Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:30:59 (2472434): wrapper (7.7.26015): starting
07:30:59 (2472434): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 07:30:59] Arguments: --nthreads 4
[2025-06-05 07:30:59] Threads: 4
[2025-06-05 07:30:59] Checking for CVMFS
[2025-06-05 07:30:59] No cvmfs_config command found, will try listing directly
[2025-06-05 07:30:59] CVMFS is ok
[2025-06-05 07:30:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 07:30:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 07:30:59] Further information can be found at the LHC@home message board.
[2025-06-05 07:30:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 07:30:59] Checking for apptainer binary...
[2025-06-05 07:30:59] which: no apptainer in ((null))
[2025-06-05 07:30:59] apptainer is not installed, using version from CVMFS
[2025-06-05 07:30:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 07:30:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-06-05 07:30:59] apptainer works
[2025-06-05 07:30:59] Set ATHENA_PROC_NUMBER=4
[2025-06-05 07:30:59] Set ATHENA_CORE_NUMBER=4
[2025-06-05 07:30:59] Starting ATLAS job with PandaID=6677546646
[2025-06-05 07:30:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 10:11:34]  *** The last 200 lines of the pilot log: ***
[2025-06-05 10:11:34] 2025-06-05 08:11:10,741 | INFO     | executing command: lscpu
[2025-06-05 10:11:34] 2025-06-05 08:11:10,804 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 10:11:34] 2025-06-05 08:11:11,313 | INFO     | monitor loop #697: job 0:6677546646 is in state 'finished'
[2025-06-05 10:11:34] 2025-06-05 08:11:11,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:11:34] 2025-06-05 08:11:13,816 | INFO     | monitor loop #698: job 0:6677546646 is in state 'finished'
[2025-06-05 10:11:34] 2025-06-05 08:11:13,816 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 10:11:34] 2025-06-05 08:11:15,151 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 10:11:34] 2025-06-05 08:11:15,152 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6677546646/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 10:11:34] 2025-06-05 08:11:15,152 | INFO     | extracted standard info from prmon json
[2025-06-05 10:11:34] 2025-06-05 08:11:15,153 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 10:11:34] 2025-06-05 08:11:15,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 10:11:34] 2025-06-05 08:11:15,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 10:11:34] 2025-06-05 08:11:15,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 10:11:34] 2025-06-05 08:11:15,157 | INFO     | fitting pss+swap vs Time
[2025-06-05 10:11:34] 2025-06-05 08:11:15,158 | INFO     | sum of square deviations: 1199940638.0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,159 | INFO     | sum of deviations: 19817609484.000004
[2025-06-05 10:11:34] 2025-06-05 08:11:15,159 | INFO     | mean x: 1749106257.0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,159 | INFO     | mean y: 2307892.7070063693
[2025-06-05 10:11:34] 2025-06-05 08:11:15,159 | INFO     | -- intersect: -28885041739.03949
[2025-06-05 10:11:34] 2025-06-05 08:11:15,159 | INFO     | intersect: -28885041739.03949
[2025-06-05 10:11:34] 2025-06-05 08:11:15,159 | INFO     | chi2: 1.7318010915705735
[2025-06-05 10:11:34] 2025-06-05 08:11:15,160 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,161 | INFO     | sum of deviations: 19103223233.999996
[2025-06-05 10:11:34] 2025-06-05 08:11:15,161 | INFO     | mean x: 1749106104.5
[2025-06-05 10:11:34] 2025-06-05 08:11:15,161 | INFO     | mean y: 2306911.6447368423
