Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:12:35 (595): wrapper (7.7.26015): starting
09:12:35 (595): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:12:35] Arguments: --nthreads 8
[2025-06-03 09:12:35] Threads: 8
[2025-06-03 09:12:35] Checking for CVMFS
[2025-06-03 09:12:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:12:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:12:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:12:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:12:37] 2.11.2.0 4366 34239 76832 146742 2 187 14590524 18432001 1833 130560 0 13424609 99.032 34113398 20892 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 09:12:37] CVMFS is ok
[2025-06-03 09:12:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:12:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:12:37] Further information can be found at the LHC@home message board.
[2025-06-03 09:12:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:12:37] Checking for apptainer binary...
[2025-06-03 09:12:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:12:37] Running /usr/bin/apptainer --version
[2025-06-03 09:12:37] apptainer version 1.3.2-1.el7
[2025-06-03 09:12:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:12:50] c-206-29.aglt2.org
[2025-06-03 09:12:50] apptainer works
[2025-06-03 09:12:50] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:12:50] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:12:50] Starting ATLAS job with PandaID=6677578583
[2025-06-03 09:12:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:16:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:16:11] 2025-06-03 16:15:57,304 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 12:16:11] 2025-06-03 16:15:57,304 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6677578583/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:16:11] 2025-06-03 16:15:57,305 | INFO     | extracted standard info from prmon json
[2025-06-03 12:16:11] 2025-06-03 16:15:57,305 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:16:11] 2025-06-03 16:15:57,305 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:16:11] 2025-06-03 16:15:57,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:16:11] 2025-06-03 16:15:57,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:16:11] 2025-06-03 16:15:57,311 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:16:11] 2025-06-03 16:15:57,312 | INFO     | sum of square deviations: 1661798600.0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,313 | INFO     | sum of deviations: 41685491370.99999
[2025-06-03 12:16:11] 2025-06-03 16:15:57,313 | INFO     | mean x: 1748961993.0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,313 | INFO     | mean y: 2448959.6914285715
[2025-06-03 12:16:11] 2025-06-03 16:15:57,314 | INFO     | -- intersect: -43869498018.36503
[2025-06-03 12:16:11] 2025-06-03 16:15:57,314 | INFO     | intersect: -43869498018.36503
[2025-06-03 12:16:11] 2025-06-03 16:15:57,314 | INFO     | chi2: 3.369446171180573
[2025-06-03 12:16:11] 2025-06-03 16:15:57,315 | INFO     | sum of square deviations: 1523386702.5
[2025-06-03 12:16:11] 2025-06-03 16:15:57,316 | INFO     | sum of deviations: 40520250400.0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,316 | INFO     | mean x: 1748961840.5
[2025-06-03 12:16:11] 2025-06-03 16:15:57,317 | INFO     | mean y: 2447675.4470588234
[2025-06-03 12:16:11] 2025-06-03 16:15:57,317 | INFO     | -- intersect: -46517829546.87881
[2025-06-03 12:16:11] 2025-06-03 16:15:57,317 | INFO     | intersect: -46517829546.87881
[2025-06-03 12:16:11] 2025-06-03 16:15:57,317 | INFO     | chi2: 3.375357363442289
[2025-06-03 12:16:11] 2025-06-03 16:15:57,318 | INFO     | current chi2=3.375357363442289 (change=-0.17543512973363568 %)
[2025-06-03 12:16:11] 2025-06-03 16:15:57,318 | INFO     | right removable region: 169
[2025-06-03 12:16:11] 2025-06-03 16:15:57,318 | INFO     | sum of square deviations: 1523386702.5
