Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:40:47 (4655): wrapper (7.7.26015): starting
21:40:47 (4655): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:40:47] Arguments: --nthreads 8
[2025-06-03 21:40:47] Threads: 8
[2025-06-03 21:40:47] Checking for CVMFS
[2025-06-03 21:40:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:40:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:40:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:40:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:40:49] 2.11.2.0 7420 32188 97236 146753 2 59 16419707 25165824 4269 130560 0 15850706 99.792 19315644 2288 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 21:40:49] CVMFS is ok
[2025-06-03 21:40:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:40:49] Checking for apptainer binary...
[2025-06-03 21:40:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:40:49] Running /usr/bin/apptainer --version
[2025-06-03 21:40:49] apptainer version 1.3.2-1.el7
[2025-06-03 21:40:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:41:01] cg-vwn450.simple-grid.lan
[2025-06-03 21:41:01] apptainer works
[2025-06-03 21:41:01] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:41:01] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:41:01] Starting ATLAS job with PandaID=6677549178
[2025-06-03 21:41:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:47:19]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:47:19] 2025-06-03 23:33:07,549 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6677549178/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:47:19] 2025-06-03 23:33:07,550 | INFO     | extracted standard info from prmon json
[2025-06-04 01:47:19] 2025-06-03 23:33:07,550 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:47:19] 2025-06-03 23:33:07,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:47:19] 2025-06-03 23:33:07,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:47:19] 2025-06-03 23:33:07,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:47:19] 2025-06-03 23:33:07,555 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:47:19] 2025-06-03 23:33:07,556 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,558 | INFO     | sum of deviations: 98755551059.99998
[2025-06-04 01:47:19] 2025-06-03 23:33:07,558 | INFO     | mean x: 1748986911.0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,558 | INFO     | mean y: 2422084.751152074
[2025-06-04 01:47:19] 2025-06-03 23:33:07,558 | INFO     | -- intersect: -54510526499.13924
[2025-06-04 01:47:19] 2025-06-03 23:33:07,558 | INFO     | intersect: -54510526499.13924
[2025-06-04 01:47:19] 2025-06-03 23:33:07,558 | INFO     | chi2: 6.946771971916057
[2025-06-04 01:47:19] 2025-06-03 23:33:07,559 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,561 | INFO     | sum of deviations: 96242000127.0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,561 | INFO     | mean x: 1748986758.5
[2025-06-04 01:47:19] 2025-06-03 23:33:07,561 | INFO     | mean y: 2420293.349056604
[2025-06-04 01:47:19] 2025-06-03 23:33:07,561 | INFO     | -- intersect: -56971331321.65471
[2025-06-04 01:47:19] 2025-06-03 23:33:07,561 | INFO     | intersect: -56971331321.65471
[2025-06-04 01:47:19] 2025-06-03 23:33:07,561 | INFO     | chi2: 6.962210796169625
[2025-06-04 01:47:19] 2025-06-03 23:33:07,562 | INFO     | current chi2=6.962210796169625 (change=-0.22224458087847376 %)
[2025-06-04 01:47:19] 2025-06-03 23:33:07,562 | INFO     | right removable region: 211
[2025-06-04 01:47:19] 2025-06-03 23:33:07,562 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,564 | INFO     | sum of deviations: 23118570590.499992
[2025-06-04 01:47:19] 2025-06-03 23:33:07,564 | INFO     | mean x: 1748987063.5
