial setup = 2 s
[2025-06-03 11:02:17] 2025-06-03 15:01:58,943 | INFO     | . payload setup = 11 s
[2025-06-03 11:02:17] 2025-06-03 15:01:58,943 | INFO     | . stage-in = 0 s
[2025-06-03 11:02:17] 2025-06-03 15:01:58,943 | INFO     | . payload execution = 5956 s
[2025-06-03 11:02:17] 2025-06-03 15:01:58,943 | INFO     | . stage-out = 0 s
[2025-06-03 11:02:17] 2025-06-03 15:01:58,943 | INFO     | . log creation = 0 s
[2025-06-03 11:02:17] 2025-06-03 15:01:58,944 | INFO     | ..............................
[2025-06-03 11:02:17] 2025-06-03 15:01:59,029 | INFO     | 
[2025-06-03 11:02:17] 2025-06-03 15:01:59,029 | INFO     | job summary report
[2025-06-03 11:02:17] 2025-06-03 15:01:59,039 | INFO     | --------------------------------------------------
[2025-06-03 11:02:17] 2025-06-03 15:01:59,040 | INFO     | PanDA job id: 6677578588
[2025-06-03 11:02:17] 2025-06-03 15:01:59,040 | INFO     | task id: 45006595
[2025-06-03 11:02:17] 2025-06-03 15:01:59,040 | INFO     | errors: (none)
[2025-06-03 11:02:17] 2025-06-03 15:01:59,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:02:17] 2025-06-03 15:01:59,040 | INFO     | pilot state: finished 
[2025-06-03 11:02:17] 2025-06-03 15:01:59,040 | INFO     | transexitcode: 0
[2025-06-03 11:02:17] 2025-06-03 15:01:59,041 | INFO     | exeerrorcode: 0
[2025-06-03 11:02:17] 2025-06-03 15:01:59,041 | INFO     | exeerrordiag: 
[2025-06-03 11:02:17] 2025-06-03 15:01:59,041 | INFO     | exitcode: 0
[2025-06-03 11:02:17] 2025-06-03 15:01:59,041 | INFO     | exitmsg: OK
[2025-06-03 11:02:17] 2025-06-03 15:01:59,041 | INFO     | cpuconsumptiontime: 44260 s
[2025-06-03 11:02:17] 2025-06-03 15:01:59,041 | INFO     | nevents: 400
[2025-06-03 11:02:17] 2025-06-03 15:01:59,042 | INFO     | neventsw: 0
[2025-06-03 11:02:17] 2025-06-03 15:01:59,042 | INFO     | pid: 18903
[2025-06-03 11:02:17] 2025-06-03 15:01:59,042 | INFO     | pgrp: 18903
[2025-06-03 11:02:17] 2025-06-03 15:01:59,042 | INFO     | corecount: 8
[2025-06-03 11:02:17] 2025-06-03 15:01:59,042 | INFO     | event service: False
[2025-06-03 11:02:17] 2025-06-03 15:01:59,042 | INFO     | sizes: {0: 2404356, 1: 2405212, 7: 2405418, 12: 2405446, 5971: 2432018, 5972: 2440959, 5975: 2441143, 5981: 2441313}
[2025-06-03 11:02:17] 2025-06-03 15:01:59,043 | INFO     | --------------------------------------------------
[2025-06-03 11:02:17] 2025-06-03 15:01:59,043 | INFO     | 
[2025-06-03 11:02:17] 2025-06-03 15:01:59,043 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 11:02:17] 2025-06-03 15:01:59,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,070 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,072 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:02:17] 2025-06-03 15:01:59,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:02:17] 2025-06-03 15:01:59,072 | INFO     | job 6677578588 has completed (purged errors)
[2025-06-03 11:02:17] 2025-06-03 15:01:59,073 | INFO     | overall cleanup function is called
[2025-06-03 11:02:17] 2025-06-03 15:02:00,076 | INFO     | --- collectZombieJob: --- 10, [18903]
[2025-06-03 11:02:17] 2025-06-03 15:02:00,076 | INFO     | zombie collector waiting for pid 18903
[2025-06-03 11:02:17] 2025-06-03 15:02:00,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:02:17] 2025-06-03 15:02:00,076 | INFO     | collected zombie processes
[2025-06-03 11:02:17] 2025-06-03 15:02:00,076 | INFO     | will attempt to kill all subprocesses of pid=18903
[2025-06-03 11:02:17] 2025-06-03 15:02:00,163 | INFO     | process IDs to be killed: [18903] (in reverse order)
[2025-06-03 11:02:17] 2025-06-03 15:02:00,219 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:02:17] 2025-06-03 15:02:00,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:02:17] 2025-06-03 15:02:00,224 | INFO     | did not find any defunct processes belonging to 18903
[2025-06-03 11:02:17] 2025-06-03 15:02:00,226 | INFO     | did not find any defunct processes belonging to 18903
[2025-06-03 11:02:17] 2025-06-03 15:02:00,226 | INFO     | ready for new job
[2025-06-03 11:02:17] 2025-06-03 15:02:00,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:02:17] 2025-06-03 15:02:00,228 | INFO     | **************************************
[2025-06-03 11:02:17] 2025-06-03 15:02:00,228 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:02:17] 2025-06-03 15:02:00,228 | INFO     | **************************************
[2025-06-03 11:02:17] 2025-06-03 15:02:00,228 | INFO     | 
[2025-06-03 11:02:17] 2025-06-03 15:02:00,229 | INFO     | architecture information:
[2025-06-03 11:02:17] 2025-06-03 15:02:00,229 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:02:17] 2025-06-03 15:02:00,247 | INFO     | cat /etc/os-release:
[2025-06-03 11:02:17] NAME="CentOS Linux"
[2025-06-03 11:02:17] VERSION="7 (Core)"
[2025-06-03 11:02:17] ID="centos"
[2025-06-03 11:02:17] ID_LIKE="rhel fedora"
[2025-06-03 11:02:17] VERSION_ID="7"
[2025-06-03 11:02:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:02:17] ANSI_COLOR="0;31"
[2025-06-03 11:02:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:02:17] HOME_URL="https://www.centos.org/"
[2025-06-03 11:02:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:02:17] 
[2025-06-03 11:02:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:02:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:02:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:02:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:02:17] 
[2025-06-03 11:02:17] 2025-06-03 15:02:00,248 | INFO     | **************************************
[2025-06-03 11:02:17] 2025-06-03 15:02:00,751 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 11:02:17] 2025-06-03 15:02:00,770 | INFO     | sufficient remaining disk space (18648924160 B)
[2025-06-03 11:02:17] 2025-06-03 15:02:00,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:02:17] 2025-06-03 15:02:00,771 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:02:17] 2025-06-03 15:02:00,771 | INFO     | update_server=False
[2025-06-03 11:02:17] 2025-06-03 15:02:00,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:02:17] 2025-06-03 15:02:00,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:02:17] 2025-06-03 15:02:00,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:02:17] 2025-06-03 15:02:00,821 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:02:17] 2025-06-03 15:02:00,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:02:17] 2025-06-03 15:02:00,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:02:17] 2025-06-03 15:02:01,018 | INFO     | all job control threads have been joined
[2025-06-03 11:02:17] 2025-06-03 15:02:01,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:02:17] 2025-06-03 15:02:01,286 | INFO     | aborting loop
[2025-06-03 11:02:17] 2025-06-03 15:02:01,588 | INFO     | all data control threads have been joined
[2025-06-03 11:02:17] 2025-06-03 15:02:01,777 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:01,778 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,023 | INFO     | [job] control thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,099 | INFO     | all payload control threads have been joined
[2025-06-03 11:02:17] 2025-06-03 15:02:02,138 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,189 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,203 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,280 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,291 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,434 | INFO     | [job] validate thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,590 | INFO     | [data] control thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,630 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:02,778 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:03,021 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:03,104 | INFO     | [payload] control thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:03,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:02:17] 2025-06-03 15:02:07,633 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:11,142 | INFO     | job.realtimelogging is not enabled
[2025-06-03 11:02:17] 2025-06-03 15:02:12,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:02:17] 2025-06-03 15:02:12,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392497211200)>', '<ExcThread(monitor, started 140391542159104)>']
[2025-06-03 11:02:17] 2025-06-03 15:02:12,882 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:02:17] 2025-06-03 15:02:12,882 | INFO     | [monitor] control thread has ended
[2025-06-03 11:02:17] 2025-06-03 15:02:17,198 | INFO     | all workflow threads have been joined
[2025-06-03 11:02:17] 2025-06-03 15:02:17,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:02:17] 2025-06-03 15:02:17,199 | INFO     | traces error code: 0
[2025-06-03 11:02:17] 2025-06-03 15:02:17,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:02:17] 2025-06-03 15:02:17,298 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:02:17] 2025-06-03 15:02:17,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:02:17] 2025-06-03 15:02:17,307 [wrapper] pilotpid: 12209
[2025-06-03 11:02:17] 2025-06-03 15:02:17,311 [wrapper] Pilot exit status: 0
[2025-06-03 11:02:17] 2025-06-03 15:02:17,328 [wrapper] pandaids: 6677578588
