Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:17:01 (13182): wrapper (7.7.26015): starting
22:17:01 (13182): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 22:17:01] Arguments: --nthreads 8
[2025-06-03 22:17:01] Threads: 8
[2025-06-03 22:17:01] Checking for CVMFS
[2025-06-03 22:17:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:17:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:17:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:17:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:17:02] 2.11.2.0 16765 32252 92020 146754 3 114 13691675 25165825 3359 130560 0 15391860 99.777 19041421 2059 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 22:17:02] CVMFS is ok
[2025-06-03 22:17:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:17:02] Checking for apptainer binary...
[2025-06-03 22:17:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:17:02] Running /usr/bin/apptainer --version
[2025-06-03 22:17:02] apptainer version 1.3.2-1.el7
[2025-06-03 22:17:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:17:04] cg-vwn404.simple-grid.lan
[2025-06-03 22:17:04] apptainer works
[2025-06-03 22:17:04] Set ATHENA_PROC_NUMBER=8
[2025-06-03 22:17:04] Set ATHENA_CORE_NUMBER=8
[2025-06-03 22:17:04] Starting ATLAS job with PandaID=6677574084
[2025-06-03 22:17:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:28:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:28:05] 2025-06-04 00:01:50,431 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677574084/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:28:05] 2025-06-04 00:01:50,432 | INFO     | extracted standard info from prmon json
[2025-06-04 02:28:05] 2025-06-04 00:01:50,432 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:28:05] 2025-06-04 00:01:50,432 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:28:05] 2025-06-04 00:01:50,433 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:28:05] 2025-06-04 00:01:50,433 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:28:05] 2025-06-04 00:01:50,456 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:28:05] 2025-06-04 00:01:50,456 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,458 | INFO     | sum of deviations: 27592914399.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,458 | INFO     | mean x: 1748988552.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,459 | INFO     | mean y: 2453699.1963470317
[2025-06-04 02:28:05] 2025-06-04 00:01:50,459 | INFO     | -- intersect: -14815315543.155478
[2025-06-04 02:28:05] 2025-06-04 00:01:50,459 | INFO     | intersect: -14815315543.155478
[2025-06-04 02:28:05] 2025-06-04 00:01:50,459 | INFO     | chi2: 2.2897905393592213
[2025-06-04 02:28:05] 2025-06-04 00:01:50,460 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 02:28:05] 2025-06-04 00:01:50,468 | INFO     | sum of deviations: 40844028213.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,469 | INFO     | mean x: 1748988399.5
[2025-06-04 02:28:05] 2025-06-04 00:01:50,469 | INFO     | mean y: 2462781.7196261683
[2025-06-04 02:28:05] 2025-06-04 00:01:50,469 | INFO     | -- intersect: -23504971777.49293
[2025-06-04 02:28:05] 2025-06-04 00:01:50,469 | INFO     | intersect: -23504971777.49293
[2025-06-04 02:28:05] 2025-06-04 00:01:50,469 | INFO     | chi2: 1.5175490176457924
[2025-06-04 02:28:05] 2025-06-04 00:01:50,470 | INFO     | current chi2=1.5175490176457924 (change=33.725421973729276 %)
[2025-06-04 02:28:05] 2025-06-04 00:01:50,470 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,472 | INFO     | sum of deviations: 39534290930.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,472 | INFO     | mean x: 1748988247.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,472 | INFO     | mean y: 2461821.6028708136
