Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:22:41 (4416): wrapper (7.7.26015): starting
00:22:41 (4416): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:22:41] Arguments: --nthreads 8
[2025-06-04 00:22:41] Threads: 8
[2025-06-04 00:22:41] Checking for CVMFS
[2025-06-04 00:22:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:22:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:22:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:22:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:22:44] 2.11.2.0 8450 32375 95728 146757 1 69 14334307 25165825 4287 130560 0 17032999 99.778 19480180 1983 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 00:22:44] CVMFS is ok
[2025-06-04 00:22:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:22:44] Checking for apptainer binary...
[2025-06-04 00:22:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:22:44] Running /usr/bin/apptainer --version
[2025-06-04 00:22:44] apptainer version 1.3.2-1.el7
[2025-06-04 00:22:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:33:30] cg-vwn262.simple-grid.lan
[2025-06-04 00:33:30] apptainer works
[2025-06-04 00:33:30] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:33:30] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:33:30] Starting ATLAS job with PandaID=6677550143
[2025-06-04 00:33:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:37:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:37:41] 2025-06-04 02:37:25,737 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677550143/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:37:41] 2025-06-04 02:37:25,738 | INFO     | extracted standard info from prmon json
[2025-06-04 04:37:41] 2025-06-04 02:37:25,738 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:37:41] 2025-06-04 02:37:25,738 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:37:41] 2025-06-04 02:37:25,739 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:37:41] 2025-06-04 02:37:25,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:37:41] 2025-06-04 02:37:25,744 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:37:41] 2025-06-04 02:37:25,745 | INFO     | sum of square deviations: 3723716330.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,747 | INFO     | sum of deviations: 63772423221.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,747 | INFO     | mean x: 1748997656.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,747 | INFO     | mean y: 2439984.292576419
[2025-06-04 04:37:41] 2025-06-04 02:37:25,747 | INFO     | -- intersect: -29950920810.7734
[2025-06-04 04:37:41] 2025-06-04 02:37:25,747 | INFO     | intersect: -29950920810.7734
[2025-06-04 04:37:41] 2025-06-04 02:37:25,748 | INFO     | chi2: 6.447573166518914
[2025-06-04 04:37:41] 2025-06-04 02:37:25,748 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,750 | INFO     | sum of deviations: 77202699281.00002
[2025-06-04 04:37:41] 2025-06-04 02:37:25,751 | INFO     | mean x: 1748997503.5
[2025-06-04 04:37:41] 2025-06-04 02:37:25,751 | INFO     | mean y: 2448396.1785714286
[2025-06-04 04:37:41] 2025-06-04 02:37:25,751 | INFO     | -- intersect: -38741854490.67781
[2025-06-04 04:37:41] 2025-06-04 02:37:25,751 | INFO     | intersect: -38741854490.67781
[2025-06-04 04:37:41] 2025-06-04 02:37:25,751 | INFO     | chi2: 5.7382284412054165
[2025-06-04 04:37:41] 2025-06-04 02:37:25,752 | INFO     | current chi2=5.7382284412054165 (change=11.001732078001025 %)
[2025-06-04 04:37:41] 2025-06-04 02:37:25,752 | INFO     | right removable region: 223
[2025-06-04 04:37:41] 2025-06-04 02:37:25,752 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,754 | INFO     | sum of deviations: -14074643002.499994
