Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:49:53 (43121): wrapper (7.7.26015): starting
08:49:53 (43121): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:49:53] Arguments: --nthreads 8
[2025-06-03 08:49:53] Threads: 8
[2025-06-03 08:49:53] Checking for CVMFS
[2025-06-03 08:49:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:49:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:49:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:49:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:49:54] 2.11.2.0 21479 67539 432936 146742 1 58 16447814 18432000 3665 130560 0 106027944 98.634 312800721 36554 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 08:49:54] CVMFS is ok
[2025-06-03 08:49:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 08:49:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 08:49:54] Further information can be found at the LHC@home message board.
[2025-06-03 08:49:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:49:54] Checking for apptainer binary...
[2025-06-03 08:49:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:49:54] Running /usr/bin/apptainer --version
[2025-06-03 08:49:54] apptainer version 1.3.2-1.el7
[2025-06-03 08:49:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:49:55] c-211-24.aglt2.org
[2025-06-03 08:49:55] apptainer works
[2025-06-03 08:49:55] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:49:55] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:49:55] Starting ATLAS job with PandaID=6677571516
[2025-06-03 08:49:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:17:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:17:09] 2025-06-03 15:16:46,118 | INFO     | monitor loop #630: job 0:6677571516 is in state 'finished'
[2025-06-03 11:17:09] 2025-06-03 15:16:46,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:17:09] 2025-06-03 15:16:46,124 | INFO     | PID=46719 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 11:17:09] 2025-06-03 15:16:46,124 | INFO     | .. there are 5 such processes running
[2025-06-03 11:17:09] 2025-06-03 15:16:48,621 | INFO     | monitor loop #631: job 0:6677571516 is in state 'finished'
[2025-06-03 11:17:09] 2025-06-03 15:16:48,621 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 11:17:09] 2025-06-03 15:16:50,595 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 11:17:09] 2025-06-03 15:16:50,595 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677571516/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:17:09] 2025-06-03 15:16:50,596 | INFO     | extracted standard info from prmon json
[2025-06-03 11:17:09] 2025-06-03 15:16:50,596 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:17:09] 2025-06-03 15:16:50,596 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:17:09] 2025-06-03 15:16:50,597 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:17:09] 2025-06-03 15:16:50,597 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:17:09] 2025-06-03 15:16:50,601 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:17:09] 2025-06-03 15:16:50,602 | INFO     | sum of square deviations: 925859220.0
[2025-06-03 11:17:09] 2025-06-03 15:16:50,603 | INFO     | sum of deviations: 14558663545.500006
[2025-06-03 11:17:09] 2025-06-03 15:16:50,603 | INFO     | mean x: 1748959393.5
[2025-06-03 11:17:09] 2025-06-03 15:16:50,603 | INFO     | mean y: 2460103.8541666665
[2025-06-03 11:17:09] 2025-06-03 15:16:50,603 | INFO     | -- intersect: -27499033443.629486
[2025-06-03 11:17:09] 2025-06-03 15:16:50,604 | INFO     | intersect: -27499033443.629486
[2025-06-03 11:17:09] 2025-06-03 15:16:50,604 | INFO     | chi2: 1.3756395882301515
[2025-06-03 11:17:09] 2025-06-03 15:16:50,604 | INFO     | sum of square deviations: 832722590.0
[2025-06-03 11:17:09] 2025-06-03 15:16:50,605 | INFO     | sum of deviations: 14029184307.999998