[2025-06-04 02:28:05] 2025-06-04 00:01:50,472 | INFO     | -- intersect: -24423602993.95071
[2025-06-04 02:28:05] 2025-06-04 00:01:50,472 | INFO     | intersect: -24423602993.95071
[2025-06-04 02:28:05] 2025-06-04 00:01:50,472 | INFO     | chi2: 1.5182253802544694
[2025-06-04 02:28:05] 2025-06-04 00:01:50,473 | INFO     | current chi2=1.5182253802544694 (change=-0.04456940769704032 %)
[2025-06-04 02:28:05] 2025-06-04 00:01:50,473 | INFO     | right removable region: 208
[2025-06-04 02:28:05] 2025-06-04 00:01:50,473 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 02:28:05] 2025-06-04 00:01:50,475 | INFO     | sum of deviations: -7670474615.499998
[2025-06-04 02:28:05] 2025-06-04 00:01:50,482 | INFO     | mean x: 1748988704.5
[2025-06-04 02:28:05] 2025-06-04 00:01:50,482 | INFO     | mean y: 2478134.1355140186
[2025-06-04 02:28:05] 2025-06-04 00:01:50,482 | INFO     | -- intersect: 4417155613.198768
[2025-06-04 02:28:05] 2025-06-04 00:01:50,483 | INFO     | intersect: 4417155613.198768
[2025-06-04 02:28:05] 2025-06-04 00:01:50,483 | INFO     | chi2: 0.802117885474776
[2025-06-04 02:28:05] 2025-06-04 00:01:50,483 | INFO     | current chi2=0.802117885474776 (change=64.96981397699189 %)
[2025-06-04 02:28:05] 2025-06-04 00:01:50,483 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,485 | INFO     | sum of deviations: -8135522359.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,485 | INFO     | mean x: 1748988857.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,485 | INFO     | mean y: 2478486.5071770335
[2025-06-04 02:28:05] 2025-06-04 00:01:50,485 | INFO     | -- intersect: 5028972223.524962
[2025-06-04 02:28:05] 2025-06-04 00:01:50,486 | INFO     | intersect: 5028972223.524962
[2025-06-04 02:28:05] 2025-06-04 00:01:50,486 | INFO     | chi2: 0.7924628602506452
[2025-06-04 02:28:05] 2025-06-04 00:01:50,486 | INFO     | current chi2=0.7924628602506452 (change=1.2036915519488791 %)
[2025-06-04 02:28:05] 2025-06-04 00:01:50,486 | INFO     | left removable region: 20
[2025-06-04 02:28:05] 2025-06-04 00:01:50,487 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,488 | INFO     | sum of deviations: 3060119350.9999995
[2025-06-04 02:28:05] 2025-06-04 00:01:50,488 | INFO     | mean x: 1748988826.5
[2025-06-04 02:28:05] 2025-06-04 00:01:50,488 | INFO     | mean y: 2489685.329787234
[2025-06-04 02:28:05] 2025-06-04 00:01:50,488 | INFO     | -- intersect: -2595190706.8127728
[2025-06-04 02:28:05] 2025-06-04 00:01:50,488 | INFO     | intersect: -2595190706.8127728
[2025-06-04 02:28:05] 2025-06-04 00:01:50,489 | INFO     | chi2: 0.00010125576792111163
[2025-06-04 02:28:05] 2025-06-04 00:01:50,489 | INFO     | -- intersect: -2595190706.8127728
[2025-06-04 02:28:05] 2025-06-04 00:01:50,489 | INFO     | current memory leak: 1.49 B/s (using 188 data points, chi2=0.00)
[2025-06-04 02:28:05] 2025-06-04 00:01:50,490 | INFO     | ..............................
[2025-06-04 02:28:05] 2025-06-04 00:01:50,490 | INFO     | . Timing measurements:
[2025-06-04 02:28:05] 2025-06-04 00:01:50,490 | INFO     | . get job = 0 s
[2025-06-04 02:28:05] 2025-06-04 00:01:50,490 | INFO     | . initial setup = 2 s
[2025-06-04 02:28:05] 2025-06-04 00:01:50,490 | INFO     | . payload setup = 14 s
[2025-06-04 02:28:05] 2025-06-04 00:01:50,490 | INFO     | . stage-in = 0 s
[2025-06-04 02:28:05] 2025-06-04 00:01:50,490 | INFO     | . payload execution = 13327 s
[2025-06-04 02:28:05] 2025-06-04 00:01:50,491 | INFO     | . stage-out = 4 s
[2025-06-04 02:28:05] 2025-06-04 00:01:50,491 | INFO     | . log creation = 1 s
[2025-06-04 02:28:05] 2025-06-04 00:01:50,491 | INFO     | ..............................
