Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:34:24 (8203): wrapper (7.7.26015): starting
00:34:24 (8203): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:34:24] Arguments: --nthreads 8
[2025-06-04 00:34:24] Threads: 8
[2025-06-04 00:34:24] Checking for CVMFS
[2025-06-04 00:34:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:34:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:34:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:34:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:34:26] 2.11.2.0 27863 32555 94956 146760 0 114 20178562 25165825 4004 130560 0 15737106 99.758 19325021 4768 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 00:34:26] CVMFS is ok
[2025-06-04 00:34:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:34:26] Checking for apptainer binary...
[2025-06-04 00:34:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:34:26] Running /usr/bin/apptainer --version
[2025-06-04 00:34:26] apptainer version 1.3.2-1.el7
[2025-06-04 00:34:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:34:27] cg-vwn495.simple-grid.lan
[2025-06-04 00:34:27] apptainer works
[2025-06-04 00:34:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:34:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:34:27] Starting ATLAS job with PandaID=6677549073
[2025-06-04 00:34:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:23:17]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:23:17] 2025-06-04 02:07:01,081 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6677549073/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:23:17] 2025-06-04 02:07:01,082 | INFO     | extracted standard info from prmon json
[2025-06-04 04:23:17] 2025-06-04 02:07:01,082 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:23:17] 2025-06-04 02:07:01,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:23:17] 2025-06-04 02:07:01,083 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:23:17] 2025-06-04 02:07:01,083 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:23:17] 2025-06-04 02:07:01,087 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:23:17] 2025-06-04 02:07:01,088 | INFO     | sum of square deviations: 2710627567.5
[2025-06-04 04:23:17] 2025-06-04 02:07:01,089 | INFO     | sum of deviations: -28158904302.000008
[2025-06-04 04:23:17] 2025-06-04 02:07:01,089 | INFO     | mean x: 1748996420.5
[2025-06-04 04:23:17] 2025-06-04 02:07:01,089 | INFO     | mean y: 2510021.6893203883
[2025-06-04 04:23:17] 2025-06-04 02:07:01,090 | INFO     | -- intersect: 18171668861.471565
[2025-06-04 04:23:17] 2025-06-04 02:07:01,090 | INFO     | intersect: 18171668861.471565
[2025-06-04 04:23:17] 2025-06-04 02:07:01,090 | INFO     | chi2: 2.4741123527070314
[2025-06-04 04:23:17] 2025-06-04 02:07:01,090 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,092 | INFO     | sum of deviations: -13794417451.000004
[2025-06-04 04:23:17] 2025-06-04 02:07:01,092 | INFO     | mean x: 1748996268.0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,092 | INFO     | mean y: 2521181.8656716417
[2025-06-04 04:23:17] 2025-06-04 02:07:01,092 | INFO     | -- intersect: 9584085095.264536
[2025-06-04 04:23:17] 2025-06-04 02:07:01,092 | INFO     | intersect: 9584085095.264536
[2025-06-04 04:23:17] 2025-06-04 02:07:01,093 | INFO     | chi2: 1.7053830306469149
[2025-06-04 04:23:17] 2025-06-04 02:07:01,093 | INFO     | current chi2=1.7053830306469149 (change=31.070914027773117 %)
[2025-06-04 04:23:17] 2025-06-04 02:07:01,093 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,095 | INFO     | sum of deviations: -13294149801.999992
[2025-06-04 04:23:17] 2025-06-04 02:07:01,095 | INFO     | mean x: 1748996115.5
[2025-06-04 04:23:17] 2025-06-04 02:07:01,095 | INFO     | mean y: 2521598.1938775512
