Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:42:32 (32042): wrapper (7.7.26015): starting
07:42:32 (32042): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:42:32] Arguments: --nthreads 8
[2025-06-03 07:42:32] Threads: 8
[2025-06-03 07:42:32] Checking for CVMFS
[2025-06-03 07:42:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:42:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:42:32] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:42:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:42:33] 2.11.2.0 2923 17159 77916 146741 2 56 15982008 20275201 1 130560 0 7411634 99.982 3283364 4249 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 07:42:33] CVMFS is ok
[2025-06-03 07:42:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 07:42:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 07:42:33] Further information can be found at the LHC@home message board.
[2025-06-03 07:42:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:42:33] Checking for apptainer binary...
[2025-06-03 07:42:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:42:33] Running /usr/bin/apptainer --version
[2025-06-03 07:42:33] apptainer version 1.3.2-1.el7
[2025-06-03 07:42:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:42:35] c-204-28.aglt2.org
[2025-06-03 07:42:35] apptainer works
[2025-06-03 07:42:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:42:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:42:35] Starting ATLAS job with PandaID=6677549173
[2025-06-03 07:42:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:35:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:35:36] 2025-06-03 13:35:16,464 | INFO     | monitor loop #499: job 0:6677549173 is in state 'finished'
[2025-06-03 09:35:36] 2025-06-03 13:35:16,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 09:35:36] 2025-06-03 13:35:18,968 | INFO     | monitor loop #500: job 0:6677549173 is in state 'finished'
[2025-06-03 09:35:36] 2025-06-03 13:35:18,969 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,472 | INFO     | monitor loop #501: job 0:6677549173 is in state 'finished'
[2025-06-03 09:35:36] 2025-06-03 13:35:21,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,740 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 09:35:36] 2025-06-03 13:35:21,741 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677549173/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,742 | INFO     | extracted standard info from prmon json
[2025-06-03 09:35:36] 2025-06-03 13:35:21,742 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:35:36] 2025-06-03 13:35:21,742 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:35:36] 2025-06-03 13:35:21,743 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:35:36] 2025-06-03 13:35:21,743 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:35:36] 2025-06-03 13:35:21,745 | INFO     | fitting pss+swap vs Time
[2025-06-03 09:35:36] 2025-06-03 13:35:21,745 | INFO     | sum of square deviations: 412686807.5
[2025-06-03 09:35:36] 2025-06-03 13:35:21,746 | INFO     | sum of deviations: 971436437.4999985
[2025-06-03 09:35:36] 2025-06-03 13:35:21,746 | INFO     | mean x: 1748954328.5
[2025-06-03 09:35:36] 2025-06-03 13:35:21,746 | INFO     | mean y: 2529763.0636363635
[2025-06-03 09:35:36] 2025-06-03 13:35:21,747 | INFO     | -- intersect: -4114388760.50279
[2025-06-03 09:35:36] 2025-06-03 13:35:21,747 | INFO     | intersect: -4114388760.50279
[2025-06-03 09:35:36] 2025-06-03 13:35:21,747 | INFO     | chi2: 1.6565616008378656
[2025-06-03 09:35:36] 2025-06-03 13:35:21,747 | INFO     | sum of square deviations: 358927660.0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,748 | INFO     | sum of deviations: 1253055656.0000002
[2025-06-03 09:35:36] 2025-06-03 13:35:21,748 | INFO     | mean x: 1748954176.0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,748 | INFO     | mean y: 2530562.504761905
