Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:07:03 (3926): wrapper (7.7.26015): starting
02:07:03 (3926): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:07:03] Arguments: --nthreads 8
[2025-06-04 02:07:03] Threads: 8
[2025-06-04 02:07:03] Checking for CVMFS
[2025-06-04 02:07:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:07:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:07:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:07:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:07:04] 2.11.2.0 896 32454 90748 146761 3 264 23419066 25165824 3790 130560 0 16240828 99.786 19457686 2372 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 02:07:04] CVMFS is ok
[2025-06-04 02:07:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:07:04] Checking for apptainer binary...
[2025-06-04 02:07:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:07:04] Running /usr/bin/apptainer --version
[2025-06-04 02:07:04] apptainer version 1.3.2-1.el7
[2025-06-04 02:07:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:07:05] cg-vwn277.simple-grid.lan
[2025-06-04 02:07:05] apptainer works
[2025-06-04 02:07:05] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:07:05] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:07:05] Starting ATLAS job with PandaID=6677553072
[2025-06-04 02:07:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 07:41:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 07:41:40] 2025-06-04 03:50:38,609 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 07:41:40] 2025-06-04 03:50:38,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 07:41:40] 2025-06-04 03:50:38,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 07:41:40] 2025-06-04 03:50:38,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 07:41:40] 2025-06-04 03:50:38,615 | INFO     | fitting pss+swap vs Time
[2025-06-04 07:41:40] 2025-06-04 03:50:38,616 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 07:41:40] 2025-06-04 03:50:38,618 | INFO     | sum of deviations: 17825737016.999996
[2025-06-04 07:41:40] 2025-06-04 03:50:38,618 | INFO     | mean x: 1749002315.0
[2025-06-04 07:41:40] 2025-06-04 03:50:38,618 | INFO     | mean y: 2459070.728110599
[2025-06-04 07:41:40] 2025-06-04 03:50:38,618 | INFO     | -- intersect: -9837413558.989698
[2025-06-04 07:41:40] 2025-06-04 03:50:38,618 | INFO     | intersect: -9837413558.989698
[2025-06-04 07:41:40] 2025-06-04 03:50:38,619 | INFO     | chi2: 2.533541704402432
[2025-06-04 07:41:40] 2025-06-04 03:50:38,619 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 07:41:40] 2025-06-04 03:50:38,621 | INFO     | sum of deviations: 31535573484.49999
[2025-06-04 07:41:40] 2025-06-04 03:50:38,621 | INFO     | mean x: 1749002162.5
[2025-06-04 07:41:40] 2025-06-04 03:50:38,622 | INFO     | mean y: 2468649.787735849
[2025-06-04 07:41:40] 2025-06-04 03:50:38,622 | INFO     | -- intersect: -18666259687.11255
[2025-06-04 07:41:40] 2025-06-04 03:50:38,622 | INFO     | intersect: -18666259687.11255
[2025-06-04 07:41:40] 2025-06-04 03:50:38,622 | INFO     | chi2: 1.7640389953491338
[2025-06-04 07:41:40] 2025-06-04 03:50:38,622 | INFO     | current chi2=1.7640389953491338 (change=30.372608736464247 %)
[2025-06-04 07:41:40] 2025-06-04 03:50:38,623 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 07:41:40] 2025-06-04 03:50:38,630 | INFO     | sum of deviations: 30708649767.999996
[2025-06-04 07:41:40] 2025-06-04 03:50:38,630 | INFO     | mean x: 1749002010.0
[2025-06-04 07:41:40] 2025-06-04 03:50:38,630 | INFO     | mean y: 2468031.9903381644
[2025-06-04 07:41:40] 2025-06-04 03:50:38,630 | INFO     | -- intersect: -19526158731.456318