[2025-06-04 02:28:05] 2025-06-04 00:01:50,978 | INFO     | 
[2025-06-04 02:28:05] 2025-06-04 00:01:50,978 | INFO     | job summary report
[2025-06-04 02:28:05] 2025-06-04 00:01:50,978 | INFO     | --------------------------------------------------
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | PanDA job id: 6677574084
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | task id: 45006595
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | errors: (none)
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | pilot state: finished 
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | transexitcode: 0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | exeerrorcode: 0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | exeerrordiag: 
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | exitcode: 0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | exitmsg: OK
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | cpuconsumptiontime: 50442 s
[2025-06-04 02:28:05] 2025-06-04 00:01:50,979 | INFO     | nevents: 400
[2025-06-04 02:28:05] 2025-06-04 00:01:50,980 | INFO     | neventsw: 0
[2025-06-04 02:28:05] 2025-06-04 00:01:50,980 | INFO     | pid: 25479
[2025-06-04 02:28:05] 2025-06-04 00:01:50,980 | INFO     | pgrp: 25479
[2025-06-04 02:28:05] 2025-06-04 00:01:50,980 | INFO     | corecount: 8
[2025-06-04 02:28:05] 2025-06-04 00:01:50,980 | INFO     | event service: False
[2025-06-04 02:28:05] 2025-06-04 00:01:50,980 | INFO     | sizes: {0: 2404957, 1: 2405212, 9: 2405418, 12: 2405446, 13346: 2435045, 13351: 2443986, 13352: 2444170, 13444: 2444340}
[2025-06-04 02:28:05] 2025-06-04 00:01:50,980 | INFO     | --------------------------------------------------
[2025-06-04 02:28:05] 2025-06-04 00:01:50,980 | INFO     | 
[2025-06-04 02:28:05] 2025-06-04 00:01:50,980 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 02:28:05] 2025-06-04 00:01:51,547 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,547 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,547 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,547 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,547 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,547 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,547 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,548 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:28:05] 2025-06-04 00:01:51,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,549 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:28:05] 2025-06-04 00:01:51,549 | INFO     | job 6677574084 has completed (purged errors)
[2025-06-04 02:28:05] 2025-06-04 00:01:51,549 | INFO     | overall cleanup function is called
[2025-06-04 02:28:05] 2025-06-04 00:01:52,558 | INFO     | --- collectZombieJob: --- 10, [25479]
[2025-06-04 02:28:05] 2025-06-04 00:01:52,558 | INFO     | zombie collector waiting for pid 25479
[2025-06-04 02:28:05] 2025-06-04 00:01:52,558 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:28:05] 2025-06-04 00:01:52,559 | INFO     | collected zombie processes
[2025-06-04 02:28:05] 2025-06-04 00:01:52,559 | INFO     | will attempt to kill all subprocesses of pid=25479
[2025-06-04 02:28:05] 2025-06-04 00:01:52,672 | INFO     | process IDs to be killed: [25479] (in reverse order)
[2025-06-04 02:28:05] 2025-06-04 00:01:53,234 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:28:05] 2025-06-04 00:01:53,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:28:05] 2025-06-04 00:01:53,238 | INFO     | did not find any defunct processes belonging to 25479
[2025-06-04 02:28:05] 2025-06-04 00:01:53,241 | INFO     | did not find any defunct processes belonging to 25479
[2025-06-04 02:28:05] 2025-06-04 00:01:53,241 | INFO     | ready for new job
[2025-06-04 02:28:05] 2025-06-04 00:01:53,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:28:05] 2025-06-04 00:01:53,243 | INFO     | **************************************
[2025-06-04 02:28:05] 2025-06-04 00:01:53,243 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:28:05] 2025-06-04 00:01:53,243 | INFO     | **************************************
[2025-06-04 02:28:05] 2025-06-04 00:01:53,244 | INFO     | 
[2025-06-04 02:28:05] 2025-06-04 00:01:53,247 | INFO     | pilot is running in a VM
[2025-06-04 02:28:05] 2025-06-04 00:01:53,247 | INFO     | architecture information:
[2025-06-04 02:28:05] 2025-06-04 00:01:53,259 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:28:05] 2025-06-04 00:01:53,552 | INFO     | cat /etc/os-release:
[2025-06-04 02:28:05] NAME="CentOS Linux"
[2025-06-04 02:28:05] VERSION="7 (Core)"