[2025-06-04 04:37:41] 2025-06-04 02:37:25,754 | INFO     | mean x: 1748997808.5
[2025-06-04 04:37:41] 2025-06-04 02:37:25,754 | INFO     | mean y: 2489681.5223214286
[2025-06-04 04:37:41] 2025-06-04 02:37:25,754 | INFO     | -- intersect: 7065873885.525729
[2025-06-04 04:37:41] 2025-06-04 02:37:25,754 | INFO     | intersect: 7065873885.525729
[2025-06-04 04:37:41] 2025-06-04 02:37:25,755 | INFO     | chi2: 1.806548462927952
[2025-06-04 04:37:41] 2025-06-04 02:37:25,755 | INFO     | current chi2=1.806548462927952 (change=71.98095444175752 %)
[2025-06-04 04:37:41] 2025-06-04 02:37:25,755 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,757 | INFO     | sum of deviations: -42401639118.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,758 | INFO     | mean x: 1748997961.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,758 | INFO     | mean y: 2508463.0684931506
[2025-06-04 04:37:41] 2025-06-04 02:37:25,758 | INFO     | -- intersect: 22772886209.459057
[2025-06-04 04:37:41] 2025-06-04 02:37:25,758 | INFO     | intersect: 22772886209.459057
[2025-06-04 04:37:41] 2025-06-04 02:37:25,758 | INFO     | chi2: 0.9571443353817013
[2025-06-04 04:37:41] 2025-06-04 02:37:25,758 | INFO     | current chi2=0.9571443353817013 (change=47.01806483339973 %)
[2025-06-04 04:37:41] 2025-06-04 02:37:25,759 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 04:37:41] 2025-06-04 02:37:25,761 | INFO     | sum of deviations: -40548862327.99999
[2025-06-04 04:37:41] 2025-06-04 02:37:25,761 | INFO     | mean x: 1748998113.5
[2025-06-04 04:37:41] 2025-06-04 02:37:25,761 | INFO     | mean y: 2507129.61682243
[2025-06-04 04:37:41] 2025-06-04 02:37:25,761 | INFO     | -- intersect: 23340191081.62282
[2025-06-04 04:37:41] 2025-06-04 02:37:25,762 | INFO     | intersect: 23340191081.62282
[2025-06-04 04:37:41] 2025-06-04 02:37:25,762 | INFO     | chi2: 0.9445400594788159
[2025-06-04 04:37:41] 2025-06-04 02:37:25,762 | INFO     | current chi2=0.9445400594788159 (change=1.3168626127697756 %)
[2025-06-04 04:37:41] 2025-06-04 02:37:25,762 | INFO     | left removable region: 30
[2025-06-04 04:37:41] 2025-06-04 02:37:25,763 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,764 | INFO     | sum of deviations: -3568793349.000001
[2025-06-04 04:37:41] 2025-06-04 02:37:25,764 | INFO     | mean x: 1748998388.0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,765 | INFO     | mean y: 2499685.797927461
[2025-06-04 04:37:41] 2025-06-04 02:37:25,765 | INFO     | -- intersect: 2802590510.1868596
[2025-06-04 04:37:41] 2025-06-04 02:37:25,765 | INFO     | intersect: 2802590510.1868596
[2025-06-04 04:37:41] 2025-06-04 02:37:25,765 | INFO     | chi2: 0.06033427301776581
[2025-06-04 04:37:41] 2025-06-04 02:37:25,765 | INFO     | -- intersect: 2802590510.1868596
[2025-06-04 04:37:41] 2025-06-04 02:37:25,765 | INFO     | current memory leak: -1.60 B/s (using 193 data points, chi2=0.06)
[2025-06-04 04:37:41] 2025-06-04 02:37:25,766 | INFO     | ..............................
[2025-06-04 04:37:41] 2025-06-04 02:37:25,766 | INFO     | . Timing measurements:
[2025-06-04 04:37:41] 2025-06-04 02:37:25,767 | INFO     | . get job = 0 s
[2025-06-04 04:37:41] 2025-06-04 02:37:25,767 | INFO     | . initial setup = 8 s
[2025-06-04 04:37:41] 2025-06-04 02:37:25,767 | INFO     | . payload setup = 178 s
[2025-06-04 04:37:41] 2025-06-04 02:37:25,767 | INFO     | . stage-in = 0 s
[2025-06-04 04:37:41] 2025-06-04 02:37:25,767 | INFO     | . payload execution = 14066 s
[2025-06-04 04:37:41] 2025-06-04 02:37:25,767 | INFO     | . stage-out = 1 s
[2025-06-04 04:37:41] 2025-06-04 02:37:25,767 | INFO     | . log creation = 0 s
[2025-06-04 04:37:41] 2025-06-04 02:37:25,767 | INFO     | ..............................
