Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:02:12 (46928): wrapper (7.7.26015): starting
08:02:12 (46928): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:02:12] Arguments: --nthreads 8
[2025-06-03 08:02:12] Threads: 8
[2025-06-03 08:02:12] Checking for CVMFS
[2025-06-03 08:02:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:02:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:02:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:02:13] 2.11.2.0 6655 27317 200600 146741 0 187 15889641 18432000 5454 130560 0 75755593 98.896 172070245 36003 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 08:02:13] CVMFS is ok
[2025-06-03 08:02:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 08:02:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 08:02:13] Further information can be found at the LHC@home message board.
[2025-06-03 08:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:02:13] Checking for apptainer binary...
[2025-06-03 08:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:02:13] Running /usr/bin/apptainer --version
[2025-06-03 08:02:13] apptainer version 1.3.2-1.el7
[2025-06-03 08:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:02:13] c-210-37-2.aglt2.org
[2025-06-03 08:02:13] apptainer works
[2025-06-03 08:02:13] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:02:13] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:02:13] Starting ATLAS job with PandaID=6677496340
[2025-06-03 08:02:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:20:54]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:20:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 09:20:54]  replicas=None
[2025-06-03 09:20:54]  scope=mc23_13p6TeV
[2025-06-03 09:20:54]  status=None
[2025-06-03 09:20:54]  status_code=0
[2025-06-03 09:20:54]  storage_token=
[2025-06-03 09:20:54]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677496340/log.45006595._023124.job.log.tgz.1
[2025-06-03 09:20:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/cc/log.45006595._023124.job.log.tgz.1
[2025-06-03 09:20:54]  workdir=None
[2025-06-03 09:20:54] ]
[2025-06-03 09:20:54] 2025-06-03 13:20:28,061 | INFO     | transferring file log.45006595._023124.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677496340/log.45006595._023124.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 09:20:54] 2025-06-03 13:20:28,061 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677496340/log.45006595._023124.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._023124.job
[2025-06-03 09:20:54] 2025-06-03 13:20:28,079 | INFO     | adding to output.list: log.45006595._023124.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/cc/log.45006595._023124.job.log.tg
[2025-06-03 09:20:54] 2025-06-03 13:20:28,080 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 09:20:54] 2025-06-03 13:20:28,080 | INFO     | summary of transferred files:
[2025-06-03 09:20:54] 2025-06-03 13:20:28,080 | INFO     |  -- lfn=log.45006595._023124.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 09:20:54] 2025-06-03 13:20:28,080 | INFO     | stage-out finished correctly
[2025-06-03 09:20:54] 2025-06-03 13:20:29,274 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 09:20:54] 2025-06-03 13:20:29,355 | INFO     | job 6677496340 has state=finished
[2025-06-03 09:20:54] 2025-06-03 13:20:29,355 | INFO     | preparing for final server update for job 6677496340 in state='finished'
[2025-06-03 09:20:54] 2025-06-03 13:20:29,356 | INFO     | this job has now completed (state=finished)
[2025-06-03 09:20:54] 2025-06-03 13:20:29,356 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 09:20:54] 2025-06-03 13:20:29,356 | INFO     | log transfer has been attempted: DONE
[2025-06-03 09:20:54] 2025-06-03 13:20:29,356 | INFO     | job 6677496340 has finished - writing final server update
[2025-06-03 09:20:54] 2025-06-03 13:20:29,356 | INFO     | total number of processed events: 400 (read)
[2025-06-03 09:20:54] 2025-06-03 13:20:29,360 | INFO     | executing command: lscpu
[2025-06-03 09:20:54] 2025-06-03 13:20:29,406 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 09:20:54] 2025-06-03 13:20:33,785 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 09:20:54] 2025-06-03 13:20:33,785 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677496340/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:20:54] 2025-06-03 13:20:33,786 | INFO     | extracted standard info from prmon json