[2025-06-04 07:41:40] 2025-06-04 03:50:38,631 | INFO     | intersect: -19526158731.456318
[2025-06-04 07:41:40] 2025-06-04 03:50:38,631 | INFO     | chi2: 1.765288177627682
[2025-06-04 07:41:40] 2025-06-04 03:50:38,631 | INFO     | current chi2=1.765288177627682 (change=-0.07081375648961072 %)
[2025-06-04 07:41:40] 2025-06-04 03:50:38,631 | INFO     | right removable region: 206
[2025-06-04 07:41:40] 2025-06-04 03:50:38,632 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 07:41:40] 2025-06-04 03:50:38,634 | INFO     | sum of deviations: -20448725732.000004
[2025-06-04 07:41:40] 2025-06-04 03:50:38,634 | INFO     | mean x: 1749002467.5
[2025-06-04 07:41:40] 2025-06-04 03:50:38,634 | INFO     | mean y: 2486111.245283019
[2025-06-04 07:41:40] 2025-06-04 03:50:38,634 | INFO     | -- intersect: 12107919116.48149
[2025-06-04 07:41:40] 2025-06-04 03:50:38,635 | INFO     | intersect: 12107919116.48149
[2025-06-04 07:41:40] 2025-06-04 03:50:38,635 | INFO     | chi2: 0.8767630855458215
[2025-06-04 07:41:40] 2025-06-04 03:50:38,635 | INFO     | current chi2=0.8767630855458215 (change=65.39377725567705 %)
[2025-06-04 07:41:40] 2025-06-04 03:50:38,636 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 07:41:40] 2025-06-04 03:50:38,637 | INFO     | sum of deviations: -19967376257.0
[2025-06-04 07:41:40] 2025-06-04 03:50:38,638 | INFO     | mean x: 1749002620.0
[2025-06-04 07:41:40] 2025-06-04 03:50:38,638 | INFO     | mean y: 2485719.115942029
[2025-06-04 07:41:40] 2025-06-04 03:50:38,638 | INFO     | -- intersect: 12700392573.11583
[2025-06-04 07:41:40] 2025-06-04 03:50:38,638 | INFO     | intersect: 12700392573.11583
[2025-06-04 07:41:40] 2025-06-04 03:50:38,638 | INFO     | chi2: 0.8668482173068891
[2025-06-04 07:41:40] 2025-06-04 03:50:38,638 | INFO     | current chi2=0.8668482173068891 (change=1.130849188610624 %)
[2025-06-04 07:41:40] 2025-06-04 03:50:38,639 | INFO     | left removable region: 20
[2025-06-04 07:41:40] 2025-06-04 03:50:38,639 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 07:41:40] 2025-06-04 03:50:38,640 | INFO     | sum of deviations: 4914786348.000002
[2025-06-04 07:41:40] 2025-06-04 03:50:38,641 | INFO     | mean x: 1749002589.5
[2025-06-04 07:41:40] 2025-06-04 03:50:38,641 | INFO     | mean y: 2486832.139784946
[2025-06-04 07:41:40] 2025-06-04 03:50:38,641 | INFO     | -- intersect: -4305658967.341668
[2025-06-04 07:41:40] 2025-06-04 03:50:38,641 | INFO     | intersect: -4305658967.341668
[2025-06-04 07:41:40] 2025-06-04 03:50:38,641 | INFO     | chi2: 0.0007609868758305272
[2025-06-04 07:41:40] 2025-06-04 03:50:38,642 | INFO     | -- intersect: -4305658967.341668
[2025-06-04 07:41:40] 2025-06-04 03:50:38,642 | INFO     | current memory leak: 2.46 B/s (using 186 data points, chi2=0.00)
[2025-06-04 07:41:40] 2025-06-04 03:50:38,643 | INFO     | ..............................
[2025-06-04 07:41:40] 2025-06-04 03:50:38,643 | INFO     | . Timing measurements:
[2025-06-04 07:41:40] 2025-06-04 03:50:38,643 | INFO     | . get job = 0 s
[2025-06-04 07:41:40] 2025-06-04 03:50:38,643 | INFO     | . initial setup = 2 s
[2025-06-04 07:41:40] 2025-06-04 03:50:38,643 | INFO     | . payload setup = 26 s
[2025-06-04 07:41:40] 2025-06-04 03:50:38,643 | INFO     | . stage-in = 0 s
[2025-06-04 07:41:40] 2025-06-04 03:50:38,643 | INFO     | . payload execution = 13243 s
[2025-06-04 07:41:40] 2025-06-04 03:50:38,643 | INFO     | . stage-out = 3 s
[2025-06-04 07:41:40] 2025-06-04 03:50:38,644 | INFO     | . log creation = 1 s
[2025-06-04 07:41:40] 2025-06-04 03:50:38,644 | INFO     | ..............................