[2025-06-04 01:47:19] 2025-06-03 23:33:07,564 | INFO     | mean y: 2475946.202830189
[2025-06-04 01:47:19] 2025-06-03 23:33:07,564 | INFO     | -- intersect: -13683356917.543694
[2025-06-04 01:47:19] 2025-06-03 23:33:07,564 | INFO     | intersect: -13683356917.543694
[2025-06-04 01:47:19] 2025-06-03 23:33:07,565 | INFO     | chi2: 1.8250371081161303
[2025-06-04 01:47:19] 2025-06-03 23:33:07,565 | INFO     | current chi2=1.8250371081161303 (change=73.72827097975481 %)
[2025-06-04 01:47:19] 2025-06-03 23:33:07,565 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,567 | INFO     | sum of deviations: -18201991971.000004
[2025-06-04 01:47:19] 2025-06-03 23:33:07,567 | INFO     | mean x: 1748987216.0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,567 | INFO     | mean y: 2506646.8454106282
[2025-06-04 01:47:19] 2025-06-03 23:33:07,567 | INFO     | -- intersect: 11577646015.303526
[2025-06-04 01:47:19] 2025-06-03 23:33:07,567 | INFO     | intersect: 11577646015.303526
[2025-06-04 01:47:19] 2025-06-03 23:33:07,567 | INFO     | chi2: 0.16161613953504084
[2025-06-04 01:47:19] 2025-06-03 23:33:07,568 | INFO     | current chi2=0.16161613953504084 (change=91.14450118212298 %)
[2025-06-04 01:47:19] 2025-06-03 23:33:07,568 | INFO     | sum of square deviations: 2555770710.5
[2025-06-04 01:47:19] 2025-06-03 23:33:07,569 | INFO     | sum of deviations: -18855413966.999996
[2025-06-04 01:47:19] 2025-06-03 23:33:07,570 | INFO     | mean x: 1748987368.5
[2025-06-04 01:47:19] 2025-06-03 23:33:07,570 | INFO     | mean y: 2507099.3960396037
[2025-06-04 01:47:19] 2025-06-03 23:33:07,570 | INFO     | -- intersect: 12905808917.76214
[2025-06-04 01:47:19] 2025-06-03 23:33:07,570 | INFO     | intersect: 12905808917.76214
[2025-06-04 01:47:19] 2025-06-03 23:33:07,570 | INFO     | chi2: 0.13160924447051825
[2025-06-04 01:47:19] 2025-06-03 23:33:07,570 | INFO     | current chi2=0.13160924447051825 (change=18.56676885789407 %)
[2025-06-04 01:47:19] 2025-06-03 23:33:07,571 | INFO     | left removable region: 30
[2025-06-04 01:47:19] 2025-06-03 23:33:07,571 | INFO     | sum of square deviations: 1838657730.0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,572 | INFO     | sum of deviations: 2512640813.0000024
[2025-06-04 01:47:19] 2025-06-03 23:33:07,572 | INFO     | mean x: 1748987643.0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,572 | INFO     | mean y: 2487887.4861878455
[2025-06-04 01:47:19] 2025-06-03 23:33:07,573 | INFO     | -- intersect: -2387613141.939489
[2025-06-04 01:47:19] 2025-06-03 23:33:07,573 | INFO     | intersect: -2387613141.939489
[2025-06-04 01:47:19] 2025-06-03 23:33:07,573 | INFO     | chi2: 0.013749296606036692
[2025-06-04 01:47:19] 2025-06-03 23:33:07,573 | INFO     | -- intersect: -2387613141.939489
[2025-06-04 01:47:19] 2025-06-03 23:33:07,573 | INFO     | current memory leak: 1.37 B/s (using 181 data points, chi2=0.01)
[2025-06-04 01:47:19] 2025-06-03 23:33:07,574 | INFO     | ..............................
[2025-06-04 01:47:19] 2025-06-03 23:33:07,574 | INFO     | . Timing measurements:
[2025-06-04 01:47:19] 2025-06-03 23:33:07,574 | INFO     | . get job = 0 s
[2025-06-04 01:47:19] 2025-06-03 23:33:07,574 | INFO     | . initial setup = 5 s
[2025-06-04 01:47:19] 2025-06-03 23:33:07,574 | INFO     | . payload setup = 162 s
[2025-06-04 01:47:19] 2025-06-03 23:33:07,574 | INFO     | . stage-in = 0 s
[2025-06-04 01:47:19] 2025-06-03 23:33:07,575 | INFO     | . payload execution = 13370 s
[2025-06-04 01:47:19] 2025-06-03 23:33:07,575 | INFO     | . stage-out = 1 s
[2025-06-04 01:47:19] 2025-06-03 23:33:07,575 | INFO     | . log creation = 0 s
[2025-06-04 01:47:19] 2025-06-03 23:33:07,575 | INFO     | ..............................