[2025-06-04 02:28:05] ID="centos"
[2025-06-04 02:28:05] ID_LIKE="rhel fedora"
[2025-06-04 02:28:05] VERSION_ID="7"
[2025-06-04 02:28:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:28:05] ANSI_COLOR="0;31"
[2025-06-04 02:28:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:28:05] HOME_URL="https://www.centos.org/"
[2025-06-04 02:28:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:28:05] 
[2025-06-04 02:28:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:28:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:28:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:28:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:28:05] 
[2025-06-04 02:28:05] 2025-06-04 00:01:53,553 | INFO     | **************************************
[2025-06-04 02:28:05] 2025-06-04 00:01:54,056 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 02:28:05] 2025-06-04 00:01:54,212 | INFO     | sufficient remaining disk space (496932749312 B)
[2025-06-04 02:28:05] 2025-06-04 00:01:54,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:28:05] 2025-06-04 00:01:54,213 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:28:05] 2025-06-04 00:01:54,213 | INFO     | update_server=False
[2025-06-04 02:28:05] 2025-06-04 00:01:54,213 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:28:05] 2025-06-04 00:01:54,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:28:05] 2025-06-04 00:01:54,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:28:05] 2025-06-04 00:01:54,214 | INFO     | aborting loop
[2025-06-04 02:28:05] 2025-06-04 00:01:54,669 | INFO     | all job control threads have been joined
[2025-06-04 02:28:05] 2025-06-04 00:01:54,940 | INFO     | all data control threads have been joined
[2025-06-04 02:28:05] 2025-06-04 00:01:55,023 | INFO     | all payload control threads have been joined
[2025-06-04 02:28:05] 2025-06-04 00:01:55,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:28:05] 2025-06-04 00:01:55,128 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:28:05] 2025-06-04 00:01:55,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:28:05] 2025-06-04 00:01:55,129 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:28:05] 2025-06-04 00:01:55,219 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:55,220 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:55,523 | INFO     | [job] validate thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:55,551 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:55,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:28:05] 2025-06-04 00:01:55,675 | INFO     | [job] control thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:55,855 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:55,946 | INFO     | [data] control thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:56,004 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:56,029 | INFO     | [payload] control thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:56,220 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:56,523 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:56,539 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:56,601 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:56,678 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:56,693 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:01:59,107 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:28:05] 2025-06-04 00:02:01,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139765355796288)>', '<ExcThread(monitor, started 139765064128256)>']
[2025-06-04 02:28:05] 2025-06-04 00:02:01,164 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:28:05] 2025-06-04 00:02:01,164 | INFO     | [monitor] control thread has ended
[2025-06-04 02:28:05] 2025-06-04 00:02:06,065 | INFO     | all workflow threads have been joined
[2025-06-04 02:28:05] 2025-06-04 00:02:06,065 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:28:05] 2025-06-04 00:02:06,066 | INFO     | traces error code: 0
[2025-06-04 02:28:05] 2025-06-04 00:02:06,066 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:28:05] 2025-06-04 00:02:06,464 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:28:05] 2025-06-04 00:02:06,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:28:05] 2025-06-04 00:02:06,678 [wrapper] pilotpid: 16924
[2025-06-04 02:28:05] 2025-06-04 00:02:06,781 [wrapper] Pilot exit status: 0
[2025-06-04 02:28:05] 2025-06-04 00:02:07,245 [wrapper] pandaids: 6677574084
[2025-06-04 02:28:05] 2025-06-04 00:02:08,291 [wrapper] cleanup supervisor_pilot 29326 16925
[2025-06-04 02:28:05] 2025-06-04 00:02:08,343 [wrapper] Test setup, not cleaning
