Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:07:49 (767454): wrapper (7.7.26015): starting
09:07:49 (767454): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 09:07:49] Arguments: --nthreads 8
[2025-06-03 09:07:49] Threads: 8
[2025-06-03 09:07:49] Checking for CVMFS
[2025-06-03 09:07:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 09:07:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 09:07:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 09:07:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 09:07:49] 2.12.6.0 814677 89242 878468 146742 2 197 16857970 21551104 3168 16776704 1 292927757 99.328 535792945 27515 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 09:07:49] CVMFS is ok
[2025-06-03 09:07:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 09:07:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 09:07:49] Further information can be found at the LHC@home message board.
[2025-06-03 09:07:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 09:07:49] Checking for apptainer binary...
[2025-06-03 09:07:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 09:07:49] Running /usr/bin/apptainer --version
[2025-06-03 09:07:49] apptainer version 1.4.1-1.el9
[2025-06-03 09:07:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 09:07:49] c-16-30.aglt2.org
[2025-06-03 09:07:49] apptainer works
[2025-06-03 09:07:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 09:07:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 09:07:49] Starting ATLAS job with PandaID=6677577222
[2025-06-03 09:07:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:51:43]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:51:43] 2025-06-03 15:51:11,186 | INFO     | mean x: 1748960956.5
[2025-06-03 11:51:43] 2025-06-03 15:51:11,186 | INFO     | mean y: 2058442.2375
[2025-06-03 11:51:43] 2025-06-03 15:51:11,187 | INFO     | -- intersect: -69630917569.01903
[2025-06-03 11:51:43] 2025-06-03 15:51:11,187 | INFO     | intersect: -69630917569.01903
[2025-06-03 11:51:43] 2025-06-03 15:51:11,187 | INFO     | chi2: 4.398487271635944
[2025-06-03 11:51:43] 2025-06-03 15:51:11,188 | INFO     | sum of square deviations: 1154663510.0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,189 | INFO     | sum of deviations: 56452615371.0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,189 | INFO     | mean x: 1748960804.0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,189 | INFO     | mean y: 2066140.2516129033
[2025-06-03 11:51:43] 2025-06-03 15:51:11,189 | INFO     | -- intersect: -85506318520.80597
[2025-06-03 11:51:43] 2025-06-03 15:51:11,189 | INFO     | intersect: -85506318520.80597
[2025-06-03 11:51:43] 2025-06-03 15:51:11,190 | INFO     | chi2: 4.226012890339694
[2025-06-03 11:51:43] 2025-06-03 15:51:11,190 | INFO     | current chi2=4.226012890339694 (change=3.9212204252236234 %)
[2025-06-03 11:51:43] 2025-06-03 15:51:11,190 | INFO     | right removable region: 154
[2025-06-03 11:51:43] 2025-06-03 15:51:11,191 | INFO     | sum of square deviations: 1154663510.0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,192 | INFO     | sum of deviations: 15472039389.999992
[2025-06-03 11:51:43] 2025-06-03 15:51:11,192 | INFO     | mean x: 1748961109.0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,192 | INFO     | mean y: 2104685.851612903
[2025-06-03 11:51:43] 2025-06-03 15:51:11,192 | INFO     | -- intersect: -23433290072.597168
[2025-06-03 11:51:43] 2025-06-03 15:51:11,192 | INFO     | intersect: -23433290072.597168
[2025-06-03 11:51:43] 2025-06-03 15:51:11,193 | INFO     | chi2: 1.5919771856947569
[2025-06-03 11:51:43] 2025-06-03 15:51:11,193 | INFO     | current chi2=1.5919771856947569 (change=63.80625684742183 %)
[2025-06-03 11:51:43] 2025-06-03 15:51:11,193 | INFO     | sum of square deviations: 1046484737.5
[2025-06-03 11:51:43] 2025-06-03 15:51:11,194 | INFO     | sum of deviations: -8558628484.999998
