Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:07:55 (770818): wrapper (7.7.26015): starting
09:07:55 (770818): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:07:55] Arguments: --nthreads 8
[2025-06-03 09:07:55] Threads: 8
[2025-06-03 09:07:55] Checking for CVMFS
[2025-06-03 09:07:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:07:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:07:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:07:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:07:55] 2.12.6.0 814677 89242 878436 146742 2 197 16857970 21551104 3232 16776704 1 292935324 99.328 535792945 27515 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 09:07:55] CVMFS is ok
[2025-06-03 09:07:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:07:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:07:55] Further information can be found at the LHC@home message board.
[2025-06-03 09:07:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:07:55] Checking for apptainer binary...
[2025-06-03 09:07:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:07:55] Running /usr/bin/apptainer --version
[2025-06-03 09:07:55] apptainer version 1.4.1-1.el9
[2025-06-03 09:07:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:07:55] c-16-30.aglt2.org
[2025-06-03 09:07:55] apptainer works
[2025-06-03 09:07:55] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:07:55] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:07:55] Starting ATLAS job with PandaID=6677577853
[2025-06-03 09:07:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:52:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:52:11] 2025-06-03 15:51:52,695 | INFO     | mean x: 1748960839.5
[2025-06-03 11:52:11] 2025-06-03 15:51:52,695 | INFO     | mean y: 2078103.2371794872
[2025-06-03 11:52:11] 2025-06-03 15:51:52,695 | INFO     | -- intersect: -90779985332.51839
[2025-06-03 11:52:11] 2025-06-03 15:51:52,696 | INFO     | intersect: -90779985332.51839
[2025-06-03 11:52:11] 2025-06-03 15:51:52,696 | INFO     | chi2: 4.045375047522021
[2025-06-03 11:52:11] 2025-06-03 15:51:52,696 | INFO     | current chi2=4.045375047522021 (change=1.4740605191309795 %)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,696 | INFO     | right removable region: 155
[2025-06-03 11:52:11] 2025-06-03 15:51:52,697 | INFO     | sum of square deviations: 1177156955.0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,698 | INFO     | sum of deviations: 25057926114.0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,698 | INFO     | mean x: 1748961144.5
[2025-06-03 11:52:11] 2025-06-03 15:51:52,698 | INFO     | mean y: 2122909.846153846
[2025-06-03 11:52:11] 2025-06-03 15:51:52,699 | INFO     | -- intersect: -37227695041.77771
[2025-06-03 11:52:11] 2025-06-03 15:51:52,699 | INFO     | intersect: -37227695041.77771
[2025-06-03 11:52:11] 2025-06-03 15:51:52,699 | INFO     | chi2: 1.414891500069843
[2025-06-03 11:52:11] 2025-06-03 15:51:52,700 | INFO     | current chi2=1.414891500069843 (change=65.54002714945591 %)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,700 | INFO     | sum of square deviations: 1067554900.0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,701 | INFO     | sum of deviations: 575646507.9999995
[2025-06-03 11:52:11] 2025-06-03 15:51:52,701 | INFO     | mean x: 1748961297.0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,702 | INFO     | mean y: 2156906.6490066224
[2025-06-03 11:52:11] 2025-06-03 15:51:52,702 | INFO     | -- intersect: -940917274.5900098
[2025-06-03 11:52:11] 2025-06-03 15:51:52,702 | INFO     | intersect: -940917274.5900098
[2025-06-03 11:52:11] 2025-06-03 15:51:52,702 | INFO     | chi2: 0.1796564143449253
[2025-06-03 11:52:11] 2025-06-03 15:51:52,703 | INFO     | current chi2=0.1796564143449253 (change=87.30245998820003 %)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,703 | INFO     | sum of square deviations: 964976232.5