[2025-06-04 04:37:41] 2025-06-04 02:37:25,897 | INFO     | 
[2025-06-04 04:37:41] 2025-06-04 02:37:25,897 | INFO     | job summary report
[2025-06-04 04:37:41] 2025-06-04 02:37:25,897 | INFO     | --------------------------------------------------
[2025-06-04 04:37:41] 2025-06-04 02:37:25,897 | INFO     | PanDA job id: 6677550143
[2025-06-04 04:37:41] 2025-06-04 02:37:25,897 | INFO     | task id: 45006595
[2025-06-04 04:37:41] 2025-06-04 02:37:25,897 | INFO     | errors: (none)
[2025-06-04 04:37:41] 2025-06-04 02:37:25,897 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:37:41] 2025-06-04 02:37:25,897 | INFO     | pilot state: finished 
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | transexitcode: 0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | exeerrorcode: 0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | exeerrordiag: 
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | exitcode: 0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | exitmsg: OK
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | cpuconsumptiontime: 50371 s
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | nevents: 400
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | neventsw: 0
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | pid: 26818
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | pgrp: 26818
[2025-06-04 04:37:41] 2025-06-04 02:37:25,898 | INFO     | corecount: 8
[2025-06-04 04:37:41] 2025-06-04 02:37:25,899 | INFO     | event service: False
[2025-06-04 04:37:41] 2025-06-04 02:37:25,899 | INFO     | sizes: {0: 2404356, 1: 2405213, 2: 2405241, 12: 2405241, 23: 2405269, 34: 2405297, 45: 2405453, 55: 2405481, 66: 2405509, 77: 2405537, 88: 2405593, 92: 2406107, 98
[2025-06-04 04:37:41] 2025-06-04 02:37:25,899 | INFO     | --------------------------------------------------
[2025-06-04 04:37:41] 2025-06-04 02:37:25,899 | INFO     | 
[2025-06-04 04:37:41] 2025-06-04 02:37:25,899 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 04:37:41] 2025-06-04 02:37:25,965 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,965 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,966 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:37:41] 2025-06-04 02:37:25,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:37:41] 2025-06-04 02:37:25,967 | INFO     | job 6677550143 has completed (purged errors)
[2025-06-04 04:37:41] 2025-06-04 02:37:25,967 | INFO     | overall cleanup function is called
[2025-06-04 04:37:41] 2025-06-04 02:37:26,977 | INFO     | --- collectZombieJob: --- 10, [26818]
[2025-06-04 04:37:41] 2025-06-04 02:37:26,977 | INFO     | zombie collector waiting for pid 26818
[2025-06-04 04:37:41] 2025-06-04 02:37:26,977 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:37:41] 2025-06-04 02:37:26,977 | INFO     | collected zombie processes
[2025-06-04 04:37:41] 2025-06-04 02:37:26,977 | INFO     | will attempt to kill all subprocesses of pid=26818
[2025-06-04 04:37:41] 2025-06-04 02:37:27,095 | INFO     | process IDs to be killed: [26818] (in reverse order)
[2025-06-04 04:37:41] 2025-06-04 02:37:27,158 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:37:41] 2025-06-04 02:37:27,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:37:41] 2025-06-04 02:37:27,162 | INFO     | did not find any defunct processes belonging to 26818
[2025-06-04 04:37:41] 2025-06-04 02:37:27,166 | INFO     | did not find any defunct processes belonging to 26818
[2025-06-04 04:37:41] 2025-06-04 02:37:27,166 | INFO     | ready for new job
[2025-06-04 04:37:41] 2025-06-04 02:37:27,166 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:37:41] 2025-06-04 02:37:27,169 | INFO     | **************************************
[2025-06-04 04:37:41] 2025-06-04 02:37:27,169 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:37:41] 2025-06-04 02:37:27,169 | INFO     | **************************************
[2025-06-04 04:37:41] 2025-06-04 02:37:27,169 | INFO     | 
[2025-06-04 04:37:41] 2025-06-04 02:37:27,170 | INFO     | pilot is running in a VM
[2025-06-04 04:37:41] 2025-06-04 02:37:27,170 | INFO     | architecture information:
[2025-06-04 04:37:41] 2025-06-04 02:37:27,171 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:37:41] 2025-06-04 02:37:27,191 | INFO     | cat /etc/os-release:
[2025-06-04 04:37:41] NAME="CentOS Linux"
[2025-06-04 04:37:41] VERSION="7 (Core)"
[2025-06-04 04:37:41] ID="centos"
[2025-06-04 04:37:41] ID_LIKE="rhel fedora"
[2025-06-04 04:37:41] VERSION_ID="7"
