Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:32:25 (3294649): wrapper (7.7.26015): starting
06:32:25 (3294649): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 06:32:25] Arguments: --nthreads 4
[2025-06-06 06:32:25] Threads: 4
[2025-06-06 06:32:25] Checking for CVMFS
[2025-06-06 06:32:25] No cvmfs_config command found, will try listing directly
[2025-06-06 06:32:25] CVMFS is ok
[2025-06-06 06:32:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 06:32:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 06:32:25] Further information can be found at the LHC@home message board.
[2025-06-06 06:32:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 06:32:25] Checking for apptainer binary...
[2025-06-06 06:32:25] which: no apptainer in ((null))
[2025-06-06 06:32:25] apptainer is not installed, using version from CVMFS
[2025-06-06 06:32:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 06:32:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-06 06:32:26] apptainer works
[2025-06-06 06:32:26] Set ATHENA_PROC_NUMBER=4
[2025-06-06 06:32:26] Set ATHENA_CORE_NUMBER=4
[2025-06-06 06:32:26] Starting ATLAS job with PandaID=6677577236
[2025-06-06 06:32:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:00:34]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:00:34]  is_tar=False
[2025-06-06 08:00:34]  lfn=log.45006595._029033.job.log.tgz.1
[2025-06-06 08:00:34]  mtime=0
[2025-06-06 08:00:34]  protocol_id=None
[2025-06-06 08:00:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 08:00:34]  replicas=None
[2025-06-06 08:00:34]  scope=mc23_13p6TeV
[2025-06-06 08:00:34]  status=None
[2025-06-06 08:00:34]  status_code=0
[2025-06-06 08:00:34]  storage_token=
[2025-06-06 08:00:34]  surl=/scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6677577236/log.45006595._029033.job.log.tgz.1
[2025-06-06 08:00:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/29/log.45006595._029033.job.log.tgz.1
[2025-06-06 08:00:34]  workdir=None
[2025-06-06 08:00:34] ]
[2025-06-06 08:00:34] 2025-06-06 06:00:12,713 | INFO     | transferring file log.45006595._029033.job.log.tgz.1 from /scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6677577236/log.45006595._029033.job.log.tgz.1 to /scratch/b
[2025-06-06 08:00:34] 2025-06-06 06:00:12,713 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6677577236/log.45006595._029033.job.log.tgz.1 /scratch/boinc/var/slot72/slots/0/lo
[2025-06-06 08:00:34] 2025-06-06 06:00:12,731 | INFO     | adding to output.list: log.45006595._029033.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/29/log.45006595._029033.job.log.tg
[2025-06-06 08:00:34] 2025-06-06 06:00:12,732 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 08:00:34] 2025-06-06 06:00:12,732 | INFO     | summary of transferred files:
[2025-06-06 08:00:34] 2025-06-06 06:00:12,732 | INFO     |  -- lfn=log.45006595._029033.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 08:00:34] 2025-06-06 06:00:12,732 | INFO     | stage-out finished correctly
[2025-06-06 08:00:34] 2025-06-06 06:00:12,791 | INFO     | monitor loop #380: job 0:6677577236 is in state 'finished'
[2025-06-06 08:00:34] 2025-06-06 06:00:12,792 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 08:00:34] 2025-06-06 06:00:12,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:00:34] 2025-06-06 06:00:12,891 | INFO     | job 6677577236 has state=finished
[2025-06-06 08:00:34] 2025-06-06 06:00:12,891 | INFO     | preparing for final server update for job 6677577236 in state='finished'