[2025-06-04 07:41:40] 2025-06-04 03:50:39,070 | INFO     | 
[2025-06-04 07:41:40] 2025-06-04 03:50:39,070 | INFO     | job summary report
[2025-06-04 07:41:40] 2025-06-04 03:50:39,070 | INFO     | --------------------------------------------------
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | PanDA job id: 6677553072
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | task id: 45006595
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | errors: (none)
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | pilot state: finished 
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | transexitcode: 0
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | exeerrorcode: 0
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | exeerrordiag: 
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | exitcode: 0
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | exitmsg: OK
[2025-06-04 07:41:40] 2025-06-04 03:50:39,071 | INFO     | cpuconsumptiontime: 49798 s
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | nevents: 400
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | neventsw: 0
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | pid: 21336
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | pgrp: 21336
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | corecount: 8
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | event service: False
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | sizes: {0: 2405013, 1: 2405212, 9: 2405418, 12: 2405446, 13274: 2434953, 13279: 2443894, 13281: 2444078, 13369: 2444248}
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | --------------------------------------------------
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | 
[2025-06-04 07:41:40] 2025-06-04 03:50:39,072 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 07:41:40] 2025-06-04 03:50:39,494 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,494 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,494 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,494 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,495 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 07:41:40] 2025-06-04 03:50:39,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,496 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 07:41:40] 2025-06-04 03:50:39,496 | INFO     | job 6677553072 has completed (purged errors)
[2025-06-04 07:41:40] 2025-06-04 03:50:39,496 | INFO     | overall cleanup function is called
[2025-06-04 07:41:40] 2025-06-04 03:50:40,506 | INFO     | --- collectZombieJob: --- 10, [21336]
[2025-06-04 07:41:40] 2025-06-04 03:50:40,506 | INFO     | zombie collector waiting for pid 21336
[2025-06-04 07:41:40] 2025-06-04 03:50:40,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 07:41:40] 2025-06-04 03:50:40,507 | INFO     | collected zombie processes
[2025-06-04 07:41:40] 2025-06-04 03:50:40,507 | INFO     | will attempt to kill all subprocesses of pid=21336
[2025-06-04 07:41:40] 2025-06-04 03:50:40,650 | INFO     | process IDs to be killed: [21336] (in reverse order)
[2025-06-04 07:41:40] 2025-06-04 03:50:41,169 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 07:41:40] 2025-06-04 03:50:41,169 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 07:41:40] 2025-06-04 03:50:41,173 | INFO     | did not find any defunct processes belonging to 21336
[2025-06-04 07:41:40] 2025-06-04 03:50:41,176 | INFO     | did not find any defunct processes belonging to 21336
[2025-06-04 07:41:40] 2025-06-04 03:50:41,177 | INFO     | ready for new job
[2025-06-04 07:41:40] 2025-06-04 03:50:41,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 07:41:40] 2025-06-04 03:50:41,179 | INFO     | **************************************
[2025-06-04 07:41:40] 2025-06-04 03:50:41,179 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 07:41:40] 2025-06-04 03:50:41,179 | INFO     | **************************************
[2025-06-04 07:41:40] 2025-06-04 03:50:41,179 | INFO     | 
[2025-06-04 07:41:40] 2025-06-04 03:50:41,180 | INFO     | pilot is running in a VM
[2025-06-04 07:41:40] 2025-06-04 03:50:41,180 | INFO     | architecture information:
[2025-06-04 07:41:40] 2025-06-04 03:50:41,181 | INFO     | executing command: cat /etc/os-release
[2025-06-04 07:41:40] 2025-06-04 03:50:41,310 | INFO     | cat /etc/os-release:
[2025-06-04 07:41:40] NAME="CentOS Linux"
[2025-06-04 07:41:40] VERSION="7 (Core)"
[2025-06-04 07:41:40] ID="centos"
[2025-06-04 07:41:40] ID_LIKE="rhel fedora"
[2025-06-04 07:41:40] VERSION_ID="7"
[2025-06-04 07:41:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 07:41:40] ANSI_COLOR="0;31"
