Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:58:54 (293572): wrapper (7.7.26015): starting
07:58:54 (293572): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:58:54] Arguments: --nthreads 8
[2025-06-03 07:58:54] Threads: 8
[2025-06-03 07:58:54] Checking for CVMFS
[2025-06-03 07:58:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:58:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:58:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:58:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:58:54] 2.12.6.0 851069 31330 440908 146741 3 187 31324576 40960001 6368 16776704 1 139293818 99.644 134478682 24184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 07:58:54] CVMFS is ok
[2025-06-03 07:58:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 07:58:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 07:58:54] Further information can be found at the LHC@home message board.
[2025-06-03 07:58:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:58:54] Checking for apptainer binary...
[2025-06-03 07:58:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:58:54] Running /usr/bin/apptainer --version
[2025-06-03 07:58:54] apptainer version 1.4.1-1.el9
[2025-06-03 07:58:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:58:54] c7-11-11.aglt2.org
[2025-06-03 07:58:54] apptainer works
[2025-06-03 07:58:54] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:58:54] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:58:54] Starting ATLAS job with PandaID=6668690132
[2025-06-03 07:58:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:32:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:32:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 09:32:13]  is_altstaged=None
[2025-06-03 09:32:13]  is_tar=False
[2025-06-03 09:32:13]  lfn=log.44871837._087735.job.log.tgz.1
[2025-06-03 09:32:13]  mtime=0
[2025-06-03 09:32:13]  protocol_id=None
[2025-06-03 09:32:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 09:32:13]  replicas=None
[2025-06-03 09:32:13]  scope=mc23_13p6TeV
[2025-06-03 09:32:13]  status=None
[2025-06-03 09:32:13]  status_code=0
[2025-06-03 09:32:13]  storage_token=
[2025-06-03 09:32:13]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6668690132/log.44871837._087735.job.log.tgz.1
[2025-06-03 09:32:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/77/log.44871837._087735.job.log.tgz.1
[2025-06-03 09:32:13]  workdir=None
[2025-06-03 09:32:13] ]
[2025-06-03 09:32:13] 2025-06-03 13:31:49,288 | INFO     | transferring file log.44871837._087735.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6668690132/log.44871837._087735.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 09:32:13] 2025-06-03 13:31:49,289 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6668690132/log.44871837._087735.job.log.tgz.1 /tmp/boinchome/slots/7/log.44871837._087735.job
[2025-06-03 09:32:13] 2025-06-03 13:31:49,314 | INFO     | adding to output.list: log.44871837._087735.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/77/log.44871837._087735.job.log.tg
[2025-06-03 09:32:13] 2025-06-03 13:31:49,315 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 09:32:13] 2025-06-03 13:31:49,315 | INFO     | summary of transferred files:
[2025-06-03 09:32:13] 2025-06-03 13:31:49,315 | INFO     |  -- lfn=log.44871837._087735.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 09:32:13] 2025-06-03 13:31:49,316 | INFO     | stage-out finished correctly
[2025-06-03 09:32:13] 2025-06-03 13:31:52,075 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 09:32:13] 2025-06-03 13:31:52,949 | WARNING  | process 303712 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 09:32:13] 2025-06-03 13:31:52,949 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6668690132/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:32:13] 2025-06-03 13:31:53,243 | INFO     | number of running child processes to parent process 303712: 1