[2025-06-03 11:02:17] 2025-06-03 15:02:17,373 [wrapper] cleanup supervisor_pilot  9449 12210
[2025-06-03 11:02:17] 2025-06-03 15:02:17,378 [wrapper] Test setup, not cleaning
[2025-06-03 11:02:17] 2025-06-03 15:02:17,383 [wrapper] apfmon messages muted
[2025-06-03 11:02:17] 2025-06-03 15:02:17,388 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:02:17] 2025-06-03 15:02:17,392 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:02:17]  *** Error codes and diagnostics ***
[2025-06-03 11:02:17]     "exeErrorCode": 0,
[2025-06-03 11:02:17]     "exeErrorDiag": "",
[2025-06-03 11:02:17]     "pilotErrorCode": 0,
[2025-06-03 11:02:17]     "pilotErrorDiag": "",
[2025-06-03 11:02:17]  *** Listing of results directory ***
[2025-06-03 11:02:17] total 384360
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 06:43 pilot3.tar.gz
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 06:46 queuedata.json
[2025-06-03 11:02:17] -rwx------ 1 boincer umatlas     37140 Jun  3 06:47 runpilot2-wrapper.sh
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas       100 Jun  3 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:02:17] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 09:21 run_atlas
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas       105 Jun  3 09:21 job.xml
[2025-06-03 11:02:17] -rw-r--r-- 2 boincer umatlas 214612025 Jun  3 09:21 EVNT.45006593._001181.pool.root.1
[2025-06-03 11:02:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 09:21 start_atlas.sh
[2025-06-03 11:02:17] drwxrwx--x 2 boincer umatlas      4096 Jun  3 09:21 shared
[2025-06-03 11:02:17] -rw-r--r-- 2 boincer umatlas    508881 Jun  3 09:21 input.tar.gz
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas         0 Jun  3 09:21 boinc_lockfile
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 09:21 pandaJob.out
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas    982724 Jun  3 09:21 agis_schedconf.cvmfs.json
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas   1603667 Jun  3 09:21 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:02:17] drwx------ 4 boincer umatlas      4096 Jun  3 09:22 pilot3
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas      5824 Jun  3 10:54 init_data.xml
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas        95 Jun  3 11:01 pilot_heartbeat.json
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas 173362320 Jun  3 11:01 HITS.45006595._029547.pool.root.1
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas       529 Jun  3 11:01 boinc_task_state.xml
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas      1047 Jun  3 11:01 memory_monitor_summary.json
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas    330401 Jun  3 11:01 log.45006595._029547.job.log.tgz.1
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas      7748 Jun  3 11:01 heartbeat.json
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas        27 Jun  3 11:02 wrapper_checkpoint.txt
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 11:02 boinc_mmap_file
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas      4425 Jun  3 11:02 pilotlog.txt
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas    557090 Jun  3 11:02 log.45006595._029547.job.log.1
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas       357 Jun  3 11:02 output.list
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas       620 Jun  3 11:02 runtime_log
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas    911360 Jun  3 11:02 result.tar.gz
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas      8654 Jun  3 11:02 runtime_log.err
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas       657 Jun  3 11:02 4z0KDmZMeg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdZjKDmcSp3rn.diag
[2025-06-03 11:02:17] -rw-r--r-- 1 boincer umatlas     21420 Jun  3 11:02 stderr.txt
[2025-06-03 11:02:17] HITS file was successfully produced:
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas 173362320 Jun  3 11:01 shared/HITS.pool.root.1
[2025-06-03 11:02:17]  *** Contents of shared directory: ***
[2025-06-03 11:02:17] total 380296
[2025-06-03 11:02:17] -rw-r--r-- 2 boincer umatlas 214612025 Jun  3 09:21 ATLAS.root_0
[2025-06-03 11:02:17] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 09:21 start_atlas.sh
[2025-06-03 11:02:17] -rw-r--r-- 2 boincer umatlas    508881 Jun  3 09:21 input.tar.gz
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas 173362320 Jun  3 11:01 HITS.pool.root.1
[2025-06-03 11:02:17] -rw------- 1 boincer umatlas    911360 Jun  3 11:02 result.tar.gz
11:02:19 (7723): run_atlas exited; CPU time 44209.409919
11:02:19 (7723): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN