Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:32:18 (718307): wrapper (7.7.26015): starting
18:32:18 (718307): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 18:32:18] Arguments: --nthreads 3
[2025-06-04 18:32:18] Threads: 3
[2025-06-04 18:32:18] Checking for CVMFS
[2025-06-04 18:32:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:32:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:32:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:32:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:32:55] 2.11.5.0 718525 0 28884 146775 3 1 44492491 52428800 0 130560 0 0 100.000 2 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-04 18:32:55] CVMFS is ok
[2025-06-04 18:32:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:32:55] Checking for apptainer binary...
[2025-06-04 18:32:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:32:55] Running /usr/bin/apptainer --version
[2025-06-04 18:32:55] apptainer version 1.3.5-1.el9
[2025-06-04 18:32:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:32:55] testio004
[2025-06-04 18:32:55] apptainer works
[2025-06-04 18:32:55] Set ATHENA_PROC_NUMBER=3
[2025-06-04 18:32:55] Set ATHENA_CORE_NUMBER=3
[2025-06-04 18:32:55] Starting ATLAS job with PandaID=6677550638
[2025-06-04 18:32:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:20:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:20:28] 2025-06-04 11:20:08,169 | INFO     | extracted standard info from prmon json
[2025-06-04 20:20:28] 2025-06-04 11:20:08,169 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 20:20:28] 2025-06-04 11:20:08,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:20:28] 2025-06-04 11:20:08,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:20:28] 2025-06-04 11:20:08,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:20:28] 2025-06-04 11:20:08,170 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:20:28] 2025-06-04 11:20:08,170 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,170 | INFO     | sum of deviations: 13061217154.0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,170 | INFO     | mean x: 1749032795.0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,170 | INFO     | mean y: 2347783.1844660193
[2025-06-04 20:20:28] 2025-06-04 11:20:08,170 | INFO     | -- intersect: -67424435758.28808
[2025-06-04 20:20:28] 2025-06-04 11:20:08,170 | INFO     | intersect: -67424435758.28808
[2025-06-04 20:20:28] 2025-06-04 11:20:08,170 | INFO     | chi2: 3.7246595970920704
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | sum of deviations: 13017675689.5
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | mean x: 1749032642.5
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | mean y: 2347671.724489796
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | -- intersect: -78020165296.01085
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | intersect: -78020165296.01085
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | chi2: 3.7321937396053158
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | current chi2=3.7321937396053158 (change=-0.2022773441934785 %)
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | right removable region: 97
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | sum of deviations: -8260642448.000006
[2025-06-04 20:20:28] 2025-06-04 11:20:08,171 | INFO     | mean x: 1749032947.5
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | mean y: 2416516.326530612
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | -- intersect: 49513267015.76268
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | intersect: 49513267015.76268
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | chi2: 1.3687636156867984
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | current chi2=1.3687636156867984 (change=63.251309817535414 %)
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | sum of square deviations: 249388862.0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | sum of deviations: -22824956393.000004
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | mean x: 1749033100.0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | mean y: 2468885.7634408604
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | -- intersect: 160080204183.3952
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | intersect: 160080204183.3952
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | chi2: 0.24543189974202245
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | current chi2=0.24543189974202245 (change=82.06908067037762 %)
[2025-06-04 20:20:28] 2025-06-04 11:20:08,172 | INFO     | sum of square deviations: 211285822.0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | sum of deviations: -21130365596.0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | mean x: 1749033252.5
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | mean y: 2461814.25
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | -- intersect: 174920550094.14404
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | intersect: 174920550094.14404
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | chi2: 0.20043591660235394
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | current chi2=0.20043591660235394 (change=18.33338827877083 %)
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | left removable region: 30
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | sum of square deviations: 93240818.0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | sum of deviations: -9076932126.000002
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | mean x: 1749033527.0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | mean y: 2409121.432835821
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | -- intersect: 170269669225.02173
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | intersect: 170269669225.02173
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | chi2: 0.16278312344795234
[2025-06-04 20:20:28] 2025-06-04 11:20:08,173 | INFO     | -- intersect: 170269669225.02173
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | current memory leak: -97.35 B/s (using 67 data points, chi2=0.16)
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | ..............................