[2025-06-03 09:32:13] 2025-06-03 13:31:53,244 | INFO     | maximum number of monitored processes: 6
[2025-06-03 09:32:13] 2025-06-03 13:31:54,611 | INFO     | job 6668690132 has state=finished
[2025-06-03 09:32:13] 2025-06-03 13:31:54,611 | INFO     | preparing for final server update for job 6668690132 in state='finished'
[2025-06-03 09:32:13] 2025-06-03 13:31:54,612 | INFO     | this job has now completed (state=finished)
[2025-06-03 09:32:13] 2025-06-03 13:31:54,612 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 09:32:13] 2025-06-03 13:31:54,612 | INFO     | log transfer has been attempted: DONE
[2025-06-03 09:32:13] 2025-06-03 13:31:54,612 | INFO     | job 6668690132 has finished - writing final server update
[2025-06-03 09:32:13] 2025-06-03 13:31:54,613 | INFO     | total number of processed events: 400 (read)
[2025-06-03 09:32:13] 2025-06-03 13:31:54,629 | INFO     | executing command: lscpu
[2025-06-03 09:32:13] 2025-06-03 13:31:54,695 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 09:32:13] 2025-06-03 13:31:55,748 | INFO     | monitor loop #409: job 0:6668690132 is in state 'finished'
[2025-06-03 09:32:13] 2025-06-03 13:31:55,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 09:32:13] 2025-06-03 13:31:58,251 | INFO     | monitor loop #410: job 0:6668690132 is in state 'finished'
[2025-06-03 09:32:13] 2025-06-03 13:31:58,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 09:32:13] 2025-06-03 13:31:58,590 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 09:32:13] 2025-06-03 13:31:58,590 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6668690132/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:32:13] 2025-06-03 13:31:58,591 | INFO     | extracted standard info from prmon json
[2025-06-03 09:32:13] 2025-06-03 13:31:58,591 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:32:13] 2025-06-03 13:31:58,591 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:32:13] 2025-06-03 13:31:58,592 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:32:13] 2025-06-03 13:31:58,592 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:32:13] 2025-06-03 13:31:58,593 | INFO     | fitting pss+swap vs Time
[2025-06-03 09:32:13] 2025-06-03 13:31:58,594 | INFO     | sum of square deviations: 183761585.0
[2025-06-03 09:32:13] 2025-06-03 13:31:58,594 | INFO     | sum of deviations: 11256613589.000002
[2025-06-03 09:32:13] 2025-06-03 13:31:58,594 | INFO     | mean x: 1748954809.5
[2025-06-03 09:32:13] 2025-06-03 13:31:58,594 | INFO     | mean y: 2115121.1666666665
[2025-06-03 09:32:13] 2025-06-03 13:31:58,594 | INFO     | -- intersect: -107132945099.19772
[2025-06-03 09:32:13] 2025-06-03 13:31:58,594 | INFO     | intersect: -107132945099.19772
[2025-06-03 09:32:13] 2025-06-03 13:31:58,595 | INFO     | chi2: 0.8870548210852807
[2025-06-03 09:32:13] 2025-06-03 13:31:58,595 | INFO     | -- intersect: -107132945099.19772
[2025-06-03 09:32:13] 2025-06-03 13:31:58,595 | INFO     | current memory leak: 61.26 B/s (using 84 data points, chi2=0.89)
[2025-06-03 09:32:13] 2025-06-03 13:31:58,595 | INFO     | ..............................
[2025-06-03 09:32:13] 2025-06-03 13:31:58,595 | INFO     | . Timing measurements:
[2025-06-03 09:32:13] 2025-06-03 13:31:58,595 | INFO     | . get job = 0 s
[2025-06-03 09:32:13] 2025-06-03 13:31:58,595 | INFO     | . initial setup = 2 s
[2025-06-03 09:32:13] 2025-06-03 13:31:58,595 | INFO     | . payload setup = 6 s
[2025-06-03 09:32:13] 2025-06-03 13:31:58,595 | INFO     | . stage-in = 0 s
[2025-06-03 09:32:13] 2025-06-03 13:31:58,596 | INFO     | . payload execution = 5536 s
[2025-06-03 09:32:13] 2025-06-03 13:31:58,596 | INFO     | . stage-out = 0 s
[2025-06-03 09:32:13] 2025-06-03 13:31:58,596 | INFO     | . log creation = 0 s
[2025-06-03 09:32:13] 2025-06-03 13:31:58,596 | INFO     | ..............................