[2025-06-03 11:52:11] 2025-06-03 15:51:52,704 | INFO     | sum of deviations: -4426871137.999999
[2025-06-03 11:52:11] 2025-06-03 15:51:52,704 | INFO     | mean x: 1748961449.5
[2025-06-03 11:52:11] 2025-06-03 15:51:52,705 | INFO     | mean y: 2164237.3698630137
[2025-06-03 11:52:11] 2025-06-03 15:51:52,705 | INFO     | -- intersect: 8025602226.311411
[2025-06-03 11:52:11] 2025-06-03 15:51:52,705 | INFO     | intersect: 8025602226.311411
[2025-06-03 11:52:11] 2025-06-03 15:51:52,705 | INFO     | chi2: 0.09286584079976518
[2025-06-03 11:52:11] 2025-06-03 15:51:52,706 | INFO     | current chi2=0.09286584079976518 (change=48.3091983448637 %)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,706 | INFO     | sum of square deviations: 869188390.0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,707 | INFO     | sum of deviations: -4056567954.000001
[2025-06-03 11:52:11] 2025-06-03 15:51:52,707 | INFO     | mean x: 1748961602.0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,708 | INFO     | mean y: 2163638.829787234
[2025-06-03 11:52:11] 2025-06-03 15:51:52,708 | INFO     | size of work directory /var/lib/condor/boinchome/slots/4/PanDA_Pilot-6677577853: 3387973 B (within 2537553920 B limit)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,708 | INFO     | -- intersect: 8164699711.647906
[2025-06-03 11:52:11] 2025-06-03 15:51:52,708 | INFO     | intersect: 8164699711.647906
[2025-06-03 11:52:11] 2025-06-03 15:51:52,709 | INFO     | pfn file=/var/lib/condor/boinchome/slots/4/PanDA_Pilot-6677577853/HITS.45006595._029231.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,709 | INFO     | chi2: 0.09177032418146765
[2025-06-03 11:52:11] 2025-06-03 15:51:52,709 | INFO     | total size of present files: 0 B (workdir size: 3387973 B)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,709 | INFO     | current chi2=0.09177032418146765 (change=1.179676626909191 %)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,710 | INFO     | output file size check: skipping output file /var/lib/condor/boinchome/slots/4/PanDA_Pilot-6677577853/HITS.45006595._029231.pool.root.1 since it does not exist
[2025-06-03 11:52:11] 2025-06-03 15:51:52,710 | INFO     | left removable region: 40
[2025-06-03 11:52:11] 2025-06-03 15:51:52,710 | INFO     | sum of square deviations: 471562330.0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,711 | INFO     | sum of deviations: -46587957.00000003
[2025-06-03 11:52:11] 2025-06-03 15:51:52,712 | INFO     | mean x: 1748962029.0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,712 | INFO     | mean y: 2165829.304347826
[2025-06-03 11:52:11] 2025-06-03 15:51:52,712 | INFO     | -- intersect: 174954372.02294198
[2025-06-03 11:52:11] 2025-06-03 15:51:52,712 | INFO     | intersect: 174954372.02294198
[2025-06-03 11:52:11] 2025-06-03 15:51:52,713 | INFO     | chi2: 0.04318647892195779
[2025-06-03 11:52:11] 2025-06-03 15:51:52,713 | INFO     | -- intersect: 174954372.02294198
[2025-06-03 11:52:11] 2025-06-03 15:51:52,713 | INFO     | current memory leak: -0.10 B/s (using 115 data points, chi2=0.04)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,714 | INFO     | ..............................
[2025-06-03 11:52:11] 2025-06-03 15:51:52,714 | INFO     | . Timing measurements:
[2025-06-03 11:52:11] 2025-06-03 15:51:52,714 | INFO     | . get job = 0 s
[2025-06-03 11:52:11] 2025-06-03 15:51:52,714 | INFO     | . initial setup = 2 s
[2025-06-03 11:52:11] 2025-06-03 15:51:52,715 | INFO     | . payload setup = 6 s
[2025-06-03 11:52:11] 2025-06-03 15:51:52,715 | INFO     | . stage-in = 0 s
[2025-06-03 11:52:11] 2025-06-03 15:51:52,715 | INFO     | . payload execution = 9793 s
[2025-06-03 11:52:11] 2025-06-03 15:51:52,715 | INFO     | . stage-out = 1 s
[2025-06-03 11:52:11] 2025-06-03 15:51:52,715 | INFO     | . log creation = 0 s
[2025-06-03 11:52:11] 2025-06-03 15:51:52,716 | INFO     | ..............................