[2025-06-04 04:37:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:37:41] ANSI_COLOR="0;31"
[2025-06-04 04:37:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:37:41] HOME_URL="https://www.centos.org/"
[2025-06-04 04:37:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:37:41] 
[2025-06-04 04:37:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:37:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:37:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:37:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:37:41] 
[2025-06-04 04:37:41] 2025-06-04 02:37:27,191 | INFO     | **************************************
[2025-06-04 04:37:41] 2025-06-04 02:37:27,694 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 04:37:41] 2025-06-04 02:37:27,718 | INFO     | sufficient remaining disk space (496772317184 B)
[2025-06-04 04:37:41] 2025-06-04 02:37:27,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:37:41] 2025-06-04 02:37:27,718 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:37:41] 2025-06-04 02:37:27,718 | INFO     | update_server=False
[2025-06-04 04:37:41] 2025-06-04 02:37:27,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:37:41] 2025-06-04 02:37:27,719 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:37:41] 2025-06-04 02:37:27,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:37:41] 2025-06-04 02:37:27,720 | INFO     | aborting loop
[2025-06-04 04:37:41] 2025-06-04 02:37:27,933 | INFO     | all payload control threads have been joined
[2025-06-04 04:37:41] 2025-06-04 02:37:28,004 | INFO     | all job control threads have been joined
[2025-06-04 04:37:41] 2025-06-04 02:37:28,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:37:41] 2025-06-04 02:37:28,340 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:37:41] 2025-06-04 02:37:28,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:37:41] 2025-06-04 02:37:28,341 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:37:41] 2025-06-04 02:37:28,490 | INFO     | all data control threads have been joined
[2025-06-04 04:37:41] 2025-06-04 02:37:28,724 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:28,725 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:28,726 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:28,854 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:28,938 | INFO     | [payload] control thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:29,008 | INFO     | [job] control thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:29,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:29,403 | INFO     | [job] validate thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:29,495 | INFO     | [data] control thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:29,686 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:29,725 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:29,729 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:29,892 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:30,013 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:30,061 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:30,367 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:37:41] 2025-06-04 02:37:34,373 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:37:41] 2025-06-04 02:37:36,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503342987072)>', '<ExcThread(monitor, started 140502917695232)>']
[2025-06-04 04:37:41] 2025-06-04 02:37:36,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:37:41] 2025-06-04 02:37:36,374 | INFO     | [monitor] control thread has ended
[2025-06-04 04:37:41] 2025-06-04 02:37:41,258 | INFO     | all workflow threads have been joined
[2025-06-04 04:37:41] 2025-06-04 02:37:41,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:37:41] 2025-06-04 02:37:41,258 | INFO     | traces error code: 0
[2025-06-04 04:37:41] 2025-06-04 02:37:41,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:37:41] 2025-06-04 02:37:41,510 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:37:41] 2025-06-04 02:37:41,527 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:37:41] 2025-06-04 02:37:41,533 [wrapper] pilotpid: 16188
[2025-06-04 04:37:41] 2025-06-04 02:37:41,537 [wrapper] Pilot exit status: 0
[2025-06-04 04:37:41] 2025-06-04 02:37:41,573 [wrapper] pandaids: 6677550143
[2025-06-04 04:37:41] 2025-06-04 02:37:41,620 [wrapper] cleanup supervisor_pilot  1059 16189
[2025-06-04 04:37:41] 2025-06-04 02:37:41,637 [wrapper] Test setup, not cleaning