[2025-06-03 11:51:43] 2025-06-03 15:51:11,194 | INFO     | mean x: 1748961261.5
[2025-06-03 11:51:43] 2025-06-03 15:51:11,194 | INFO     | mean y: 2138490.2666666666
[2025-06-03 11:51:43] 2025-06-03 15:51:11,195 | INFO     | -- intersect: 14305939716.832985
[2025-06-03 11:51:43] 2025-06-03 15:51:11,195 | INFO     | intersect: 14305939716.832985
[2025-06-03 11:51:43] 2025-06-03 15:51:11,195 | INFO     | chi2: 0.31322520028209144
[2025-06-03 11:51:43] 2025-06-03 15:51:11,195 | INFO     | current chi2=0.31322520028209144 (change=80.32476827578428 %)
[2025-06-03 11:51:43] 2025-06-03 15:51:11,196 | INFO     | sum of square deviations: 945282840.0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,197 | INFO     | sum of deviations: -13205465074.0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,197 | INFO     | mean x: 1748961414.0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,197 | INFO     | mean y: 2145397.855172414
[2025-06-03 11:51:43] 2025-06-03 15:51:11,197 | INFO     | -- intersect: 24434884352.844193
[2025-06-03 11:51:43] 2025-06-03 15:51:11,197 | INFO     | intersect: 24434884352.844193
[2025-06-03 11:51:43] 2025-06-03 15:51:11,198 | INFO     | chi2: 0.21980609513110344
[2025-06-03 11:51:43] 2025-06-03 15:51:11,198 | INFO     | current chi2=0.21980609513110344 (change=29.824900763685203 %)
[2025-06-03 11:51:43] 2025-06-03 15:51:11,198 | INFO     | sum of square deviations: 850825255.0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,199 | INFO     | sum of deviations: -12525086964.5
[2025-06-03 11:51:43] 2025-06-03 15:51:11,199 | INFO     | mean x: 1748961566.5
[2025-06-03 11:51:43] 2025-06-03 15:51:11,200 | INFO     | mean y: 2144286.0214285715
[2025-06-03 11:51:43] 2025-06-03 15:51:11,200 | INFO     | -- intersect: 25748789192.5371
[2025-06-03 11:51:43] 2025-06-03 15:51:11,200 | INFO     | intersect: 25748789192.5371
[2025-06-03 11:51:43] 2025-06-03 15:51:11,200 | INFO     | chi2: 0.21823540991558715
[2025-06-03 11:51:43] 2025-06-03 15:51:11,200 | INFO     | current chi2=0.21823540991558715 (change=0.7145776437998462 %)
[2025-06-03 11:51:43] 2025-06-03 15:51:11,201 | INFO     | left removable region: 40
[2025-06-03 11:51:43] 2025-06-03 15:51:11,201 | INFO     | sum of square deviations: 459366752.5
[2025-06-03 11:51:43] 2025-06-03 15:51:11,202 | INFO     | sum of deviations: -1323479759.5
[2025-06-03 11:51:43] 2025-06-03 15:51:11,202 | INFO     | mean x: 1748961993.5
[2025-06-03 11:51:43] 2025-06-03 15:51:11,202 | INFO     | mean y: 2148215.535087719
[2025-06-03 11:51:43] 2025-06-03 15:51:11,202 | INFO     | -- intersect: 5041075795.588937
[2025-06-03 11:51:43] 2025-06-03 15:51:11,202 | INFO     | intersect: 5041075795.588937
[2025-06-03 11:51:43] 2025-06-03 15:51:11,203 | INFO     | chi2: 0.0795792410123495
[2025-06-03 11:51:43] 2025-06-03 15:51:11,203 | INFO     | -- intersect: 5041075795.588937
[2025-06-03 11:51:43] 2025-06-03 15:51:11,203 | INFO     | current memory leak: -2.88 B/s (using 114 data points, chi2=0.08)
[2025-06-03 11:51:43] 2025-06-03 15:51:11,204 | INFO     | ..............................
[2025-06-03 11:51:43] 2025-06-03 15:51:11,204 | INFO     | . Timing measurements:
[2025-06-03 11:51:43] 2025-06-03 15:51:11,204 | INFO     | . get job = 0 s
[2025-06-03 11:51:43] 2025-06-03 15:51:11,204 | INFO     | . initial setup = 2 s
[2025-06-03 11:51:43] 2025-06-03 15:51:11,204 | INFO     | . payload setup = 6 s
[2025-06-03 11:51:43] 2025-06-03 15:51:11,205 | INFO     | . stage-in = 0 s
[2025-06-03 11:51:43] 2025-06-03 15:51:11,205 | INFO     | . payload execution = 9755 s
[2025-06-03 11:51:43] 2025-06-03 15:51:11,205 | INFO     | . stage-out = 1 s
[2025-06-03 11:51:43] 2025-06-03 15:51:11,205 | INFO     | . log creation = 0 s
[2025-06-03 11:51:43] 2025-06-03 15:51:11,205 | INFO     | ..............................