[2025-06-03 09:20:54] 2025-06-03 13:20:33,786 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:20:54] 2025-06-03 13:20:33,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:20:54] 2025-06-03 13:20:33,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:20:54] 2025-06-03 13:20:33,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:20:54] 2025-06-03 13:20:33,789 | INFO     | fitting pss+swap vs Time
[2025-06-03 09:20:54] 2025-06-03 13:20:33,789 | INFO     | sum of square deviations: 106336877.5
[2025-06-03 09:20:54] 2025-06-03 13:20:33,790 | INFO     | sum of deviations: 1524185619.499999
[2025-06-03 09:20:54] 2025-06-03 13:20:33,790 | INFO     | mean x: 1748954580.5
[2025-06-03 09:20:54] 2025-06-03 13:20:33,790 | INFO     | mean y: 2478949.0428571426
[2025-06-03 09:20:54] 2025-06-03 13:20:33,790 | INFO     | -- intersect: -25066259981.689365
[2025-06-03 09:20:54] 2025-06-03 13:20:33,790 | INFO     | intersect: -25066259981.689365
[2025-06-03 09:20:54] 2025-06-03 13:20:33,790 | INFO     | chi2: 0.015883021982370914
[2025-06-03 09:20:54] 2025-06-03 13:20:33,790 | INFO     | -- intersect: -25066259981.689365
[2025-06-03 09:20:54] 2025-06-03 13:20:33,791 | INFO     | current memory leak: 14.33 B/s (using 70 data points, chi2=0.02)
[2025-06-03 09:20:54] 2025-06-03 13:20:33,791 | INFO     | ..............................
[2025-06-03 09:20:54] 2025-06-03 13:20:33,791 | INFO     | . Timing measurements:
[2025-06-03 09:20:54] 2025-06-03 13:20:33,791 | INFO     | . get job = 0 s
[2025-06-03 09:20:54] 2025-06-03 13:20:33,791 | INFO     | . initial setup = 2 s
[2025-06-03 09:20:54] 2025-06-03 13:20:33,792 | INFO     | . payload setup = 7 s
[2025-06-03 09:20:54] 2025-06-03 13:20:33,792 | INFO     | . stage-in = 0 s
[2025-06-03 09:20:54] 2025-06-03 13:20:33,792 | INFO     | . payload execution = 4657 s
[2025-06-03 09:20:54] 2025-06-03 13:20:33,792 | INFO     | . stage-out = 0 s
[2025-06-03 09:20:54] 2025-06-03 13:20:33,792 | INFO     | . log creation = 0 s
[2025-06-03 09:20:54] 2025-06-03 13:20:33,792 | INFO     | ..............................
[2025-06-03 09:20:54] 2025-06-03 13:20:33,859 | INFO     | 
[2025-06-03 09:20:54] 2025-06-03 13:20:33,860 | INFO     | job summary report
[2025-06-03 09:20:54] 2025-06-03 13:20:33,860 | INFO     | --------------------------------------------------
[2025-06-03 09:20:54] 2025-06-03 13:20:33,860 | INFO     | PanDA job id: 6677496340
[2025-06-03 09:20:54] 2025-06-03 13:20:33,860 | INFO     | task id: 45006595
[2025-06-03 09:20:54] 2025-06-03 13:20:33,860 | INFO     | errors: (none)
[2025-06-03 09:20:54] 2025-06-03 13:20:33,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:20:54] 2025-06-03 13:20:33,860 | INFO     | pilot state: finished 
[2025-06-03 09:20:54] 2025-06-03 13:20:33,860 | INFO     | transexitcode: 0
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | exeerrorcode: 0
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | exeerrordiag: 
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | exitcode: 0
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | exitmsg: OK
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | cpuconsumptiontime: 30764 s
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | nevents: 400
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | neventsw: 0
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | pid: 56944
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | pgrp: 56944
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | corecount: 8
[2025-06-03 09:20:54] 2025-06-03 13:20:33,861 | INFO     | event service: False
[2025-06-03 09:20:54] 2025-06-03 13:20:33,862 | INFO     | sizes: {0: 2405182, 5: 2405388, 11: 2405444, 4667: 2431612, 4668: 2440553, 4669: 2440609, 4674: 2440907}
[2025-06-03 09:20:54] 2025-06-03 13:20:33,862 | INFO     | --------------------------------------------------
[2025-06-03 09:20:54] 2025-06-03 13:20:33,862 | INFO     | 