[2025-06-04 04:37:41] 2025-06-04 02:37:41,652 [wrapper] apfmon messages muted
[2025-06-04 04:37:41] 2025-06-04 02:37:41,660 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:37:41] 2025-06-04 02:37:41,668 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:37:41]  *** Error codes and diagnostics ***
[2025-06-04 04:37:41]     "exeErrorCode": 0,
[2025-06-04 04:37:41]     "exeErrorDiag": "",
[2025-06-04 04:37:41]     "pilotErrorCode": 0,
[2025-06-04 04:37:41]     "pilotErrorDiag": "",
[2025-06-04 04:37:41]  *** Listing of results directory ***
[2025-06-04 04:37:41] total 393676
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:07 queuedata.json
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc    495897 Jun  3 11:07 pilot3.tar.gz
[2025-06-04 04:37:41] -rwx------. 1 boinc boinc     37140 Jun  3 11:09 runpilot2-wrapper.sh
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc       100 Jun  4 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:37:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 00:22 run_atlas
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc       105 Jun  4 00:22 job.xml
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc      6392 Jun  4 00:22 init_data.xml
[2025-06-04 04:37:41] -rw-r--r--. 2 boinc boinc 214459431 Jun  4 00:22 EVNT.45006593._001071.pool.root.1
[2025-06-04 04:37:41] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:22 start_atlas.sh
[2025-06-04 04:37:41] drwxrwx--x. 2 boinc boinc        68 Jun  4 00:22 shared
[2025-06-04 04:37:41] -rw-r--r--. 2 boinc boinc    508885 Jun  4 00:22 input.tar.gz
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc         0 Jun  4 00:22 boinc_lockfile
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc      2525 Jun  4 00:33 pandaJob.out
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc    986861 Jun  4 00:36 agis_schedconf.cvmfs.json
[2025-06-04 04:37:41] drwx------. 4 boinc boinc      4096 Jun  4 00:36 pilot3
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc 181581297 Jun  4 04:36 HITS.45006595._026791.pool.root.1
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc       531 Jun  4 04:36 boinc_task_state.xml
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc        95 Jun  4 04:37 pilot_heartbeat.json
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc      1044 Jun  4 04:37 memory_monitor_summary.json
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc   1603667 Jun  4 04:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc    400070 Jun  4 04:37 log.45006595._026791.job.log.tgz.1
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc      8192 Jun  4 04:37 boinc_mmap_file
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc        28 Jun  4 04:37 wrapper_checkpoint.txt
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc      7690 Jun  4 04:37 heartbeat.json
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc      4417 Jun  4 04:37 pilotlog.txt
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc   1231259 Jun  4 04:37 log.45006595._026791.job.log.1
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc       357 Jun  4 04:37 output.list
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:37 runtime_log
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc   1648640 Jun  4 04:37 result.tar.gz
[2025-06-04 04:37:41] -rw-------. 1 boinc boinc       657 Jun  4 04:37 RZCODmipcg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmt8iKDm1jlCGn.diag
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc      8673 Jun  4 04:37 runtime_log.err
[2025-06-04 04:37:41] -rw-r--r--. 1 boinc boinc     20527 Jun  4 04:37 stderr.txt
[2025-06-04 04:37:41] HITS file was successfully produced:
[2025-06-04 04:37:42] -rw-------. 1 boinc boinc 181581297 Jun  4 04:36 shared/HITS.pool.root.1
[2025-06-04 04:37:42]  *** Contents of shared directory: ***
[2025-06-04 04:37:42] total 388892
[2025-06-04 04:37:42] -rw-r--r--. 2 boinc boinc 214459431 Jun  4 00:22 ATLAS.root_0
[2025-06-04 04:37:42] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:22 start_atlas.sh
[2025-06-04 04:37:42] -rw-r--r--. 2 boinc boinc    508885 Jun  4 00:22 input.tar.gz
[2025-06-04 04:37:42] -rw-------. 1 boinc boinc 181581297 Jun  4 04:36 HITS.pool.root.1
[2025-06-04 04:37:42] -rw-------. 1 boinc boinc   1648640 Jun  4 04:37 result.tar.gz
04:37:43 (4416): run_atlas exited; CPU time 50572.341324
04:37:43 (4416): called boinc_finish(0)

</stderr_txt>
]]>

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