Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:43:51 (5253): wrapper (7.7.26015): starting
21:43:51 (5253): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:43:51] Arguments: --nthreads 8
[2025-06-03 21:43:51] Threads: 8
[2025-06-03 21:43:51] Checking for CVMFS
[2025-06-03 21:43:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:43:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:43:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:43:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:43:53] 2.11.2.0 15047 32213 93572 146753 3 16 14033734 25165825 4669 130560 0 17637004 99.817 19140213 2072 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 21:43:53] CVMFS is ok
[2025-06-03 21:43:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:43:53] Checking for apptainer binary...
[2025-06-03 21:43:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:43:53] Running /usr/bin/apptainer --version
[2025-06-03 21:43:53] apptainer version 1.3.2-1.el7
[2025-06-03 21:43:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:43:59] cg-vwn358.simple-grid.lan
[2025-06-03 21:43:59] apptainer works
[2025-06-03 21:43:59] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:43:59] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:43:59] Starting ATLAS job with PandaID=6677576615
[2025-06-03 21:43:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:50:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:50:12] 2025-06-03 23:34:35,620 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6677576615/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:50:12] 2025-06-03 23:34:35,620 | INFO     | extracted standard info from prmon json
[2025-06-04 01:50:12] 2025-06-03 23:34:35,620 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:50:12] 2025-06-03 23:34:35,621 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:50:12] 2025-06-03 23:34:35,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:50:12] 2025-06-03 23:34:35,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:50:12] 2025-06-03 23:34:35,626 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:50:12] 2025-06-03 23:34:35,626 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 01:50:12] 2025-06-03 23:34:35,628 | INFO     | sum of deviations: 68785976194.0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,628 | INFO     | mean x: 1748987022.5
[2025-06-04 01:50:12] 2025-06-03 23:34:35,628 | INFO     | mean y: 2429371.728971963
[2025-06-04 01:50:12] 2025-06-03 23:34:35,628 | INFO     | -- intersect: -39586725558.58065
[2025-06-04 01:50:12] 2025-06-03 23:34:35,628 | INFO     | intersect: -39586725558.58065
[2025-06-04 01:50:12] 2025-06-03 23:34:35,629 | INFO     | chi2: 6.525371003174741
[2025-06-04 01:50:12] 2025-06-03 23:34:35,629 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,631 | INFO     | sum of deviations: 81778383213.00002
[2025-06-04 01:50:12] 2025-06-03 23:34:35,631 | INFO     | mean x: 1748986870.0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,631 | INFO     | mean y: 2438688.3157894737
[2025-06-04 01:50:12] 2025-06-03 23:34:35,631 | INFO     | -- intersect: -50523888437.00004
[2025-06-04 01:50:12] 2025-06-03 23:34:35,632 | INFO     | intersect: -50523888437.00004
[2025-06-04 01:50:12] 2025-06-03 23:34:35,632 | INFO     | chi2: 5.7424664193581965
[2025-06-04 01:50:12] 2025-06-03 23:34:35,632 | INFO     | current chi2=5.7424664193581965 (change=11.99785550025652 %)
[2025-06-04 01:50:12] 2025-06-03 23:34:35,632 | INFO     | right removable region: 208
[2025-06-04 01:50:12] 2025-06-03 23:34:35,633 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,634 | INFO     | sum of deviations: -4389988525.000002