[2025-06-06 08:00:34] 2025-06-06 06:00:13,476 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-06 08:00:34] 2025-06-06 06:00:13,476 | INFO     | this job has now completed (state=finished)
[2025-06-06 08:00:34] 2025-06-06 06:00:13,476 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 08:00:34] 2025-06-06 06:00:13,476 | INFO     | log transfer has been attempted: DONE
[2025-06-06 08:00:34] 2025-06-06 06:00:13,477 | INFO     | job 6677577236 has finished - writing final server update
[2025-06-06 08:00:34] 2025-06-06 06:00:13,477 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_6553/.job.ad'
[2025-06-06 08:00:34] 2025-06-06 06:00:13,477 | INFO     | total number of processed events: 400 (read)
[2025-06-06 08:00:34] 2025-06-06 06:00:13,485 | INFO     | executing command: lscpu
[2025-06-06 08:00:34] 2025-06-06 06:00:13,566 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 08:00:34] 2025-06-06 06:00:15,301 | INFO     | monitor loop #381: job 0:6677577236 is in state 'finished'
[2025-06-06 08:00:34] 2025-06-06 06:00:15,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:00:34] 2025-06-06 06:00:17,803 | INFO     | monitor loop #382: job 0:6677577236 is in state 'finished'
[2025-06-06 08:00:34] 2025-06-06 06:00:17,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 08:00:34] 2025-06-06 06:00:17,915 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 08:00:34] 2025-06-06 06:00:17,916 | INFO     | using path: /scratch/boinc/var/slot72/slots/0/PanDA_Pilot-6677577236/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 08:00:34] 2025-06-06 06:00:17,917 | INFO     | extracted standard info from prmon json
[2025-06-06 08:00:34] 2025-06-06 06:00:17,917 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 08:00:34] 2025-06-06 06:00:17,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 08:00:34] 2025-06-06 06:00:17,917 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 08:00:34] 2025-06-06 06:00:17,917 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 08:00:34] 2025-06-06 06:00:17,919 | INFO     | fitting pss+swap vs Time
[2025-06-06 08:00:34] 2025-06-06 06:00:17,919 | INFO     | sum of square deviations: 152858680.0
[2025-06-06 08:00:34] 2025-06-06 06:00:17,920 | INFO     | sum of deviations: -7848335639.999999
[2025-06-06 08:00:34] 2025-06-06 06:00:17,920 | INFO     | mean x: 1749187065.0
[2025-06-06 08:00:34] 2025-06-06 06:00:17,920 | INFO     | mean y: 2416826.139240506
[2025-06-06 08:00:34] 2025-06-06 06:00:17,920 | INFO     | -- intersect: 89812214891.03484
[2025-06-06 08:00:34] 2025-06-06 06:00:17,920 | INFO     | intersect: 89812214891.03484
[2025-06-06 08:00:34] 2025-06-06 06:00:17,920 | INFO     | chi2: 0.043359844085097625
[2025-06-06 08:00:34] 2025-06-06 06:00:17,920 | INFO     | -- intersect: 89812214891.03484
[2025-06-06 08:00:34] 2025-06-06 06:00:17,920 | INFO     | current memory leak: -51.34 B/s (using 79 data points, chi2=0.04)
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | ..............................
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | . Timing measurements:
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | . get job = 0 s
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | . initial setup = 1 s
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | . payload setup = 6 s
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | . stage-in = 0 s
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | . payload execution = 5230 s
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | . stage-out = 0 s
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | . log creation = 0 s
[2025-06-06 08:00:34] 2025-06-06 06:00:17,921 | INFO     | ..............................