[2025-06-03 09:20:54] 2025-06-03 13:20:33,862 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 09:20:54] 2025-06-03 13:20:33,877 | WARNING  | process 56944 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 09:20:54] 2025-06-03 13:20:33,878 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677496340/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:20:54] 2025-06-03 13:20:33,878 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677496340/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:20:54] 2025-06-03 13:20:33,879 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3458492 B
[2025-06-03 09:20:54] 2025-06-03 13:20:33,880 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15777 B
[2025-06-03 09:20:54] 2025-06-03 13:20:33,880 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 09:20:54] 2025-06-03 13:20:33,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:20:54] 2025-06-03 13:20:33,888 | INFO     | job 6677496340 has completed (purged errors)
[2025-06-03 09:20:54] 2025-06-03 13:20:33,889 | INFO     | overall cleanup function is called
[2025-06-03 09:20:54] 2025-06-03 13:20:33,896 | INFO     | sufficient remaining disk space (54183067648 B)
[2025-06-03 09:20:54] 2025-06-03 13:20:33,896 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-03 09:20:54] 2025-06-03 13:20:33,897 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6677496340/HITS.45006595._023124.pool.root.1 since it does not exist
[2025-06-03 09:20:54] 2025-06-03 13:20:34,070 | INFO     | number of running child processes to parent process 56944: 1
[2025-06-03 09:20:54] 2025-06-03 13:20:34,070 | INFO     | maximum number of monitored processes: 6
[2025-06-03 09:20:54] 2025-06-03 13:20:34,070 | INFO     | aborting job monitoring since job object (job id=6677496340) has expired
[2025-06-03 09:20:54] 2025-06-03 13:20:34,899 | INFO     | --- collectZombieJob: --- 10, [56944]
[2025-06-03 09:20:54] 2025-06-03 13:20:34,899 | INFO     | zombie collector waiting for pid 56944
[2025-06-03 09:20:54] 2025-06-03 13:20:34,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:20:54] 2025-06-03 13:20:34,899 | INFO     | collected zombie processes
[2025-06-03 09:20:54] 2025-06-03 13:20:34,899 | INFO     | will attempt to kill all subprocesses of pid=56944
[2025-06-03 09:20:54] 2025-06-03 13:20:35,074 | INFO     | process IDs to be killed: [56944] (in reverse order)
[2025-06-03 09:20:54] 2025-06-03 13:20:35,150 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:20:54] 2025-06-03 13:20:35,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:20:54] 2025-06-03 13:20:35,156 | INFO     | did not find any defunct processes belonging to 56944
[2025-06-03 09:20:54] 2025-06-03 13:20:35,160 | INFO     | did not find any defunct processes belonging to 56944
[2025-06-03 09:20:54] 2025-06-03 13:20:35,161 | INFO     | ready for new job
[2025-06-03 09:20:54] 2025-06-03 13:20:35,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:20:54] 2025-06-03 13:20:35,162 | INFO     | **************************************
[2025-06-03 09:20:54] 2025-06-03 13:20:35,162 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:20:54] 2025-06-03 13:20:35,162 | INFO     | **************************************
[2025-06-03 09:20:54] 2025-06-03 13:20:35,162 | INFO     | 
[2025-06-03 09:20:54] 2025-06-03 13:20:35,165 | INFO     | architecture information:
[2025-06-03 09:20:54] 2025-06-03 13:20:35,165 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:20:54] 2025-06-03 13:20:35,184 | INFO     | cat /etc/os-release:
[2025-06-03 09:20:54] NAME="CentOS Linux"
[2025-06-03 09:20:54] VERSION="7 (Core)"
[2025-06-03 09:20:54] ID="centos"
[2025-06-03 09:20:54] ID_LIKE="rhel fedora"
[2025-06-03 09:20:54] VERSION_ID="7"
[2025-06-03 09:20:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:20:54] ANSI_COLOR="0;31"
[2025-06-03 09:20:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:20:54] HOME_URL="https://www.centos.org/"
[2025-06-03 09:20:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:20:54] 
[2025-06-03 09:20:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:20:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:20:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:20:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:20:54] 
[2025-06-03 09:20:54] 2025-06-03 13:20:35,185 | INFO     | **************************************