[2025-06-04 04:23:17] 2025-06-04 02:07:01,095 | INFO     | -- intersect: 9961483713.27657
[2025-06-04 04:23:17] 2025-06-04 02:07:01,095 | INFO     | intersect: 9961483713.27657
[2025-06-04 04:23:17] 2025-06-04 02:07:01,095 | INFO     | chi2: 1.704072985621782
[2025-06-04 04:23:17] 2025-06-04 02:07:01,096 | INFO     | current chi2=1.704072985621782 (change=0.07681822802211942 %)
[2025-06-04 04:23:17] 2025-06-04 02:07:01,096 | INFO     | right removable region: 195
[2025-06-04 04:23:17] 2025-06-04 02:07:01,096 | INFO     | sum of square deviations: 2518000700.0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,097 | INFO     | sum of deviations: -60161489120.00001
[2025-06-04 04:23:17] 2025-06-04 02:07:01,098 | INFO     | mean x: 1748996573.0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,098 | INFO     | mean y: 2535088.0199004975
[2025-06-04 04:23:17] 2025-06-04 02:07:01,098 | INFO     | -- intersect: 41790545034.74342
[2025-06-04 04:23:17] 2025-06-04 02:07:01,098 | INFO     | intersect: 41790545034.74342
[2025-06-04 04:23:17] 2025-06-04 02:07:01,098 | INFO     | chi2: 0.984812707382755
[2025-06-04 04:23:17] 2025-06-04 02:07:01,098 | INFO     | current chi2=0.984812707382755 (change=60.19531181333664 %)
[2025-06-04 04:23:17] 2025-06-04 02:07:01,099 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,100 | INFO     | sum of deviations: -55410595955.49999
[2025-06-04 04:23:17] 2025-06-04 02:07:01,100 | INFO     | mean x: 1748996725.5
[2025-06-04 04:23:17] 2025-06-04 02:07:01,100 | INFO     | mean y: 2531118.1785714286
[2025-06-04 04:23:17] 2025-06-04 02:07:01,101 | INFO     | -- intersect: 41511933868.796295
[2025-06-04 04:23:17] 2025-06-04 02:07:01,101 | INFO     | intersect: 41511933868.796295
[2025-06-04 04:23:17] 2025-06-04 02:07:01,101 | INFO     | chi2: 0.9823368636610731
[2025-06-04 04:23:17] 2025-06-04 02:07:01,101 | INFO     | current chi2=0.9823368636610731 (change=0.25140249543100207 %)
[2025-06-04 04:23:17] 2025-06-04 02:07:01,101 | INFO     | left removable region: 20
[2025-06-04 04:23:17] 2025-06-04 02:07:01,102 | INFO     | sum of square deviations: 1661798600.0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,103 | INFO     | sum of deviations: -27922684730.0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,103 | INFO     | mean x: 1748996695.0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,103 | INFO     | mean y: 2532666.6628571427
[2025-06-04 04:23:17] 2025-06-04 02:07:01,103 | INFO     | -- intersect: 29390379851.211555
[2025-06-04 04:23:17] 2025-06-04 02:07:01,103 | INFO     | intersect: 29390379851.211555
[2025-06-04 04:23:17] 2025-06-04 02:07:01,104 | INFO     | chi2: 0.16384874705448224
[2025-06-04 04:23:17] 2025-06-04 02:07:01,104 | INFO     | -- intersect: 29390379851.211555
[2025-06-04 04:23:17] 2025-06-04 02:07:01,104 | INFO     | current memory leak: -16.80 B/s (using 175 data points, chi2=0.16)
[2025-06-04 04:23:17] 2025-06-04 02:07:01,105 | INFO     | ..............................
[2025-06-04 04:23:17] 2025-06-04 02:07:01,105 | INFO     | . Timing measurements:
[2025-06-04 04:23:17] 2025-06-04 02:07:01,105 | INFO     | . get job = 0 s
[2025-06-04 04:23:17] 2025-06-04 02:07:01,105 | INFO     | . initial setup = 2 s
[2025-06-04 04:23:17] 2025-06-04 02:07:01,105 | INFO     | . payload setup = 14 s
[2025-06-04 04:23:17] 2025-06-04 02:07:01,105 | INFO     | . stage-in = 0 s
[2025-06-04 04:23:17] 2025-06-04 02:07:01,105 | INFO     | . payload execution = 12568 s
[2025-06-04 04:23:17] 2025-06-04 02:07:01,105 | INFO     | . stage-out = 4 s
[2025-06-04 04:23:17] 2025-06-04 02:07:01,105 | INFO     | . log creation = 1 s
[2025-06-04 04:23:17] 2025-06-04 02:07:01,106 | INFO     | ..............................