[2025-06-06 08:00:34] 2025-06-06 06:00:18,005 | INFO     | 
[2025-06-06 08:00:34] 2025-06-06 06:00:18,005 | INFO     | job summary report
[2025-06-06 08:00:34] 2025-06-06 06:00:18,005 | INFO     | --------------------------------------------------
[2025-06-06 08:00:34] 2025-06-06 06:00:18,005 | INFO     | PanDA job id: 6677577236
[2025-06-06 08:00:34] 2025-06-06 06:00:18,005 | INFO     | task id: 45006595
[2025-06-06 08:00:34] 2025-06-06 06:00:18,005 | INFO     | errors: (none)
[2025-06-06 08:00:34] 2025-06-06 06:00:18,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | pilot state: finished 
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | transexitcode: 0
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | exeerrorcode: 0
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | exeerrordiag: 
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | exitcode: 0
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | exitmsg: OK
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | cpuconsumptiontime: 19766 s
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | nevents: 400
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | neventsw: 0
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | pid: 3305986
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | pgrp: 3305986
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | corecount: 4
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | event service: False
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | sizes: {0: 2397353, 4: 2397559, 11: 2397587, 5240: 2423889, 5242: 2432908, 5247: 2433022}
[2025-06-06 08:00:34] 2025-06-06 06:00:18,006 | INFO     | --------------------------------------------------
[2025-06-06 08:00:34] 2025-06-06 06:00:18,007 | INFO     | 
[2025-06-06 08:00:34] 2025-06-06 06:00:18,007 | INFO     | executing command: ls -lF /scratch/boinc/var/slot72/slots/0
[2025-06-06 08:00:34] 2025-06-06 06:00:18,027 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,028 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:00:34] 2025-06-06 06:00:18,029 | INFO     | job 6677577236 has completed (purged errors)
[2025-06-06 08:00:34] 2025-06-06 06:00:18,029 | INFO     | overall cleanup function is called
[2025-06-06 08:00:34] 2025-06-06 06:00:19,037 | INFO     | --- collectZombieJob: --- 10, [3305986]
[2025-06-06 08:00:34] 2025-06-06 06:00:19,037 | INFO     | zombie collector waiting for pid 3305986
[2025-06-06 08:00:34] 2025-06-06 06:00:19,037 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:00:34] 2025-06-06 06:00:19,038 | INFO     | collected zombie processes
[2025-06-06 08:00:34] 2025-06-06 06:00:19,038 | INFO     | will attempt to kill all subprocesses of pid=3305986
[2025-06-06 08:00:34] 2025-06-06 06:00:19,487 | INFO     | process IDs to be killed: [3305986] (in reverse order)
[2025-06-06 08:00:34] 2025-06-06 06:00:19,625 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:00:34] 2025-06-06 06:00:19,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:00:34] 2025-06-06 06:00:19,642 | INFO     | did not find any defunct processes belonging to 3305986
[2025-06-06 08:00:34] 2025-06-06 06:00:19,654 | INFO     | did not find any defunct processes belonging to 3305986
[2025-06-06 08:00:34] 2025-06-06 06:00:19,654 | INFO     | ready for new job
[2025-06-06 08:00:34] 2025-06-06 06:00:19,654 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:00:34] 2025-06-06 06:00:19,655 | INFO     | **************************************
[2025-06-06 08:00:34] 2025-06-06 06:00:19,655 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:00:34] 2025-06-06 06:00:19,656 | INFO     | **************************************
[2025-06-06 08:00:34] 2025-06-06 06:00:19,656 | INFO     | 
[2025-06-06 08:00:34] 2025-06-06 06:00:19,661 | INFO     | architecture information:
[2025-06-06 08:00:34] 2025-06-06 06:00:19,661 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:00:34] 2025-06-06 06:00:19,675 | INFO     | cat /etc/os-release:
[2025-06-06 08:00:34] NAME="CentOS Linux"
[2025-06-06 08:00:34] VERSION="7 (Core)"
[2025-06-06 08:00:34] ID="centos"
[2025-06-06 08:00:34] ID_LIKE="rhel fedora"
[2025-06-06 08:00:34] VERSION_ID="7"
[2025-06-06 08:00:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:00:34] ANSI_COLOR="0;31"
[2025-06-06 08:00:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:00:34] HOME_URL="https://www.centos.org/"
[2025-06-06 08:00:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:00:34] 