[2025-06-05 10:11:34] 2025-06-05 08:11:15,161 | INFO     | -- intersect: -30683137410.99332
[2025-06-05 10:11:34] 2025-06-05 08:11:15,161 | INFO     | intersect: -30683137410.99332
[2025-06-05 10:11:34] 2025-06-05 08:11:15,161 | INFO     | chi2: 1.7339184629980005
[2025-06-05 10:11:34] 2025-06-05 08:11:15,161 | INFO     | current chi2=1.7339184629980005 (change=-0.12226412361864918 %)
[2025-06-05 10:11:34] 2025-06-05 08:11:15,162 | INFO     | right removable region: 151
[2025-06-05 10:11:34] 2025-06-05 08:11:15,162 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,163 | INFO     | sum of deviations: -5973536172.499999
[2025-06-05 10:11:34] 2025-06-05 08:11:15,163 | INFO     | mean x: 1749106409.5
[2025-06-05 10:11:34] 2025-06-05 08:11:15,163 | INFO     | mean y: 2342878.572368421
[2025-06-05 10:11:34] 2025-06-05 08:11:15,163 | INFO     | -- intersect: 9597615956.221304
[2025-06-05 10:11:34] 2025-06-05 08:11:15,163 | INFO     | intersect: 9597615956.221304
[2025-06-05 10:11:34] 2025-06-05 08:11:15,163 | INFO     | chi2: 0.017705270861961473
[2025-06-05 10:11:34] 2025-06-05 08:11:15,164 | INFO     | current chi2=0.017705270861961473 (change=98.97763831261335 %)
[2025-06-05 10:11:34] 2025-06-05 08:11:15,164 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,165 | INFO     | sum of deviations: -5905994502.0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,165 | INFO     | mean x: 1749106562.0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,165 | INFO     | mean y: 2342751.034013605
[2025-06-05 10:11:34] 2025-06-05 08:11:15,165 | INFO     | -- intersect: 10490494866.379885
[2025-06-05 10:11:34] 2025-06-05 08:11:15,165 | INFO     | intersect: 10490494866.379885
[2025-06-05 10:11:34] 2025-06-05 08:11:15,165 | INFO     | chi2: 0.0144761112531588
[2025-06-05 10:11:34] 2025-06-05 08:11:15,165 | INFO     | current chi2=0.0144761112531588 (change=18.23840840379514 %)
[2025-06-05 10:11:34] 2025-06-05 08:11:15,166 | INFO     | left removable region: 20
[2025-06-05 10:11:34] 2025-06-05 08:11:15,166 | INFO     | sum of square deviations: 697054930.0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,167 | INFO     | sum of deviations: -3007161896.000001
[2025-06-05 10:11:34] 2025-06-05 08:11:15,167 | INFO     | mean x: 1749106684.0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,167 | INFO     | mean y: 2338054.3664122135
[2025-06-05 10:11:34] 2025-06-05 08:11:15,167 | INFO     | -- intersect: 7548152230.250247
[2025-06-05 10:11:34] 2025-06-05 08:11:15,167 | INFO     | intersect: 7548152230.250247
[2025-06-05 10:11:34] 2025-06-05 08:11:15,167 | INFO     | chi2: 0.010178588002864523
[2025-06-05 10:11:34] 2025-06-05 08:11:15,167 | INFO     | -- intersect: 7548152230.250247
[2025-06-05 10:11:34] 2025-06-05 08:11:15,167 | INFO     | current memory leak: -4.31 B/s (using 131 data points, chi2=0.01)
[2025-06-05 10:11:34] 2025-06-05 08:11:15,168 | INFO     | ..............................
[2025-06-05 10:11:34] 2025-06-05 08:11:15,168 | INFO     | . Timing measurements:
[2025-06-05 10:11:34] 2025-06-05 08:11:15,168 | INFO     | . get job = 0 s
[2025-06-05 10:11:34] 2025-06-05 08:11:15,168 | INFO     | . initial setup = 1 s
[2025-06-05 10:11:34] 2025-06-05 08:11:15,168 | INFO     | . payload setup = 7 s
[2025-06-05 10:11:34] 2025-06-05 08:11:15,168 | INFO     | . stage-in = 0 s
[2025-06-05 10:11:34] 2025-06-05 08:11:15,169 | INFO     | . payload execution = 9568 s
[2025-06-05 10:11:34] 2025-06-05 08:11:15,169 | INFO     | . stage-out = 0 s
[2025-06-05 10:11:34] 2025-06-05 08:11:15,169 | INFO     | . log creation = 0 s
[2025-06-05 10:11:34] 2025-06-05 08:11:15,169 | INFO     | ..............................