[2025-06-03 09:20:54] 2025-06-03 13:20:35,687 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 09:20:54] 2025-06-03 13:20:35,705 | INFO     | sufficient remaining disk space (54183067648 B)
[2025-06-03 09:20:54] 2025-06-03 13:20:35,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:20:54] 2025-06-03 13:20:35,706 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:20:54] 2025-06-03 13:20:35,706 | INFO     | update_server=False
[2025-06-03 09:20:54] 2025-06-03 13:20:35,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:20:54] 2025-06-03 13:20:35,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:20:54] 2025-06-03 13:20:35,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:20:54] 2025-06-03 13:20:35,706 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 09:20:54] 2025-06-03 13:20:35,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:20:54] 2025-06-03 13:20:35,707 | INFO     | aborting loop
[2025-06-03 09:20:54] 2025-06-03 13:20:35,707 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:20:54] 2025-06-03 13:20:35,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:20:54] 2025-06-03 13:20:35,708 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:20:54] 2025-06-03 13:20:36,175 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:20:54] 2025-06-03 13:20:36,197 | INFO     | all data control threads have been joined
[2025-06-03 09:20:54] 2025-06-03 13:20:36,606 | INFO     | all job control threads have been joined
[2025-06-03 09:20:54] 2025-06-03 13:20:36,711 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:36,712 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:36,712 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:36,716 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:36,726 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:36,731 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:37,164 | INFO     | all payload control threads have been joined
[2025-06-03 09:20:54] 2025-06-03 13:20:37,203 | INFO     | [data] control thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:37,345 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:37,611 | INFO     | [job] control thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:37,753 | INFO     | [job] validate thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:38,000 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:38,135 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:38,169 | INFO     | [payload] control thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:38,180 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:39,709 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:45,831 | INFO     | job.realtimelogging is not enabled
[2025-06-03 09:20:54] 2025-06-03 13:20:46,836 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:20:54] 2025-06-03 13:20:48,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140683355879232)>', '<ExcThread(monitor, started 140682794628864)>']
[2025-06-03 09:20:54] 2025-06-03 13:20:48,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:20:54] 2025-06-03 13:20:48,765 | INFO     | [monitor] control thread has ended
[2025-06-03 09:20:54] 2025-06-03 13:20:53,666 | INFO     | all workflow threads have been joined
[2025-06-03 09:20:54] 2025-06-03 13:20:53,666 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:20:54] 2025-06-03 13:20:53,667 | INFO     | traces error code: 0
[2025-06-03 09:20:54] 2025-06-03 13:20:53,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:20:54] 2025-06-03 13:20:53,819 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:20:54] 2025-06-03 13:20:53,822 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:20:54] 2025-06-03 13:20:53,824 [wrapper] pilotpid: 50504
[2025-06-03 09:20:54] 2025-06-03 13:20:53,827 [wrapper] Pilot exit status: 0
[2025-06-03 09:20:54] 2025-06-03 13:20:53,838 [wrapper] pandaids: 6677496340
[2025-06-03 09:20:54] 2025-06-03 13:20:53,878 [wrapper] cleanup supervisor_pilot 202037 50505
[2025-06-03 09:20:54] 2025-06-03 13:20:53,881 [wrapper] Test setup, not cleaning
[2025-06-03 09:20:54] 2025-06-03 13:20:53,884 [wrapper] apfmon messages muted
[2025-06-03 09:20:54] 2025-06-03 13:20:53,886 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:20:54] 2025-06-03 13:20:53,889 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:20:54]  *** Error codes and diagnostics ***