[2025-06-06 08:00:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:00:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:00:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:00:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:00:34] 
[2025-06-06 08:00:34] 2025-06-06 06:00:19,675 | INFO     | **************************************
[2025-06-06 08:00:34] 2025-06-06 06:00:20,177 | INFO     | executing command: df -mP /scratch/boinc/var/slot72/slots/0
[2025-06-06 08:00:34] 2025-06-06 06:00:20,194 | INFO     | sufficient remaining disk space (3309597360128 B)
[2025-06-06 08:00:34] 2025-06-06 06:00:20,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:00:34] 2025-06-06 06:00:20,195 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:00:34] 2025-06-06 06:00:20,195 | INFO     | update_server=False
[2025-06-06 08:00:34] 2025-06-06 06:00:20,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:00:34] 2025-06-06 06:00:20,308 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-06 08:00:34] 2025-06-06 06:00:20,308 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-06 08:00:34] 2025-06-06 06:00:20,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:00:34] 2025-06-06 06:00:20,308 | INFO     | will abort loop
[2025-06-06 08:00:34] 2025-06-06 06:00:20,763 | INFO     | all data control threads have been joined
[2025-06-06 08:00:34] 2025-06-06 06:00:20,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:00:34] 2025-06-06 06:00:20,819 | INFO     | all job control threads have been joined
[2025-06-06 08:00:34] 2025-06-06 06:00:21,163 | INFO     | all payload control threads have been joined
[2025-06-06 08:00:34] 2025-06-06 06:00:21,197 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:00:34] 2025-06-06 06:00:21,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:00:34] 2025-06-06 06:00:21,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:00:34] 2025-06-06 06:00:21,200 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:21,314 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:21,366 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:21,436 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:21,769 | INFO     | [data] control thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:21,799 | INFO     | [job] validate thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:21,825 | INFO     | [job] control thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:21,871 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:21,910 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:22,168 | INFO     | [payload] control thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:22,219 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:22,325 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:22,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:22,808 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:23,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:00:34] 2025-06-06 06:00:23,390 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:00:34] 2025-06-06 06:00:24,021 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:27,397 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:00:34] 2025-06-06 06:00:29,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22679363430208)>', '<ExcThread(monitor, started 22679128086272)>']
[2025-06-06 08:00:34] 2025-06-06 06:00:30,238 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:00:34] 2025-06-06 06:00:30,238 | INFO     | [monitor] control thread has ended
[2025-06-06 08:00:34] 2025-06-06 06:00:34,416 | INFO     | all workflow threads have been joined
[2025-06-06 08:00:34] 2025-06-06 06:00:34,416 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:00:34] 2025-06-06 06:00:34,416 | INFO     | traces error code: 0
[2025-06-06 08:00:34] 2025-06-06 06:00:34,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:00:34] 2025-06-06 06:00:34,542 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:00:34] 2025-06-06 06:00:34,546 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:00:34] 2025-06-06 06:00:34,550 [wrapper] pilotpid: 3298575
[2025-06-06 08:00:34] 2025-06-06 06:00:34,554 [wrapper] Pilot exit status: 0
[2025-06-06 08:00:34] 2025-06-06 06:00:34,569 [wrapper] pandaids: 6677577236
[2025-06-06 08:00:34] 2025-06-06 06:00:34,694 [wrapper] cleanup supervisor_pilot 3472580 3298576
[2025-06-06 08:00:34] 2025-06-06 06:00:34,698 [wrapper] Test setup, not cleaning