[2025-06-03 09:32:13] 2025-06-03 13:31:59,057 | INFO     | 
[2025-06-03 09:32:13] 2025-06-03 13:31:59,057 | INFO     | job summary report
[2025-06-03 09:32:13] 2025-06-03 13:31:59,057 | INFO     | --------------------------------------------------
[2025-06-03 09:32:13] 2025-06-03 13:31:59,057 | INFO     | PanDA job id: 6668690132
[2025-06-03 09:32:13] 2025-06-03 13:31:59,057 | INFO     | task id: 44871837
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | errors: (none)
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | pilot state: finished 
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | transexitcode: 0
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | exeerrorcode: 0
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | exeerrordiag: 
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | exitcode: 0
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | exitmsg: OK
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | cpuconsumptiontime: 38191 s
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | nevents: 400
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | neventsw: 0
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | pid: 303712
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | pgrp: 303712
[2025-06-03 09:32:13] 2025-06-03 13:31:59,058 | INFO     | corecount: 8
[2025-06-03 09:32:13] 2025-06-03 13:31:59,059 | INFO     | event service: False
[2025-06-03 09:32:13] 2025-06-03 13:31:59,059 | INFO     | sizes: {0: 2405063, 1: 2405262, 5: 2405468, 11: 2405524, 5546: 2432109, 5548: 2441050, 5551: 2441234, 5558: 2441404}
[2025-06-03 09:32:13] 2025-06-03 13:31:59,059 | INFO     | --------------------------------------------------
[2025-06-03 09:32:13] 2025-06-03 13:31:59,059 | INFO     | 
[2025-06-03 09:32:13] 2025-06-03 13:31:59,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-06-03 09:32:13] 2025-06-03 13:31:59,084 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:32:13] 2025-06-03 13:31:59,085 | INFO     | job 6668690132 has completed (purged errors)
[2025-06-03 09:32:13] 2025-06-03 13:31:59,086 | INFO     | overall cleanup function is called
[2025-06-03 09:32:13] 2025-06-03 13:32:00,094 | INFO     | --- collectZombieJob: --- 10, [303712]
[2025-06-03 09:32:13] 2025-06-03 13:32:00,095 | INFO     | zombie collector waiting for pid 303712
[2025-06-03 09:32:13] 2025-06-03 13:32:00,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:32:13] 2025-06-03 13:32:00,095 | INFO     | collected zombie processes
[2025-06-03 09:32:13] 2025-06-03 13:32:00,095 | INFO     | will attempt to kill all subprocesses of pid=303712
[2025-06-03 09:32:13] 2025-06-03 13:32:00,364 | INFO     | process IDs to be killed: [303712] (in reverse order)
[2025-06-03 09:32:13] 2025-06-03 13:32:00,456 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:32:13] 2025-06-03 13:32:00,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:32:13] 2025-06-03 13:32:00,465 | INFO     | did not find any defunct processes belonging to 303712
[2025-06-03 09:32:13] 2025-06-03 13:32:00,472 | INFO     | did not find any defunct processes belonging to 303712
[2025-06-03 09:32:13] 2025-06-03 13:32:00,472 | INFO     | ready for new job
[2025-06-03 09:32:13] 2025-06-03 13:32:00,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:32:13] 2025-06-03 13:32:00,474 | INFO     | **************************************
[2025-06-03 09:32:13] 2025-06-03 13:32:00,474 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:32:13] 2025-06-03 13:32:00,474 | INFO     | **************************************
[2025-06-03 09:32:13] 2025-06-03 13:32:00,474 | INFO     | 
[2025-06-03 09:32:13] 2025-06-03 13:32:00,489 | INFO     | architecture information:
[2025-06-03 09:32:13] 2025-06-03 13:32:00,489 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:32:13] 2025-06-03 13:32:00,502 | INFO     | cat /etc/os-release:
[2025-06-03 09:32:13] NAME="CentOS Linux"
[2025-06-03 09:32:13] VERSION="7 (Core)"
[2025-06-03 09:32:13] ID="centos"
[2025-06-03 09:32:13] ID_LIKE="rhel fedora"
[2025-06-03 09:32:13] VERSION_ID="7"
[2025-06-03 09:32:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:32:13] ANSI_COLOR="0;31"
[2025-06-03 09:32:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:32:13] HOME_URL="https://www.centos.org/"
[2025-06-03 09:32:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:32:13] 