[2025-06-03 09:35:36] 2025-06-03 13:35:21,748 | INFO     | -- intersect: -6103259451.899868
[2025-06-03 09:35:36] 2025-06-03 13:35:21,748 | INFO     | intersect: -6103259451.899868
[2025-06-03 09:35:36] 2025-06-03 13:35:21,748 | INFO     | chi2: 1.6588376320484248
[2025-06-03 09:35:36] 2025-06-03 13:35:21,749 | INFO     | current chi2=1.6588376320484248 (change=-0.13739490335934434 %)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,749 | INFO     | right removable region: 104
[2025-06-03 09:35:36] 2025-06-03 13:35:21,749 | INFO     | sum of square deviations: 358927660.0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,749 | INFO     | sum of deviations: -15925149830.0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,750 | INFO     | mean x: 1748954481.0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,750 | INFO     | mean y: 2576700.5904761907
[2025-06-03 09:35:36] 2025-06-03 13:35:21,750 | INFO     | -- intersect: 77601394679.05133
[2025-06-03 09:35:36] 2025-06-03 13:35:21,750 | INFO     | intersect: 77601394679.05133
[2025-06-03 09:35:36] 2025-06-03 13:35:21,750 | INFO     | chi2: 0.1137288648631526
[2025-06-03 09:35:36] 2025-06-03 13:35:21,750 | INFO     | current chi2=0.1137288648631526 (change=93.13464317864 %)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,751 | INFO     | sum of square deviations: 310052325.0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,751 | INFO     | sum of deviations: -14687190210.0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,751 | INFO     | mean x: 1748954633.5
[2025-06-03 09:35:36] 2025-06-03 13:35:21,751 | INFO     | mean y: 2572698.16
[2025-06-03 09:35:36] 2025-06-03 13:35:21,751 | INFO     | -- intersect: 82850618978.33333
[2025-06-03 09:35:36] 2025-06-03 13:35:21,752 | INFO     | intersect: 82850618978.33333
[2025-06-03 09:35:36] 2025-06-03 13:35:21,752 | INFO     | chi2: 0.1004176701896784
[2025-06-03 09:35:36] 2025-06-03 13:35:21,752 | INFO     | current chi2=0.1004176701896784 (change=11.704323866672956 %)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,752 | INFO     | left removable region: 20
[2025-06-03 09:35:36] 2025-06-03 13:35:21,752 | INFO     | sum of square deviations: 183761585.0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,753 | INFO     | sum of deviations: -8150218906.0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,753 | INFO     | mean x: 1748954755.5
[2025-06-03 09:35:36] 2025-06-03 13:35:21,753 | INFO     | mean y: 2553809.0476190476
[2025-06-03 09:35:36] 2025-06-03 13:35:21,753 | INFO     | -- intersect: 77572433901.31342
[2025-06-03 09:35:36] 2025-06-03 13:35:21,753 | INFO     | intersect: 77572433901.31342
[2025-06-03 09:35:36] 2025-06-03 13:35:21,753 | INFO     | chi2: 0.08662064601015226
[2025-06-03 09:35:36] 2025-06-03 13:35:21,753 | INFO     | -- intersect: 77572433901.31342
[2025-06-03 09:35:36] 2025-06-03 13:35:21,754 | INFO     | current memory leak: -44.35 B/s (using 84 data points, chi2=0.09)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,754 | INFO     | ..............................
[2025-06-03 09:35:36] 2025-06-03 13:35:21,754 | INFO     | . Timing measurements:
[2025-06-03 09:35:36] 2025-06-03 13:35:21,754 | INFO     | . get job = 0 s
[2025-06-03 09:35:36] 2025-06-03 13:35:21,754 | INFO     | . initial setup = 2 s
[2025-06-03 09:35:36] 2025-06-03 13:35:21,755 | INFO     | . payload setup = 11 s
[2025-06-03 09:35:36] 2025-06-03 13:35:21,755 | INFO     | . stage-in = 0 s
[2025-06-03 09:35:36] 2025-06-03 13:35:21,755 | INFO     | . payload execution = 6709 s
[2025-06-03 09:35:36] 2025-06-03 13:35:21,755 | INFO     | . stage-out = 0 s
[2025-06-03 09:35:36] 2025-06-03 13:35:21,755 | INFO     | . log creation = 0 s
[2025-06-03 09:35:36] 2025-06-03 13:35:21,755 | INFO     | ..............................