[2025-06-04 02:28:05] 2025-06-04 00:02:08,449 [wrapper] apfmon messages muted
[2025-06-04 02:28:05] 2025-06-04 00:02:08,530 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:28:05] 2025-06-04 00:02:08,655 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:28:05]  *** Error codes and diagnostics ***
[2025-06-04 02:28:05]     "exeErrorCode": 0,
[2025-06-04 02:28:05]     "exeErrorDiag": "",
[2025-06-04 02:28:05]     "pilotErrorCode": 0,
[2025-06-04 02:28:05]     "pilotErrorDiag": "",
[2025-06-04 02:28:05]  *** Listing of results directory ***
[2025-06-04 02:28:05] total 392632
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc    495897 Jun  3 11:56 pilot3.tar.gz
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc      5111 Jun  3 12:07 queuedata.json
[2025-06-04 02:28:05] -rwx------. 1 boinc boinc     37140 Jun  3 12:09 runpilot2-wrapper.sh
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc       100 Jun  3 22:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:28:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 22:17 run_atlas
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc       105 Jun  3 22:17 job.xml
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc      6392 Jun  3 22:17 init_data.xml
[2025-06-04 02:28:05] -rw-r--r--. 2 boinc boinc 215270564 Jun  3 22:17 EVNT.45006593._001138.pool.root.1
[2025-06-04 02:28:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:17 start_atlas.sh
[2025-06-04 02:28:05] drwxrwx--x. 2 boinc boinc        68 Jun  3 22:17 shared
[2025-06-04 02:28:05] -rw-r--r--. 2 boinc boinc    508881 Jun  3 22:17 input.tar.gz
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc         0 Jun  3 22:17 boinc_lockfile
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc      2525 Jun  3 22:17 pandaJob.out
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc    986893 Jun  3 22:17 agis_schedconf.cvmfs.json
[2025-06-04 02:28:05] drwx------. 4 boinc boinc      4096 Jun  3 22:17 pilot3
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc 179870184 Jun  4 01:58 HITS.45006595._028454.pool.root.1
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc       530 Jun  4 01:59 boinc_task_state.xml
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc      1017 Jun  4 02:00 memory_monitor_summary.json
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc   1603667 Jun  4 02:00 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc    372130 Jun  4 02:00 log.45006595._028454.job.log.tgz.1
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc        95 Jun  4 02:01 pilot_heartbeat.json
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc      7683 Jun  4 02:01 heartbeat.json
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc      4416 Jun  4 02:02 pilotlog.txt
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc   1173196 Jun  4 02:02 log.45006595._028454.job.log.1
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc       357 Jun  4 02:02 output.list
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc       620 Jun  4 02:02 runtime_log
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc   1566720 Jun  4 02:02 result.tar.gz
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc      8659 Jun  4 02:02 runtime_log.err
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc       657 Jun  4 02:02 lOwMDmDldg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRPjKDmXia45m.diag
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc      8192 Jun  4 02:28 boinc_mmap_file
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc        28 Jun  4 02:28 wrapper_checkpoint.txt
[2025-06-04 02:28:05] -rw-r--r--. 1 boinc boinc     20488 Jun  4 02:28 stderr.txt
[2025-06-04 02:28:05] HITS file was successfully produced:
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc 179870184 Jun  4 01:58 shared/HITS.pool.root.1
[2025-06-04 02:28:05]  *** Contents of shared directory: ***
[2025-06-04 02:28:05] total 387932
[2025-06-04 02:28:05] -rw-r--r--. 2 boinc boinc 215270564 Jun  3 22:17 ATLAS.root_0
[2025-06-04 02:28:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:17 start_atlas.sh
[2025-06-04 02:28:05] -rw-r--r--. 2 boinc boinc    508881 Jun  3 22:17 input.tar.gz
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc 179870184 Jun  4 01:58 HITS.pool.root.1
[2025-06-04 02:28:05] -rw-------. 1 boinc boinc   1566720 Jun  4 02:02 result.tar.gz
02:28:07 (13182): run_atlas exited; CPU time 50616.867842
02:28:07 (13182): called boinc_finish(0)

</stderr_txt>
]]>

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