Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:39:59 (3851481): wrapper (7.7.26015): starting
13:39:59 (3851481): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 13:39:59] Arguments: --nthreads 4
[2025-06-05 13:39:59] Threads: 4
[2025-06-05 13:39:59] Checking for CVMFS
[2025-06-05 13:39:59] No cvmfs_config command found, will try listing directly
[2025-06-05 13:39:59] CVMFS is ok
[2025-06-05 13:39:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:39:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:39:59] Further information can be found at the LHC@home message board.
[2025-06-05 13:39:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:39:59] Checking for apptainer binary...
[2025-06-05 13:39:59] which: no apptainer in ((null))
[2025-06-05 13:39:59] apptainer is not installed, using version from CVMFS
[2025-06-05 13:39:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:39:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2025-06-05 13:39:59] apptainer works
[2025-06-05 13:39:59] Set ATHENA_PROC_NUMBER=4
[2025-06-05 13:39:59] Set ATHENA_CORE_NUMBER=4
[2025-06-05 13:39:59] Starting ATLAS job with PandaID=6677550138
[2025-06-05 13:39:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:44:46]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:44:46] 2025-06-05 14:40:44,396 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6677550138/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:44:46] 2025-06-05 14:40:44,397 | INFO     | extracted standard info from prmon json
[2025-06-05 16:44:46] 2025-06-05 14:40:44,398 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:44:46] 2025-06-05 14:40:44,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:44:46] 2025-06-05 14:40:44,398 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:44:46] 2025-06-05 14:40:44,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:44:46] 2025-06-05 14:40:44,403 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:44:46] 2025-06-05 14:40:44,403 | INFO     | sum of square deviations: 1748737904.5
[2025-06-05 16:44:46] 2025-06-05 14:40:44,404 | INFO     | sum of deviations: -24228655361.5
[2025-06-05 16:44:46] 2025-06-05 14:40:44,404 | INFO     | mean x: 1749129033.5
[2025-06-05 16:44:46] 2025-06-05 14:40:44,405 | INFO     | mean y: 2348439.0168539328
[2025-06-05 16:44:46] 2025-06-05 14:40:44,405 | INFO     | -- intersect: 24236422868.58789
[2025-06-05 16:44:46] 2025-06-05 14:40:44,405 | INFO     | intersect: 24236422868.58789
[2025-06-05 16:44:46] 2025-06-05 14:40:44,405 | INFO     | chi2: 2.425965058029832
[2025-06-05 16:44:46] 2025-06-05 14:40:44,406 | INFO     | sum of square deviations: 1605470102.0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,407 | INFO     | sum of deviations: -13365987489.000002
[2025-06-05 16:44:46] 2025-06-05 14:40:44,407 | INFO     | mean x: 1749128881.0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,407 | INFO     | mean y: 2359755.2427745666
[2025-06-05 16:44:46] 2025-06-05 14:40:44,407 | INFO     | -- intersect: 14564346746.449026
[2025-06-05 16:44:46] 2025-06-05 14:40:44,407 | INFO     | intersect: 14564346746.449026
[2025-06-05 16:44:46] 2025-06-05 14:40:44,408 | INFO     | chi2: 1.7733070243822469
[2025-06-05 16:44:46] 2025-06-05 14:40:44,408 | INFO     | current chi2=1.7733070243822469 (change=26.90302696188131 %)
[2025-06-05 16:44:46] 2025-06-05 14:40:44,408 | INFO     | sum of square deviations: 1470248962.0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,409 | INFO     | sum of deviations: -12872673474.000004
[2025-06-05 16:44:46] 2025-06-05 14:40:44,409 | INFO     | mean x: 1749128728.5
[2025-06-05 16:44:46] 2025-06-05 14:40:44,410 | INFO     | mean y: 2360311.726190476