[2025-06-04 04:23:17] 2025-06-04 02:07:01,426 | INFO     | 
[2025-06-04 04:23:17] 2025-06-04 02:07:01,427 | INFO     | job summary report
[2025-06-04 04:23:17] 2025-06-04 02:07:01,427 | INFO     | --------------------------------------------------
[2025-06-04 04:23:17] 2025-06-04 02:07:01,427 | INFO     | PanDA job id: 6677549073
[2025-06-04 04:23:17] 2025-06-04 02:07:01,427 | INFO     | task id: 45006595
[2025-06-04 04:23:17] 2025-06-04 02:07:01,427 | INFO     | errors: (none)
[2025-06-04 04:23:17] 2025-06-04 02:07:01,427 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:23:17] 2025-06-04 02:07:01,427 | INFO     | pilot state: finished 
[2025-06-04 04:23:17] 2025-06-04 02:07:01,427 | INFO     | transexitcode: 0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | exeerrorcode: 0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | exeerrordiag: 
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | exitcode: 0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | exitmsg: OK
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | cpuconsumptiontime: 45917 s
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | nevents: 400
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | neventsw: 0
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | pid: 20791
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | pgrp: 20791
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | corecount: 8
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | event service: False
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | sizes: {0: 2405183, 1: 2405183, 12: 2405445, 22: 2405445, 12587: 2434573, 12588: 2434572, 12592: 2443755, 12693: 2443869}
[2025-06-04 04:23:17] 2025-06-04 02:07:01,428 | INFO     | --------------------------------------------------
[2025-06-04 04:23:17] 2025-06-04 02:07:01,429 | INFO     | 
[2025-06-04 04:23:17] 2025-06-04 02:07:01,429 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 04:23:17] 2025-06-04 02:07:01,653 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,653 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,654 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,654 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,654 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,655 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:23:17] 2025-06-04 02:07:01,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,655 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:23:17] 2025-06-04 02:07:01,656 | INFO     | job 6677549073 has completed (purged errors)
[2025-06-04 04:23:17] 2025-06-04 02:07:01,656 | INFO     | overall cleanup function is called
[2025-06-04 04:23:17] 2025-06-04 02:07:02,664 | INFO     | --- collectZombieJob: --- 10, [20791]
[2025-06-04 04:23:17] 2025-06-04 02:07:02,665 | INFO     | zombie collector waiting for pid 20791
[2025-06-04 04:23:17] 2025-06-04 02:07:02,665 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:23:17] 2025-06-04 02:07:02,665 | INFO     | collected zombie processes
[2025-06-04 04:23:17] 2025-06-04 02:07:02,665 | INFO     | will attempt to kill all subprocesses of pid=20791
[2025-06-04 04:23:17] 2025-06-04 02:07:02,769 | INFO     | process IDs to be killed: [20791] (in reverse order)
[2025-06-04 04:23:17] 2025-06-04 02:07:03,665 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:23:17] 2025-06-04 02:07:03,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:23:17] 2025-06-04 02:07:03,668 | INFO     | did not find any defunct processes belonging to 20791
[2025-06-04 04:23:17] 2025-06-04 02:07:03,671 | INFO     | did not find any defunct processes belonging to 20791
[2025-06-04 04:23:17] 2025-06-04 02:07:03,672 | INFO     | ready for new job
[2025-06-04 04:23:17] 2025-06-04 02:07:03,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:23:17] 2025-06-04 02:07:03,673 | INFO     | **************************************
[2025-06-04 04:23:17] 2025-06-04 02:07:03,674 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:23:17] 2025-06-04 02:07:03,674 | INFO     | **************************************
[2025-06-04 04:23:17] 2025-06-04 02:07:03,674 | INFO     | 
[2025-06-04 04:23:17] 2025-06-04 02:07:03,675 | INFO     | pilot is running in a VM
[2025-06-04 04:23:17] 2025-06-04 02:07:03,675 | INFO     | architecture information:
[2025-06-04 04:23:17] 2025-06-04 02:07:03,675 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:23:17] 2025-06-04 02:07:03,915 | INFO     | cat /etc/os-release:
[2025-06-04 04:23:17] NAME="CentOS Linux"
[2025-06-04 04:23:17] VERSION="7 (Core)"