[2025-06-03 11:51:43] 2025-06-03 15:51:11,362 | INFO     | 
[2025-06-03 11:51:43] 2025-06-03 15:51:11,362 | INFO     | job summary report
[2025-06-03 11:51:43] 2025-06-03 15:51:11,362 | INFO     | --------------------------------------------------
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | PanDA job id: 6677577222
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | task id: 45006595
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | errors: (none)
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | pilot state: finished 
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | transexitcode: 0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | exeerrorcode: 0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | exeerrordiag: 
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | exitcode: 0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | exitmsg: OK
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | cpuconsumptiontime: 64361 s
[2025-06-03 11:51:43] 2025-06-03 15:51:11,363 | INFO     | nevents: 400
[2025-06-03 11:51:43] 2025-06-03 15:51:11,364 | INFO     | neventsw: 0
[2025-06-03 11:51:43] 2025-06-03 15:51:11,364 | INFO     | pid: 787158
[2025-06-03 11:51:43] 2025-06-03 15:51:11,364 | INFO     | pgrp: 787158
[2025-06-03 11:51:43] 2025-06-03 15:51:11,364 | INFO     | corecount: 8
[2025-06-03 11:51:43] 2025-06-03 15:51:11,364 | INFO     | event service: False
[2025-06-03 11:51:43] 2025-06-03 15:51:11,364 | INFO     | sizes: {0: 2404356, 1: 2405223, 2: 2405223, 5: 2405457, 12: 2405513, 9766: 2433813, 9768: 2442776, 9770: 2442832, 9775: 2443002}
[2025-06-03 11:51:43] 2025-06-03 15:51:11,364 | INFO     | --------------------------------------------------
[2025-06-03 11:51:43] 2025-06-03 15:51:11,364 | INFO     | 
[2025-06-03 11:51:43] 2025-06-03 15:51:11,364 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/2
[2025-06-03 11:51:43] 2025-06-03 15:51:11,377 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,377 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,377 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,377 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,377 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,378 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:51:43] 2025-06-03 15:51:11,379 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,379 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:51:43] 2025-06-03 15:51:11,379 | INFO     | job 6677577222 has completed (purged errors)
[2025-06-03 11:51:43] 2025-06-03 15:51:11,379 | INFO     | overall cleanup function is called
[2025-06-03 11:51:43] 2025-06-03 15:51:12,386 | INFO     | --- collectZombieJob: --- 10, [787158]
[2025-06-03 11:51:43] 2025-06-03 15:51:12,386 | INFO     | zombie collector waiting for pid 787158
[2025-06-03 11:51:43] 2025-06-03 15:51:12,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:51:43] 2025-06-03 15:51:12,386 | INFO     | collected zombie processes
[2025-06-03 11:51:43] 2025-06-03 15:51:12,387 | INFO     | will attempt to kill all subprocesses of pid=787158
[2025-06-03 11:51:43] 2025-06-03 15:51:12,754 | INFO     | process IDs to be killed: [787158] (in reverse order)
[2025-06-03 11:51:43] 2025-06-03 15:51:12,846 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:51:43] 2025-06-03 15:51:12,846 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:51:43] 2025-06-03 15:51:12,862 | INFO     | did not find any defunct processes belonging to 787158
[2025-06-03 11:51:43] 2025-06-03 15:51:12,877 | INFO     | did not find any defunct processes belonging to 787158
[2025-06-03 11:51:43] 2025-06-03 15:51:12,877 | INFO     | ready for new job
[2025-06-03 11:51:43] 2025-06-03 15:51:12,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:51:43] 2025-06-03 15:51:12,880 | INFO     | **************************************
[2025-06-03 11:51:43] 2025-06-03 15:51:12,880 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:51:43] 2025-06-03 15:51:12,880 | INFO     | **************************************
[2025-06-03 11:51:43] 2025-06-03 15:51:12,880 | INFO     | 
[2025-06-03 11:51:43] 2025-06-03 15:51:12,894 | INFO     | architecture information:
[2025-06-03 11:51:43] 2025-06-03 15:51:12,895 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:51:43] 2025-06-03 15:51:12,907 | INFO     | cat /etc/os-release:
[2025-06-03 11:51:43] NAME="CentOS Linux"
[2025-06-03 11:51:43] VERSION="7 (Core)"
[2025-06-03 11:51:43] ID="centos"
[2025-06-03 11:51:43] ID_LIKE="rhel fedora"
[2025-06-03 11:51:43] VERSION_ID="7"
[2025-06-03 11:51:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:51:43] ANSI_COLOR="0;31"
