Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:27:38 (19184): wrapper (7.7.26015): starting
22:27:38 (19184): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 22:27:38] Arguments: --nthreads 8
[2025-06-03 22:27:38] Threads: 8
[2025-06-03 22:27:38] Checking for CVMFS
[2025-06-03 22:27:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:27:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:27:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:27:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:27:40] 2.11.2.0 16344 32247 88892 146755 2 59 17784480 25165824 4278 130560 0 16575833 99.775 19738793 2089 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 22:27:40] CVMFS is ok
[2025-06-03 22:27:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:27:40] Checking for apptainer binary...
[2025-06-03 22:27:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:27:40] Running /usr/bin/apptainer --version
[2025-06-03 22:27:40] apptainer version 1.3.2-1.el7
[2025-06-03 22:27:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:58:16] cg-vwn432.simple-grid.lan
[2025-06-03 22:58:16] apptainer works
[2025-06-03 22:58:16] Set ATHENA_PROC_NUMBER=8
[2025-06-03 22:58:16] Set ATHENA_CORE_NUMBER=8
[2025-06-03 22:58:16] Starting ATLAS job with PandaID=6677571444
[2025-06-03 22:58:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:04:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:04:13] 2025-06-04 00:58:42,812 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677571444/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:04:13] 2025-06-04 00:58:42,813 | INFO     | extracted standard info from prmon json
[2025-06-04 03:04:13] 2025-06-04 00:58:42,813 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:04:13] 2025-06-04 00:58:42,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:04:13] 2025-06-04 00:58:42,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:04:13] 2025-06-04 00:58:42,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:04:13] 2025-06-04 00:58:42,819 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:04:13] 2025-06-04 00:58:42,819 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,821 | INFO     | sum of deviations: 77893893910.5
[2025-06-04 03:04:13] 2025-06-04 00:58:42,821 | INFO     | mean x: 1748991790.5
[2025-06-04 03:04:13] 2025-06-04 00:58:42,822 | INFO     | mean y: 2432825.53125
[2025-06-04 03:04:13] 2025-06-04 00:58:42,822 | INFO     | -- intersect: -39088619545.28723
[2025-06-04 03:04:13] 2025-06-04 00:58:42,822 | INFO     | intersect: -39088619545.28723
[2025-06-04 03:04:13] 2025-06-04 00:58:42,822 | INFO     | chi2: 8.343530366502398
[2025-06-04 03:04:13] 2025-06-04 00:58:42,823 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,825 | INFO     | sum of deviations: 90919512532.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,825 | INFO     | mean x: 1748991638.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,825 | INFO     | mean y: 2441351.2694063927
[2025-06-04 03:04:13] 2025-06-04 00:58:42,825 | INFO     | -- intersect: -48822656061.52638
[2025-06-04 03:04:13] 2025-06-04 00:58:42,825 | INFO     | intersect: -48822656061.52638
[2025-06-04 03:04:13] 2025-06-04 00:58:42,826 | INFO     | chi2: 7.660659423547364
[2025-06-04 03:04:13] 2025-06-04 00:58:42,826 | INFO     | current chi2=7.660659423547364 (change=8.18443647903079 %)
[2025-06-04 03:04:13] 2025-06-04 00:58:42,826 | INFO     | right removable region: 218
[2025-06-04 03:04:13] 2025-06-04 00:58:42,826 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,828 | INFO     | sum of deviations: -312071424.9999981