[2025-06-03 11:17:09] 2025-06-03 15:16:50,606 | INFO     | mean x: 1748959241.0
[2025-06-03 11:17:09] 2025-06-03 15:16:50,606 | INFO     | mean y: 2459236.2302158275
[2025-06-03 11:17:09] 2025-06-03 15:16:50,606 | INFO     | -- intersect: -29462901537.96085
[2025-06-03 11:17:09] 2025-06-03 15:16:50,606 | INFO     | intersect: -29462901537.96085
[2025-06-03 11:17:09] 2025-06-03 15:16:50,606 | INFO     | chi2: 1.3772834988958076
[2025-06-03 11:17:09] 2025-06-03 15:16:50,607 | INFO     | current chi2=1.3772834988958076 (change=-0.1195015525666176 %)
[2025-06-03 11:17:09] 2025-06-03 15:16:50,607 | INFO     | right removable region: 138
[2025-06-03 11:17:09] 2025-06-03 15:16:50,607 | INFO     | sum of square deviations: 832722590.0
[2025-06-03 11:17:09] 2025-06-03 15:16:50,608 | INFO     | sum of deviations: -5294967749.999998
[2025-06-03 11:17:09] 2025-06-03 15:16:50,608 | INFO     | mean x: 1748959546.0
[2025-06-03 11:17:09] 2025-06-03 15:16:50,608 | INFO     | mean y: 2492052.7913669064
[2025-06-03 11:17:09] 2025-06-03 15:16:50,609 | INFO     | -- intersect: 11123463794.562702
[2025-06-03 11:17:09] 2025-06-03 15:16:50,609 | INFO     | intersect: 11123463794.562702
[2025-06-03 11:17:09] 2025-06-03 15:16:50,609 | INFO     | chi2: 0.03333167408998716
[2025-06-03 11:17:09] 2025-06-03 15:16:50,609 | INFO     | current chi2=0.03333167408998716 (change=97.57700531627833 %)
[2025-06-03 11:17:09] 2025-06-03 15:16:50,610 | INFO     | sum of square deviations: 746051197.5
[2025-06-03 11:17:09] 2025-06-03 15:16:50,611 | INFO     | sum of deviations: -5198708011.5
[2025-06-03 11:17:09] 2025-06-03 15:16:50,611 | INFO     | mean x: 1748959698.5
[2025-06-03 11:17:09] 2025-06-03 15:16:50,611 | INFO     | mean y: 2491826.2164179105
[2025-06-03 11:17:09] 2025-06-03 15:16:50,611 | INFO     | -- intersect: 12189766408.511522
[2025-06-03 11:17:09] 2025-06-03 15:16:50,611 | INFO     | intersect: 12189766408.511522
[2025-06-03 11:17:09] 2025-06-03 15:16:50,612 | INFO     | chi2: 0.026962117270445802
[2025-06-03 11:17:09] 2025-06-03 15:16:50,612 | INFO     | current chi2=0.026962117270445802 (change=19.109621684002892 %)
[2025-06-03 11:17:09] 2025-06-03 15:16:50,612 | INFO     | left removable region: 20
[2025-06-03 11:17:09] 2025-06-03 15:16:50,612 | INFO     | sum of square deviations: 509440249.5
[2025-06-03 11:17:09] 2025-06-03 15:16:50,613 | INFO     | sum of deviations: -1093203844.4999995
[2025-06-03 11:17:09] 2025-06-03 15:16:50,613 | INFO     | mean x: 1748959820.5
[2025-06-03 11:17:09] 2025-06-03 15:16:50,614 | INFO     | mean y: 2483631.533898305
[2025-06-03 11:17:09] 2025-06-03 15:16:50,614 | INFO     | -- intersect: 3755562822.9075065
[2025-06-03 11:17:09] 2025-06-03 15:16:50,614 | INFO     | intersect: 3755562822.9075065
[2025-06-03 11:17:09] 2025-06-03 15:16:50,614 | INFO     | chi2: 0.01483091319718279
[2025-06-03 11:17:09] 2025-06-03 15:16:50,614 | INFO     | -- intersect: 3755562822.9075065
[2025-06-03 11:17:09] 2025-06-03 15:16:50,615 | INFO     | current memory leak: -2.15 B/s (using 118 data points, chi2=0.01)
[2025-06-03 11:17:09] 2025-06-03 15:16:50,615 | INFO     | ..............................
[2025-06-03 11:17:09] 2025-06-03 15:16:50,615 | INFO     | . Timing measurements:
[2025-06-03 11:17:09] 2025-06-03 15:16:50,616 | INFO     | . get job = 0 s
[2025-06-03 11:17:09] 2025-06-03 15:16:50,616 | INFO     | . initial setup = 2 s
[2025-06-03 11:17:09] 2025-06-03 15:16:50,616 | INFO     | . payload setup = 6 s
[2025-06-03 11:17:09] 2025-06-03 15:16:50,616 | INFO     | . stage-in = 0 s
[2025-06-03 11:17:09] 2025-06-03 15:16:50,616 | INFO     | . payload execution = 8769 s
[2025-06-03 11:17:09] 2025-06-03 15:16:50,616 | INFO     | . stage-out = 1 s
[2025-06-03 11:17:09] 2025-06-03 15:16:50,617 | INFO     | . log creation = 0 s
[2025-06-03 11:17:09] 2025-06-03 15:16:50,617 | INFO     | ..............................