[2025-06-06 08:00:34] 2025-06-06 06:00:34,701 [wrapper] apfmon messages muted
[2025-06-06 08:00:34] 2025-06-06 06:00:34,705 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:00:34] 2025-06-06 06:00:34,709 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:00:34]  *** Error codes and diagnostics ***
[2025-06-06 08:00:34]     "exeErrorCode": 0,
[2025-06-06 08:00:34]     "exeErrorDiag": "",
[2025-06-06 08:00:34]     "pilotErrorCode": 0,
[2025-06-06 08:00:34]     "pilotErrorDiag": "",
[2025-06-06 08:00:34]  *** Listing of results directory ***
[2025-06-06 08:00:34] total 388776
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc    495897 Jun  3 12:30 pilot3.tar.gz
[2025-06-06 08:00:34] -rwx------ 1 boinc boinc     37140 Jun  3 12:31 runpilot2-wrapper.sh
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc      5111 Jun  3 12:31 queuedata.json
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc       100 Jun  6 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:00:34] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 06:32 run_atlas
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc       105 Jun  6 06:32 job.xml
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc      6683 Jun  6 06:32 init_data.xml
[2025-06-06 08:00:34] -rw-r--r-- 2 boinc boinc 215199834 Jun  6 06:32 EVNT.45006593._001161.pool.root.1
[2025-06-06 08:00:34] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:32 start_atlas.sh
[2025-06-06 08:00:34] drwxrwx--x 2 boinc boinc      4096 Jun  6 06:32 shared
[2025-06-06 08:00:34] -rw-r--r-- 2 boinc boinc    508875 Jun  6 06:32 input.tar.gz
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc         0 Jun  6 06:32 boinc_lockfile
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc      2525 Jun  6 06:32 pandaJob.out
[2025-06-06 08:00:34] -rw------- 1 boinc boinc    988125 Jun  6 06:32 agis_schedconf.cvmfs.json
[2025-06-06 08:00:34] -rw------- 1 boinc boinc   1598969 Jun  6 06:32 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:00:34] drwx------ 4 boinc boinc      4096 Jun  6 06:32 pilot3
[2025-06-06 08:00:34] -rw------- 1 boinc boinc 177567398 Jun  6 07:59 HITS.45006595._029033.pool.root.1
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc       528 Jun  6 08:00 boinc_task_state.xml
[2025-06-06 08:00:34] -rw------- 1 boinc boinc        95 Jun  6 08:00 pilot_heartbeat.json
[2025-06-06 08:00:34] -rw------- 1 boinc boinc      1040 Jun  6 08:00 memory_monitor_summary.json
[2025-06-06 08:00:34] -rw------- 1 boinc boinc    244231 Jun  6 08:00 log.45006595._029033.job.log.tgz.1
[2025-06-06 08:00:34] -rw------- 1 boinc boinc      7694 Jun  6 08:00 heartbeat.json
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc        26 Jun  6 08:00 wrapper_checkpoint.txt
[2025-06-06 08:00:34] -rw------- 1 boinc boinc      4550 Jun  6 08:00 pilotlog.txt
[2025-06-06 08:00:34] -rw------- 1 boinc boinc    506878 Jun  6 08:00 log.45006595._029033.job.log.1
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc      8192 Jun  6 08:00 boinc_mmap_file
[2025-06-06 08:00:34] -rw------- 1 boinc boinc       357 Jun  6 08:00 output.list
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc       620 Jun  6 08:00 runtime_log
[2025-06-06 08:00:34] -rw------- 1 boinc boinc    768000 Jun  6 08:00 result.tar.gz
[2025-06-06 08:00:34] -rw------- 1 boinc boinc       661 Jun  6 08:00 y84LDmb6dg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrJYKDmKS7f1m.diag
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc      9025 Jun  6 08:00 runtime_log.err
[2025-06-06 08:00:34] -rw-r--r-- 1 boinc boinc     21315 Jun  6 08:00 stderr.txt
[2025-06-06 08:00:34] HITS file was successfully produced:
[2025-06-06 08:00:34] -rw------- 1 boinc boinc 177567398 Jun  6 07:59 shared/HITS.pool.root.1
[2025-06-06 08:00:34]  *** Contents of shared directory: ***
[2025-06-06 08:00:34] total 384844
[2025-06-06 08:00:34] -rw-r--r-- 2 boinc boinc 215199834 Jun  6 06:32 ATLAS.root_0
[2025-06-06 08:00:34] -rw-r--r-- 2 boinc boinc     15093 Jun  6 06:32 start_atlas.sh
[2025-06-06 08:00:34] -rw-r--r-- 2 boinc boinc    508875 Jun  6 06:32 input.tar.gz
[2025-06-06 08:00:34] -rw------- 1 boinc boinc 177567398 Jun  6 07:59 HITS.pool.root.1
[2025-06-06 08:00:34] -rw------- 1 boinc boinc    768000 Jun  6 08:00 result.tar.gz
08:01:47 (3294649): run_atlas exited; CPU time 19990.926086
08:01:47 (3294649): called boinc_finish(0)

</stderr_txt>
]]>

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