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | . Timing measurements:
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | . get job = 0 s
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | . initial setup = 9 s
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | . payload setup = 5 s
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | . stage-in = 0 s
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | . payload execution = 6243 s
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | . stage-out = 0 s
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | . log creation = 0 s
[2025-06-04 20:20:28] 2025-06-04 11:20:08,174 | INFO     | ..............................
[2025-06-04 20:20:28] 2025-06-04 11:20:08,212 | INFO     | 
[2025-06-04 20:20:28] 2025-06-04 11:20:08,212 | INFO     | job summary report
[2025-06-04 20:20:28] 2025-06-04 11:20:08,212 | INFO     | --------------------------------------------------
[2025-06-04 20:20:28] 2025-06-04 11:20:08,212 | INFO     | PanDA job id: 6677550638
[2025-06-04 20:20:28] 2025-06-04 11:20:08,212 | INFO     | task id: 45006595
[2025-06-04 20:20:28] 2025-06-04 11:20:08,212 | INFO     | errors: (none)
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | pilot state: finished 
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | transexitcode: 0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | exeerrorcode: 0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | exeerrordiag: 
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | exitcode: 0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | exitmsg: OK
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | cpuconsumptiontime: 16610 s
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | nevents: 400
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | neventsw: 0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | pid: 728867
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | pgrp: 728867
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | corecount: 3
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | event service: False
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | sizes: {0: 2404955, 1: 2405210, 4: 2405416, 11: 2405444, 6252: 2432165, 6253: 2441289, 6255: 2441289, 6333: 2441459}
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | --------------------------------------------------
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | 
[2025-06-04 20:20:28] 2025-06-04 11:20:08,213 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,223 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,223 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,223 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,223 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,223 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:20:28] 2025-06-04 11:20:08,223 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,223 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:20:28] 2025-06-04 11:20:08,223 | INFO     | job 6677550638 has completed (purged errors)
[2025-06-04 20:20:28] 2025-06-04 11:20:08,223 | INFO     | overall cleanup function is called
[2025-06-04 20:20:28] 2025-06-04 11:20:09,229 | INFO     | --- collectZombieJob: --- 10, [728867]
[2025-06-04 20:20:28] 2025-06-04 11:20:09,229 | INFO     | zombie collector waiting for pid 728867
[2025-06-04 20:20:28] 2025-06-04 11:20:09,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:20:28] 2025-06-04 11:20:09,229 | INFO     | collected zombie processes
[2025-06-04 20:20:28] 2025-06-04 11:20:09,229 | INFO     | will attempt to kill all subprocesses of pid=728867
[2025-06-04 20:20:28] 2025-06-04 11:20:09,259 | INFO     | process IDs to be killed: [728867] (in reverse order)
[2025-06-04 20:20:28] 2025-06-04 11:20:09,277 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:20:28] 2025-06-04 11:20:09,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:20:28] 2025-06-04 11:20:09,279 | INFO     | did not find any defunct processes belonging to 728867
[2025-06-04 20:20:28] 2025-06-04 11:20:09,280 | INFO     | did not find any defunct processes belonging to 728867
[2025-06-04 20:20:28] 2025-06-04 11:20:09,280 | INFO     | ready for new job
[2025-06-04 20:20:28] 2025-06-04 11:20:09,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:20:28] 2025-06-04 11:20:09,281 | INFO     | **************************************
[2025-06-04 20:20:28] 2025-06-04 11:20:09,281 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:20:28] 2025-06-04 11:20:09,281 | INFO     | **************************************
[2025-06-04 20:20:28] 2025-06-04 11:20:09,281 | INFO     | 
[2025-06-04 20:20:28] 2025-06-04 11:20:09,281 | INFO     | architecture information:
[2025-06-04 20:20:28] 2025-06-04 11:20:09,281 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:20:28] 2025-06-04 11:20:09,290 | INFO     | cat /etc/os-release:
[2025-06-04 20:20:28] NAME="CentOS Linux"
[2025-06-04 20:20:28] VERSION="7 (Core)"
[2025-06-04 20:20:28] ID="centos"
[2025-06-04 20:20:28] ID_LIKE="rhel fedora"
[2025-06-04 20:20:28] VERSION_ID="7"
[2025-06-04 20:20:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:20:28] ANSI_COLOR="0;31"
[2025-06-04 20:20:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:20:28] HOME_URL="https://www.centos.org/"
[2025-06-04 20:20:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:20:28] 
[2025-06-04 20:20:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:20:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:20:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:20:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:20:28] 
[2025-06-04 20:20:28] 2025-06-04 11:20:09,290 | INFO     | **************************************
[2025-06-04 20:20:28] 2025-06-04 11:20:09,793 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 20:20:28] 2025-06-04 11:20:09,801 | INFO     | sufficient remaining disk space (323457384448 B)
[2025-06-04 20:20:28] 2025-06-04 11:20:09,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:20:28] 2025-06-04 11:20:09,802 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:20:28] 2025-06-04 11:20:09,802 | INFO     | update_server=False
[2025-06-04 20:20:28] 2025-06-04 11:20:09,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:20:28] 2025-06-04 11:20:09,802 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:20:28] 2025-06-04 11:20:09,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:20:28] 2025-06-04 11:20:09,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:20:28] 2025-06-04 11:20:09,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:20:28] 2025-06-04 11:20:09,803 | INFO     | aborting loop
[2025-06-04 20:20:28] 2025-06-04 11:20:10,085 | INFO     | PID=722512 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 20:20:28] 2025-06-04 11:20:10,086 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:20:28] 2025-06-04 11:20:10,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:20:28] 2025-06-04 11:20:10,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:20:28] 2025-06-04 11:20:10,535 | INFO     | all data control threads have been joined
[2025-06-04 20:20:28] 2025-06-04 11:20:10,807 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:10,808 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:10,808 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:10,839 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:10,918 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:11,157 | INFO     | all payload control threads have been joined
[2025-06-04 20:20:28] 2025-06-04 11:20:11,225 | INFO     | all job control threads have been joined
[2025-06-04 20:20:28] 2025-06-04 11:20:11,540 | INFO     | [data] control thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:11,602 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:11,808 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:11,832 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:12,158 | INFO     | [job] validate thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:12,162 | INFO     | [payload] control thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:12,184 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:12,230 | INFO     | [job] control thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:12,357 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:13,807 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:20,539 | INFO     | job.realtimelogging is not enabled
[2025-06-04 20:20:28] 2025-06-04 11:20:21,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:20:28] 2025-06-04 11:20:23,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140134234146624)>', '<ExcThread(monitor, started 140133298857728)>']
[2025-06-04 20:20:28] 2025-06-04 11:20:24,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:20:28] 2025-06-04 11:20:24,153 | INFO     | [monitor] control thread has ended
[2025-06-04 20:20:28] 2025-06-04 11:20:28,404 | INFO     | all workflow threads have been joined
[2025-06-04 20:20:28] 2025-06-04 11:20:28,404 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:20:28] 2025-06-04 11:20:28,404 | INFO     | traces error code: 0
[2025-06-04 20:20:28] 2025-06-04 11:20:28,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:20:28] 2025-06-04 11:20:28,464 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:20:28] 2025-06-04 11:20:28,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:20:28] 2025-06-04 11:20:28,468 [wrapper] pilotpid: 722512
[2025-06-04 20:20:28] 2025-06-04 11:20:28,469 [wrapper] Pilot exit status: 0