[2025-06-04 07:41:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 07:41:40] HOME_URL="https://www.centos.org/"
[2025-06-04 07:41:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 07:41:40] 
[2025-06-04 07:41:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 07:41:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 07:41:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 07:41:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 07:41:40] 
[2025-06-04 07:41:40] 2025-06-04 03:50:41,310 | INFO     | **************************************
[2025-06-04 07:41:40] 2025-06-04 03:50:41,814 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 07:41:40] 2025-06-04 03:50:41,899 | INFO     | sufficient remaining disk space (496977838080 B)
[2025-06-04 07:41:40] 2025-06-04 03:50:41,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 07:41:40] 2025-06-04 03:50:41,899 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 07:41:40] 2025-06-04 03:50:41,899 | INFO     | update_server=False
[2025-06-04 07:41:40] 2025-06-04 03:50:41,900 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 07:41:40] 2025-06-04 03:50:41,904 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 07:41:40] 2025-06-04 03:50:41,905 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 07:41:40] 2025-06-04 03:50:41,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 07:41:40] 2025-06-04 03:50:41,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 07:41:40] 2025-06-04 03:50:42,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 07:41:40] 2025-06-04 03:50:42,795 | INFO     | all job control threads have been joined
[2025-06-04 07:41:40] 2025-06-04 03:50:42,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:41:40] 2025-06-04 03:50:42,877 | INFO     | aborting loop
[2025-06-04 07:41:40] 2025-06-04 03:50:42,905 | INFO     | [job] retrieve thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:42,949 | INFO     | all data control threads have been joined
[2025-06-04 07:41:40] 2025-06-04 03:50:43,087 | INFO     | [payload] failed_post thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:43,176 | INFO     | [payload] validate_post thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:43,210 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:43,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 07:41:40] 2025-06-04 03:50:43,381 | INFO     | all payload control threads have been joined
[2025-06-04 07:41:40] 2025-06-04 03:50:43,452 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:43,573 | INFO     | [data] copytool_in thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:43,801 | INFO     | [job] control thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:43,809 | INFO     | [job] validate thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:43,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 07:41:40] 2025-06-04 03:50:43,883 | INFO     | [job] job monitor thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:43,955 | INFO     | [data] control thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:44,238 | INFO     | [data] copytool_out thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:44,382 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:44,387 | INFO     | [payload] control thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:44,825 | INFO     | [job] queue monitor thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:47,310 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:52,427 | INFO     | job.realtimelogging is not enabled
[2025-06-04 07:41:40] 2025-06-04 03:50:53,433 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 07:41:40] 2025-06-04 03:50:55,415 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798421841728)>', '<ExcThread(monitor, started 139798115227392)>']
[2025-06-04 07:41:40] 2025-06-04 03:50:55,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 07:41:40] 2025-06-04 03:50:55,988 | INFO     | [monitor] control thread has ended
[2025-06-04 07:41:40] 2025-06-04 03:51:00,441 | INFO     | all workflow threads have been joined
[2025-06-04 07:41:40] 2025-06-04 03:51:00,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 07:41:40] 2025-06-04 03:51:00,442 | INFO     | traces error code: 0
[2025-06-04 07:41:40] 2025-06-04 03:51:00,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 07:41:40] 2025-06-04 03:51:00,704 [wrapper] ==== pilot stdout END ====
[2025-06-04 07:41:40] 2025-06-04 03:51:00,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 07:41:40] 2025-06-04 03:51:00,755 [wrapper] pilotpid: 9605
[2025-06-04 07:41:40] 2025-06-04 03:51:00,835 [wrapper] Pilot exit status: 0
[2025-06-04 07:41:40] 2025-06-04 03:51:01,321 [wrapper] pandaids: 6677553072
