Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:20:25 (1129147): wrapper (7.7.26015): starting
09:20:25 (1129147): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:20:25] Arguments: --nthreads 8
[2025-06-03 09:20:25] Threads: 8
[2025-06-03 09:20:25] Checking for CVMFS
[2025-06-03 09:20:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:20:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:20:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:20:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:20:25] 2.12.6.0 3581464 138134 230316 146743 1 131 25612996 32935936 3601 130560 0 356739480 99.602 381277555 28098 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 09:20:25] CVMFS is ok
[2025-06-03 09:20:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:20:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:20:25] Further information can be found at the LHC@home message board.
[2025-06-03 09:20:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:20:25] Checking for apptainer binary...
[2025-06-03 09:20:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:20:25] Running /usr/bin/apptainer --version
[2025-06-03 09:20:25] apptainer version 1.4.1-1.el9
[2025-06-03 09:20:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:20:25] c-6-6.aglt2.org
[2025-06-03 09:20:25] apptainer works
[2025-06-03 09:20:25] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:20:25] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:20:25] Starting ATLAS job with PandaID=6665756503
[2025-06-03 09:20:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:29:55]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:29:55] 2025-06-03 15:29:39,665 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:29:55] 2025-06-03 15:29:39,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:29:55] 2025-06-03 15:29:39,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:29:55] 2025-06-03 15:29:39,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:29:55] 2025-06-03 15:29:39,669 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:29:55] 2025-06-03 15:29:39,669 | INFO     | sum of square deviations: 635130048.0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,670 | INFO     | sum of deviations: 20049700088.000015
[2025-06-03 11:29:55] 2025-06-03 15:29:39,670 | INFO     | mean x: 1748960702.0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,670 | INFO     | mean y: 2101479.1417322834
[2025-06-03 11:29:55] 2025-06-03 15:29:39,671 | INFO     | -- intersect: -55208855160.71475
[2025-06-03 11:29:55] 2025-06-03 15:29:39,671 | INFO     | intersect: -55208855160.71475
[2025-06-03 11:29:55] 2025-06-03 15:29:39,671 | INFO     | chi2: 4.114589678812357
[2025-06-03 11:29:55] 2025-06-03 15:29:39,671 | INFO     | sum of square deviations: 563026370.5
[2025-06-03 11:29:55] 2025-06-03 15:29:39,672 | INFO     | sum of deviations: 27407953340.500008
[2025-06-03 11:29:55] 2025-06-03 15:29:39,672 | INFO     | mean x: 1748960549.5
[2025-06-03 11:29:55] 2025-06-03 15:29:39,672 | INFO     | mean y: 2116617.2377049183
[2025-06-03 11:29:55] 2025-06-03 15:29:39,672 | INFO     | -- intersect: -85136753685.58989
[2025-06-03 11:29:55] 2025-06-03 15:29:39,673 | INFO     | intersect: -85136753685.58989
[2025-06-03 11:29:55] 2025-06-03 15:29:39,673 | INFO     | chi2: 3.4492399055054217
[2025-06-03 11:29:55] 2025-06-03 15:29:39,673 | INFO     | current chi2=3.4492399055054217 (change=16.17050119804372 %)
[2025-06-03 11:29:55] 2025-06-03 15:29:39,673 | INFO     | right removable region: 121
[2025-06-03 11:29:55] 2025-06-03 15:29:39,673 | INFO     | sum of square deviations: 563026370.5
[2025-06-03 11:29:55] 2025-06-03 15:29:39,674 | INFO     | sum of deviations: -4644070727.000015
[2025-06-03 11:29:55] 2025-06-03 15:29:39,674 | INFO     | mean x: 1748960854.5
