Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:13:35 (10595): wrapper (7.7.26015): starting
22:13:35 (10595): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 22:13:35] Arguments: --nthreads 8
[2025-06-03 22:13:35] Threads: 8
[2025-06-03 22:13:35] Checking for CVMFS
[2025-06-03 22:13:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:13:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:13:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:13:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:13:38] 2.11.2.0 3740 32379 98172 146754 1 16 19524167 25165824 3891 130560 0 17602971 99.808 18807670 2202 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 22:13:38] CVMFS is ok
[2025-06-03 22:13:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:13:38] Checking for apptainer binary...
[2025-06-03 22:13:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:13:38] Running /usr/bin/apptainer --version
[2025-06-03 22:13:38] apptainer version 1.3.2-1.el7
[2025-06-03 22:13:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:44:33] cg-vwn234.simple-grid.lan
[2025-06-03 22:44:33] apptainer works
[2025-06-03 22:44:33] Set ATHENA_PROC_NUMBER=8
[2025-06-03 22:44:33] Set ATHENA_CORE_NUMBER=8
[2025-06-03 22:44:33] Starting ATLAS job with PandaID=6677553013
[2025-06-03 22:44:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:49:49]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:49:49] 2025-06-04 00:48:35,992 | INFO     | extracted standard info from prmon json
[2025-06-04 02:49:49] 2025-06-04 00:48:35,992 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:49:49] 2025-06-04 00:48:35,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:49:49] 2025-06-04 00:48:35,992 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:49:49] 2025-06-04 00:48:35,992 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:49:49] 2025-06-04 00:48:36,001 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:49:49] 2025-06-04 00:48:36,002 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,004 | INFO     | sum of deviations: 42812243720.999985
[2025-06-04 02:49:49] 2025-06-04 00:48:36,004 | INFO     | mean x: 1748991073.0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,004 | INFO     | mean y: 2466497.59030837
[2025-06-04 02:49:49] 2025-06-04 00:48:36,004 | INFO     | -- intersect: -20642206802.6444
[2025-06-04 02:49:49] 2025-06-04 00:48:36,004 | INFO     | intersect: -20642206802.6444
[2025-06-04 02:49:49] 2025-06-04 00:48:36,005 | INFO     | chi2: 7.225191899977745
[2025-06-04 02:49:49] 2025-06-04 00:48:36,005 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 02:49:49] 2025-06-04 00:48:36,007 | INFO     | sum of deviations: 57180340368.99999
[2025-06-04 02:49:49] 2025-06-04 00:48:36,007 | INFO     | mean x: 1748990920.5
[2025-06-04 02:49:49] 2025-06-04 00:48:36,007 | INFO     | mean y: 2475669.6486486485
[2025-06-04 02:49:49] 2025-06-04 00:48:36,007 | INFO     | -- intersect: -29476049790.957912
[2025-06-04 02:49:49] 2025-06-04 00:48:36,007 | INFO     | intersect: -29476049790.957912
[2025-06-04 02:49:49] 2025-06-04 00:48:36,008 | INFO     | chi2: 6.520970888903721
[2025-06-04 02:49:49] 2025-06-04 00:48:36,008 | INFO     | current chi2=6.520970888903721 (change=9.746744734575062 %)
[2025-06-04 02:49:49] 2025-06-04 00:48:36,008 | INFO     | right removable region: 221
[2025-06-04 02:49:49] 2025-06-04 00:48:36,009 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 02:49:49] 2025-06-04 00:48:36,011 | INFO     | sum of deviations: -36044294697.0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,011 | INFO     | mean x: 1748991225.5
[2025-06-04 02:49:49] 2025-06-04 00:48:36,011 | INFO     | mean y: 2517747.873873874
[2025-06-04 02:49:49] 2025-06-04 00:48:36,011 | INFO     | -- intersect: 18584653449.924927
[2025-06-04 02:49:49] 2025-06-04 00:48:36,011 | INFO     | intersect: 18584653449.924927
[2025-06-04 02:49:49] 2025-06-04 00:48:36,013 | INFO     | chi2: 2.3819066224243617
[2025-06-04 02:49:49] 2025-06-04 00:48:36,013 | INFO     | current chi2=2.3819066224243617 (change=67.03330990514317 %)
[2025-06-04 02:49:49] 2025-06-04 00:48:36,013 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,015 | INFO     | sum of deviations: -73273807072.00002
[2025-06-04 02:49:49] 2025-06-04 00:48:36,015 | INFO     | mean x: 1748991378.0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,016 | INFO     | mean y: 2542912.400921659
[2025-06-04 02:49:49] 2025-06-04 00:48:36,016 | INFO     | -- intersect: 40449701947.12624
[2025-06-04 02:49:49] 2025-06-04 00:48:36,016 | INFO     | intersect: 40449701947.12624
[2025-06-04 02:49:49] 2025-06-04 00:48:36,016 | INFO     | chi2: 1.03482055859801
[2025-06-04 02:49:49] 2025-06-04 00:48:36,016 | INFO     | current chi2=1.03482055859801 (change=56.55494850823561 %)
[2025-06-04 02:49:49] 2025-06-04 00:48:36,017 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,019 | INFO     | sum of deviations: -73801351908.0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,019 | INFO     | mean x: 1748991530.5
[2025-06-04 02:49:49] 2025-06-04 00:48:36,019 | INFO     | mean y: 2543251.603773585
[2025-06-04 02:49:49] 2025-06-04 00:48:36,019 | INFO     | -- intersect: 43691902983.0805
[2025-06-04 02:49:49] 2025-06-04 00:48:36,019 | INFO     | intersect: 43691902983.0805
[2025-06-04 02:49:49] 2025-06-04 00:48:36,020 | INFO     | chi2: 1.006611139066346
[2025-06-04 02:49:49] 2025-06-04 00:48:36,020 | INFO     | current chi2=1.006611139066346 (change=2.726020400085841 %)
[2025-06-04 02:49:49] 2025-06-04 00:48:36,020 | INFO     | left removable region: 30
[2025-06-04 02:49:49] 2025-06-04 00:48:36,020 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,025 | INFO     | sum of deviations: -39855600744.000015
[2025-06-04 02:49:49] 2025-06-04 00:48:36,025 | INFO     | mean x: 1748991805.0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,025 | INFO     | mean y: 2540399.623036649
[2025-06-04 02:49:49] 2025-06-04 00:48:36,026 | INFO     | -- intersect: 32265968689.173515
[2025-06-04 02:49:49] 2025-06-04 00:48:36,026 | INFO     | intersect: 32265968689.173515
[2025-06-04 02:49:49] 2025-06-04 00:48:36,026 | INFO     | chi2: 0.19665551955069419
[2025-06-04 02:49:49] 2025-06-04 00:48:36,026 | INFO     | -- intersect: 32265968689.173515
[2025-06-04 02:49:49] 2025-06-04 00:48:36,026 | INFO     | current memory leak: -18.45 B/s (using 191 data points, chi2=0.20)
[2025-06-04 02:49:49] 2025-06-04 00:48:36,027 | INFO     | ..............................
[2025-06-04 02:49:49] 2025-06-04 00:48:36,027 | INFO     | . Timing measurements:
[2025-06-04 02:49:49] 2025-06-04 00:48:36,027 | INFO     | . get job = 0 s
[2025-06-04 02:49:49] 2025-06-04 00:48:36,027 | INFO     | . initial setup = 9 s
[2025-06-04 02:49:49] 2025-06-04 00:48:36,027 | INFO     | . payload setup = 177 s
[2025-06-04 02:49:49] 2025-06-04 00:48:36,028 | INFO     | . stage-in = 0 s
[2025-06-04 02:49:49] 2025-06-04 00:48:36,028 | INFO     | . payload execution = 13983 s
[2025-06-04 02:49:49] 2025-06-04 00:48:36,028 | INFO     | . stage-out = 4 s
[2025-06-04 02:49:49] 2025-06-04 00:48:36,028 | INFO     | . log creation = 1 s
[2025-06-04 02:49:49] 2025-06-04 00:48:36,028 | INFO     | ..............................
[2025-06-04 02:49:49] 2025-06-04 00:48:36,301 | INFO     | 
[2025-06-04 02:49:49] 2025-06-04 00:48:36,301 | INFO     | job summary report
[2025-06-04 02:49:49] 2025-06-04 00:48:36,301 | INFO     | --------------------------------------------------
[2025-06-04 02:49:49] 2025-06-04 00:48:36,301 | INFO     | PanDA job id: 6677553013
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | task id: 45006595
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | errors: (none)
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | pilot state: finished 
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | transexitcode: 0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | exeerrorcode: 0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | exeerrordiag: 
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | exitcode: 0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | exitmsg: OK
[2025-06-04 02:49:49] 2025-06-04 00:48:36,302 | INFO     | cpuconsumptiontime: 51580 s
[2025-06-04 02:49:49] 2025-06-04 00:48:36,303 | INFO     | nevents: 400
[2025-06-04 02:49:49] 2025-06-04 00:48:36,303 | INFO     | neventsw: 0
[2025-06-04 02:49:49] 2025-06-04 00:48:36,303 | INFO     | pid: 9220
[2025-06-04 02:49:49] 2025-06-04 00:48:36,303 | INFO     | pgrp: 9220
[2025-06-04 02:49:49] 2025-06-04 00:48:36,303 | INFO     | corecount: 8
[2025-06-04 02:49:49] 2025-06-04 00:48:36,303 | INFO     | event service: False
[2025-06-04 02:49:49] 2025-06-04 00:48:36,303 | INFO     | sizes: {0: 2404356, 1: 2405042, 2: 2405241, 13: 2405241, 23: 2405297, 34: 2405325, 45: 2405481, 55: 2405509, 66: 2405537, 77: 2405565, 88: 2405621, 92: 2406135, 98
[2025-06-04 02:49:49] 2025-06-04 00:48:36,303 | INFO     | --------------------------------------------------
[2025-06-04 02:49:49] 2025-06-04 00:48:36,303 | INFO     | 
[2025-06-04 02:49:49] 2025-06-04 00:48:36,304 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-04 02:49:49] 2025-06-04 00:48:36,404 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,405 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,405 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,405 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:49:49] 2025-06-04 00:48:36,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:49:49] 2025-06-04 00:48:36,407 | INFO     | job 6677553013 has completed (purged errors)
[2025-06-04 02:49:49] 2025-06-04 00:48:36,407 | INFO     | overall cleanup function is called
[2025-06-04 02:49:49] 2025-06-04 00:48:37,417 | INFO     | --- collectZombieJob: --- 10, [9220]
[2025-06-04 02:49:49] 2025-06-04 00:48:37,417 | INFO     | zombie collector waiting for pid 9220
[2025-06-04 02:49:49] 2025-06-04 00:48:37,417 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:49:49] 2025-06-04 00:48:37,417 | INFO     | collected zombie processes
[2025-06-04 02:49:49] 2025-06-04 00:48:37,418 | INFO     | will attempt to kill all subprocesses of pid=9220
[2025-06-04 02:49:49] 2025-06-04 00:48:37,534 | INFO     | process IDs to be killed: [9220] (in reverse order)
[2025-06-04 02:49:49] 2025-06-04 00:48:37,608 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:49:49] 2025-06-04 00:48:37,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:49:49] 2025-06-04 00:48:37,612 | INFO     | did not find any defunct processes belonging to 9220
[2025-06-04 02:49:49] 2025-06-04 00:48:37,616 | INFO     | did not find any defunct processes belonging to 9220
[2025-06-04 02:49:49] 2025-06-04 00:48:37,617 | INFO     | ready for new job
[2025-06-04 02:49:49] 2025-06-04 00:48:37,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:49:49] 2025-06-04 00:48:37,619 | INFO     | **************************************
[2025-06-04 02:49:49] 2025-06-04 00:48:37,619 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:49:49] 2025-06-04 00:48:37,619 | INFO     | **************************************
[2025-06-04 02:49:49] 2025-06-04 00:48:37,619 | INFO     | 
[2025-06-04 02:49:49] 2025-06-04 00:48:37,620 | INFO     | pilot is running in a VM
[2025-06-04 02:49:49] 2025-06-04 00:48:37,620 | INFO     | architecture information:
[2025-06-04 02:49:49] 2025-06-04 00:48:37,621 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:49:49] 2025-06-04 00:48:37,649 | INFO     | cat /etc/os-release:
[2025-06-04 02:49:49] NAME="CentOS Linux"
[2025-06-04 02:49:49] VERSION="7 (Core)"
[2025-06-04 02:49:49] ID="centos"
[2025-06-04 02:49:49] ID_LIKE="rhel fedora"
[2025-06-04 02:49:49] VERSION_ID="7"
[2025-06-04 02:49:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:49:49] ANSI_COLOR="0;31"
[2025-06-04 02:49:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:49:49] HOME_URL="https://www.centos.org/"
[2025-06-04 02:49:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:49:49] 
[2025-06-04 02:49:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:49:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:49:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:49:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:49:49] 
[2025-06-04 02:49:49] 2025-06-04 00:48:37,649 | INFO     | **************************************
[2025-06-04 02:49:49] 2025-06-04 00:48:38,154 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-04 02:49:49] 2025-06-04 00:48:38,224 | INFO     | sufficient remaining disk space (496834183168 B)
[2025-06-04 02:49:49] 2025-06-04 00:48:38,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:49:49] 2025-06-04 00:48:38,225 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:49:49] 2025-06-04 00:48:38,225 | INFO     | update_server=False
[2025-06-04 02:49:49] 2025-06-04 00:48:38,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:49:49] 2025-06-04 00:48:38,226 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:49:49] 2025-06-04 00:48:38,226 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:49:49] 2025-06-04 00:48:38,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:49:49] 2025-06-04 00:48:38,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:49:49] 2025-06-04 00:48:38,229 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:49:49] 2025-06-04 00:48:38,229 | INFO     | aborting loop
[2025-06-04 02:49:49] 2025-06-04 00:48:38,534 | INFO     | all job control threads have been joined
[2025-06-04 02:49:49] 2025-06-04 00:48:38,597 | INFO     | all data control threads have been joined
[2025-06-04 02:49:49] 2025-06-04 00:48:38,604 | INFO     | all payload control threads have been joined
[2025-06-04 02:49:49] 2025-06-04 00:48:39,072 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:49:49] 2025-06-04 00:48:39,231 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,235 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,259 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,540 | INFO     | [job] control thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,575 | INFO     | [job] validate thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,603 | INFO     | [data] control thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,610 | INFO     | [payload] control thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:49:49] 2025-06-04 00:48:39,699 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,776 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,803 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:39,874 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:40,335 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:40,578 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:41,079 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:41,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:49:49] 2025-06-04 00:48:42,218 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:43,692 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:49:49] 2025-06-04 00:48:44,380 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140188058560320)>', '<ExcThread(monitor, started 140187321493248)>']
[2025-06-04 02:49:49] 2025-06-04 00:48:45,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:49:49] 2025-06-04 00:48:45,268 | INFO     | [monitor] control thread has ended
[2025-06-04 02:49:49] 2025-06-04 00:48:49,406 | INFO     | all workflow threads have been joined
[2025-06-04 02:49:49] 2025-06-04 00:48:49,406 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:49:49] 2025-06-04 00:48:49,406 | INFO     | traces error code: 0
[2025-06-04 02:49:49] 2025-06-04 00:48:49,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:49:49] 2025-06-04 00:48:49,790 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:49:49] 2025-06-04 00:48:49,899 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:49:49] 2025-06-04 00:48:49,959 [wrapper] pilotpid: 2575
[2025-06-04 02:49:49] 2025-06-04 00:48:50,042 [wrapper] Pilot exit status: 0
[2025-06-04 02:49:49] 2025-06-04 00:48:50,158 [wrapper] pandaids: 6677553013
[2025-06-04 02:49:49] 2025-06-04 00:48:50,201 [wrapper] cleanup supervisor_pilot 28751 2576
[2025-06-04 02:49:49] 2025-06-04 00:48:50,205 [wrapper] Test setup, not cleaning
[2025-06-04 02:49:49] 2025-06-04 00:48:50,209 [wrapper] apfmon messages muted
[2025-06-04 02:49:49] 2025-06-04 00:48:50,214 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:49:49] 2025-06-04 00:48:50,218 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:49:49]  *** Error codes and diagnostics ***
[2025-06-04 02:49:49]     "exeErrorCode": 0,
[2025-06-04 02:49:49]     "exeErrorDiag": "",
[2025-06-04 02:49:49]     "pilotErrorCode": 0,
[2025-06-04 02:49:49]     "pilotErrorDiag": "",
[2025-06-04 02:49:49]  *** Listing of results directory ***
[2025-06-04 02:49:49] total 392996
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc    495897 Jun  3 11:45 pilot3.tar.gz
[2025-06-04 02:49:49] -rwx------. 1 boinc boinc     37140 Jun  3 11:54 runpilot2-wrapper.sh
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:54 queuedata.json
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc       100 Jun  3 22:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:49:49] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 22:13 run_atlas
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc       105 Jun  3 22:13 job.xml
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc      6393 Jun  3 22:13 init_data.xml
[2025-06-04 02:49:49] -rw-r--r--. 2 boinc boinc 214456443 Jun  3 22:13 EVNT.45006593._001112.pool.root.1
[2025-06-04 02:49:49] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:13 start_atlas.sh
[2025-06-04 02:49:49] drwxrwx--x. 2 boinc boinc        68 Jun  3 22:13 shared
[2025-06-04 02:49:49] -rw-r--r--. 2 boinc boinc    508879 Jun  3 22:13 input.tar.gz
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc         0 Jun  3 22:13 boinc_lockfile
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc      2525 Jun  3 22:44 pandaJob.out
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc    986853 Jun  3 22:47 agis_schedconf.cvmfs.json
[2025-06-04 02:49:49] drwx------. 4 boinc boinc      4096 Jun  3 22:47 pilot3
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc 180932437 Jun  4 02:45 HITS.45006595._027802.pool.root.1
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc       531 Jun  4 02:45 boinc_task_state.xml
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc      1017 Jun  4 02:46 memory_monitor_summary.json
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc   1603667 Jun  4 02:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc    382839 Jun  4 02:47 log.45006595._027802.job.log.tgz.1
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc        95 Jun  4 02:48 pilot_heartbeat.json
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc      7694 Jun  4 02:48 heartbeat.json
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc      4540 Jun  4 02:48 pilotlog.txt
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc   1225800 Jun  4 02:48 log.45006595._027802.job.log.1
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc       357 Jun  4 02:48 output.list
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc       620 Jun  4 02:48 runtime_log
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc   1628160 Jun  4 02:48 result.tar.gz
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc      8673 Jun  4 02:48 runtime_log.err
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc       657 Jun  4 02:48 qJJKDm3Wdg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcIjKDme66dnm.diag
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc      8192 Jun  4 02:49 boinc_mmap_file
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc        28 Jun  4 02:49 wrapper_checkpoint.txt
[2025-06-04 02:49:49] -rw-r--r--. 1 boinc boinc     20493 Jun  4 02:49 stderr.txt
[2025-06-04 02:49:49] HITS file was successfully produced:
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc 180932437 Jun  4 02:45 shared/HITS.pool.root.1
[2025-06-04 02:49:49]  *** Contents of shared directory: ***
[2025-06-04 02:49:49] total 388232
[2025-06-04 02:49:49] -rw-r--r--. 2 boinc boinc 214456443 Jun  3 22:13 ATLAS.root_0
[2025-06-04 02:49:49] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:13 start_atlas.sh
[2025-06-04 02:49:49] -rw-r--r--. 2 boinc boinc    508879 Jun  3 22:13 input.tar.gz
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc 180932437 Jun  4 02:45 HITS.pool.root.1
[2025-06-04 02:49:49] -rw-------. 1 boinc boinc   1628160 Jun  4 02:48 result.tar.gz
02:49:51 (10595): run_atlas exited; CPU time 51789.863073
02:49:51 (10595): called boinc_finish(0)

</stderr_txt>
]]>

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