[2025-06-03 09:35:36] 2025-06-03 13:35:21,850 | INFO     | 
[2025-06-03 09:35:36] 2025-06-03 13:35:21,851 | INFO     | job summary report
[2025-06-03 09:35:36] 2025-06-03 13:35:21,851 | INFO     | --------------------------------------------------
[2025-06-03 09:35:36] 2025-06-03 13:35:21,851 | INFO     | PanDA job id: 6677549173
[2025-06-03 09:35:36] 2025-06-03 13:35:21,851 | INFO     | task id: 45006595
[2025-06-03 09:35:36] 2025-06-03 13:35:21,851 | INFO     | errors: (none)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,851 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:35:36] 2025-06-03 13:35:21,852 | INFO     | pilot state: finished 
[2025-06-03 09:35:36] 2025-06-03 13:35:21,852 | INFO     | transexitcode: 0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,852 | INFO     | exeerrorcode: 0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,852 | INFO     | exeerrordiag: 
[2025-06-03 09:35:36] 2025-06-03 13:35:21,852 | INFO     | exitcode: 0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,853 | INFO     | exitmsg: OK
[2025-06-03 09:35:36] 2025-06-03 13:35:21,853 | INFO     | cpuconsumptiontime: 49195 s
[2025-06-03 09:35:36] 2025-06-03 13:35:21,853 | INFO     | nevents: 400
[2025-06-03 09:35:36] 2025-06-03 13:35:21,853 | INFO     | neventsw: 0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,853 | INFO     | pid: 9828
[2025-06-03 09:35:36] 2025-06-03 13:35:21,853 | INFO     | pgrp: 9828
[2025-06-03 09:35:36] 2025-06-03 13:35:21,854 | INFO     | corecount: 8
[2025-06-03 09:35:36] 2025-06-03 13:35:21,854 | INFO     | event service: False
[2025-06-03 09:35:36] 2025-06-03 13:35:21,854 | INFO     | sizes: {0: 2404955, 1: 2405210, 7: 2405416, 12: 2405444, 6725: 2432395, 6726: 2441336, 6729: 2441520, 6735: 2441690}
[2025-06-03 09:35:36] 2025-06-03 13:35:21,854 | INFO     | --------------------------------------------------
[2025-06-03 09:35:36] 2025-06-03 13:35:21,854 | INFO     | 
[2025-06-03 09:35:36] 2025-06-03 13:35:21,854 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 09:35:36] 2025-06-03 13:35:21,884 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,884 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,884 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,885 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,887 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:35:36] 2025-06-03 13:35:21,888 | INFO     | job 6677549173 has completed (purged errors)
[2025-06-03 09:35:36] 2025-06-03 13:35:21,888 | INFO     | overall cleanup function is called
[2025-06-03 09:35:36] 2025-06-03 13:35:22,894 | INFO     | --- collectZombieJob: --- 10, [9828]
[2025-06-03 09:35:36] 2025-06-03 13:35:22,894 | INFO     | zombie collector waiting for pid 9828
[2025-06-03 09:35:36] 2025-06-03 13:35:22,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:35:36] 2025-06-03 13:35:22,894 | INFO     | collected zombie processes
[2025-06-03 09:35:36] 2025-06-03 13:35:22,895 | INFO     | will attempt to kill all subprocesses of pid=9828
[2025-06-03 09:35:36] 2025-06-03 13:35:22,983 | INFO     | process IDs to be killed: [9828] (in reverse order)
[2025-06-03 09:35:36] 2025-06-03 13:35:23,040 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:35:36] 2025-06-03 13:35:23,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:35:36] 2025-06-03 13:35:23,044 | INFO     | did not find any defunct processes belonging to 9828
[2025-06-03 09:35:36] 2025-06-03 13:35:23,048 | INFO     | did not find any defunct processes belonging to 9828
[2025-06-03 09:35:36] 2025-06-03 13:35:23,048 | INFO     | ready for new job
[2025-06-03 09:35:36] 2025-06-03 13:35:23,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:35:36] 2025-06-03 13:35:23,050 | INFO     | **************************************
[2025-06-03 09:35:36] 2025-06-03 13:35:23,050 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:35:36] 2025-06-03 13:35:23,050 | INFO     | **************************************
[2025-06-03 09:35:36] 2025-06-03 13:35:23,050 | INFO     | 
[2025-06-03 09:35:36] 2025-06-03 13:35:23,051 | INFO     | architecture information:
[2025-06-03 09:35:36] 2025-06-03 13:35:23,052 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:35:36] 2025-06-03 13:35:23,069 | INFO     | cat /etc/os-release:
[2025-06-03 09:35:36] NAME="CentOS Linux"
[2025-06-03 09:35:36] VERSION="7 (Core)"
[2025-06-03 09:35:36] ID="centos"
[2025-06-03 09:35:36] ID_LIKE="rhel fedora"
[2025-06-03 09:35:36] VERSION_ID="7"
[2025-06-03 09:35:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:35:36] ANSI_COLOR="0;31"