[2025-06-04 01:47:19] 2025-06-03 23:33:07,723 | INFO     | 
[2025-06-04 01:47:19] 2025-06-03 23:33:07,723 | INFO     | job summary report
[2025-06-04 01:47:19] 2025-06-03 23:33:07,723 | INFO     | --------------------------------------------------
[2025-06-04 01:47:19] 2025-06-03 23:33:07,723 | INFO     | PanDA job id: 6677549178
[2025-06-04 01:47:19] 2025-06-03 23:33:07,723 | INFO     | task id: 45006595
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | errors: (none)
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | pilot state: finished 
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | transexitcode: 0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | exeerrorcode: 0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | exeerrordiag: 
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | exitcode: 0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | exitmsg: OK
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | cpuconsumptiontime: 48942 s
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | nevents: 400
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | neventsw: 0
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | pid: 15214
[2025-06-04 01:47:19] 2025-06-03 23:33:07,724 | INFO     | pgrp: 15214
[2025-06-04 01:47:19] 2025-06-03 23:33:07,725 | INFO     | corecount: 8
[2025-06-04 01:47:19] 2025-06-03 23:33:07,725 | INFO     | event service: False
[2025-06-04 01:47:19] 2025-06-03 23:33:07,725 | INFO     | sizes: {0: 2405185, 1: 2405185, 12: 2405213, 22: 2405241, 33: 2405269, 44: 2405325, 55: 2405481, 65: 2405509, 76: 2405537, 87: 2405593, 88: 2405827, 98: 2406135, 1
[2025-06-04 01:47:19] 2025-06-03 23:33:07,725 | INFO     | --------------------------------------------------
[2025-06-04 01:47:19] 2025-06-03 23:33:07,725 | INFO     | 
[2025-06-04 01:47:19] 2025-06-03 23:33:07,725 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-04 01:47:19] 2025-06-03 23:33:07,898 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,899 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,899 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,899 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,901 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,901 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,901 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:47:19] 2025-06-03 23:33:07,901 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,901 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:47:19] 2025-06-03 23:33:07,901 | INFO     | job 6677549178 has completed (purged errors)
[2025-06-04 01:47:19] 2025-06-03 23:33:07,901 | INFO     | overall cleanup function is called
[2025-06-04 01:47:19] 2025-06-03 23:33:08,910 | INFO     | --- collectZombieJob: --- 10, [15214]
[2025-06-04 01:47:19] 2025-06-03 23:33:08,910 | INFO     | zombie collector waiting for pid 15214
[2025-06-04 01:47:19] 2025-06-03 23:33:08,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:47:19] 2025-06-03 23:33:08,910 | INFO     | collected zombie processes
[2025-06-04 01:47:19] 2025-06-03 23:33:08,910 | INFO     | will attempt to kill all subprocesses of pid=15214
[2025-06-04 01:47:19] 2025-06-03 23:33:09,010 | INFO     | process IDs to be killed: [15214] (in reverse order)
[2025-06-04 01:47:19] 2025-06-03 23:33:09,275 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:47:19] 2025-06-03 23:33:09,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:47:19] 2025-06-03 23:33:09,279 | INFO     | did not find any defunct processes belonging to 15214
[2025-06-04 01:47:19] 2025-06-03 23:33:09,282 | INFO     | did not find any defunct processes belonging to 15214
[2025-06-04 01:47:19] 2025-06-03 23:33:09,283 | INFO     | ready for new job
[2025-06-04 01:47:19] 2025-06-03 23:33:09,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:47:19] 2025-06-03 23:33:09,285 | INFO     | **************************************
[2025-06-04 01:47:19] 2025-06-03 23:33:09,285 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:47:19] 2025-06-03 23:33:09,285 | INFO     | **************************************
[2025-06-04 01:47:19] 2025-06-03 23:33:09,285 | INFO     | 
[2025-06-04 01:47:19] 2025-06-03 23:33:09,286 | INFO     | pilot is running in a VM
[2025-06-04 01:47:19] 2025-06-03 23:33:09,286 | INFO     | architecture information:
[2025-06-04 01:47:19] 2025-06-03 23:33:09,292 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:47:19] 2025-06-03 23:33:09,377 | INFO     | cat /etc/os-release:
[2025-06-04 01:47:19] NAME="CentOS Linux"