[2025-06-03 11:52:11] 2025-06-03 15:51:52,904 | INFO     | 
[2025-06-03 11:52:11] 2025-06-03 15:51:52,905 | INFO     | job summary report
[2025-06-03 11:52:11] 2025-06-03 15:51:52,905 | INFO     | --------------------------------------------------
[2025-06-03 11:52:11] 2025-06-03 15:51:52,905 | INFO     | PanDA job id: 6677577853
[2025-06-03 11:52:11] 2025-06-03 15:51:52,905 | INFO     | task id: 45006595
[2025-06-03 11:52:11] 2025-06-03 15:51:52,906 | INFO     | errors: (none)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,906 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:52:11] 2025-06-03 15:51:52,906 | INFO     | pilot state: finished 
[2025-06-03 11:52:11] 2025-06-03 15:51:52,907 | INFO     | transexitcode: 0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,907 | INFO     | exeerrorcode: 0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,907 | INFO     | exeerrordiag: 
[2025-06-03 11:52:11] 2025-06-03 15:51:52,907 | INFO     | exitcode: 0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,907 | INFO     | exitmsg: OK
[2025-06-03 11:52:11] 2025-06-03 15:51:52,908 | INFO     | cpuconsumptiontime: 65912 s
[2025-06-03 11:52:11] 2025-06-03 15:51:52,908 | INFO     | nevents: 400
[2025-06-03 11:52:11] 2025-06-03 15:51:52,908 | INFO     | neventsw: 0
[2025-06-03 11:52:11] 2025-06-03 15:51:52,908 | INFO     | pid: 794360
[2025-06-03 11:52:11] 2025-06-03 15:51:52,909 | INFO     | pgrp: 794360
[2025-06-03 11:52:11] 2025-06-03 15:51:52,909 | INFO     | corecount: 8
[2025-06-03 11:52:11] 2025-06-03 15:51:52,909 | INFO     | event service: False
[2025-06-03 11:52:11] 2025-06-03 15:51:52,909 | INFO     | sizes: {0: 2405024, 1: 2405223, 5: 2405429, 11: 2405485, 9804: 2433801, 9805: 2442764, 9807: 2442948, 9812: 2443146}
[2025-06-03 11:52:11] 2025-06-03 15:51:52,910 | INFO     | --------------------------------------------------
[2025-06-03 11:52:11] 2025-06-03 15:51:52,910 | INFO     | 
[2025-06-03 11:52:11] 2025-06-03 15:51:52,910 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/4
[2025-06-03 11:52:11] 2025-06-03 15:51:52,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,930 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,930 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,930 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,932 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,933 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,933 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,934 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,934 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:52:11] 2025-06-03 15:51:52,934 | INFO     | job 6677577853 has completed (purged errors)
[2025-06-03 11:52:11] 2025-06-03 15:51:52,934 | INFO     | overall cleanup function is called
[2025-06-03 11:52:11] 2025-06-03 15:51:53,278 | INFO     | number of running child processes to parent process 794360: 1
[2025-06-03 11:52:11] 2025-06-03 15:51:53,278 | INFO     | maximum number of monitored processes: 6
[2025-06-03 11:52:11] 2025-06-03 15:51:53,279 | INFO     | aborting job monitoring since job object (job id=6677577853) has expired
[2025-06-03 11:52:11] 2025-06-03 15:51:53,944 | INFO     | --- collectZombieJob: --- 10, [794360]
[2025-06-03 11:52:11] 2025-06-03 15:51:53,944 | INFO     | zombie collector waiting for pid 794360
[2025-06-03 11:52:11] 2025-06-03 15:51:53,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:52:11] 2025-06-03 15:51:53,944 | INFO     | collected zombie processes
[2025-06-03 11:52:11] 2025-06-03 15:51:53,945 | INFO     | will attempt to kill all subprocesses of pid=794360
[2025-06-03 11:52:11] 2025-06-03 15:51:54,294 | INFO     | process IDs to be killed: [794360] (in reverse order)
[2025-06-03 11:52:11] 2025-06-03 15:51:54,382 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:52:11] 2025-06-03 15:51:54,383 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:52:11] 2025-06-03 15:51:54,398 | INFO     | did not find any defunct processes belonging to 794360
[2025-06-03 11:52:11] 2025-06-03 15:51:54,412 | INFO     | did not find any defunct processes belonging to 794360
[2025-06-03 11:52:11] 2025-06-03 15:51:54,412 | INFO     | ready for new job
[2025-06-03 11:52:11] 2025-06-03 15:51:54,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:52:11] 2025-06-03 15:51:54,415 | INFO     | **************************************
[2025-06-03 11:52:11] 2025-06-03 15:51:54,415 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:52:11] 2025-06-03 15:51:54,415 | INFO     | **************************************
[2025-06-03 11:52:11] 2025-06-03 15:51:54,415 | INFO     | 
[2025-06-03 11:52:11] 2025-06-03 15:51:54,417 | INFO     | architecture information:
[2025-06-03 11:52:11] 2025-06-03 15:51:54,418 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:52:11] 2025-06-03 15:51:54,430 | INFO     | cat /etc/os-release:
[2025-06-03 11:52:11] NAME="CentOS Linux"
[2025-06-03 11:52:11] VERSION="7 (Core)"
[2025-06-03 11:52:11] ID="centos"
[2025-06-03 11:52:11] ID_LIKE="rhel fedora"
[2025-06-03 11:52:11] VERSION_ID="7"
[2025-06-03 11:52:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:52:11] ANSI_COLOR="0;31"
[2025-06-03 11:52:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:52:11] HOME_URL="https://www.centos.org/"
[2025-06-03 11:52:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:52:11] 
[2025-06-03 11:52:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:52:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:52:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:52:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:52:11] 
[2025-06-03 11:52:11] 2025-06-03 15:51:54,431 | INFO     | **************************************
[2025-06-03 11:52:11] 2025-06-03 15:51:54,933 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/4
[2025-06-03 11:52:11] 2025-06-03 15:51:54,946 | INFO     | sufficient remaining disk space (1861991006208 B)
[2025-06-03 11:52:11] 2025-06-03 15:51:54,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:52:11] 2025-06-03 15:51:54,947 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:52:11] 2025-06-03 15:51:54,947 | INFO     | update_server=False
[2025-06-03 11:52:11] 2025-06-03 15:51:54,948 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:52:11] 2025-06-03 15:51:54,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:52:11] 2025-06-03 15:51:54,948 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 11:52:11] 2025-06-03 15:51:54,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:52:11] 2025-06-03 15:51:54,948 | INFO     | aborting loop
[2025-06-03 11:52:11] 2025-06-03 15:51:54,949 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:52:11] 2025-06-03 15:51:54,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:52:11] 2025-06-03 15:51:54,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:52:11] 2025-06-03 15:51:55,953 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:55,955 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:55,997 | INFO     | all payload control threads have been joined
[2025-06-03 11:52:11] 2025-06-03 15:51:56,044 | INFO     | all data control threads have been joined
[2025-06-03 11:52:11] 2025-06-03 15:51:56,476 | INFO     | all job control threads have been joined
[2025-06-03 11:52:11] 2025-06-03 15:51:56,608 | INFO     | [job] validate thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:56,644 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:56,738 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:56,748 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:56,955 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:57,003 | INFO     | [payload] control thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:57,050 | INFO     | [data] control thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:57,312 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:57,335 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:57,482 | INFO     | [job] control thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:57,509 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:51:57,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:52:11] 2025-06-03 15:51:58,271 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:52:11] 2025-06-03 15:51:58,916 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:52:02,278 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:52:05,185 | INFO     | job.realtimelogging is not enabled
[2025-06-03 11:52:11] 2025-06-03 15:52:06,189 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:52:11] 2025-06-03 15:52:06,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140635328530240)>', '<ExcThread(monitor, started 140634962761472)>']
[2025-06-03 11:52:11] 2025-06-03 15:52:06,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:52:11] 2025-06-03 15:52:06,996 | INFO     | [monitor] control thread has ended
[2025-06-03 11:52:11] 2025-06-03 15:52:11,309 | INFO     | all workflow threads have been joined
[2025-06-03 11:52:11] 2025-06-03 15:52:11,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:52:11] 2025-06-03 15:52:11,309 | INFO     | traces error code: 0
[2025-06-03 11:52:11] 2025-06-03 15:52:11,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:52:11] 2025-06-03 15:52:11,429 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:52:11] 2025-06-03 15:52:11,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:52:11] 2025-06-03 15:52:11,434 [wrapper] pilotpid: 775776
[2025-06-03 11:52:11] 2025-06-03 15:52:11,436 [wrapper] Pilot exit status: 0
[2025-06-03 11:52:11] 2025-06-03 15:52:11,444 [wrapper] pandaids: 6677577853