[2025-06-04 04:23:17] ID="centos"
[2025-06-04 04:23:17] ID_LIKE="rhel fedora"
[2025-06-04 04:23:17] VERSION_ID="7"
[2025-06-04 04:23:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:23:17] ANSI_COLOR="0;31"
[2025-06-04 04:23:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:23:17] HOME_URL="https://www.centos.org/"
[2025-06-04 04:23:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:23:17] 
[2025-06-04 04:23:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:23:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:23:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:23:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:23:17] 
[2025-06-04 04:23:17] 2025-06-04 02:07:03,915 | INFO     | **************************************
[2025-06-04 04:23:17] 2025-06-04 02:07:04,420 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 04:23:17] 2025-06-04 02:07:04,674 | INFO     | sufficient remaining disk space (496946380800 B)
[2025-06-04 04:23:17] 2025-06-04 02:07:04,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:23:17] 2025-06-04 02:07:04,675 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:23:17] 2025-06-04 02:07:04,675 | INFO     | update_server=False
[2025-06-04 04:23:17] 2025-06-04 02:07:04,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:23:17] 2025-06-04 02:07:04,907 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:23:17] 2025-06-04 02:07:04,908 | INFO     | aborting loop
[2025-06-04 04:23:17] 2025-06-04 02:07:04,923 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:23:17] 2025-06-04 02:07:04,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:23:17] 2025-06-04 02:07:04,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:23:17] 2025-06-04 02:07:04,927 | INFO     | all job control threads have been joined
[2025-06-04 04:23:17] 2025-06-04 02:07:05,388 | INFO     | all payload control threads have been joined
[2025-06-04 04:23:17] 2025-06-04 02:07:05,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:23:17] 2025-06-04 02:07:05,535 | INFO     | all data control threads have been joined
[2025-06-04 04:23:17] 2025-06-04 02:07:05,681 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:05,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:23:17] 2025-06-04 02:07:05,883 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:05,914 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:05,934 | INFO     | [job] control thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:06,076 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:06,131 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:06,135 | INFO     | [job] validate thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:06,219 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:06,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:23:17] 2025-06-04 02:07:06,395 | INFO     | [payload] control thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:06,541 | INFO     | [data] control thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:06,789 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:06,850 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:06,872 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:07,242 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:07,837 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:09,398 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:23:17] 2025-06-04 02:07:09,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918202558272)>', '<ExcThread(monitor, started 139917535467264)>']
[2025-06-04 04:23:17] 2025-06-04 02:07:09,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:23:17] 2025-06-04 02:07:09,952 | INFO     | [monitor] control thread has ended
[2025-06-04 04:23:17] 2025-06-04 02:07:14,755 | INFO     | all workflow threads have been joined
[2025-06-04 04:23:17] 2025-06-04 02:07:14,756 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:23:17] 2025-06-04 02:07:14,756 | INFO     | traces error code: 0
[2025-06-04 04:23:17] 2025-06-04 02:07:14,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:23:17] 2025-06-04 02:07:15,115 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:23:17] 2025-06-04 02:07:15,200 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:23:17] 2025-06-04 02:07:15,288 [wrapper] pilotpid: 12902
[2025-06-04 04:23:17] 2025-06-04 02:07:15,424 [wrapper] Pilot exit status: 0
[2025-06-04 04:23:17] 2025-06-04 02:07:15,925 [wrapper] pandaids: 6677549073
[2025-06-04 04:23:17] 2025-06-04 02:07:16,727 [wrapper] cleanup supervisor_pilot 12843 12903