[2025-06-03 09:35:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:35:36] HOME_URL="https://www.centos.org/"
[2025-06-03 09:35:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:35:36] 
[2025-06-03 09:35:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:35:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:35:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:35:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:35:36] 
[2025-06-03 09:35:36] 2025-06-03 13:35:23,069 | INFO     | **************************************
[2025-06-03 09:35:36] 2025-06-03 13:35:23,573 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 09:35:36] 2025-06-03 13:35:23,593 | INFO     | sufficient remaining disk space (18612224000 B)
[2025-06-03 09:35:36] 2025-06-03 13:35:23,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:35:36] 2025-06-03 13:35:23,594 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:35:36] 2025-06-03 13:35:23,594 | INFO     | update_server=False
[2025-06-03 09:35:36] 2025-06-03 13:35:23,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:35:36] 2025-06-03 13:35:23,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:35:36] 2025-06-03 13:35:23,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:35:36] 2025-06-03 13:35:23,975 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 09:35:36] 2025-06-03 13:35:23,976 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 09:35:36] 2025-06-03 13:35:23,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:35:36] 2025-06-03 13:35:23,976 | INFO     | will abort loop
[2025-06-03 09:35:36] 2025-06-03 13:35:24,010 | INFO     | all data control threads have been joined
[2025-06-03 09:35:36] 2025-06-03 13:35:24,419 | INFO     | all job control threads have been joined
[2025-06-03 09:35:36] 2025-06-03 13:35:24,579 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:35:36] 2025-06-03 13:35:24,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:35:36] 2025-06-03 13:35:24,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:35:36] 2025-06-03 13:35:24,596 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:24,600 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:24,722 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:24,739 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:24,907 | INFO     | all payload control threads have been joined
[2025-06-03 09:35:36] 2025-06-03 13:35:24,979 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:25,010 | INFO     | [data] control thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:25,374 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:25,425 | INFO     | [job] control thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:25,603 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:25,650 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:25,879 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:25,912 | INFO     | [payload] control thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:25,994 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:26,004 | INFO     | [job] validate thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:26,006 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:26,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:35:36] 2025-06-03 13:35:30,201 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:35:36] 2025-06-03 13:35:30,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276906129216)>', '<ExcThread(monitor, started 140276148451072)>']
[2025-06-03 09:35:36] 2025-06-03 13:35:31,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:35:36] 2025-06-03 13:35:31,605 | INFO     | [monitor] control thread has ended
[2025-06-03 09:35:36] 2025-06-03 13:35:35,804 | INFO     | all workflow threads have been joined
[2025-06-03 09:35:36] 2025-06-03 13:35:35,804 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:35:36] 2025-06-03 13:35:35,805 | INFO     | traces error code: 0
[2025-06-03 09:35:36] 2025-06-03 13:35:35,805 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:35:36] 2025-06-03 13:35:35,911 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:35:36] 2025-06-03 13:35:35,916 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:35:36] 2025-06-03 13:35:35,920 [wrapper] pilotpid: 3359
[2025-06-03 09:35:36] 2025-06-03 13:35:35,925 [wrapper] Pilot exit status: 0
[2025-06-03 09:35:36] 2025-06-03 13:35:35,942 [wrapper] pandaids: 6677549173
[2025-06-03 09:35:36] 2025-06-03 13:35:35,988 [wrapper] cleanup supervisor_pilot 21440 3360
[2025-06-03 09:35:36] 2025-06-03 13:35:35,993 [wrapper] Test setup, not cleaning