[2025-06-04 03:04:13] 2025-06-04 00:58:42,829 | INFO     | mean x: 1748991943.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,829 | INFO     | mean y: 2485052.7488584477
[2025-06-04 03:04:13] 2025-06-04 00:58:42,829 | INFO     | -- intersect: 170071965.15251058
[2025-06-04 03:04:13] 2025-06-04 00:58:42,829 | INFO     | intersect: 170071965.15251058
[2025-06-04 03:04:13] 2025-06-04 00:58:42,829 | INFO     | chi2: 3.212973396717488
[2025-06-04 03:04:13] 2025-06-04 00:58:42,829 | INFO     | current chi2=3.212973396717488 (change=61.49144000701511 %)
[2025-06-04 03:04:13] 2025-06-04 00:58:42,830 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 03:04:13] 2025-06-04 00:58:42,832 | INFO     | sum of deviations: -50096640278.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,832 | INFO     | mean x: 1748992095.5
[2025-06-04 03:04:13] 2025-06-04 00:58:42,832 | INFO     | mean y: 2519732.971962617
[2025-06-04 03:04:13] 2025-06-04 00:58:42,832 | INFO     | -- intersect: 28835277742.33732
[2025-06-04 03:04:13] 2025-06-04 00:58:42,832 | INFO     | intersect: 28835277742.33732
[2025-06-04 03:04:13] 2025-06-04 00:58:42,833 | INFO     | chi2: 1.0483260576139966
[2025-06-04 03:04:13] 2025-06-04 00:58:42,833 | INFO     | current chi2=1.0483260576139966 (change=67.37209032963013 %)
[2025-06-04 03:04:13] 2025-06-04 00:58:42,833 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,835 | INFO     | sum of deviations: -55120952675.00001
[2025-06-04 03:04:13] 2025-06-04 00:58:42,835 | INFO     | mean x: 1748992248.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,835 | INFO     | mean y: 2523355.5933014355
[2025-06-04 03:04:13] 2025-06-04 00:58:42,835 | INFO     | -- intersect: 34058807433.808002
[2025-06-04 03:04:13] 2025-06-04 00:58:42,835 | INFO     | intersect: 34058807433.808002
[2025-06-04 03:04:13] 2025-06-04 00:58:42,836 | INFO     | chi2: 0.9740591926412354
[2025-06-04 03:04:13] 2025-06-04 00:58:42,836 | INFO     | current chi2=0.9740591926412354 (change=7.084328814814874 %)
[2025-06-04 03:04:13] 2025-06-04 00:58:42,836 | INFO     | left removable region: 30
[2025-06-04 03:04:13] 2025-06-04 00:58:42,836 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,838 | INFO     | sum of deviations: -21247973413.0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,838 | INFO     | mean x: 1748992522.5
[2025-06-04 03:04:13] 2025-06-04 00:58:42,838 | INFO     | mean y: 2518858.670212766
[2025-06-04 03:04:13] 2025-06-04 00:58:42,838 | INFO     | -- intersect: 18039580233.368965
[2025-06-04 03:04:13] 2025-06-04 00:58:42,839 | INFO     | intersect: 18039580233.368965
[2025-06-04 03:04:13] 2025-06-04 00:58:42,839 | INFO     | chi2: 0.14733670294948817
[2025-06-04 03:04:13] 2025-06-04 00:58:42,839 | INFO     | -- intersect: 18039580233.368965
[2025-06-04 03:04:13] 2025-06-04 00:58:42,839 | INFO     | current memory leak: -10.31 B/s (using 188 data points, chi2=0.15)
[2025-06-04 03:04:13] 2025-06-04 00:58:42,840 | INFO     | ..............................
[2025-06-04 03:04:13] 2025-06-04 00:58:42,840 | INFO     | . Timing measurements:
[2025-06-04 03:04:13] 2025-06-04 00:58:42,840 | INFO     | . get job = 0 s
[2025-06-04 03:04:13] 2025-06-04 00:58:42,841 | INFO     | . initial setup = 3 s
[2025-06-04 03:04:13] 2025-06-04 00:58:42,841 | INFO     | . payload setup = 155 s
[2025-06-04 03:04:13] 2025-06-04 00:58:42,841 | INFO     | . stage-in = 0 s
[2025-06-04 03:04:13] 2025-06-04 00:58:42,841 | INFO     | . payload execution = 13787 s
[2025-06-04 03:04:13] 2025-06-04 00:58:42,841 | INFO     | . stage-out = 12 s
[2025-06-04 03:04:13] 2025-06-04 00:58:42,841 | INFO     | . log creation = 1 s
[2025-06-04 03:04:13] 2025-06-04 00:58:42,841 | INFO     | ..............................