[2025-06-04 01:47:19] VERSION="7 (Core)"
[2025-06-04 01:47:19] ID="centos"
[2025-06-04 01:47:19] ID_LIKE="rhel fedora"
[2025-06-04 01:47:19] VERSION_ID="7"
[2025-06-04 01:47:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:47:19] ANSI_COLOR="0;31"
[2025-06-04 01:47:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:47:19] HOME_URL="https://www.centos.org/"
[2025-06-04 01:47:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:47:19] 
[2025-06-04 01:47:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:47:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:47:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:47:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:47:19] 
[2025-06-04 01:47:19] 2025-06-03 23:33:09,378 | INFO     | **************************************
[2025-06-04 01:47:19] 2025-06-03 23:33:09,881 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-04 01:47:19] 2025-06-03 23:33:10,024 | INFO     | sufficient remaining disk space (497179164672 B)
[2025-06-04 01:47:19] 2025-06-03 23:33:10,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:47:19] 2025-06-03 23:33:10,025 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:47:19] 2025-06-03 23:33:10,025 | INFO     | update_server=False
[2025-06-04 01:47:19] 2025-06-03 23:33:10,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:47:19] 2025-06-03 23:33:10,325 | INFO     | all data control threads have been joined
[2025-06-04 01:47:19] 2025-06-03 23:33:10,493 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:47:19] 2025-06-03 23:33:10,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:47:19] 2025-06-03 23:33:10,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:47:19] 2025-06-03 23:33:10,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:47:19] 2025-06-03 23:33:10,531 | INFO     | aborting loop
[2025-06-04 01:47:19] 2025-06-03 23:33:10,542 | INFO     | all payload control threads have been joined
[2025-06-04 01:47:19] 2025-06-03 23:33:10,770 | INFO     | all job control threads have been joined
[2025-06-04 01:47:19] 2025-06-03 23:33:11,032 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:11,331 | INFO     | [data] control thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:11,339 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:11,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:47:19] 2025-06-03 23:33:11,491 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:11,537 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:11,548 | INFO     | [payload] control thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:11,724 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:11,776 | INFO     | [job] control thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:11,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:47:19] 2025-06-03 23:33:11,997 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:12,235 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:12,238 | INFO     | [job] validate thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:12,242 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:12,317 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:12,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:47:19] 2025-06-03 23:33:13,485 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:13,715 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:15,897 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:47:19] 2025-06-03 23:33:17,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140225320277824)>', '<ExcThread(monitor, started 140225019889408)>']
[2025-06-04 01:47:19] 2025-06-03 23:33:17,535 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:47:19] 2025-06-03 23:33:17,535 | INFO     | [monitor] control thread has ended
[2025-06-04 01:47:19] 2025-06-03 23:33:22,136 | INFO     | all workflow threads have been joined
[2025-06-04 01:47:19] 2025-06-03 23:33:22,136 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:47:19] 2025-06-03 23:33:22,136 | INFO     | traces error code: 0
[2025-06-04 01:47:19] 2025-06-03 23:33:22,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:47:19] 2025-06-03 23:33:22,403 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:47:19] 2025-06-03 23:33:22,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:47:19] 2025-06-03 23:33:22,528 [wrapper] pilotpid: 8548
[2025-06-04 01:47:19] 2025-06-03 23:33:22,551 [wrapper] Pilot exit status: 0
[2025-06-04 01:47:19] 2025-06-03 23:33:22,664 [wrapper] pandaids: 6677549178
[2025-06-04 01:47:19] 2025-06-03 23:33:22,849 [wrapper] cleanup supervisor_pilot 14922 8549