[2025-06-03 12:16:11] 2025-06-03 16:15:57,319 | INFO     | sum of deviations: -6568947961.500002
[2025-06-03 12:16:11] 2025-06-03 16:15:57,320 | INFO     | mean x: 1748962145.5
[2025-06-03 12:16:11] 2025-06-03 16:15:57,320 | INFO     | mean y: 2501859.1117647057
[2025-06-03 12:16:11] 2025-06-03 16:15:57,320 | INFO     | -- intersect: 7544146604.7097025
[2025-06-03 12:16:11] 2025-06-03 16:15:57,320 | INFO     | intersect: 7544146604.7097025
[2025-06-03 12:16:11] 2025-06-03 16:15:57,321 | INFO     | chi2: 0.10908749190922792
[2025-06-03 12:16:11] 2025-06-03 16:15:57,321 | INFO     | current chi2=0.10908749190922792 (change=96.76245037412168 %)
[2025-06-03 12:16:11] 2025-06-03 16:15:57,321 | INFO     | sum of square deviations: 1392881930.0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,322 | INFO     | sum of deviations: -11843794953.000002
[2025-06-03 12:16:11] 2025-06-03 16:15:57,323 | INFO     | mean x: 1748962298.0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,323 | INFO     | mean y: 2507921.8424242423
[2025-06-03 12:16:11] 2025-06-03 16:15:57,323 | INFO     | -- intersect: 14874084896.094425
[2025-06-03 12:16:11] 2025-06-03 16:15:57,323 | INFO     | intersect: 14874084896.094425
[2025-06-03 12:16:11] 2025-06-03 16:15:57,324 | INFO     | chi2: 0.030574178371216267
[2025-06-03 12:16:11] 2025-06-03 16:15:57,324 | INFO     | current chi2=0.030574178371216267 (change=71.9727918974825 %)
[2025-06-03 12:16:11] 2025-06-03 16:15:57,324 | INFO     | sum of square deviations: 1270051720.0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,325 | INFO     | sum of deviations: -10396429470.000004
[2025-06-03 12:16:11] 2025-06-03 16:15:57,326 | INFO     | mean x: 1748962450.5
[2025-06-03 12:16:11] 2025-06-03 16:15:57,326 | INFO     | mean y: 2506116.025
[2025-06-03 12:16:11] 2025-06-03 16:15:57,326 | INFO     | -- intersect: 14319218164.808037
[2025-06-03 12:16:11] 2025-06-03 16:15:57,326 | INFO     | intersect: 14319218164.808037
[2025-06-03 12:16:11] 2025-06-03 16:15:57,327 | INFO     | chi2: 0.030138928650370538
[2025-06-03 12:16:11] 2025-06-03 16:15:57,327 | INFO     | current chi2=0.030138928650370538 (change=1.4235859932559634 %)
[2025-06-03 12:16:11] 2025-06-03 16:15:57,327 | INFO     | left removable region: 30
[2025-06-03 12:16:11] 2025-06-03 16:15:57,327 | INFO     | sum of square deviations: 832722590.0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,328 | INFO     | sum of deviations: -3676164146.0000005
[2025-06-03 12:16:11] 2025-06-03 16:15:57,329 | INFO     | mean x: 1748962725.0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,329 | INFO     | mean y: 2496920.294964029
[2025-06-03 12:16:11] 2025-06-03 16:15:57,329 | INFO     | -- intersect: 7723524474.423715
[2025-06-03 12:16:11] 2025-06-03 16:15:57,329 | INFO     | intersect: 7723524474.423715
[2025-06-03 12:16:11] 2025-06-03 16:15:57,330 | INFO     | chi2: 0.019781244753199662
[2025-06-03 12:16:11] 2025-06-03 16:15:57,330 | INFO     | -- intersect: 7723524474.423715
[2025-06-03 12:16:11] 2025-06-03 16:15:57,330 | INFO     | current memory leak: -4.41 B/s (using 139 data points, chi2=0.02)
[2025-06-03 12:16:11] 2025-06-03 16:15:57,331 | INFO     | ..............................
[2025-06-03 12:16:11] 2025-06-03 16:15:57,331 | INFO     | . Timing measurements:
[2025-06-03 12:16:11] 2025-06-03 16:15:57,331 | INFO     | . get job = 0 s
[2025-06-03 12:16:11] 2025-06-03 16:15:57,331 | INFO     | . initial setup = 6 s
[2025-06-03 12:16:11] 2025-06-03 16:15:57,331 | INFO     | . payload setup = 79 s
[2025-06-03 12:16:11] 2025-06-03 16:15:57,331 | INFO     | . stage-in = 0 s
[2025-06-03 12:16:11] 2025-06-03 16:15:57,332 | INFO     | . payload execution = 10720 s
[2025-06-03 12:16:11] 2025-06-03 16:15:57,332 | INFO     | . stage-out = 2 s
[2025-06-03 12:16:11] 2025-06-03 16:15:57,332 | INFO     | . log creation = 0 s
[2025-06-03 12:16:11] 2025-06-03 16:15:57,332 | INFO     | ..............................