[2025-06-03 11:29:55] 2025-06-03 15:29:39,674 | INFO     | mean y: 2153437.7377049183
[2025-06-03 11:29:55] 2025-06-03 15:29:39,675 | INFO     | -- intersect: 14428294614.463251
[2025-06-03 11:29:55] 2025-06-03 15:29:39,675 | INFO     | intersect: 14428294614.463251
[2025-06-03 11:29:55] 2025-06-03 15:29:39,675 | INFO     | chi2: 1.8236803997381332
[2025-06-03 11:29:55] 2025-06-03 15:29:39,675 | INFO     | current chi2=1.8236803997381332 (change=55.67770927125536 %)
[2025-06-03 11:29:55] 2025-06-03 15:29:39,675 | INFO     | sum of square deviations: 496597218.0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,676 | INFO     | sum of deviations: -20359305161.0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,676 | INFO     | mean x: 1748961007.0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,676 | INFO     | mean y: 2189258.965811966
[2025-06-03 11:29:55] 2025-06-03 15:29:39,676 | INFO     | -- intersect: 71705431978.70825
[2025-06-03 11:29:55] 2025-06-03 15:29:39,677 | INFO     | intersect: 71705431978.70825
[2025-06-03 11:29:55] 2025-06-03 15:29:39,677 | INFO     | chi2: 0.8168134061013914
[2025-06-03 11:29:55] 2025-06-03 15:29:39,677 | INFO     | current chi2=0.8168134061013914 (change=55.210715308522275 %)
[2025-06-03 11:29:55] 2025-06-03 15:29:39,677 | INFO     | sum of square deviations: 435610028.0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,678 | INFO     | sum of deviations: -20613625598.5
[2025-06-03 11:29:55] 2025-06-03 15:29:39,678 | INFO     | mean x: 1748961159.5
[2025-06-03 11:29:55] 2025-06-03 15:29:39,678 | INFO     | mean y: 2189747.4553571427
[2025-06-03 11:29:55] 2025-06-03 15:29:39,678 | INFO     | -- intersect: 82765276478.44182
[2025-06-03 11:29:55] 2025-06-03 15:29:39,678 | INFO     | intersect: 82765276478.44182
[2025-06-03 11:29:55] 2025-06-03 15:29:39,679 | INFO     | chi2: 0.7776961980748428
[2025-06-03 11:29:55] 2025-06-03 15:29:39,679 | INFO     | current chi2=0.7776961980748428 (change=4.789001715000374 %)
[2025-06-03 11:29:55] 2025-06-03 15:29:39,679 | INFO     | left removable region: 30
[2025-06-03 11:29:55] 2025-06-03 15:29:39,679 | INFO     | sum of square deviations: 233641590.0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,680 | INFO     | sum of deviations: -6943104362.999999
[2025-06-03 11:29:55] 2025-06-03 15:29:39,680 | INFO     | mean x: 1748961434.0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,680 | INFO     | mean y: 2191685.2527472526
[2025-06-03 11:29:55] 2025-06-03 15:29:39,680 | INFO     | -- intersect: 51975908193.191826
[2025-06-03 11:29:55] 2025-06-03 15:29:39,680 | INFO     | intersect: 51975908193.191826
[2025-06-03 11:29:55] 2025-06-03 15:29:39,680 | INFO     | chi2: 0.08170257262635575
[2025-06-03 11:29:55] 2025-06-03 15:29:39,681 | INFO     | -- intersect: 51975908193.191826
[2025-06-03 11:29:55] 2025-06-03 15:29:39,681 | INFO     | current memory leak: -29.72 B/s (using 91 data points, chi2=0.08)
[2025-06-03 11:29:55] 2025-06-03 15:29:39,681 | INFO     | ..............................
[2025-06-03 11:29:55] 2025-06-03 15:29:39,681 | INFO     | . Timing measurements:
[2025-06-03 11:29:55] 2025-06-03 15:29:39,681 | INFO     | . get job = 0 s
[2025-06-03 11:29:55] 2025-06-03 15:29:39,682 | INFO     | . initial setup = 2 s
[2025-06-03 11:29:55] 2025-06-03 15:29:39,682 | INFO     | . payload setup = 5 s
[2025-06-03 11:29:55] 2025-06-03 15:29:39,682 | INFO     | . stage-in = 0 s
[2025-06-03 11:29:55] 2025-06-03 15:29:39,682 | INFO     | . payload execution = 7712 s
[2025-06-03 11:29:55] 2025-06-03 15:29:39,682 | INFO     | . stage-out = 0 s
[2025-06-03 11:29:55] 2025-06-03 15:29:39,682 | INFO     | . log creation = 0 s
[2025-06-03 11:29:55] 2025-06-03 15:29:39,682 | INFO     | ..............................