[2025-06-03 11:17:09] 2025-06-03 15:16:50,776 | INFO     | 
[2025-06-03 11:17:09] 2025-06-03 15:16:50,776 | INFO     | job summary report
[2025-06-03 11:17:09] 2025-06-03 15:16:50,776 | INFO     | --------------------------------------------------
[2025-06-03 11:17:09] 2025-06-03 15:16:50,776 | INFO     | PanDA job id: 6677571516
[2025-06-03 11:17:09] 2025-06-03 15:16:50,776 | INFO     | task id: 45006595
[2025-06-03 11:17:09] 2025-06-03 15:16:50,777 | INFO     | errors: (none)
[2025-06-03 11:17:09] 2025-06-03 15:16:50,777 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:17:09] 2025-06-03 15:16:50,777 | INFO     | pilot state: finished 
[2025-06-03 11:17:09] 2025-06-03 15:16:50,777 | INFO     | transexitcode: 0
[2025-06-03 11:17:09] 2025-06-03 15:16:50,777 | INFO     | exeerrorcode: 0
[2025-06-03 11:17:09] 2025-06-03 15:16:50,777 | INFO     | exeerrordiag: 
[2025-06-03 11:17:09] 2025-06-03 15:16:50,777 | INFO     | exitcode: 0
[2025-06-03 11:17:09] 2025-06-03 15:16:50,778 | INFO     | exitmsg: OK
[2025-06-03 11:17:09] 2025-06-03 15:16:50,778 | INFO     | cpuconsumptiontime: 63475 s
[2025-06-03 11:17:09] 2025-06-03 15:16:50,778 | INFO     | nevents: 400
[2025-06-03 11:17:09] 2025-06-03 15:16:50,778 | INFO     | neventsw: 0
[2025-06-03 11:17:09] 2025-06-03 15:16:50,778 | INFO     | pid: 4687
[2025-06-03 11:17:09] 2025-06-03 15:16:50,778 | INFO     | pgrp: 4687
[2025-06-03 11:17:09] 2025-06-03 15:16:50,778 | INFO     | corecount: 8
[2025-06-03 11:17:09] 2025-06-03 15:16:50,779 | INFO     | event service: False
[2025-06-03 11:17:09] 2025-06-03 15:16:50,779 | INFO     | sizes: {0: 2405184, 1: 2405184, 4: 2405418, 11: 2405446, 8779: 2433194, 8780: 2442135, 8783: 2442319, 8790: 2442489}
[2025-06-03 11:17:09] 2025-06-03 15:16:50,779 | INFO     | --------------------------------------------------
[2025-06-03 11:17:09] 2025-06-03 15:16:50,779 | INFO     | 
[2025-06-03 11:17:09] 2025-06-03 15:16:50,779 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 11:17:09] 2025-06-03 15:16:50,803 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,805 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:17:09] 2025-06-03 15:16:50,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,805 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:17:09] 2025-06-03 15:16:50,805 | INFO     | job 6677571516 has completed (purged errors)
[2025-06-03 11:17:09] 2025-06-03 15:16:50,805 | INFO     | overall cleanup function is called
[2025-06-03 11:17:09] 2025-06-03 15:16:51,812 | INFO     | --- collectZombieJob: --- 10, [4687]
[2025-06-03 11:17:09] 2025-06-03 15:16:51,812 | INFO     | zombie collector waiting for pid 4687
[2025-06-03 11:17:09] 2025-06-03 15:16:51,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:17:09] 2025-06-03 15:16:51,812 | INFO     | collected zombie processes
[2025-06-03 11:17:09] 2025-06-03 15:16:51,812 | INFO     | will attempt to kill all subprocesses of pid=4687
[2025-06-03 11:17:09] 2025-06-03 15:16:51,985 | INFO     | process IDs to be killed: [4687] (in reverse order)
[2025-06-03 11:17:09] 2025-06-03 15:16:52,041 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:17:09] 2025-06-03 15:16:52,041 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:17:09] 2025-06-03 15:16:52,045 | INFO     | did not find any defunct processes belonging to 4687
[2025-06-03 11:17:09] 2025-06-03 15:16:52,048 | INFO     | did not find any defunct processes belonging to 4687
[2025-06-03 11:17:09] 2025-06-03 15:16:52,049 | INFO     | ready for new job
[2025-06-03 11:17:09] 2025-06-03 15:16:52,049 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:17:09] 2025-06-03 15:16:52,050 | INFO     | **************************************
[2025-06-03 11:17:09] 2025-06-03 15:16:52,050 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:17:09] 2025-06-03 15:16:52,050 | INFO     | **************************************
[2025-06-03 11:17:09] 2025-06-03 15:16:52,050 | INFO     | 
[2025-06-03 11:17:09] 2025-06-03 15:16:52,052 | INFO     | architecture information:
[2025-06-03 11:17:09] 2025-06-03 15:16:52,052 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:17:09] 2025-06-03 15:16:52,063 | INFO     | cat /etc/os-release:
[2025-06-03 11:17:09] NAME="CentOS Linux"
[2025-06-03 11:17:09] VERSION="7 (Core)"
[2025-06-03 11:17:09] ID="centos"
[2025-06-03 11:17:09] ID_LIKE="rhel fedora"
[2025-06-03 11:17:09] VERSION_ID="7"
[2025-06-03 11:17:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:17:09] ANSI_COLOR="0;31"
[2025-06-03 11:17:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:17:09] HOME_URL="https://www.centos.org/"