[2025-06-03 12:16:11] 2025-06-03 16:15:57,692 | INFO     | 
[2025-06-03 12:16:11] 2025-06-03 16:15:57,692 | INFO     | job summary report
[2025-06-03 12:16:11] 2025-06-03 16:15:57,692 | INFO     | --------------------------------------------------
[2025-06-03 12:16:11] 2025-06-03 16:15:57,692 | INFO     | PanDA job id: 6677578583
[2025-06-03 12:16:11] 2025-06-03 16:15:57,693 | INFO     | task id: 45006595
[2025-06-03 12:16:11] 2025-06-03 16:15:57,693 | INFO     | errors: (none)
[2025-06-03 12:16:11] 2025-06-03 16:15:57,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:16:11] 2025-06-03 16:15:57,693 | INFO     | pilot state: finished 
[2025-06-03 12:16:11] 2025-06-03 16:15:57,693 | INFO     | transexitcode: 0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,693 | INFO     | exeerrorcode: 0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,694 | INFO     | exeerrordiag: 
[2025-06-03 12:16:11] 2025-06-03 16:15:57,694 | INFO     | exitcode: 0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,694 | INFO     | exitmsg: OK
[2025-06-03 12:16:11] 2025-06-03 16:15:57,694 | INFO     | cpuconsumptiontime: 76031 s
[2025-06-03 12:16:11] 2025-06-03 16:15:57,694 | INFO     | nevents: 400
[2025-06-03 12:16:11] 2025-06-03 16:15:57,694 | INFO     | neventsw: 0
[2025-06-03 12:16:11] 2025-06-03 16:15:57,695 | INFO     | pid: 15354
[2025-06-03 12:16:11] 2025-06-03 16:15:57,695 | INFO     | pgrp: 15354
[2025-06-03 12:16:11] 2025-06-03 16:15:57,695 | INFO     | corecount: 8
[2025-06-03 12:16:11] 2025-06-03 16:15:57,695 | INFO     | event service: False
[2025-06-03 12:16:11] 2025-06-03 16:15:57,695 | INFO     | sizes: {0: 2404957, 1: 2405013, 2: 2405240, 3: 2405240, 13: 2405268, 24: 2405324, 35: 2405480, 44: 2405714, 46: 2405742, 10803: 2434440, 10804: 2434439, 10806: 244
[2025-06-03 12:16:11] 2025-06-03 16:15:57,695 | INFO     | --------------------------------------------------
[2025-06-03 12:16:11] 2025-06-03 16:15:57,696 | INFO     | 
[2025-06-03 12:16:11] 2025-06-03 16:15:57,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-06-03 12:16:11] 2025-06-03 16:15:57,754 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,755 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,755 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,755 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,755 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,755 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,756 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,756 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,756 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,756 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,756 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,757 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,758 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:16:11] 2025-06-03 16:15:57,758 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,758 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:16:11] 2025-06-03 16:15:57,758 | INFO     | job 6677578583 has completed (purged errors)
[2025-06-03 12:16:11] 2025-06-03 16:15:57,758 | INFO     | overall cleanup function is called
[2025-06-03 12:16:11] 2025-06-03 16:15:58,767 | INFO     | --- collectZombieJob: --- 10, [15354]
[2025-06-03 12:16:11] 2025-06-03 16:15:58,767 | INFO     | zombie collector waiting for pid 15354
[2025-06-03 12:16:11] 2025-06-03 16:15:58,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:16:11] 2025-06-03 16:15:58,767 | INFO     | collected zombie processes
[2025-06-03 12:16:11] 2025-06-03 16:15:58,768 | INFO     | will attempt to kill all subprocesses of pid=15354
[2025-06-03 12:16:11] 2025-06-03 16:15:58,937 | INFO     | process IDs to be killed: [15354] (in reverse order)
[2025-06-03 12:16:11] 2025-06-03 16:15:58,992 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:16:11] 2025-06-03 16:15:58,992 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:16:11] 2025-06-03 16:15:58,997 | INFO     | did not find any defunct processes belonging to 15354
[2025-06-03 12:16:11] 2025-06-03 16:15:59,002 | INFO     | did not find any defunct processes belonging to 15354
[2025-06-03 12:16:11] 2025-06-03 16:15:59,010 | INFO     | ready for new job
[2025-06-03 12:16:11] 2025-06-03 16:15:59,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:16:11] 2025-06-03 16:15:59,012 | INFO     | **************************************
[2025-06-03 12:16:11] 2025-06-03 16:15:59,012 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:16:11] 2025-06-03 16:15:59,012 | INFO     | **************************************
[2025-06-03 12:16:11] 2025-06-03 16:15:59,012 | INFO     | 
[2025-06-03 12:16:11] 2025-06-03 16:15:59,014 | INFO     | architecture information:
[2025-06-03 12:16:11] 2025-06-03 16:15:59,014 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:16:11] 2025-06-03 16:15:59,026 | INFO     | cat /etc/os-release:
[2025-06-03 12:16:11] NAME="CentOS Linux"
[2025-06-03 12:16:11] VERSION="7 (Core)"
[2025-06-03 12:16:11] ID="centos"
[2025-06-03 12:16:11] ID_LIKE="rhel fedora"
[2025-06-03 12:16:11] VERSION_ID="7"
[2025-06-03 12:16:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:16:11] ANSI_COLOR="0;31"
[2025-06-03 12:16:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:16:11] HOME_URL="https://www.centos.org/"
[2025-06-03 12:16:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:16:11] 
[2025-06-03 12:16:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:16:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:16:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:16:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:16:11] 
[2025-06-03 12:16:11] 2025-06-03 16:15:59,027 | INFO     | **************************************
[2025-06-03 12:16:11] 2025-06-03 16:15:59,529 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-06-03 12:16:11] 2025-06-03 16:15:59,542 | INFO     | sufficient remaining disk space (28077719552 B)
[2025-06-03 12:16:11] 2025-06-03 16:15:59,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:16:11] 2025-06-03 16:15:59,543 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:16:11] 2025-06-03 16:15:59,543 | INFO     | update_server=False
[2025-06-03 12:16:11] 2025-06-03 16:15:59,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:16:11] 2025-06-03 16:15:59,643 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:16:11] 2025-06-03 16:15:59,644 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:16:11] 2025-06-03 16:15:59,644 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:16:11] 2025-06-03 16:15:59,673 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:16:11] 2025-06-03 16:15:59,673 | INFO     | aborting loop
[2025-06-03 12:16:11] 2025-06-03 16:15:59,759 | INFO     | all job control threads have been joined
[2025-06-03 12:16:11] 2025-06-03 16:16:00,455 | INFO     | all payload control threads have been joined
[2025-06-03 12:16:11] 2025-06-03 16:16:00,543 | INFO     | all data control threads have been joined
[2025-06-03 12:16:11] 2025-06-03 16:16:00,548 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:00,679 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:00,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:00,764 | INFO     | [job] control thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:00,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:16:11] 2025-06-03 16:16:00,889 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:01,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:16:11] 2025-06-03 16:16:01,200 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:01,461 | INFO     | [payload] control thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:01,548 | INFO     | [data] control thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:01,548 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:01,567 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:01,585 | INFO     | [job] validate thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:01,850 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:01,879 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:02,431 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:16:11] 2025-06-03 16:16:02,884 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:03,436 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:05,155 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:16:11] 2025-06-03 16:16:06,023 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989142021952)>', '<ExcThread(monitor, started 139988486321920)>']
[2025-06-03 12:16:11] 2025-06-03 16:16:06,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:16:11] 2025-06-03 16:16:06,673 | INFO     | [monitor] control thread has ended
[2025-06-03 12:16:11] 2025-06-03 16:16:11,026 | INFO     | all workflow threads have been joined
[2025-06-03 12:16:11] 2025-06-03 16:16:11,026 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:16:11] 2025-06-03 16:16:11,026 | INFO     | traces error code: 0
[2025-06-03 12:16:11] 2025-06-03 16:16:11,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:16:11] 2025-06-03 16:16:11,122 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:16:11] 2025-06-03 16:16:11,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:16:11] 2025-06-03 16:16:11,127 [wrapper] pilotpid: 5423
[2025-06-03 12:16:11] 2025-06-03 16:16:11,129 [wrapper] Pilot exit status: 0
[2025-06-03 12:16:11] 2025-06-03 16:16:11,139 [wrapper] pandaids: 6677578583