[2025-06-03 11:29:55] 2025-06-03 15:29:39,937 | INFO     | 
[2025-06-03 11:29:55] 2025-06-03 15:29:39,937 | INFO     | job summary report
[2025-06-03 11:29:55] 2025-06-03 15:29:39,937 | INFO     | --------------------------------------------------
[2025-06-03 11:29:55] 2025-06-03 15:29:39,937 | INFO     | PanDA job id: 6665756503
[2025-06-03 11:29:55] 2025-06-03 15:29:39,937 | INFO     | task id: 44871837
[2025-06-03 11:29:55] 2025-06-03 15:29:39,937 | INFO     | errors: (none)
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | pilot state: finished 
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | transexitcode: 0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | exeerrorcode: 0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | exeerrordiag: 
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | exitcode: 0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | exitmsg: OK
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | cpuconsumptiontime: 55510 s
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | nevents: 400
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | neventsw: 0
[2025-06-03 11:29:55] 2025-06-03 15:29:39,938 | INFO     | pid: 1139723
[2025-06-03 11:29:55] 2025-06-03 15:29:39,939 | INFO     | pgrp: 1139723
[2025-06-03 11:29:55] 2025-06-03 15:29:39,939 | INFO     | corecount: 8
[2025-06-03 11:29:55] 2025-06-03 15:29:39,939 | INFO     | event service: False
[2025-06-03 11:29:55] 2025-06-03 15:29:39,939 | INFO     | sizes: {0: 2405120, 1: 2405262, 4: 2405468, 11: 2405496, 7722: 2433004, 7724: 2441945, 7725: 2442129, 7731: 2442299}
[2025-06-03 11:29:55] 2025-06-03 15:29:39,939 | INFO     | --------------------------------------------------
[2025-06-03 11:29:55] 2025-06-03 15:29:39,939 | INFO     | 
[2025-06-03 11:29:55] 2025-06-03 15:29:39,939 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-06-03 11:29:55] 2025-06-03 15:29:39,955 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,956 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,956 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,956 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,957 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:29:55] 2025-06-03 15:29:39,958 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,958 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:29:55] 2025-06-03 15:29:39,958 | INFO     | job 6665756503 has completed (purged errors)
[2025-06-03 11:29:55] 2025-06-03 15:29:39,958 | INFO     | overall cleanup function is called
[2025-06-03 11:29:55] 2025-06-03 15:29:40,965 | INFO     | --- collectZombieJob: --- 10, [1139723]
[2025-06-03 11:29:55] 2025-06-03 15:29:40,965 | INFO     | zombie collector waiting for pid 1139723
[2025-06-03 11:29:55] 2025-06-03 15:29:40,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:29:55] 2025-06-03 15:29:40,966 | INFO     | collected zombie processes
[2025-06-03 11:29:55] 2025-06-03 15:29:40,966 | INFO     | will attempt to kill all subprocesses of pid=1139723
[2025-06-03 11:29:55] 2025-06-03 15:29:41,496 | INFO     | process IDs to be killed: [1139723] (in reverse order)
[2025-06-03 11:29:55] 2025-06-03 15:29:41,566 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:29:55] 2025-06-03 15:29:41,567 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:29:55] 2025-06-03 15:29:41,584 | INFO     | PID=1132775 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 11:29:55] 2025-06-03 15:29:41,584 | INFO     | .. there are 5 such processes running
[2025-06-03 11:29:55] 2025-06-03 15:29:41,587 | INFO     | did not find any defunct processes belonging to 1139723
[2025-06-03 11:29:55] 2025-06-03 15:29:41,594 | INFO     | did not find any defunct processes belonging to 1139723
[2025-06-03 11:29:55] 2025-06-03 15:29:41,595 | INFO     | ready for new job
[2025-06-03 11:29:55] 2025-06-03 15:29:41,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:29:55] 2025-06-03 15:29:41,597 | INFO     | **************************************
[2025-06-03 11:29:55] 2025-06-03 15:29:41,597 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:29:55] 2025-06-03 15:29:41,597 | INFO     | **************************************
[2025-06-03 11:29:55] 2025-06-03 15:29:41,597 | INFO     | 
[2025-06-03 11:29:55] 2025-06-03 15:29:41,611 | INFO     | architecture information:
[2025-06-03 11:29:55] 2025-06-03 15:29:41,611 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:29:55] 2025-06-03 15:29:41,624 | INFO     | cat /etc/os-release:
[2025-06-03 11:29:55] NAME="CentOS Linux"
[2025-06-03 11:29:55] VERSION="7 (Core)"
[2025-06-03 11:29:55] ID="centos"
[2025-06-03 11:29:55] ID_LIKE="rhel fedora"