[2025-06-04 20:20:28] 2025-06-04 11:20:28,475 [wrapper] pandaids: 6677550638
[2025-06-04 20:20:28] 2025-06-04 11:20:28,487 [wrapper] cleanup supervisor_pilot  742803 722513
[2025-06-04 20:20:28] 2025-06-04 11:20:28,489 [wrapper] Test setup, not cleaning
[2025-06-04 20:20:28] 2025-06-04 11:20:28,490 [wrapper] apfmon messages muted
[2025-06-04 20:20:28] 2025-06-04 11:20:28,492 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:20:28] 2025-06-04 11:20:28,493 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:20:28]  *** Error codes and diagnostics ***
[2025-06-04 20:20:28]     "exeErrorCode": 0,
[2025-06-04 20:20:28]     "exeErrorDiag": "",
[2025-06-04 20:20:28]     "pilotErrorCode": 0,
[2025-06-04 20:20:28]     "pilotErrorDiag": "",
[2025-06-04 20:20:28]  *** Listing of results directory ***
[2025-06-04 20:20:28] total 385756
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:07 pilot3.tar.gz
[2025-06-04 20:20:28] -rwx------. 1 boinc boinc     37140 Jun  3 18:28 runpilot2-wrapper.sh
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc      5111 Jun  3 18:28 queuedata.json
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:20:28] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:32 run_atlas
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:32 job.xml
[2025-06-04 20:20:28] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:32 start_atlas.sh
[2025-06-04 20:20:28] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:32 shared
[2025-06-04 20:20:28] -rw-r--r--. 2 boinc boinc    508875 Jun  4 18:32 input.tar.gz
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc      6507 Jun  4 18:32 init_data.xml
[2025-06-04 20:20:28] -rw-r--r--. 2 boinc boinc 215447912 Jun  4 18:32 EVNT.45006593._001086.pool.root.1
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:32 boinc_lockfile
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc      2524 Jun  4 18:32 pandaJob.out
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc    986766 Jun  4 18:34 agis_schedconf.cvmfs.json
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc   1603667 Jun  4 18:34 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:20:28] drwx------. 4 boinc boinc      4096 Jun  4 18:34 pilot3
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc 174114486 Jun  4 20:18 HITS.45006595._027145.pool.root.1
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc       529 Jun  4 20:18 boinc_task_state.xml
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc      1024 Jun  4 20:18 memory_monitor_summary.json
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc    226324 Jun  4 20:18 log.45006595._027145.job.log.tgz.1
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc        95 Jun  4 20:19 pilot_heartbeat.json
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc      7667 Jun  4 20:20 heartbeat.json
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc      8192 Jun  4 20:20 boinc_mmap_file
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc        27 Jun  4 20:20 wrapper_checkpoint.txt
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc      4744 Jun  4 20:20 pilotlog.txt
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc    587648 Jun  4 20:20 log.45006595._027145.job.log.1
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc       357 Jun  4 20:20 output.list
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc       620 Jun  4 20:20 runtime_log
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc    829440 Jun  4 20:20 result.tar.gz
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc       643 Jun  4 20:20 xFEMDmX7cg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrCjKDmfpALsm.diag
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc      8617 Jun  4 20:20 runtime_log.err
[2025-06-04 20:20:28] -rw-r--r--. 1 boinc boinc     20514 Jun  4 20:20 stderr.txt
[2025-06-04 20:20:28] HITS file was successfully produced:
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc 174114486 Jun  4 20:18 shared/HITS.pool.root.1
[2025-06-04 20:20:28]  *** Contents of shared directory: ***
[2025-06-04 20:20:28] total 381764
[2025-06-04 20:20:28] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:32 start_atlas.sh
[2025-06-04 20:20:28] -rw-r--r--. 2 boinc boinc    508875 Jun  4 18:32 input.tar.gz
[2025-06-04 20:20:28] -rw-r--r--. 2 boinc boinc 215447912 Jun  4 18:32 ATLAS.root_0
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc 174114486 Jun  4 20:18 HITS.pool.root.1
[2025-06-04 20:20:28] -rw-------. 1 boinc boinc    829440 Jun  4 20:20 result.tar.gz
20:20:30 (718307): run_atlas exited; CPU time 16634.182273
20:20:30 (718307): called boinc_finish(0)

</stderr_txt>
]]>

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