[2025-06-03 12:16:11] 2025-06-03 16:16:11,180 [wrapper] cleanup supervisor_pilot 16863 5424
[2025-06-03 12:16:11] 2025-06-03 16:16:11,183 [wrapper] Test setup, not cleaning
[2025-06-03 12:16:11] 2025-06-03 16:16:11,185 [wrapper] apfmon messages muted
[2025-06-03 12:16:11] 2025-06-03 16:16:11,188 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:16:11] 2025-06-03 16:16:11,190 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:16:11]  *** Error codes and diagnostics ***
[2025-06-03 12:16:11]     "exeErrorCode": 0,
[2025-06-03 12:16:11]     "exeErrorDiag": "",
[2025-06-03 12:16:11]     "pilotErrorCode": 0,
[2025-06-03 12:16:11]     "pilotErrorDiag": "",
[2025-06-03 12:16:11]  *** Listing of results directory ***
[2025-06-03 12:16:11] total 394704
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 06:43 pilot3.tar.gz
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 06:46 queuedata.json
[2025-06-03 12:16:11] -rwx------ 1 boincer umatlas     37140 Jun  3 06:47 runpilot2-wrapper.sh
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas       100 Jun  3 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:16:11] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 09:12 run_atlas
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas       105 Jun  3 09:12 job.xml
[2025-06-03 12:16:11] -rw-r--r-- 2 boincer umatlas 214612025 Jun  3 09:12 EVNT.45006593._001181.pool.root.1
[2025-06-03 12:16:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 09:12 start_atlas.sh
[2025-06-03 12:16:11] drwxrwx--x 2 boincer umatlas      4096 Jun  3 09:12 shared
[2025-06-03 12:16:11] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 09:12 input.tar.gz
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas         0 Jun  3 09:12 boinc_lockfile
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 09:12 pandaJob.out
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas    982724 Jun  3 09:14 agis_schedconf.cvmfs.json
[2025-06-03 12:16:11] drwx------ 4 boincer umatlas      4096 Jun  3 09:14 pilot3
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas      5950 Jun  3 12:09 init_data.xml
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas        95 Jun  3 12:15 pilot_heartbeat.json
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas 183029663 Jun  3 12:15 HITS.45006595._029542.pool.root.1
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas       531 Jun  3 12:15 boinc_task_state.xml
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas      1056 Jun  3 12:15 memory_monitor_summary.json
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas   1603667 Jun  3 12:15 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas    368061 Jun  3 12:15 log.45006595._029542.job.log.tgz.1
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas      7758 Jun  3 12:15 heartbeat.json
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 12:16 boinc_mmap_file
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas        28 Jun  3 12:16 wrapper_checkpoint.txt
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas      4353 Jun  3 12:16 pilotlog.txt
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas    987735 Jun  3 12:16 log.45006595._029542.job.log.1
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas       357 Jun  3 12:16 output.list
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas       620 Jun  3 12:16 runtime_log
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas   1372160 Jun  3 12:16 result.tar.gz
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas       663 Jun  3 12:16 spuKDmZMeg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYZjKDmHMEYJm.diag
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas      8660 Jun  3 12:16 runtime_log.err
[2025-06-03 12:16:11] -rw-r--r-- 1 boincer umatlas     20841 Jun  3 12:16 stderr.txt
[2025-06-03 12:16:11] HITS file was successfully produced:
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas 183029663 Jun  3 12:15 shared/HITS.pool.root.1
[2025-06-03 12:16:11]  *** Contents of shared directory: ***
[2025-06-03 12:16:11] total 390184
[2025-06-03 12:16:11] -rw-r--r-- 2 boincer umatlas 214612025 Jun  3 09:12 ATLAS.root_0
[2025-06-03 12:16:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 09:12 start_atlas.sh
[2025-06-03 12:16:11] -rw-r--r-- 2 boincer umatlas    508882 Jun  3 09:12 input.tar.gz
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas 183029663 Jun  3 12:15 HITS.pool.root.1
[2025-06-03 12:16:11] -rw------- 1 boincer umatlas   1372160 Jun  3 12:16 result.tar.gz
12:16:12 (595): run_atlas exited; CPU time 76187.329198
12:16:12 (595): called boinc_finish(0)

</stderr_txt>
]]>

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