[2025-06-03 11:52:11] 2025-06-03 15:52:11,506 [wrapper] cleanup supervisor_pilot 1153727 775777
[2025-06-03 11:52:11] 2025-06-03 15:52:11,508 [wrapper] Test setup, not cleaning
[2025-06-03 11:52:11] 2025-06-03 15:52:11,510 [wrapper] apfmon messages muted
[2025-06-03 11:52:11] 2025-06-03 15:52:11,512 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:52:11] 2025-06-03 15:52:11,514 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:52:11]  *** Error codes and diagnostics ***
[2025-06-03 11:52:11]     "exeErrorCode": 0,
[2025-06-03 11:52:11]     "exeErrorDiag": "",
[2025-06-03 11:52:11]     "pilotErrorCode": 0,
[2025-06-03 11:52:11]     "pilotErrorDiag": "",
[2025-06-03 11:52:11]  *** Listing of results directory ***
[2025-06-03 11:52:11] total 397200
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 06:30 pilot3.tar.gz
[2025-06-03 11:52:11] -rwx------. 1 boincer umatlas     37140 Jun  3 06:39 runpilot2-wrapper.sh
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 06:39 queuedata.json
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas       100 Jun  3 09:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:52:11] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 09:07 run_atlas
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas       105 Jun  3 09:07 job.xml
[2025-06-03 11:52:11] -rw-r--r--. 2 boincer umatlas 216224284 Jun  3 09:07 EVNT.45006593._001169.pool.root.1
[2025-06-03 11:52:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:07 start_atlas.sh
[2025-06-03 11:52:11] drwxrwx--x. 2 boincer umatlas        68 Jun  3 09:07 shared
[2025-06-03 11:52:11] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 09:07 input.tar.gz
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas         0 Jun  3 09:07 boinc_lockfile
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 09:07 pandaJob.out
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas    982724 Jun  3 09:08 agis_schedconf.cvmfs.json
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas   1603667 Jun  3 09:08 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:52:11] drwx------. 4 boincer umatlas      4096 Jun  3 09:08 pilot3
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas      6549 Jun  3 11:47 init_data.xml
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas       530 Jun  3 11:51 boinc_task_state.xml
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas 184136895 Jun  3 11:51 HITS.45006595._029231.pool.root.1
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas      1033 Jun  3 11:51 memory_monitor_summary.json
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas        95 Jun  3 11:51 pilot_heartbeat.json
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas    348401 Jun  3 11:51 log.45006595._029231.job.log.tgz.1
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas      7701 Jun  3 11:51 heartbeat.json
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas        27 Jun  3 11:52 wrapper_checkpoint.txt
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 11:52 boinc_mmap_file
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas      4561 Jun  3 11:52 pilotlog.txt
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas    922890 Jun  3 11:52 log.45006595._029231.job.log.1
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas       357 Jun  3 11:52 output.list
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas       620 Jun  3 11:52 runtime_log
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas   1290240 Jun  3 11:52 result.tar.gz
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas       652 Jun  3 11:52 XM9LDmaEeg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2KYKDmpZjjOo.diag
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas      8808 Jun  3 11:52 runtime_log.err
[2025-06-03 11:52:11] -rw-r--r--. 1 boincer umatlas     21235 Jun  3 11:52 stderr.txt
[2025-06-03 11:52:11] HITS file was successfully produced:
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas 184136895 Jun  3 11:51 shared/HITS.pool.root.1
[2025-06-03 11:52:11]  *** Contents of shared directory: ***
[2025-06-03 11:52:11] total 392764
[2025-06-03 11:52:11] -rw-r--r--. 2 boincer umatlas 216224284 Jun  3 09:07 ATLAS.root_0
[2025-06-03 11:52:11] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:07 start_atlas.sh
[2025-06-03 11:52:11] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 09:07 input.tar.gz
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas 184136895 Jun  3 11:51 HITS.pool.root.1
[2025-06-03 11:52:11] -rw-------. 1 boincer umatlas   1290240 Jun  3 11:52 result.tar.gz
11:52:13 (770818): run_atlas exited; CPU time 66304.935020
11:52:13 (770818): called boinc_finish(0)

</stderr_txt>
]]>

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