[2025-06-03 09:20:54]     "exeErrorCode": 0,
[2025-06-03 09:20:54]     "exeErrorDiag": "",
[2025-06-03 09:20:54]     "pilotErrorCode": 0,
[2025-06-03 09:20:54]     "pilotErrorDiag": "",
[2025-06-03 09:20:54]  *** Listing of results directory ***
[2025-06-03 09:20:54] total 391612
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 02:46 pilot3.tar.gz
[2025-06-03 09:20:54] -rwx------ 1 boincer umatlas     37140 Jun  3 02:53 runpilot2-wrapper.sh
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 02:53 queuedata.json
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas       100 Jun  3 08:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:20:54] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 08:02 run_atlas
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas       105 Jun  3 08:02 job.xml
[2025-06-03 09:20:54] -rw-r--r-- 2 boincer umatlas 215774988 Jun  3 08:02 EVNT.45006593._000925.pool.root.1
[2025-06-03 09:20:54] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 08:02 start_atlas.sh
[2025-06-03 09:20:54] drwxrwx--x 2 boincer umatlas      4096 Jun  3 08:02 shared
[2025-06-03 09:20:54] -rw-r--r-- 2 boincer umatlas    508874 Jun  3 08:02 input.tar.gz
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas         0 Jun  3 08:02 boinc_lockfile
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 08:02 pandaJob.out
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas    982666 Jun  3 08:02 agis_schedconf.cvmfs.json
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas   1603667 Jun  3 08:02 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:20:54] drwx------ 4 boincer umatlas      4096 Jun  3 08:02 pilot3
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas      6355 Jun  3 09:18 init_data.xml
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas 179854433 Jun  3 09:19 HITS.45006595._023124.pool.root.1
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas       529 Jun  3 09:20 boinc_task_state.xml
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas      1049 Jun  3 09:20 memory_monitor_summary.json
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas    313132 Jun  3 09:20 log.45006595._023124.job.log.tgz.1
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas      7735 Jun  3 09:20 heartbeat.json
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas        95 Jun  3 09:20 pilot_heartbeat.json
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 09:20 boinc_mmap_file
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas        27 Jun  3 09:20 wrapper_checkpoint.txt
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas      4548 Jun  3 09:20 pilotlog.txt
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas    461512 Jun  3 09:20 log.45006595._023124.job.log.1
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas       357 Jun  3 09:20 output.list
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas       620 Jun  3 09:20 runtime_log
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas    798720 Jun  3 09:20 result.tar.gz
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas      8669 Jun  3 09:20 runtime_log.err
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas       659 Jun  3 09:20 3TeKDmDiag7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIZiKDmjVFrmn.diag
[2025-06-03 09:20:54] -rw-r--r-- 1 boincer umatlas     21921 Jun  3 09:20 stderr.txt
[2025-06-03 09:20:54] HITS file was successfully produced:
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas 179854433 Jun  3 09:19 shared/HITS.pool.root.1
[2025-06-03 09:20:54]  *** Contents of shared directory: ***
[2025-06-03 09:20:54] total 387660
[2025-06-03 09:20:54] -rw-r--r-- 2 boincer umatlas 215774988 Jun  3 08:02 ATLAS.root_0
[2025-06-03 09:20:54] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 08:02 start_atlas.sh
[2025-06-03 09:20:54] -rw-r--r-- 2 boincer umatlas    508874 Jun  3 08:02 input.tar.gz
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas 179854433 Jun  3 09:19 HITS.pool.root.1
[2025-06-03 09:20:54] -rw------- 1 boincer umatlas    798720 Jun  3 09:20 result.tar.gz
09:20:55 (46928): run_atlas exited; CPU time 30554.701098
09:20:55 (46928): called boinc_finish(0)

</stderr_txt>
]]>

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