[2025-06-04 03:04:13] 2025-06-04 00:58:42,975 | INFO     | 
[2025-06-04 03:04:13] 2025-06-04 00:58:42,976 | INFO     | job summary report
[2025-06-04 03:04:13] 2025-06-04 00:58:42,976 | INFO     | --------------------------------------------------
[2025-06-04 03:04:13] 2025-06-04 00:58:42,976 | INFO     | PanDA job id: 6677571444
[2025-06-04 03:04:13] 2025-06-04 00:58:42,976 | INFO     | task id: 45006595
[2025-06-04 03:04:13] 2025-06-04 00:58:42,976 | INFO     | errors: (none)
[2025-06-04 03:04:13] 2025-06-04 00:58:42,976 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:04:13] 2025-06-04 00:58:42,976 | INFO     | pilot state: finished 
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | transexitcode: 0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | exeerrorcode: 0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | exeerrordiag: 
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | exitcode: 0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | exitmsg: OK
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | cpuconsumptiontime: 49931 s
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | nevents: 400
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | neventsw: 0
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | pid: 16465
[2025-06-04 03:04:13] 2025-06-04 00:58:42,977 | INFO     | pgrp: 16465
[2025-06-04 03:04:13] 2025-06-04 00:58:42,978 | INFO     | corecount: 8
[2025-06-04 03:04:13] 2025-06-04 00:58:42,978 | INFO     | event service: False
[2025-06-04 03:04:13] 2025-06-04 00:58:42,978 | INFO     | sizes: {0: 2405011, 1: 2405210, 12: 2405210, 22: 2405238, 33: 2405266, 44: 2405322, 55: 2405478, 65: 2405506, 76: 2405534, 87: 2405590, 93: 2405824, 97: 2406132, 1
[2025-06-04 03:04:13] 2025-06-04 00:58:42,978 | INFO     | --------------------------------------------------
[2025-06-04 03:04:13] 2025-06-04 00:58:42,978 | INFO     | 
[2025-06-04 03:04:13] 2025-06-04 00:58:42,978 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 03:04:13] 2025-06-04 00:58:43,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:04:13] 2025-06-04 00:58:43,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:04:13] 2025-06-04 00:58:43,029 | INFO     | job 6677571444 has completed (purged errors)
[2025-06-04 03:04:13] 2025-06-04 00:58:43,029 | INFO     | overall cleanup function is called
[2025-06-04 03:04:13] 2025-06-04 00:58:44,037 | INFO     | --- collectZombieJob: --- 10, [16465]
[2025-06-04 03:04:13] 2025-06-04 00:58:44,038 | INFO     | zombie collector waiting for pid 16465
[2025-06-04 03:04:13] 2025-06-04 00:58:44,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:04:13] 2025-06-04 00:58:44,038 | INFO     | collected zombie processes
[2025-06-04 03:04:13] 2025-06-04 00:58:44,038 | INFO     | will attempt to kill all subprocesses of pid=16465
[2025-06-04 03:04:13] 2025-06-04 00:58:44,176 | INFO     | process IDs to be killed: [16465] (in reverse order)
[2025-06-04 03:04:13] 2025-06-04 00:58:44,734 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:04:13] 2025-06-04 00:58:44,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:04:13] 2025-06-04 00:58:44,738 | INFO     | did not find any defunct processes belonging to 16465
[2025-06-04 03:04:13] 2025-06-04 00:58:44,741 | INFO     | did not find any defunct processes belonging to 16465
[2025-06-04 03:04:13] 2025-06-04 00:58:44,741 | INFO     | ready for new job
[2025-06-04 03:04:13] 2025-06-04 00:58:44,742 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:04:13] 2025-06-04 00:58:44,743 | INFO     | **************************************
[2025-06-04 03:04:13] 2025-06-04 00:58:44,744 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:04:13] 2025-06-04 00:58:44,744 | INFO     | **************************************
[2025-06-04 03:04:13] 2025-06-04 00:58:44,744 | INFO     | 
[2025-06-04 03:04:13] 2025-06-04 00:58:44,745 | INFO     | pilot is running in a VM
[2025-06-04 03:04:13] 2025-06-04 00:58:44,745 | INFO     | architecture information:
[2025-06-04 03:04:13] 2025-06-04 00:58:44,750 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:04:13] 2025-06-04 00:58:45,064 | INFO     | cat /etc/os-release:
[2025-06-04 03:04:13] NAME="CentOS Linux"
[2025-06-04 03:04:13] VERSION="7 (Core)"
[2025-06-04 03:04:13] ID="centos"
[2025-06-04 03:04:13] ID_LIKE="rhel fedora"
[2025-06-04 03:04:13] VERSION_ID="7"
[2025-06-04 03:04:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:04:13] ANSI_COLOR="0;31"