[2025-06-05 16:44:46] 2025-06-05 14:40:44,410 | INFO     | -- intersect: 15316748260.923943
[2025-06-05 16:44:46] 2025-06-05 14:40:44,410 | INFO     | intersect: 15316748260.923943
[2025-06-05 16:44:46] 2025-06-05 14:40:44,410 | INFO     | chi2: 1.770693625565897
[2025-06-05 16:44:46] 2025-06-05 14:40:44,410 | INFO     | current chi2=1.770693625565897 (change=0.14737430013058966 %)
[2025-06-05 16:44:46] 2025-06-05 14:40:44,411 | INFO     | right removable region: 167
[2025-06-05 16:44:46] 2025-06-05 14:40:44,411 | INFO     | sum of square deviations: 1605470102.0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,412 | INFO     | sum of deviations: -49234533317.0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,412 | INFO     | mean x: 1749129186.0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,412 | INFO     | mean y: 2374696.971098266
[2025-06-05 16:44:46] 2025-06-05 14:40:44,412 | INFO     | -- intersect: 53642463713.00068
[2025-06-05 16:44:46] 2025-06-05 14:40:44,413 | INFO     | intersect: 53642463713.00068
[2025-06-05 16:44:46] 2025-06-05 14:40:44,413 | INFO     | chi2: 0.9379397642316478
[2025-06-05 16:44:46] 2025-06-05 14:40:44,413 | INFO     | current chi2=0.9379397642316478 (change=61.33745780356108 %)
[2025-06-05 16:44:46] 2025-06-05 14:40:44,414 | INFO     | sum of square deviations: 1470248962.0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,415 | INFO     | sum of deviations: -42103465780.49999
[2025-06-05 16:44:46] 2025-06-05 14:40:44,415 | INFO     | mean x: 1749129338.5
[2025-06-05 16:44:46] 2025-06-05 14:40:44,415 | INFO     | mean y: 2366622.0416666665
[2025-06-05 16:44:46] 2025-06-05 14:40:44,415 | INFO     | -- intersect: 50092119550.024574
[2025-06-05 16:44:46] 2025-06-05 14:40:44,415 | INFO     | intersect: 50092119550.024574
[2025-06-05 16:44:46] 2025-06-05 14:40:44,415 | INFO     | chi2: 0.9188297484654524
[2025-06-05 16:44:46] 2025-06-05 14:40:44,416 | INFO     | current chi2=0.9188297484654524 (change=2.0374459528166162 %)
[2025-06-05 16:44:46] 2025-06-05 14:40:44,416 | INFO     | left removable region: 20
[2025-06-05 16:44:46] 2025-06-05 14:40:44,416 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,417 | INFO     | sum of deviations: -13877917728.000002
[2025-06-05 16:44:46] 2025-06-05 14:40:44,417 | INFO     | mean x: 1749129308.0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,417 | INFO     | mean y: 2357387.06122449
[2025-06-05 16:44:46] 2025-06-05 14:40:44,417 | INFO     | -- intersect: 24647758759.8785
[2025-06-05 16:44:46] 2025-06-05 14:40:44,418 | INFO     | intersect: 24647758759.8785
[2025-06-05 16:44:46] 2025-06-05 14:40:44,418 | INFO     | chi2: 0.12238560016184133
[2025-06-05 16:44:46] 2025-06-05 14:40:44,418 | INFO     | -- intersect: 24647758759.8785
[2025-06-05 16:44:46] 2025-06-05 14:40:44,418 | INFO     | current memory leak: -14.09 B/s (using 147 data points, chi2=0.12)
[2025-06-05 16:44:46] 2025-06-05 14:40:44,419 | INFO     | ..............................
[2025-06-05 16:44:46] 2025-06-05 14:40:44,419 | INFO     | . Timing measurements:
[2025-06-05 16:44:46] 2025-06-05 14:40:44,419 | INFO     | . get job = 0 s
[2025-06-05 16:44:46] 2025-06-05 14:40:44,419 | INFO     | . initial setup = 1 s
[2025-06-05 16:44:46] 2025-06-05 14:40:44,419 | INFO     | . payload setup = 6 s
[2025-06-05 16:44:46] 2025-06-05 14:40:44,419 | INFO     | . stage-in = 0 s
[2025-06-05 16:44:46] 2025-06-05 14:40:44,420 | INFO     | . payload execution = 10802 s
[2025-06-05 16:44:46] 2025-06-05 14:40:44,420 | INFO     | . stage-out = 1 s
[2025-06-05 16:44:46] 2025-06-05 14:40:44,420 | INFO     | . log creation = 0 s
[2025-06-05 16:44:46] 2025-06-05 14:40:44,420 | INFO     | ..............................