[2025-06-03 11:51:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:51:43] HOME_URL="https://www.centos.org/"
[2025-06-03 11:51:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:51:43] 
[2025-06-03 11:51:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:51:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:51:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:51:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:51:43] 
[2025-06-03 11:51:43] 2025-06-03 15:51:12,908 | INFO     | **************************************
[2025-06-03 11:51:43] 2025-06-03 15:51:13,409 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/2
[2025-06-03 11:51:43] 2025-06-03 15:51:13,423 | INFO     | sufficient remaining disk space (1861771853824 B)
[2025-06-03 11:51:43] 2025-06-03 15:51:13,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:51:43] 2025-06-03 15:51:13,424 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:51:43] 2025-06-03 15:51:13,425 | INFO     | update_server=False
[2025-06-03 11:51:43] 2025-06-03 15:51:13,425 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:51:43] 2025-06-03 15:51:13,604 | INFO     | all job control threads have been joined
[2025-06-03 11:51:43] 2025-06-03 15:51:13,850 | INFO     | PID=771930 has CPU usage=17.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 11:51:43] 2025-06-03 15:51:13,851 | INFO     | .. there are 7 such processes running
[2025-06-03 11:51:43] 2025-06-03 15:51:13,851 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:51:43] 2025-06-03 15:51:13,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:51:43] 2025-06-03 15:51:13,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:51:43] 2025-06-03 15:51:14,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:51:43] 2025-06-03 15:51:14,003 | INFO     | aborting loop
[2025-06-03 11:51:43] 2025-06-03 15:51:14,306 | INFO     | all payload control threads have been joined
[2025-06-03 11:51:43] 2025-06-03 15:51:14,348 | INFO     | all data control threads have been joined
[2025-06-03 11:51:43] 2025-06-03 15:51:14,431 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:14,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:51:43] 2025-06-03 15:51:14,542 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:14,609 | INFO     | [job] control thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:14,682 | INFO     | [job] validate thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:14,721 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:14,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:15,008 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:15,047 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:15,103 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:15,311 | INFO     | [payload] control thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:15,354 | INFO     | [data] control thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:15,450 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:15,750 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:16,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:51:43] 2025-06-03 15:51:16,466 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:16,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:51:43] 2025-06-03 15:51:17,377 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:20,701 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:51:43] 2025-06-03 15:51:22,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140272658229056)>', '<ExcThread(monitor, started 140272306460416)>']
[2025-06-03 11:51:43] 2025-06-03 15:51:22,891 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:51:43] 2025-06-03 15:51:22,892 | INFO     | [monitor] control thread has ended
[2025-06-03 11:51:43] 2025-06-03 15:51:27,092 | INFO     | all workflow threads have been joined
[2025-06-03 11:51:43] 2025-06-03 15:51:27,093 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:51:43] 2025-06-03 15:51:27,093 | INFO     | traces error code: 0
[2025-06-03 11:51:43] 2025-06-03 15:51:27,093 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:51:43] 2025-06-03 15:51:27,202 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:51:43] 2025-06-03 15:51:27,205 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:51:43] 2025-06-03 15:51:27,208 [wrapper] pilotpid: 771930
[2025-06-03 11:51:43] 2025-06-03 15:51:27,211 [wrapper] Pilot exit status: 0
[2025-06-03 11:51:43] 2025-06-03 15:51:27,220 [wrapper] pandaids: 6677577222
[2025-06-03 11:51:43] 2025-06-03 15:51:27,281 [wrapper] cleanup supervisor_pilot 1153707 771931
[2025-06-03 11:51:43] 2025-06-03 15:51:27,284 [wrapper] Test setup, not cleaning