[2025-06-04 03:04:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:04:13] HOME_URL="https://www.centos.org/"
[2025-06-04 03:04:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:04:13] 
[2025-06-04 03:04:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:04:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:04:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:04:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:04:13] 
[2025-06-04 03:04:13] 2025-06-04 00:58:45,064 | INFO     | **************************************
[2025-06-04 03:04:13] 2025-06-04 00:58:45,567 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 03:04:13] 2025-06-04 00:58:45,782 | INFO     | sufficient remaining disk space (496618176512 B)
[2025-06-04 03:04:13] 2025-06-04 00:58:45,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:04:13] 2025-06-04 00:58:45,782 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:04:13] 2025-06-04 00:58:45,783 | INFO     | update_server=False
[2025-06-04 03:04:13] 2025-06-04 00:58:45,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:04:13] 2025-06-04 00:58:45,808 | INFO     | all data control threads have been joined
[2025-06-04 03:04:13] 2025-06-04 00:58:45,924 | INFO     | all payload control threads have been joined
[2025-06-04 03:04:13] 2025-06-04 00:58:46,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:04:13] 2025-06-04 00:58:46,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:04:13] 2025-06-04 00:58:46,178 | INFO     | aborting loop
[2025-06-04 03:04:13] 2025-06-04 00:58:46,661 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:04:13] 2025-06-04 00:58:46,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:04:13] 2025-06-04 00:58:46,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:04:13] 2025-06-04 00:58:46,789 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:46,815 | INFO     | [data] control thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:46,823 | INFO     | all job control threads have been joined
[2025-06-04 03:04:13] 2025-06-04 00:58:46,880 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:46,930 | INFO     | [payload] control thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:47,043 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:47,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:04:13] 2025-06-04 00:58:47,183 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:47,381 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:47,475 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:47,508 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:47,667 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:47,829 | INFO     | [job] control thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:47,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:04:13] 2025-06-04 00:58:48,126 | INFO     | [job] validate thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:48,212 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:48,997 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:49,068 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:50,156 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:04:13] 2025-06-04 00:58:52,149 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655402190656)>', '<ExcThread(monitor, started 139654737155840)>']
[2025-06-04 03:04:13] 2025-06-04 00:58:52,697 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:04:13] 2025-06-04 00:58:52,698 | INFO     | [monitor] control thread has ended
[2025-06-04 03:04:13] 2025-06-04 00:58:57,174 | INFO     | all workflow threads have been joined
[2025-06-04 03:04:13] 2025-06-04 00:58:57,175 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:04:13] 2025-06-04 00:58:57,175 | INFO     | traces error code: 0
[2025-06-04 03:04:13] 2025-06-04 00:58:57,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:04:13] 2025-06-04 00:58:57,539 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:04:13] 2025-06-04 00:58:57,648 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:04:13] 2025-06-04 00:58:57,755 [wrapper] pilotpid: 7850
[2025-06-04 03:04:13] 2025-06-04 00:58:57,814 [wrapper] Pilot exit status: 0
[2025-06-04 03:04:13] 2025-06-04 00:58:58,242 [wrapper] pandaids: 6677571444
[2025-06-04 03:04:13] 2025-06-04 00:58:59,078 [wrapper] cleanup supervisor_pilot  9443 7851
[2025-06-04 03:04:13] 2025-06-04 00:58:59,171 [wrapper] Test setup, not cleaning
[2025-06-04 03:04:13] 2025-06-04 00:58:59,258 [wrapper] apfmon messages muted