[2025-06-05 10:11:34] 2025-06-05 08:11:15,273 | INFO     | 
[2025-06-05 10:11:34] 2025-06-05 08:11:15,274 | INFO     | job summary report
[2025-06-05 10:11:34] 2025-06-05 08:11:15,274 | INFO     | --------------------------------------------------
[2025-06-05 10:11:34] 2025-06-05 08:11:15,274 | INFO     | PanDA job id: 6677546646
[2025-06-05 10:11:34] 2025-06-05 08:11:15,274 | INFO     | task id: 45006595
[2025-06-05 10:11:34] 2025-06-05 08:11:15,274 | INFO     | errors: (none)
[2025-06-05 10:11:34] 2025-06-05 08:11:15,274 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 10:11:34] 2025-06-05 08:11:15,274 | INFO     | pilot state: finished 
[2025-06-05 10:11:34] 2025-06-05 08:11:15,274 | INFO     | transexitcode: 0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,274 | INFO     | exeerrorcode: 0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | exeerrordiag: 
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | exitcode: 0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | exitmsg: OK
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | cpuconsumptiontime: 36513 s
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | nevents: 400
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | neventsw: 0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | pid: 2495592
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | pgrp: 2495592
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | corecount: 4
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | event service: False
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | sizes: {0: 2397181, 1: 2397380, 6: 2397586, 12: 2397614, 9579: 2425900, 9580: 2425899, 9582: 2435046, 9583: 2435130, 9589: 2435300}
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | --------------------------------------------------
[2025-06-05 10:11:34] 2025-06-05 08:11:15,275 | INFO     | 
[2025-06-05 10:11:34] 2025-06-05 08:11:15,276 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-06-05 10:11:34] 2025-06-05 08:11:15,296 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,296 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 10:11:34] 2025-06-05 08:11:15,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 10:11:34] 2025-06-05 08:11:15,298 | INFO     | job 6677546646 has completed (purged errors)
[2025-06-05 10:11:34] 2025-06-05 08:11:15,298 | INFO     | overall cleanup function is called
[2025-06-05 10:11:34] 2025-06-05 08:11:16,306 | INFO     | --- collectZombieJob: --- 10, [2495592]
[2025-06-05 10:11:34] 2025-06-05 08:11:16,306 | INFO     | zombie collector waiting for pid 2495592
[2025-06-05 10:11:34] 2025-06-05 08:11:16,307 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 10:11:34] 2025-06-05 08:11:16,307 | INFO     | collected zombie processes
[2025-06-05 10:11:34] 2025-06-05 08:11:16,307 | INFO     | will attempt to kill all subprocesses of pid=2495592
[2025-06-05 10:11:34] 2025-06-05 08:11:16,664 | INFO     | process IDs to be killed: [2495592] (in reverse order)
[2025-06-05 10:11:34] 2025-06-05 08:11:16,775 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 10:11:34] 2025-06-05 08:11:16,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 10:11:34] 2025-06-05 08:11:16,787 | INFO     | did not find any defunct processes belonging to 2495592
[2025-06-05 10:11:34] 2025-06-05 08:11:16,798 | INFO     | did not find any defunct processes belonging to 2495592
[2025-06-05 10:11:34] 2025-06-05 08:11:16,799 | INFO     | ready for new job
[2025-06-05 10:11:34] 2025-06-05 08:11:16,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 10:11:34] 2025-06-05 08:11:16,800 | INFO     | **************************************
[2025-06-05 10:11:34] 2025-06-05 08:11:16,801 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 10:11:34] 2025-06-05 08:11:16,801 | INFO     | **************************************
[2025-06-05 10:11:34] 2025-06-05 08:11:16,801 | INFO     | 
[2025-06-05 10:11:34] 2025-06-05 08:11:16,804 | INFO     | architecture information:
[2025-06-05 10:11:34] 2025-06-05 08:11:16,805 | INFO     | executing command: cat /etc/os-release
[2025-06-05 10:11:34] 2025-06-05 08:11:16,819 | INFO     | cat /etc/os-release:
[2025-06-05 10:11:34] NAME="CentOS Linux"
[2025-06-05 10:11:34] VERSION="7 (Core)"
[2025-06-05 10:11:34] ID="centos"
[2025-06-05 10:11:34] ID_LIKE="rhel fedora"
[2025-06-05 10:11:34] VERSION_ID="7"
[2025-06-05 10:11:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 10:11:34] ANSI_COLOR="0;31"
[2025-06-05 10:11:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 10:11:34] HOME_URL="https://www.centos.org/"