[2025-06-03 09:32:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:32:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:32:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:32:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:32:13] 
[2025-06-03 09:32:13] 2025-06-03 13:32:00,502 | INFO     | **************************************
[2025-06-03 09:32:13] 2025-06-03 13:32:01,006 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-06-03 09:32:13] 2025-06-03 13:32:01,025 | INFO     | sufficient remaining disk space (82732646400 B)
[2025-06-03 09:32:13] 2025-06-03 13:32:01,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:32:13] 2025-06-03 13:32:01,026 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:32:13] 2025-06-03 13:32:01,026 | INFO     | update_server=False
[2025-06-03 09:32:13] 2025-06-03 13:32:01,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:32:13] 2025-06-03 13:32:01,334 | INFO     | all payload control threads have been joined
[2025-06-03 09:32:13] 2025-06-03 13:32:01,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:32:13] 2025-06-03 13:32:01,760 | INFO     | aborting loop
[2025-06-03 09:32:13] 2025-06-03 13:32:01,831 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:32:13] 2025-06-03 13:32:01,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:32:13] 2025-06-03 13:32:01,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:32:13] 2025-06-03 13:32:01,844 | INFO     | all job control threads have been joined
[2025-06-03 09:32:13] 2025-06-03 13:32:02,026 | INFO     | all data control threads have been joined
[2025-06-03 09:32:13] 2025-06-03 13:32:02,031 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:02,339 | INFO     | [payload] control thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:02,417 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:32:13] 2025-06-03 13:32:02,429 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:02,631 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:02,679 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:32:13] 2025-06-03 13:32:02,764 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:02,850 | INFO     | [job] control thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:03,030 | INFO     | [data] control thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:03,131 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:03,324 | INFO     | [job] validate thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:03,327 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:03,328 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:03,386 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:03,457 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:03,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:32:13] 2025-06-03 13:32:04,424 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:04,700 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:06,685 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:32:13] 2025-06-03 13:32:08,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139682032547648)>', '<ExcThread(monitor, started 139681329051392)>']
[2025-06-03 09:32:13] 2025-06-03 13:32:08,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:32:13] 2025-06-03 13:32:08,870 | INFO     | [monitor] control thread has ended
[2025-06-03 09:32:13] 2025-06-03 13:32:13,068 | INFO     | all workflow threads have been joined
[2025-06-03 09:32:13] 2025-06-03 13:32:13,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:32:13] 2025-06-03 13:32:13,069 | INFO     | traces error code: 0
[2025-06-03 09:32:13] 2025-06-03 13:32:13,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:32:13] 2025-06-03 13:32:13,209 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:32:13] 2025-06-03 13:32:13,212 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:32:13] 2025-06-03 13:32:13,215 [wrapper] pilotpid: 297138
[2025-06-03 09:32:13] 2025-06-03 13:32:13,217 [wrapper] Pilot exit status: 0
[2025-06-03 09:32:13] 2025-06-03 13:32:13,229 [wrapper] pandaids: 6668690132
[2025-06-03 09:32:13] 2025-06-03 13:32:13,306 [wrapper] cleanup supervisor_pilot  654616 297139
[2025-06-03 09:32:13] 2025-06-03 13:32:13,310 [wrapper] Test setup, not cleaning
[2025-06-03 09:32:13] 2025-06-03 13:32:13,313 [wrapper] apfmon messages muted
[2025-06-03 09:32:13] 2025-06-03 13:32:13,316 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:32:13] 2025-06-03 13:32:13,319 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:32:13]  *** Error codes and diagnostics ***