[2025-06-03 11:51:43] 2025-06-03 15:51:27,287 [wrapper] apfmon messages muted
[2025-06-03 11:51:43] 2025-06-03 15:51:27,290 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:51:43] 2025-06-03 15:51:27,292 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:51:43]  *** Error codes and diagnostics ***
[2025-06-03 11:51:43]     "exeErrorCode": 0,
[2025-06-03 11:51:43]     "exeErrorDiag": "",
[2025-06-03 11:51:43]     "pilotErrorCode": 0,
[2025-06-03 11:51:43]     "pilotErrorDiag": "",
[2025-06-03 11:51:43]  *** Listing of results directory ***
[2025-06-03 11:51:43] total 391956
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 06:30 pilot3.tar.gz
[2025-06-03 11:51:43] -rwx------. 1 boincer umatlas     37140 Jun  3 06:31 runpilot2-wrapper.sh
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 06:31 queuedata.json
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas       100 Jun  3 09:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:51:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 09:07 run_atlas
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas       105 Jun  3 09:07 job.xml
[2025-06-03 11:51:43] -rw-r--r--. 2 boincer umatlas 216318068 Jun  3 09:07 EVNT.45006593._001160.pool.root.1
[2025-06-03 11:51:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:07 start_atlas.sh
[2025-06-03 11:51:43] drwxrwx--x. 2 boincer umatlas        68 Jun  3 09:07 shared
[2025-06-03 11:51:43] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 09:07 input.tar.gz
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas         0 Jun  3 09:07 boinc_lockfile
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 09:07 pandaJob.out
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas    982724 Jun  3 09:07 agis_schedconf.cvmfs.json
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas   1603667 Jun  3 09:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:51:43] drwx------. 4 boincer umatlas      4096 Jun  3 09:08 pilot3
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas      6549 Jun  3 11:47 init_data.xml
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas        95 Jun  3 11:50 pilot_heartbeat.json
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas 178651771 Jun  3 11:50 HITS.45006595._029019.pool.root.1
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas       530 Jun  3 11:50 boinc_task_state.xml
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas      1033 Jun  3 11:50 memory_monitor_summary.json
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas    363245 Jun  3 11:51 log.45006595._029019.job.log.tgz.1
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas      7702 Jun  3 11:51 heartbeat.json
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas        27 Jun  3 11:51 wrapper_checkpoint.txt
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas      4760 Jun  3 11:51 pilotlog.txt
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas    919451 Jun  3 11:51 log.45006595._029019.job.log.1
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas       357 Jun  3 11:51 output.list
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas       620 Jun  3 11:51 runtime_log
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas   1300480 Jun  3 11:51 result.tar.gz
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas      8808 Jun  3 11:51 runtime_log.err
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas       652 Jun  3 11:51 clkLDmb6dg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmeJYKDmgmWWWo.diag
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 11:51 boinc_mmap_file
[2025-06-03 11:51:43] -rw-r--r--. 1 boincer umatlas     20861 Jun  3 11:51 stderr.txt
[2025-06-03 11:51:43] HITS file was successfully produced:
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas 178651771 Jun  3 11:50 shared/HITS.pool.root.1
[2025-06-03 11:51:43]  *** Contents of shared directory: ***
[2025-06-03 11:51:43] total 387512
[2025-06-03 11:51:43] -rw-r--r--. 2 boincer umatlas 216318068 Jun  3 09:07 ATLAS.root_0
[2025-06-03 11:51:43] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 09:07 start_atlas.sh
[2025-06-03 11:51:43] -rw-r--r--. 2 boincer umatlas    508875 Jun  3 09:07 input.tar.gz
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas 178651771 Jun  3 11:50 HITS.pool.root.1
[2025-06-03 11:51:43] -rw-------. 1 boincer umatlas   1300480 Jun  3 11:51 result.tar.gz
11:51:45 (767454): run_atlas exited; CPU time 64756.555438
11:51:45 (767454): called boinc_finish(0)

</stderr_txt>
]]>

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