[2025-06-04 01:47:19] 2025-06-03 23:33:22,904 [wrapper] Test setup, not cleaning
[2025-06-04 01:47:19] 2025-06-03 23:33:22,976 [wrapper] apfmon messages muted
[2025-06-04 01:47:19] 2025-06-03 23:33:23,107 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:47:19] 2025-06-03 23:33:23,204 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:47:19]  *** Error codes and diagnostics ***
[2025-06-04 01:47:19]     "exeErrorCode": 0,
[2025-06-04 01:47:19]     "exeErrorDiag": "",
[2025-06-04 01:47:19]     "pilotErrorCode": 0,
[2025-06-04 01:47:19]     "pilotErrorDiag": "",
[2025-06-04 01:47:19]  *** Listing of results directory ***
[2025-06-04 01:47:19] total 387064
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:07 queuedata.json
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc    495897 Jun  3 11:07 pilot3.tar.gz
[2025-06-04 01:47:19] -rwx------. 1 boinc boinc     37140 Jun  3 11:07 runpilot2-wrapper.sh
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:47:19] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:40 run_atlas
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:40 job.xml
[2025-06-04 01:47:19] -rw-r--r--. 2 boinc boinc 214045830 Jun  3 21:40 EVNT.45006593._001068.pool.root.1
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc      6393 Jun  3 21:40 init_data.xml
[2025-06-04 01:47:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:40 start_atlas.sh
[2025-06-04 01:47:19] drwxrwx--x. 2 boinc boinc        68 Jun  3 21:40 shared
[2025-06-04 01:47:19] -rw-r--r--. 2 boinc boinc    508874 Jun  3 21:40 input.tar.gz
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:40 boinc_lockfile
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc      2525 Jun  3 21:41 pandaJob.out
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc    986893 Jun  3 21:43 agis_schedconf.cvmfs.json
[2025-06-04 01:47:19] drwx------. 4 boinc boinc      4096 Jun  3 21:43 pilot3
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc 175387638 Jun  4 01:31 HITS.45006595._026700.pool.root.1
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc        95 Jun  4 01:32 pilot_heartbeat.json
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc       531 Jun  4 01:32 boinc_task_state.xml
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc      1019 Jun  4 01:32 memory_monitor_summary.json
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc   1603667 Jun  4 01:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc    375684 Jun  4 01:32 log.45006595._026700.job.log.tgz.1
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc      7690 Jun  4 01:33 heartbeat.json
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc      4417 Jun  4 01:33 pilotlog.txt
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc   1168488 Jun  4 01:33 log.45006595._026700.job.log.1
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc       357 Jun  4 01:33 output.list
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc       620 Jun  4 01:33 runtime_log
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc   1566720 Jun  4 01:33 result.tar.gz
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc      8673 Jun  4 01:33 runtime_log.err
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc       657 Jun  4 01:33 jOWKDmmncg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm47iKDmydAxLo.diag
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc      8192 Jun  4 01:47 boinc_mmap_file
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc        28 Jun  4 01:47 wrapper_checkpoint.txt
[2025-06-04 01:47:19] -rw-r--r--. 1 boinc boinc     20542 Jun  4 01:47 stderr.txt
[2025-06-04 01:47:19] HITS file was successfully produced:
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc 175387638 Jun  4 01:31 shared/HITS.pool.root.1
[2025-06-04 01:47:19]  *** Contents of shared directory: ***
[2025-06-04 01:47:19] total 382360
[2025-06-04 01:47:19] -rw-r--r--. 2 boinc boinc 214045830 Jun  3 21:40 ATLAS.root_0
[2025-06-04 01:47:19] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:40 start_atlas.sh
[2025-06-04 01:47:19] -rw-r--r--. 2 boinc boinc    508874 Jun  3 21:40 input.tar.gz
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc 175387638 Jun  4 01:31 HITS.pool.root.1
[2025-06-04 01:47:19] -rw-------. 1 boinc boinc   1566720 Jun  4 01:33 result.tar.gz
01:47:21 (4655): run_atlas exited; CPU time 49125.218308
01:47:21 (4655): called boinc_finish(0)

</stderr_txt>
]]>

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