[2025-06-03 11:29:55] VERSION_ID="7"
[2025-06-03 11:29:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:29:55] ANSI_COLOR="0;31"
[2025-06-03 11:29:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:29:55] HOME_URL="https://www.centos.org/"
[2025-06-03 11:29:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:29:55] 
[2025-06-03 11:29:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:29:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:29:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:29:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:29:55] 
[2025-06-03 11:29:55] 2025-06-03 15:29:41,624 | INFO     | **************************************
[2025-06-03 11:29:55] 2025-06-03 15:29:42,127 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-06-03 11:29:55] 2025-06-03 15:29:42,140 | INFO     | sufficient remaining disk space (74450993152 B)
[2025-06-03 11:29:55] 2025-06-03 15:29:42,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:29:55] 2025-06-03 15:29:42,141 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:29:55] 2025-06-03 15:29:42,141 | INFO     | update_server=False
[2025-06-03 11:29:55] 2025-06-03 15:29:42,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:29:55] 2025-06-03 15:29:42,141 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 11:29:55] 2025-06-03 15:29:42,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:29:55] 2025-06-03 15:29:42,142 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:29:55] 2025-06-03 15:29:42,142 | INFO     | aborting loop
[2025-06-03 11:29:55] 2025-06-03 15:29:42,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:29:55] 2025-06-03 15:29:42,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:29:55] 2025-06-03 15:29:42,156 | INFO     | all data control threads have been joined
[2025-06-03 11:29:55] 2025-06-03 15:29:43,146 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:43,147 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:43,161 | INFO     | [data] control thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:43,175 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:43,309 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:43,327 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:43,358 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:29:55] 2025-06-03 15:29:43,542 | INFO     | all payload control threads have been joined
[2025-06-03 11:29:55] 2025-06-03 15:29:43,760 | INFO     | all job control threads have been joined
[2025-06-03 11:29:55] 2025-06-03 15:29:43,765 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:43,999 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:44,175 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:44,244 | INFO     | [job] validate thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:44,309 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:29:55] 2025-06-03 15:29:44,489 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:44,548 | INFO     | [payload] control thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:44,765 | INFO     | [job] control thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:44,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:29:55] 2025-06-03 15:29:45,363 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:45,811 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:48,315 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:29:55] 2025-06-03 15:29:50,090 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971019454272)>', '<ExcThread(monitor, started 139970534684416)>']
[2025-06-03 11:29:55] 2025-06-03 15:29:50,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:29:55] 2025-06-03 15:29:50,182 | INFO     | [monitor] control thread has ended
[2025-06-03 11:29:55] 2025-06-03 15:29:55,116 | INFO     | all workflow threads have been joined
[2025-06-03 11:29:55] 2025-06-03 15:29:55,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:29:55] 2025-06-03 15:29:55,117 | INFO     | traces error code: 0
[2025-06-03 11:29:55] 2025-06-03 15:29:55,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:29:55] 2025-06-03 15:29:55,228 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:29:55] 2025-06-03 15:29:55,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:29:55] 2025-06-03 15:29:55,233 [wrapper] pilotpid: 1132775
[2025-06-03 11:29:55] 2025-06-03 15:29:55,235 [wrapper] Pilot exit status: 0
[2025-06-03 11:29:55] 2025-06-03 15:29:55,245 [wrapper] pandaids: 6665756503
[2025-06-03 11:29:55] 2025-06-03 15:29:55,294 [wrapper] cleanup supervisor_pilot 1404598 1132776
[2025-06-03 11:29:55] 2025-06-03 15:29:55,297 [wrapper] Test setup, not cleaning