[2025-06-05 16:44:46] 2025-06-05 14:40:44,950 | INFO     | 
[2025-06-05 16:44:46] 2025-06-05 14:40:44,950 | INFO     | job summary report
[2025-06-05 16:44:46] 2025-06-05 14:40:44,950 | INFO     | --------------------------------------------------
[2025-06-05 16:44:46] 2025-06-05 14:40:44,951 | INFO     | PanDA job id: 6677550138
[2025-06-05 16:44:46] 2025-06-05 14:40:44,951 | INFO     | task id: 45006595
[2025-06-05 16:44:46] 2025-06-05 14:40:44,951 | INFO     | errors: (none)
[2025-06-05 16:44:46] 2025-06-05 14:40:44,951 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:44:46] 2025-06-05 14:40:44,951 | INFO     | pilot state: finished 
[2025-06-05 16:44:46] 2025-06-05 14:40:44,951 | INFO     | transexitcode: 0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,951 | INFO     | exeerrorcode: 0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,952 | INFO     | exeerrordiag: 
[2025-06-05 16:44:46] 2025-06-05 14:40:44,952 | INFO     | exitcode: 0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,952 | INFO     | exitmsg: OK
[2025-06-05 16:44:46] 2025-06-05 14:40:44,952 | INFO     | cpuconsumptiontime: 41504 s
[2025-06-05 16:44:46] 2025-06-05 14:40:44,952 | INFO     | nevents: 400
[2025-06-05 16:44:46] 2025-06-05 14:40:44,952 | INFO     | neventsw: 0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,952 | INFO     | pid: 3862334
[2025-06-05 16:44:46] 2025-06-05 14:40:44,952 | INFO     | pgrp: 3862334
[2025-06-05 16:44:46] 2025-06-05 14:40:44,953 | INFO     | corecount: 4
[2025-06-05 16:44:46] 2025-06-05 14:40:44,953 | INFO     | event service: False
[2025-06-05 16:44:46] 2025-06-05 14:40:44,953 | INFO     | sizes: {0: 2397181, 1: 2397380, 5: 2397586, 12: 2397642, 10813: 2426545, 10814: 2435508, 10816: 2435692, 10820: 2435862}
[2025-06-05 16:44:46] 2025-06-05 14:40:44,953 | INFO     | --------------------------------------------------
[2025-06-05 16:44:46] 2025-06-05 14:40:44,953 | INFO     | 
[2025-06-05 16:44:46] 2025-06-05 14:40:44,953 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-06-05 16:44:46] 2025-06-05 14:40:44,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,973 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,973 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,975 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,975 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,975 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,975 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:44:46] 2025-06-05 14:40:44,976 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,976 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:44:46] 2025-06-05 14:40:44,976 | INFO     | job 6677550138 has completed (purged errors)
[2025-06-05 16:44:46] 2025-06-05 14:40:44,976 | INFO     | overall cleanup function is called
[2025-06-05 16:44:46] 2025-06-05 14:40:45,981 | INFO     | --- collectZombieJob: --- 10, [3862334]
[2025-06-05 16:44:46] 2025-06-05 14:40:45,981 | INFO     | zombie collector waiting for pid 3862334
[2025-06-05 16:44:46] 2025-06-05 14:40:45,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:44:46] 2025-06-05 14:40:45,981 | INFO     | collected zombie processes
[2025-06-05 16:44:46] 2025-06-05 14:40:45,981 | INFO     | will attempt to kill all subprocesses of pid=3862334
[2025-06-05 16:44:46] 2025-06-05 14:40:46,264 | INFO     | process IDs to be killed: [3862334] (in reverse order)
[2025-06-05 16:44:46] 2025-06-05 14:40:46,344 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:44:46] 2025-06-05 14:40:46,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:44:46] 2025-06-05 14:40:46,352 | INFO     | did not find any defunct processes belonging to 3862334
[2025-06-05 16:44:46] 2025-06-05 14:40:46,360 | INFO     | did not find any defunct processes belonging to 3862334
[2025-06-05 16:44:46] 2025-06-05 14:40:46,360 | INFO     | ready for new job
[2025-06-05 16:44:46] 2025-06-05 14:40:46,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:44:46] 2025-06-05 14:40:46,362 | INFO     | **************************************
[2025-06-05 16:44:46] 2025-06-05 14:40:46,363 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:44:46] 2025-06-05 14:40:46,363 | INFO     | **************************************
[2025-06-05 16:44:46] 2025-06-05 14:40:46,363 | INFO     | 
[2025-06-05 16:44:46] 2025-06-05 14:40:46,366 | INFO     | architecture information:
[2025-06-05 16:44:46] 2025-06-05 14:40:46,366 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:44:46] 2025-06-05 14:40:46,379 | INFO     | cat /etc/os-release:
[2025-06-05 16:44:46] NAME="CentOS Linux"