[2025-06-05 10:11:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 10:11:34] 
[2025-06-05 10:11:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 10:11:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 10:11:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 10:11:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 10:11:34] 
[2025-06-05 10:11:34] 2025-06-05 08:11:16,820 | INFO     | **************************************
[2025-06-05 10:11:34] 2025-06-05 08:11:17,323 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-06-05 10:11:34] 2025-06-05 08:11:17,338 | INFO     | sufficient remaining disk space (664242487296 B)
[2025-06-05 10:11:34] 2025-06-05 08:11:17,338 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 10:11:34] 2025-06-05 08:11:17,338 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 10:11:34] 2025-06-05 08:11:17,338 | INFO     | update_server=False
[2025-06-05 10:11:34] 2025-06-05 08:11:17,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 10:11:34] 2025-06-05 08:11:17,339 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 10:11:34] 2025-06-05 08:11:17,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:11:34] 2025-06-05 08:11:17,340 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 10:11:34] 2025-06-05 08:11:17,340 | INFO     | aborting loop
[2025-06-05 10:11:34] 2025-06-05 08:11:17,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 10:11:34] 2025-06-05 08:11:17,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 10:11:34] 2025-06-05 08:11:17,606 | INFO     | all data control threads have been joined
[2025-06-05 10:11:34] 2025-06-05 08:11:18,343 | INFO     | [job] retrieve thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:18,345 | INFO     | [job] job monitor thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:18,385 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:18,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 10:11:34] 2025-06-05 08:11:18,576 | INFO     | all payload control threads have been joined
[2025-06-05 10:11:34] 2025-06-05 08:11:18,611 | INFO     | [data] control thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:18,892 | INFO     | all job control threads have been joined
[2025-06-05 10:11:34] 2025-06-05 08:11:18,977 | INFO     | [data] copytool_in thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:19,215 | INFO     | [payload] failed_post thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:19,253 | INFO     | [job] validate thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:19,558 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:19,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 10:11:34] 2025-06-05 08:11:19,581 | INFO     | [payload] control thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:19,724 | INFO     | [payload] validate_post thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:19,735 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:19,897 | INFO     | [job] control thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:20,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 10:11:34] 2025-06-05 08:11:20,578 | INFO     | [data] copytool_out thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:21,289 | INFO     | [job] queue monitor thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:23,583 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:28,262 | INFO     | job.realtimelogging is not enabled
[2025-06-05 10:11:34] 2025-06-05 08:11:29,267 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 10:11:34] 2025-06-05 08:11:29,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22750373824320)>', '<ExcThread(monitor, started 22750125041408)>']
[2025-06-05 10:11:34] 2025-06-05 08:11:30,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 10:11:34] 2025-06-05 08:11:30,406 | INFO     | [monitor] control thread has ended
[2025-06-05 10:11:34] 2025-06-05 08:11:34,468 | INFO     | all workflow threads have been joined
[2025-06-05 10:11:34] 2025-06-05 08:11:34,469 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 10:11:34] 2025-06-05 08:11:34,469 | INFO     | traces error code: 0
[2025-06-05 10:11:34] 2025-06-05 08:11:34,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 10:11:34] 2025-06-05 08:11:34,615 [wrapper] ==== pilot stdout END ====
[2025-06-05 10:11:34] 2025-06-05 08:11:34,618 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 10:11:34] 2025-06-05 08:11:34,621 [wrapper] pilotpid: 2479238
[2025-06-05 10:11:34] 2025-06-05 08:11:34,623 [wrapper] Pilot exit status: 0
[2025-06-05 10:11:34] 2025-06-05 08:11:34,633 [wrapper] pandaids: 6677546646