[2025-06-03 09:35:36] 2025-06-03 13:35:35,997 [wrapper] apfmon messages muted
[2025-06-03 09:35:36] 2025-06-03 13:35:36,001 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:35:36] 2025-06-03 13:35:36,006 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:35:36]  *** Error codes and diagnostics ***
[2025-06-03 09:35:36]     "exeErrorCode": 0,
[2025-06-03 09:35:36]     "exeErrorDiag": "",
[2025-06-03 09:35:36]     "pilotErrorCode": 0,
[2025-06-03 09:35:36]     "pilotErrorDiag": "",
[2025-06-03 09:35:36]  *** Listing of results directory ***
[2025-06-03 09:35:36] total 390024
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 05:07 queuedata.json
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 05:07 pilot3.tar.gz
[2025-06-03 09:35:36] -rwx------ 1 boincer umatlas     37140 Jun  3 05:07 runpilot2-wrapper.sh
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas       100 Jun  3 07:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:35:36] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 07:42 run_atlas
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas       105 Jun  3 07:42 job.xml
[2025-06-03 09:35:36] -rw-r--r-- 2 boincer umatlas 214045830 Jun  3 07:42 EVNT.45006593._001068.pool.root.1
[2025-06-03 09:35:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 07:42 start_atlas.sh
[2025-06-03 09:35:36] drwxrwx--x 2 boincer umatlas      4096 Jun  3 07:42 shared
[2025-06-03 09:35:36] -rw-r--r-- 2 boincer umatlas    508872 Jun  3 07:42 input.tar.gz
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas         0 Jun  3 07:42 boinc_lockfile
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas      2524 Jun  3 07:42 pandaJob.out
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas    982666 Jun  3 07:42 agis_schedconf.cvmfs.json
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas   1603667 Jun  3 07:42 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:35:36] drwx------ 4 boincer umatlas      4096 Jun  3 07:42 pilot3
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas      5825 Jun  3 09:29 init_data.xml
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas 179644399 Jun  3 09:34 HITS.45006595._026695.pool.root.1
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas       529 Jun  3 09:34 boinc_task_state.xml
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas      1049 Jun  3 09:35 memory_monitor_summary.json
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas    309675 Jun  3 09:35 log.45006595._026695.job.log.tgz.1
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas      7749 Jun  3 09:35 heartbeat.json
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas        95 Jun  3 09:35 pilot_heartbeat.json
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 09:35 boinc_mmap_file
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas        27 Jun  3 09:35 wrapper_checkpoint.txt
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas      4539 Jun  3 09:35 pilotlog.txt
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas    619868 Jun  3 09:35 log.45006595._026695.job.log.1
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas       357 Jun  3 09:35 output.list
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas       620 Jun  3 09:35 runtime_log
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas    952320 Jun  3 09:35 result.tar.gz
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas      8659 Jun  3 09:35 runtime_log.err
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas       658 Jun  3 09:35 7RQKDmmncg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmz7iKDm4WfmDm.diag
[2025-06-03 09:35:36] -rw-r--r-- 1 boincer umatlas     21005 Jun  3 09:35 stderr.txt
[2025-06-03 09:35:36] HITS file was successfully produced:
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas 179644399 Jun  3 09:34 shared/HITS.pool.root.1
[2025-06-03 09:35:36]  *** Contents of shared directory: ***
[2025-06-03 09:35:36] total 385920
[2025-06-03 09:35:36] -rw-r--r-- 2 boincer umatlas 214045830 Jun  3 07:42 ATLAS.root_0
[2025-06-03 09:35:36] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 07:42 start_atlas.sh
[2025-06-03 09:35:36] -rw-r--r-- 2 boincer umatlas    508872 Jun  3 07:42 input.tar.gz
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas 179644399 Jun  3 09:34 HITS.pool.root.1
[2025-06-03 09:35:36] -rw------- 1 boincer umatlas    952320 Jun  3 09:35 result.tar.gz
09:35:37 (32042): run_atlas exited; CPU time 49138.016861
09:35:37 (32042): called boinc_finish(0)

</stderr_txt>
]]>

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