[2025-06-05 16:44:46] VERSION="7 (Core)"
[2025-06-05 16:44:46] ID="centos"
[2025-06-05 16:44:46] ID_LIKE="rhel fedora"
[2025-06-05 16:44:46] VERSION_ID="7"
[2025-06-05 16:44:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:44:46] ANSI_COLOR="0;31"
[2025-06-05 16:44:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:44:46] HOME_URL="https://www.centos.org/"
[2025-06-05 16:44:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:44:46] 
[2025-06-05 16:44:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:44:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:44:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:44:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:44:46] 
[2025-06-05 16:44:46] 2025-06-05 14:40:46,380 | INFO     | **************************************
[2025-06-05 16:44:46] 2025-06-05 14:40:46,883 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-06-05 16:44:46] 2025-06-05 14:40:46,897 | INFO     | sufficient remaining disk space (1662088380416 B)
[2025-06-05 16:44:46] 2025-06-05 14:40:46,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:44:46] 2025-06-05 14:40:46,898 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:44:46] 2025-06-05 14:40:46,898 | INFO     | update_server=False
[2025-06-05 16:44:46] 2025-06-05 14:40:46,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:44:46] 2025-06-05 14:40:46,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:44:46] 2025-06-05 14:40:46,966 | INFO     | all payload control threads have been joined
[2025-06-05 16:44:46] 2025-06-05 14:40:47,338 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:44:46] 2025-06-05 14:40:47,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:44:46] 2025-06-05 14:40:47,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:44:46] 2025-06-05 14:40:47,491 | INFO     | all data control threads have been joined
[2025-06-05 16:44:46] 2025-06-05 14:40:47,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:44:46] 2025-06-05 14:40:47,528 | INFO     | aborting loop
[2025-06-05 16:44:46] 2025-06-05 14:40:47,761 | INFO     | all job control threads have been joined
[2025-06-05 16:44:46] 2025-06-05 14:40:47,904 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:47,943 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:47,972 | INFO     | [payload] control thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:47,986 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:47,994 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:48,496 | INFO     | [data] control thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:48,532 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:48,653 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:48,692 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:48,767 | INFO     | [job] control thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:48,904 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:48,905 | INFO     | [job] validate thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:49,027 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:49,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:44:46] 2025-06-05 14:40:50,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:44:46] 2025-06-05 14:40:50,546 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:54,198 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:40:57,805 | INFO     | job.realtimelogging is not enabled
[2025-06-05 16:44:46] 2025-06-05 14:40:58,811 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:44:46] 2025-06-05 14:41:00,876 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22994061526848)>', '<ExcThread(monitor, started 22993822512896)>']
[2025-06-05 16:44:46] 2025-06-05 14:41:01,404 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:44:46] 2025-06-05 14:41:01,404 | INFO     | [monitor] control thread has ended
[2025-06-05 16:44:46] 2025-06-05 14:41:05,900 | INFO     | all workflow threads have been joined
[2025-06-05 16:44:46] 2025-06-05 14:41:05,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:44:46] 2025-06-05 14:41:05,901 | INFO     | traces error code: 0
[2025-06-05 16:44:46] 2025-06-05 14:41:05,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:44:46] 2025-06-05 14:41:06,020 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:44:46] 2025-06-05 14:41:06,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:44:46] 2025-06-05 14:41:06,024 [wrapper] pilotpid: 3855560
[2025-06-05 16:44:46] 2025-06-05 14:41:06,027 [wrapper] Pilot exit status: 0
[2025-06-05 16:44:46] 2025-06-05 14:41:06,036 [wrapper] pandaids: 6677550138