[2025-06-03 11:29:55] 2025-06-03 15:29:55,300 [wrapper] apfmon messages muted
[2025-06-03 11:29:55] 2025-06-03 15:29:55,302 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:29:55] 2025-06-03 15:29:55,305 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:29:55]  *** Error codes and diagnostics ***
[2025-06-03 11:29:55]     "exeErrorCode": 0,
[2025-06-03 11:29:55]     "exeErrorDiag": "",
[2025-06-03 11:29:55]     "pilotErrorCode": 0,
[2025-06-03 11:29:55]     "pilotErrorDiag": "",
[2025-06-03 11:29:55]  *** Listing of results directory ***
[2025-06-03 11:29:55] total 430128
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas    495897 May 26 01:50 pilot3.tar.gz
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas      5111 May 26 01:59 queuedata.json
[2025-06-03 11:29:55] -rwx------. 1 boincer umatlas     37140 May 26 02:00 runpilot2-wrapper.sh
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas       100 Jun  3 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:29:55] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 09:20 run_atlas
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas       105 Jun  3 09:20 job.xml
[2025-06-03 11:29:55] -rw-r--r--. 2 boincer umatlas 226366498 Jun  3 09:20 EVNT.44871834._001854.pool.root.1
[2025-06-03 11:29:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:20 start_atlas.sh
[2025-06-03 11:29:55] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 09:20 shared
[2025-06-03 11:29:55] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 09:20 input.tar.gz
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas         0 Jun  3 09:20 boinc_lockfile
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas      2559 Jun  3 09:20 pandaJob.out
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas    982724 Jun  3 09:20 agis_schedconf.cvmfs.json
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas   1603667 Jun  3 09:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:29:55] drwx------. 4 boincer umatlas      4096 Jun  3 09:20 pilot3
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas      6674 Jun  3 11:27 init_data.xml
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas       529 Jun  3 11:28 boinc_task_state.xml
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas 208100005 Jun  3 11:28 HITS.44871837._046473.pool.root.1
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas        95 Jun  3 11:29 pilot_heartbeat.json
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas      1033 Jun  3 11:29 memory_monitor_summary.json
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas    343906 Jun  3 11:29 log.44871837._046473.job.log.tgz.1
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas      7710 Jun  3 11:29 heartbeat.json
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas        27 Jun  3 11:29 wrapper_checkpoint.txt
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 11:29 boinc_mmap_file
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas      4476 Jun  3 11:29 pilotlog.txt
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas    735807 Jun  3 11:29 log.44871837._046473.job.log.1
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas       357 Jun  3 11:29 output.list
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas       620 Jun  3 11:29 runtime_log
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas   1095680 Jun  3 11:29 result.tar.gz
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas       651 Jun  3 11:29 uQQLDmv3fd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm53VKDmX9EXbm.diag
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas      8644 Jun  3 11:29 runtime_log.err
[2025-06-03 11:29:55] -rw-r--r--. 1 boincer umatlas     20922 Jun  3 11:29 stderr.txt
[2025-06-03 11:29:55] HITS file was successfully produced:
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas 208100005 Jun  3 11:28 shared/HITS.pool.root.1
[2025-06-03 11:29:55]  *** Contents of shared directory: ***
[2025-06-03 11:29:55] total 425880
[2025-06-03 11:29:55] -rw-r--r--. 2 boincer umatlas 226366498 Jun  3 09:20 ATLAS.root_0
[2025-06-03 11:29:55] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:20 start_atlas.sh
[2025-06-03 11:29:55] -rw-r--r--. 2 boincer umatlas    508881 Jun  3 09:20 input.tar.gz
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas 208100005 Jun  3 11:28 HITS.pool.root.1
[2025-06-03 11:29:55] -rw-------. 1 boincer umatlas   1095680 Jun  3 11:29 result.tar.gz
11:29:56 (1129147): run_atlas exited; CPU time 55718.457975
11:29:56 (1129147): called boinc_finish(0)

</stderr_txt>
]]>

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