[2025-06-05 10:11:34] 2025-06-05 08:11:34,701 [wrapper] cleanup supervisor_pilot 2736282 2479239
[2025-06-05 10:11:34] 2025-06-05 08:11:34,704 [wrapper] Test setup, not cleaning
[2025-06-05 10:11:34] 2025-06-05 08:11:34,707 [wrapper] apfmon messages muted
[2025-06-05 10:11:34] 2025-06-05 08:11:34,709 [wrapper] ==== wrapper stdout END ====
[2025-06-05 10:11:34] 2025-06-05 08:11:34,712 [wrapper] ==== wrapper stderr END ====
[2025-06-05 10:11:34]  *** Error codes and diagnostics ***
[2025-06-05 10:11:34]     "exeErrorCode": 0,
[2025-06-05 10:11:34]     "exeErrorDiag": "",
[2025-06-05 10:11:34]     "pilotErrorCode": 0,
[2025-06-05 10:11:34]     "pilotErrorDiag": "",
[2025-06-05 10:11:34]  *** Listing of results directory ***
[2025-06-05 10:11:34] total 386184
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc    495897 Jun  3 10:07 pilot3.tar.gz
[2025-06-05 10:11:34] -rwx------ 1 boinc boinc     37140 Jun  3 10:36 runpilot2-wrapper.sh
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc      5111 Jun  3 10:36 queuedata.json
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc       100 Jun  5 07:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 10:11:34] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 07:30 run_atlas
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc       105 Jun  5 07:30 job.xml
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc      6632 Jun  5 07:30 init_data.xml
[2025-06-05 10:11:34] -rw-r--r-- 2 boinc boinc 213014704 Jun  5 07:30 EVNT.45006593._001030.pool.root.1
[2025-06-05 10:11:34] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:30 start_atlas.sh
[2025-06-05 10:11:34] drwxrwx--x 2 boinc boinc      4096 Jun  5 07:30 shared
[2025-06-05 10:11:34] -rw-r--r-- 2 boinc boinc    508878 Jun  5 07:30 input.tar.gz
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc         0 Jun  5 07:30 boinc_lockfile
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc      2524 Jun  5 07:30 pandaJob.out
[2025-06-05 10:11:34] -rw------- 1 boinc boinc    987109 Jun  5 07:31 agis_schedconf.cvmfs.json
[2025-06-05 10:11:34] -rw------- 1 boinc boinc   1598969 Jun  5 07:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 10:11:34] drwx------ 4 boinc boinc      4096 Jun  5 07:31 pilot3
[2025-06-05 10:11:34] -rw------- 1 boinc boinc 176210385 Jun  5 10:10 HITS.45006595._025749.pool.root.1
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc       528 Jun  5 10:10 boinc_task_state.xml
[2025-06-05 10:11:34] -rw------- 1 boinc boinc        95 Jun  5 10:10 pilot_heartbeat.json
[2025-06-05 10:11:34] -rw------- 1 boinc boinc      1034 Jun  5 10:11 memory_monitor_summary.json
[2025-06-05 10:11:34] -rw------- 1 boinc boinc    286509 Jun  5 10:11 log.45006595._025749.job.log.tgz.1
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc      8192 Jun  5 10:11 boinc_mmap_file
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc        27 Jun  5 10:11 wrapper_checkpoint.txt
[2025-06-05 10:11:34] -rw------- 1 boinc boinc      7718 Jun  5 10:11 heartbeat.json
[2025-06-05 10:11:34] -rw------- 1 boinc boinc      4558 Jun  5 10:11 pilotlog.txt
[2025-06-05 10:11:34] -rw------- 1 boinc boinc    907828 Jun  5 10:11 log.45006595._025749.job.log.1
[2025-06-05 10:11:34] -rw------- 1 boinc boinc       357 Jun  5 10:11 output.list
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc       620 Jun  5 10:11 runtime_log
[2025-06-05 10:11:34] -rw------- 1 boinc boinc   1218560 Jun  5 10:11 result.tar.gz
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc      9025 Jun  5 10:11 runtime_log.err
[2025-06-05 10:11:34] -rw------- 1 boinc boinc       663 Jun  5 10:11 D48NDmdJcg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmyyXKDmLc55gm.diag
[2025-06-05 10:11:34] -rw-r--r-- 1 boinc boinc     20939 Jun  5 10:11 stderr.txt
[2025-06-05 10:11:34] HITS file was successfully produced:
[2025-06-05 10:11:34] -rw------- 1 boinc boinc 176210385 Jun  5 10:10 shared/HITS.pool.root.1
[2025-06-05 10:11:34]  *** Contents of shared directory: ***
[2025-06-05 10:11:34] total 381824
[2025-06-05 10:11:34] -rw-r--r-- 2 boinc boinc 213014704 Jun  5 07:30 ATLAS.root_0
[2025-06-05 10:11:34] -rw-r--r-- 2 boinc boinc     15093 Jun  5 07:30 start_atlas.sh
[2025-06-05 10:11:34] -rw-r--r-- 2 boinc boinc    508878 Jun  5 07:30 input.tar.gz
[2025-06-05 10:11:34] -rw------- 1 boinc boinc 176210385 Jun  5 10:10 HITS.pool.root.1
[2025-06-05 10:11:34] -rw------- 1 boinc boinc   1218560 Jun  5 10:11 result.tar.gz
10:11:36 (2472434): run_atlas exited; CPU time 36911.054603
10:11:36 (2472434): called boinc_finish(0)

</stderr_txt>
]]>

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