[2025-06-05 16:44:46] 2025-06-05 14:41:06,083 [wrapper] cleanup supervisor_pilot 4085353 3855561
[2025-06-05 16:44:46] 2025-06-05 14:41:06,085 [wrapper] Test setup, not cleaning
[2025-06-05 16:44:46] 2025-06-05 14:41:06,088 [wrapper] apfmon messages muted
[2025-06-05 16:44:46] 2025-06-05 14:41:06,090 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:44:46] 2025-06-05 14:41:06,092 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:44:46]  *** Error codes and diagnostics ***
[2025-06-05 16:44:46]     "exeErrorCode": 0,
[2025-06-05 16:44:46]     "exeErrorDiag": "",
[2025-06-05 16:44:46]     "pilotErrorCode": 0,
[2025-06-05 16:44:46]     "pilotErrorDiag": "",
[2025-06-05 16:44:46]  *** Listing of results directory ***
[2025-06-05 16:44:46] total 392376
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc      5111 Jun  3 11:07 queuedata.json
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc    495897 Jun  3 11:07 pilot3.tar.gz
[2025-06-05 16:44:46] -rwx------ 1 boinc boinc     37140 Jun  3 11:09 runpilot2-wrapper.sh
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc       100 Jun  5 13:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:44:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 13:39 run_atlas
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc       105 Jun  5 13:39 job.xml
[2025-06-05 16:44:46] -rw-r--r-- 2 boinc boinc 214459431 Jun  5 13:39 EVNT.45006593._001071.pool.root.1
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc      6422 Jun  5 13:39 init_data.xml
[2025-06-05 16:44:46] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:39 start_atlas.sh
[2025-06-05 16:44:46] drwxrwx--x 2 boinc boinc      4096 Jun  5 13:39 shared
[2025-06-05 16:44:46] -rw-r--r-- 2 boinc boinc    508882 Jun  5 13:39 input.tar.gz
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc         0 Jun  5 13:39 boinc_lockfile
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc      2524 Jun  5 13:39 pandaJob.out
[2025-06-05 16:44:46] -rw------- 1 boinc boinc    982836 Jun  5 13:40 agis_schedconf.cvmfs.json
[2025-06-05 16:44:46] drwx------ 4 boinc boinc      4096 Jun  5 13:40 pilot3
[2025-06-05 16:44:46] -rw------- 1 boinc boinc        95 Jun  5 16:39 pilot_heartbeat.json
[2025-06-05 16:44:46] -rw------- 1 boinc boinc 180838522 Jun  5 16:40 HITS.45006595._026786.pool.root.1
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc       528 Jun  5 16:40 boinc_task_state.xml
[2025-06-05 16:44:46] -rw------- 1 boinc boinc      1038 Jun  5 16:40 memory_monitor_summary.json
[2025-06-05 16:44:46] -rw------- 1 boinc boinc   1598969 Jun  5 16:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:44:46] -rw------- 1 boinc boinc    310318 Jun  5 16:40 log.45006595._026786.job.log.tgz.1
[2025-06-05 16:44:46] -rw------- 1 boinc boinc      7731 Jun  5 16:40 heartbeat.json
[2025-06-05 16:44:46] -rw------- 1 boinc boinc      4436 Jun  5 16:41 pilotlog.txt
[2025-06-05 16:44:46] -rw------- 1 boinc boinc   1022825 Jun  5 16:41 log.45006595._026786.job.log.1
[2025-06-05 16:44:46] -rw------- 1 boinc boinc       357 Jun  5 16:41 output.list
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc       620 Jun  5 16:41 runtime_log
[2025-06-05 16:44:46] -rw------- 1 boinc boinc   1351680 Jun  5 16:41 result.tar.gz
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc      9026 Jun  5 16:41 runtime_log.err
[2025-06-05 16:44:46] -rw------- 1 boinc boinc       665 Jun  5 16:41 lJYNDmYpcg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmV5XKDmyMh6Po.diag
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc        26 Jun  5 16:44 wrapper_checkpoint.txt
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc      8192 Jun  5 16:44 boinc_mmap_file
[2025-06-05 16:44:46] -rw-r--r-- 1 boinc boinc     20602 Jun  5 16:44 stderr.txt
[2025-06-05 16:44:46] HITS file was successfully produced:
[2025-06-05 16:44:46] -rw------- 1 boinc boinc 180838522 Jun  5 16:40 shared/HITS.pool.root.1
[2025-06-05 16:44:46]  *** Contents of shared directory: ***
[2025-06-05 16:44:46] total 387884
[2025-06-05 16:44:46] -rw-r--r-- 2 boinc boinc 214459431 Jun  5 13:39 ATLAS.root_0
[2025-06-05 16:44:46] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:39 start_atlas.sh
[2025-06-05 16:44:46] -rw-r--r-- 2 boinc boinc    508882 Jun  5 13:39 input.tar.gz
[2025-06-05 16:44:46] -rw------- 1 boinc boinc 180838522 Jun  5 16:40 HITS.pool.root.1
[2025-06-05 16:44:46] -rw------- 1 boinc boinc   1351680 Jun  5 16:41 result.tar.gz
16:44:48 (3851481): run_atlas exited; CPU time 41864.972609
16:44:48 (3851481): called boinc_finish(0)

</stderr_txt>
]]>

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