[2025-06-04 03:04:13] 2025-06-04 00:58:59,337 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:04:13] 2025-06-04 00:58:59,406 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:04:13]  *** Error codes and diagnostics ***
[2025-06-04 03:04:13]     "exeErrorCode": 0,
[2025-06-04 03:04:13]     "exeErrorDiag": "",
[2025-06-04 03:04:13]     "pilotErrorCode": 0,
[2025-06-04 03:04:13]     "pilotErrorDiag": "",
[2025-06-04 03:04:13]  *** Listing of results directory ***
[2025-06-04 03:04:13] total 390312
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc    495897 Jun  3 11:56 pilot3.tar.gz
[2025-06-04 03:04:13] -rwx------. 1 boinc boinc     37140 Jun  3 12:01 runpilot2-wrapper.sh
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc      5111 Jun  3 12:01 queuedata.json
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc       100 Jun  3 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:04:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 22:27 run_atlas
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc       105 Jun  3 22:27 job.xml
[2025-06-04 03:04:13] -rw-r--r--. 2 boinc boinc 214176689 Jun  3 22:27 EVNT.45006593._001121.pool.root.1
[2025-06-04 03:04:13] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:27 start_atlas.sh
[2025-06-04 03:04:13] drwxrwx--x. 2 boinc boinc        68 Jun  3 22:27 shared
[2025-06-04 03:04:13] -rw-r--r--. 2 boinc boinc    508878 Jun  3 22:27 input.tar.gz
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc      6391 Jun  3 22:27 init_data.xml
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc         0 Jun  3 22:27 boinc_lockfile
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc      2524 Jun  3 22:58 pandaJob.out
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc    986853 Jun  3 23:01 agis_schedconf.cvmfs.json
[2025-06-04 03:04:13] drwx------. 4 boinc boinc      4096 Jun  3 23:01 pilot3
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc 178503562 Jun  4 02:55 HITS.45006595._028026.pool.root.1
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc       531 Jun  4 02:55 boinc_task_state.xml
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc      1015 Jun  4 02:57 memory_monitor_summary.json
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc   1603667 Jun  4 02:57 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc    371796 Jun  4 02:57 log.45006595._028026.job.log.tgz.1
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc        95 Jun  4 02:57 pilot_heartbeat.json
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc      7692 Jun  4 02:58 heartbeat.json
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc      4416 Jun  4 02:58 pilotlog.txt
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc   1214579 Jun  4 02:58 log.45006595._028026.job.log.1
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc       357 Jun  4 02:59 output.list
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc       620 Jun  4 02:59 runtime_log
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc   1607680 Jun  4 02:59 result.tar.gz
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc      8659 Jun  4 02:59 runtime_log.err
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc       656 Jun  4 02:59 70xNDmcddg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8DYKDmUWXLWo.diag
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc      8192 Jun  4 03:04 boinc_mmap_file
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc        28 Jun  4 03:04 wrapper_checkpoint.txt
[2025-06-04 03:04:13] -rw-r--r--. 1 boinc boinc     20513 Jun  4 03:04 stderr.txt
[2025-06-04 03:04:13] HITS file was successfully produced:
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc 178503562 Jun  4 02:55 shared/HITS.pool.root.1
[2025-06-04 03:04:13]  *** Contents of shared directory: ***
[2025-06-04 03:04:13] total 385568
[2025-06-04 03:04:13] -rw-r--r--. 2 boinc boinc 214176689 Jun  3 22:27 ATLAS.root_0
[2025-06-04 03:04:13] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:27 start_atlas.sh
[2025-06-04 03:04:13] -rw-r--r--. 2 boinc boinc    508878 Jun  3 22:27 input.tar.gz
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc 178503562 Jun  4 02:55 HITS.pool.root.1
[2025-06-04 03:04:13] -rw-------. 1 boinc boinc   1607680 Jun  4 02:59 result.tar.gz
03:04:15 (19184): run_atlas exited; CPU time 50134.275596
03:04:15 (19184): called boinc_finish(0)

</stderr_txt>
]]>

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