[2025-06-04 04:23:17] 2025-06-04 02:07:16,841 [wrapper] Test setup, not cleaning
[2025-06-04 04:23:17] 2025-06-04 02:07:16,941 [wrapper] apfmon messages muted
[2025-06-04 04:23:17] 2025-06-04 02:07:17,038 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:23:17] 2025-06-04 02:07:17,089 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:23:17]  *** Error codes and diagnostics ***
[2025-06-04 04:23:17]     "exeErrorCode": 0,
[2025-06-04 04:23:17]     "exeErrorDiag": "",
[2025-06-04 04:23:17]     "pilotErrorCode": 0,
[2025-06-04 04:23:17]     "pilotErrorDiag": "",
[2025-06-04 04:23:17]  *** Listing of results directory ***
[2025-06-04 04:23:17] total 393476
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:43 pilot3.tar.gz
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc      5111 Jun  3 11:01 queuedata.json
[2025-06-04 04:23:17] -rwx------. 1 boinc boinc     37140 Jun  3 11:05 runpilot2-wrapper.sh
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc       100 Jun  4 00:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:23:17] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 00:34 run_atlas
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc       105 Jun  4 00:34 job.xml
[2025-06-04 04:23:17] -rw-r--r--. 2 boinc boinc 213934058 Jun  4 00:34 EVNT.45006593._001064.pool.root.1
[2025-06-04 04:23:17] -rw-r--r--. 2 boinc boinc    508872 Jun  4 00:34 input.tar.gz
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc      6392 Jun  4 00:34 init_data.xml
[2025-06-04 04:23:17] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:34 start_atlas.sh
[2025-06-04 04:23:17] drwxrwx--x. 2 boinc boinc        68 Jun  4 00:34 shared
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc         0 Jun  4 00:34 boinc_lockfile
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc      2524 Jun  4 00:34 pandaJob.out
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc    986861 Jun  4 00:34 agis_schedconf.cvmfs.json
[2025-06-04 04:23:17] drwx------. 4 boinc boinc      4096 Jun  4 00:34 pilot3
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc 182233937 Jun  4 04:04 HITS.45006595._026595.pool.root.1
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc       531 Jun  4 04:04 boinc_task_state.xml
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc      1020 Jun  4 04:05 memory_monitor_summary.json
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc   1603667 Jun  4 04:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc    359169 Jun  4 04:05 log.45006595._026595.job.log.tgz.1
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc        95 Jun  4 04:06 pilot_heartbeat.json
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc      7694 Jun  4 04:07 heartbeat.json
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc      4417 Jun  4 04:07 pilotlog.txt
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc   1107806 Jun  4 04:07 log.45006595._026595.job.log.1
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc       357 Jun  4 04:07 output.list
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc       620 Jun  4 04:07 runtime_log
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc   1484800 Jun  4 04:07 result.tar.gz
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc      8673 Jun  4 04:07 runtime_log.err
[2025-06-04 04:23:17] -rw-------. 1 boinc boinc       656 Jun  4 04:07 KGwLDmVlcg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn6iKDmBKNghm.diag
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc      8192 Jun  4 04:23 boinc_mmap_file
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc        28 Jun  4 04:23 wrapper_checkpoint.txt
[2025-06-04 04:23:17] -rw-r--r--. 1 boinc boinc     20499 Jun  4 04:23 stderr.txt
[2025-06-04 04:23:18] HITS file was successfully produced:
[2025-06-04 04:23:18] -rw-------. 1 boinc boinc 182233937 Jun  4 04:04 shared/HITS.pool.root.1
[2025-06-04 04:23:18]  *** Contents of shared directory: ***
[2025-06-04 04:23:18] total 388852
[2025-06-04 04:23:18] -rw-r--r--. 2 boinc boinc 213934058 Jun  4 00:34 ATLAS.root_0
[2025-06-04 04:23:18] -rw-r--r--. 2 boinc boinc    508872 Jun  4 00:34 input.tar.gz
[2025-06-04 04:23:18] -rw-r--r--. 2 boinc boinc     15093 Jun  4 00:34 start_atlas.sh
[2025-06-04 04:23:18] -rw-------. 1 boinc boinc 182233937 Jun  4 04:04 HITS.pool.root.1
[2025-06-04 04:23:18] -rw-------. 1 boinc boinc   1484800 Jun  4 04:07 result.tar.gz
04:23:19 (8203): run_atlas exited; CPU time 46075.195269
04:23:19 (8203): called boinc_finish(0)

</stderr_txt>
]]>

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