[2025-06-04 01:50:12] 2025-06-03 23:34:35,634 | INFO     | mean x: 1748987175.0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,634 | INFO     | mean y: 2482949.325358852
[2025-06-04 01:50:12] 2025-06-03 23:34:35,635 | INFO     | -- intersect: 2714813839.916744
[2025-06-04 01:50:12] 2025-06-03 23:34:35,635 | INFO     | intersect: 2714813839.916744
[2025-06-04 01:50:12] 2025-06-03 23:34:35,635 | INFO     | chi2: 1.7963611318639088
[2025-06-04 01:50:12] 2025-06-03 23:34:35,635 | INFO     | current chi2=1.7963611318639088 (change=72.47112645411367 %)
[2025-06-04 01:50:12] 2025-06-03 23:34:35,636 | INFO     | sum of square deviations: 2632440055.0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,637 | INFO     | sum of deviations: -29672643275.0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,637 | INFO     | mean x: 1748987327.5
[2025-06-04 01:50:12] 2025-06-03 23:34:35,638 | INFO     | mean y: 2502210.598039216
[2025-06-04 01:50:12] 2025-06-03 23:34:35,638 | INFO     | -- intersect: 19716940517.685375
[2025-06-04 01:50:12] 2025-06-03 23:34:35,638 | INFO     | intersect: 19716940517.685375
[2025-06-04 01:50:12] 2025-06-03 23:34:35,638 | INFO     | chi2: 0.9947009930081375
[2025-06-04 01:50:12] 2025-06-03 23:34:35,638 | INFO     | current chi2=0.9947009930081375 (change=44.62689181122321 %)
[2025-06-04 01:50:12] 2025-06-03 23:34:35,639 | INFO     | sum of square deviations: 2443580700.0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,640 | INFO     | sum of deviations: -27124428909.000004
[2025-06-04 01:50:12] 2025-06-03 23:34:35,640 | INFO     | mean x: 1748987480.0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,640 | INFO     | mean y: 2500110.1256281408
[2025-06-04 01:50:12] 2025-06-03 23:34:35,640 | INFO     | -- intersect: 19416750093.353546
[2025-06-04 01:50:12] 2025-06-03 23:34:35,641 | INFO     | intersect: 19416750093.353546
[2025-06-04 01:50:12] 2025-06-03 23:34:35,641 | INFO     | chi2: 0.9799916945677853
[2025-06-04 01:50:12] 2025-06-03 23:34:35,641 | INFO     | current chi2=0.9799916945677853 (change=1.4787658345317292 %)
[2025-06-04 01:50:12] 2025-06-03 23:34:35,641 | INFO     | left removable region: 30
[2025-06-04 01:50:12] 2025-06-03 23:34:35,641 | INFO     | sum of square deviations: 1748737904.5
[2025-06-04 01:50:12] 2025-06-03 23:34:35,643 | INFO     | sum of deviations: 4429529396.000001
[2025-06-04 01:50:12] 2025-06-03 23:34:35,643 | INFO     | mean x: 1748987754.5
[2025-06-04 01:50:12] 2025-06-03 23:34:35,643 | INFO     | mean y: 2495723.9213483147
[2025-06-04 01:50:12] 2025-06-03 23:34:35,643 | INFO     | -- intersect: -4427666538.740228
[2025-06-04 01:50:12] 2025-06-03 23:34:35,643 | INFO     | intersect: -4427666538.740228
[2025-06-04 01:50:12] 2025-06-03 23:34:35,644 | INFO     | chi2: 0.0005940089900115519
[2025-06-04 01:50:12] 2025-06-03 23:34:35,644 | INFO     | -- intersect: -4427666538.740228
[2025-06-04 01:50:12] 2025-06-03 23:34:35,644 | INFO     | current memory leak: 2.53 B/s (using 178 data points, chi2=0.00)
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | ..............................
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | . Timing measurements:
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | . get job = 0 s
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | . initial setup = 8 s
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | . payload setup = 154 s
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | . stage-in = 0 s
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | . payload execution = 13199 s
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | . stage-out = 6 s
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | . log creation = 1 s
[2025-06-04 01:50:12] 2025-06-03 23:34:35,645 | INFO     | ..............................