[2025-06-03 11:17:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:17:09] 
[2025-06-03 11:17:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:17:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:17:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:17:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:17:09] 
[2025-06-03 11:17:09] 2025-06-03 15:16:52,063 | INFO     | **************************************
[2025-06-03 11:17:09] 2025-06-03 15:16:52,566 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 11:17:09] 2025-06-03 15:16:52,588 | INFO     | sufficient remaining disk space (55573479424 B)
[2025-06-03 11:17:09] 2025-06-03 15:16:52,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:17:09] 2025-06-03 15:16:52,588 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:17:09] 2025-06-03 15:16:52,588 | INFO     | update_server=False
[2025-06-03 11:17:09] 2025-06-03 15:16:52,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:17:09] 2025-06-03 15:16:52,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:17:09] 2025-06-03 15:16:52,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:17:09] 2025-06-03 15:16:52,589 | INFO     | aborting loop
[2025-06-03 11:17:09] 2025-06-03 15:16:52,590 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 11:17:09] 2025-06-03 15:16:52,590 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:17:09] 2025-06-03 15:16:52,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:17:09] 2025-06-03 15:16:52,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:17:09] 2025-06-03 15:16:53,074 | INFO     | all data control threads have been joined
[2025-06-03 11:17:09] 2025-06-03 15:16:53,557 | INFO     | all payload control threads have been joined
[2025-06-03 11:17:09] 2025-06-03 15:16:53,592 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:17:09] 2025-06-03 15:16:53,595 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:53,595 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:53,596 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:53,712 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:53,842 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:53,985 | INFO     | all job control threads have been joined
[2025-06-03 11:17:09] 2025-06-03 15:16:54,044 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:54,080 | INFO     | [data] control thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:54,388 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:54,432 | INFO     | [job] validate thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:54,551 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:54,563 | INFO     | [payload] control thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:54,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:17:09] 2025-06-03 15:16:54,813 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:54,990 | INFO     | [job] control thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:55,601 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:16:58,570 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:17:02,696 | INFO     | job.realtimelogging is not enabled
[2025-06-03 11:17:09] 2025-06-03 15:17:03,701 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:17:09] 2025-06-03 15:17:04,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140010225755968)>', '<ExcThread(monitor, started 140009424287488)>']
[2025-06-03 11:17:09] 2025-06-03 15:17:04,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:17:09] 2025-06-03 15:17:04,660 | INFO     | [monitor] control thread has ended
[2025-06-03 11:17:09] 2025-06-03 15:17:09,564 | INFO     | all workflow threads have been joined
[2025-06-03 11:17:09] 2025-06-03 15:17:09,564 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:17:09] 2025-06-03 15:17:09,564 | INFO     | traces error code: 0
[2025-06-03 11:17:09] 2025-06-03 15:17:09,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:17:09] 2025-06-03 15:17:09,711 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:17:09] 2025-06-03 15:17:09,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:17:09] 2025-06-03 15:17:09,717 [wrapper] pilotpid: 46719
[2025-06-03 11:17:09] 2025-06-03 15:17:09,719 [wrapper] Pilot exit status: 0
[2025-06-03 11:17:09] 2025-06-03 15:17:09,732 [wrapper] pandaids: 6677571516
[2025-06-03 11:17:09] 2025-06-03 15:17:09,790 [wrapper] cleanup supervisor_pilot 14259 46720
[2025-06-03 11:17:09] 2025-06-03 15:17:09,792 [wrapper] Test setup, not cleaning