[2025-06-03 09:32:13]     "exeErrorCode": 0,
[2025-06-03 09:32:13]     "exeErrorDiag": "",
[2025-06-03 09:32:13]     "pilotErrorCode": 0,
[2025-06-03 09:32:13]     "pilotErrorDiag": "",
[2025-06-03 09:32:13]  *** Listing of results directory ***
[2025-06-03 09:32:13] total 419420
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas    495897 May 28 13:15 pilot3.tar.gz
[2025-06-03 09:32:13] -rwx------. 1 boincer umatlas     37140 May 28 13:20 runpilot2-wrapper.sh
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas      5111 May 28 13:20 queuedata.json
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas       100 Jun  3 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:32:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 07:58 run_atlas
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas       105 Jun  3 07:58 job.xml
[2025-06-03 09:32:13] -rw-r--r--. 2 boincer umatlas 224165342 Jun  3 07:58 EVNT.44871834._003418.pool.root.1
[2025-06-03 09:32:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 07:58 start_atlas.sh
[2025-06-03 09:32:13] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 07:58 shared
[2025-06-03 09:32:13] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 07:58 input.tar.gz
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas         0 Jun  3 07:58 boinc_lockfile
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas      2559 Jun  3 07:58 pandaJob.out
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas    982666 Jun  3 07:59 agis_schedconf.cvmfs.json
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas   1603667 Jun  3 07:59 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:32:13] drwx------. 4 boincer umatlas      4096 Jun  3 07:59 pilot3
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas      6899 Jun  3 09:30 init_data.xml
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas 199785136 Jun  3 09:31 HITS.44871837._087735.pool.root.1
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas       529 Jun  3 09:31 boinc_task_state.xml
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas      1037 Jun  3 09:31 memory_monitor_summary.json
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas    312358 Jun  3 09:31 log.44871837._087735.job.log.tgz.1
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas        95 Jun  3 09:31 pilot_heartbeat.json
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas      7678 Jun  3 09:31 heartbeat.json
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 09:32 boinc_mmap_file
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas        27 Jun  3 09:32 wrapper_checkpoint.txt
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas      4353 Jun  3 09:32 pilotlog.txt
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas    539673 Jun  3 09:32 log.44871837._087735.job.log.1
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas       357 Jun  3 09:32 output.list
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas       620 Jun  3 09:32 runtime_log
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas    870400 Jun  3 09:32 result.tar.gz
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas      8659 Jun  3 09:32 runtime_log.err
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas       651 Jun  3 09:32 QYuLDmDdZe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSqTKDmPcMObm.diag
[2025-06-03 09:32:13] -rw-r--r--. 1 boincer umatlas     21392 Jun  3 09:32 stderr.txt
[2025-06-03 09:32:13] HITS file was successfully produced:
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas 199785136 Jun  3 09:31 shared/HITS.pool.root.1
[2025-06-03 09:32:13]  *** Contents of shared directory: ***
[2025-06-03 09:32:13] total 415392
[2025-06-03 09:32:13] -rw-r--r--. 2 boincer umatlas 224165342 Jun  3 07:58 ATLAS.root_0
[2025-06-03 09:32:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 07:58 start_atlas.sh
[2025-06-03 09:32:13] -rw-r--r--. 2 boincer umatlas    508876 Jun  3 07:58 input.tar.gz
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas 199785136 Jun  3 09:31 HITS.pool.root.1
[2025-06-03 09:32:13] -rw-------. 1 boincer umatlas    870400 Jun  3 09:32 result.tar.gz
09:32:15 (293572): run_atlas exited; CPU time 38292.438475
09:32:15 (293572): called boinc_finish(0)

</stderr_txt>
]]>

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