[2025-06-04 07:41:40] 2025-06-04 03:51:02,417 [wrapper] cleanup supervisor_pilot 16367 9606
[2025-06-04 07:41:40] 2025-06-04 03:51:02,529 [wrapper] Test setup, not cleaning
[2025-06-04 07:41:40] 2025-06-04 03:51:02,642 [wrapper] apfmon messages muted
[2025-06-04 07:41:40] 2025-06-04 03:51:02,738 [wrapper] ==== wrapper stdout END ====
[2025-06-04 07:41:40] 2025-06-04 03:51:02,816 [wrapper] ==== wrapper stderr END ====
[2025-06-04 07:41:40]  *** Error codes and diagnostics ***
[2025-06-04 07:41:40]     "exeErrorCode": 0,
[2025-06-04 07:41:40]     "exeErrorDiag": "",
[2025-06-04 07:41:40]     "pilotErrorCode": 0,
[2025-06-04 07:41:40]     "pilotErrorDiag": "",
[2025-06-04 07:41:40]  *** Listing of results directory ***
[2025-06-04 07:41:40] total 391676
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc    495897 Jun  3 11:45 pilot3.tar.gz
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:54 queuedata.json
[2025-06-04 07:41:40] -rwx------. 1 boinc boinc     37140 Jun  3 11:54 runpilot2-wrapper.sh
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc       100 Jun  4 02:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 07:41:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 02:07 run_atlas
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc       105 Jun  4 02:07 job.xml
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc      6390 Jun  4 02:07 init_data.xml
[2025-06-04 07:41:40] -rw-r--r--. 2 boinc boinc 213359422 Jun  4 02:07 EVNT.45006593._001113.pool.root.1
[2025-06-04 07:41:40] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:07 start_atlas.sh
[2025-06-04 07:41:40] drwxrwx--x. 2 boinc boinc        68 Jun  4 02:07 shared
[2025-06-04 07:41:40] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:07 input.tar.gz
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc         0 Jun  4 02:07 boinc_lockfile
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc      2525 Jun  4 02:07 pandaJob.out
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc    986077 Jun  4 02:07 agis_schedconf.cvmfs.json
[2025-06-04 07:41:40] drwx------. 4 boinc boinc      4096 Jun  4 02:07 pilot3
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc 180824535 Jun  4 05:47 HITS.45006595._027832.pool.root.1
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc       530 Jun  4 05:48 boinc_task_state.xml
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc      1020 Jun  4 05:49 memory_monitor_summary.json
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc   1603667 Jun  4 05:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc    381471 Jun  4 05:49 log.45006595._027832.job.log.tgz.1
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc        95 Jun  4 05:49 pilot_heartbeat.json
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc      7685 Jun  4 05:50 heartbeat.json
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc      4611 Jun  4 05:51 pilotlog.txt
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc   1157620 Jun  4 05:51 log.45006595._027832.job.log.1
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc       357 Jun  4 05:51 output.list
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc       620 Jun  4 05:51 runtime_log
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc   1556480 Jun  4 05:51 result.tar.gz
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc       656 Jun  4 05:51 SAhKDm3Wdg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmuIjKDmnx5wLo.diag
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc      8659 Jun  4 05:51 runtime_log.err
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc      8192 Jun  4 07:41 boinc_mmap_file
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc        28 Jun  4 07:41 wrapper_checkpoint.txt
[2025-06-04 07:41:40] -rw-r--r--. 1 boinc boinc     20465 Jun  4 07:41 stderr.txt
[2025-06-04 07:41:40] HITS file was successfully produced:
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc 180824535 Jun  4 05:47 shared/HITS.pool.root.1
[2025-06-04 07:41:40]  *** Contents of shared directory: ***
[2025-06-04 07:41:40] total 386984
[2025-06-04 07:41:40] -rw-r--r--. 2 boinc boinc 213359422 Jun  4 02:07 ATLAS.root_0
[2025-06-04 07:41:40] -rw-r--r--. 2 boinc boinc     15093 Jun  4 02:07 start_atlas.sh
[2025-06-04 07:41:40] -rw-r--r--. 2 boinc boinc    508881 Jun  4 02:07 input.tar.gz
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc 180824535 Jun  4 05:47 HITS.pool.root.1
[2025-06-04 07:41:40] -rw-------. 1 boinc boinc   1556480 Jun  4 05:51 result.tar.gz
07:41:42 (3926): run_atlas exited; CPU time 49976.872405
07:41:42 (3926): called boinc_finish(0)

</stderr_txt>
]]>

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