[2025-06-03 11:17:09] 2025-06-03 15:17:09,794 [wrapper] apfmon messages muted
[2025-06-03 11:17:09] 2025-06-03 15:17:09,797 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:17:09] 2025-06-03 15:17:09,799 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:17:09]  *** Error codes and diagnostics ***
[2025-06-03 11:17:09]     "exeErrorCode": 0,
[2025-06-03 11:17:09]     "exeErrorDiag": "",
[2025-06-03 11:17:09]     "pilotErrorCode": 0,
[2025-06-03 11:17:09]     "pilotErrorDiag": "",
[2025-06-03 11:17:09]  *** Listing of results directory ***
[2025-06-03 11:17:09] total 388716
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 05:56 pilot3.tar.gz
[2025-06-03 11:17:09] -rwx------ 1 boincer umatlas     37140 Jun  3 06:02 runpilot2-wrapper.sh
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 06:02 queuedata.json
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas       100 Jun  3 08:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:17:09] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 08:49 run_atlas
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas       105 Jun  3 08:49 job.xml
[2025-06-03 11:17:09] -rw-r--r-- 2 boincer umatlas 212897648 Jun  3 08:49 EVNT.45006593._001123.pool.root.1
[2025-06-03 11:17:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 08:49 start_atlas.sh
[2025-06-03 11:17:09] drwxrwx--x 2 boincer umatlas      4096 Jun  3 08:49 shared
[2025-06-03 11:17:09] -rw-r--r-- 2 boincer umatlas    508879 Jun  3 08:49 input.tar.gz
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas         0 Jun  3 08:49 boinc_lockfile
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 08:49 pandaJob.out
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas    982724 Jun  3 08:50 agis_schedconf.cvmfs.json
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas   1603667 Jun  3 08:50 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:17:09] drwx------ 4 boincer umatlas      4096 Jun  3 08:50 pilot3
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas      6035 Jun  3 11:11 init_data.xml
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas 178986999 Jun  3 11:16 HITS.45006595._028098.pool.root.1
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas        95 Jun  3 11:16 pilot_heartbeat.json
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas       530 Jun  3 11:16 boinc_task_state.xml
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas      1062 Jun  3 11:16 memory_monitor_summary.json
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas    358575 Jun  3 11:16 log.45006595._028098.job.log.tgz.1
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas      7733 Jun  3 11:16 heartbeat.json
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 11:16 boinc_mmap_file
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas        27 Jun  3 11:16 wrapper_checkpoint.txt
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas      4548 Jun  3 11:17 pilotlog.txt
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas    805891 Jun  3 11:17 log.45006595._028098.job.log.1
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas       357 Jun  3 11:17 output.list
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas       620 Jun  3 11:17 runtime_log
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas   1187840 Jun  3 11:17 result.tar.gz
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas       659 Jun  3 11:17 XEoMDmvedg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPMjKDmmV8fWm.diag
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 11:17 runtime_log.err
[2025-06-03 11:17:09] -rw-r--r-- 1 boincer umatlas     21125 Jun  3 11:17 stderr.txt
[2025-06-03 11:17:09] HITS file was successfully produced:
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas 178986999 Jun  3 11:16 shared/HITS.pool.root.1
[2025-06-03 11:17:09]  *** Contents of shared directory: ***
[2025-06-03 11:17:09] total 384384
[2025-06-03 11:17:09] -rw-r--r-- 2 boincer umatlas 212897648 Jun  3 08:49 ATLAS.root_0
[2025-06-03 11:17:09] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 08:49 start_atlas.sh
[2025-06-03 11:17:09] -rw-r--r-- 2 boincer umatlas    508879 Jun  3 08:49 input.tar.gz
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas 178986999 Jun  3 11:16 HITS.pool.root.1
[2025-06-03 11:17:09] -rw------- 1 boincer umatlas   1187840 Jun  3 11:17 result.tar.gz
11:17:11 (43121): run_atlas exited; CPU time 63669.089601
11:17:11 (43121): called boinc_finish(0)

</stderr_txt>
]]>

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