[2025-06-04 01:50:12] 2025-06-03 23:34:35,810 | INFO     | 
[2025-06-04 01:50:12] 2025-06-03 23:34:35,811 | INFO     | job summary report
[2025-06-04 01:50:12] 2025-06-03 23:34:35,811 | INFO     | --------------------------------------------------
[2025-06-04 01:50:12] 2025-06-03 23:34:35,811 | INFO     | PanDA job id: 6677576615
[2025-06-04 01:50:12] 2025-06-03 23:34:35,811 | INFO     | task id: 45006595
[2025-06-04 01:50:12] 2025-06-03 23:34:35,811 | INFO     | errors: (none)
[2025-06-04 01:50:12] 2025-06-03 23:34:35,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:50:12] 2025-06-03 23:34:35,811 | INFO     | pilot state: finished 
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | transexitcode: 0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | exeerrorcode: 0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | exeerrordiag: 
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | exitcode: 0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | exitmsg: OK
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | cpuconsumptiontime: 48996 s
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | nevents: 400
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | neventsw: 0
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | pid: 20290
[2025-06-04 01:50:12] 2025-06-03 23:34:35,812 | INFO     | pgrp: 20290
[2025-06-04 01:50:12] 2025-06-03 23:34:35,813 | INFO     | corecount: 8
[2025-06-04 01:50:12] 2025-06-03 23:34:35,813 | INFO     | event service: False
[2025-06-04 01:50:12] 2025-06-03 23:34:35,813 | INFO     | sizes: {0: 2404957, 1: 2405041, 2: 2405212, 12: 2405240, 23: 2405268, 34: 2405296, 45: 2405452, 55: 2405480, 66: 2405508, 77: 2405536, 88: 2405592, 95: 2406106, 98
[2025-06-04 01:50:12] 2025-06-03 23:34:35,813 | INFO     | --------------------------------------------------
[2025-06-04 01:50:12] 2025-06-03 23:34:35,813 | INFO     | 
[2025-06-04 01:50:12] 2025-06-03 23:34:35,813 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-04 01:50:12] 2025-06-03 23:34:36,230 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,231 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,232 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,232 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:50:12] 2025-06-03 23:34:36,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:50:12] 2025-06-03 23:34:36,233 | INFO     | job 6677576615 has completed (purged errors)
[2025-06-04 01:50:12] 2025-06-03 23:34:36,233 | INFO     | overall cleanup function is called
[2025-06-04 01:50:12] 2025-06-03 23:34:37,243 | INFO     | --- collectZombieJob: --- 10, [20290]
[2025-06-04 01:50:12] 2025-06-03 23:34:37,244 | INFO     | zombie collector waiting for pid 20290
[2025-06-04 01:50:12] 2025-06-03 23:34:37,244 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:50:12] 2025-06-03 23:34:37,244 | INFO     | collected zombie processes
[2025-06-04 01:50:12] 2025-06-03 23:34:37,244 | INFO     | will attempt to kill all subprocesses of pid=20290
[2025-06-04 01:50:12] 2025-06-03 23:34:37,417 | INFO     | process IDs to be killed: [20290] (in reverse order)
[2025-06-04 01:50:12] 2025-06-03 23:34:38,311 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:50:12] 2025-06-03 23:34:38,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:50:12] 2025-06-03 23:34:38,315 | INFO     | did not find any defunct processes belonging to 20290
[2025-06-04 01:50:12] 2025-06-03 23:34:38,318 | INFO     | did not find any defunct processes belonging to 20290
[2025-06-04 01:50:12] 2025-06-03 23:34:38,318 | INFO     | ready for new job
[2025-06-04 01:50:12] 2025-06-03 23:34:38,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:50:12] 2025-06-03 23:34:38,320 | INFO     | **************************************
[2025-06-04 01:50:12] 2025-06-03 23:34:38,320 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:50:12] 2025-06-03 23:34:38,320 | INFO     | **************************************
[2025-06-04 01:50:12] 2025-06-03 23:34:38,320 | INFO     | 
[2025-06-04 01:50:12] 2025-06-03 23:34:38,321 | INFO     | pilot is running in a VM
[2025-06-04 01:50:12] 2025-06-03 23:34:38,321 | INFO     | architecture information:
[2025-06-04 01:50:12] 2025-06-03 23:34:38,323 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:50:12] 2025-06-03 23:34:38,503 | INFO     | cat /etc/os-release:
[2025-06-04 01:50:12] NAME="CentOS Linux"
[2025-06-04 01:50:12] VERSION="7 (Core)"
[2025-06-04 01:50:12] ID="centos"
[2025-06-04 01:50:12] ID_LIKE="rhel fedora"
[2025-06-04 01:50:12] VERSION_ID="7"
[2025-06-04 01:50:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:50:12] ANSI_COLOR="0;31"
[2025-06-04 01:50:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:50:12] HOME_URL="https://www.centos.org/"
[2025-06-04 01:50:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:50:12] 
[2025-06-04 01:50:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:50:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:50:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:50:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:50:12] 
[2025-06-04 01:50:12] 2025-06-03 23:34:38,503 | INFO     | **************************************
[2025-06-04 01:50:12] 2025-06-03 23:34:39,007 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-04 01:50:12] 2025-06-03 23:34:39,203 | INFO     | sufficient remaining disk space (496440967168 B)
[2025-06-04 01:50:12] 2025-06-03 23:34:39,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:50:12] 2025-06-03 23:34:39,204 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:50:12] 2025-06-03 23:34:39,204 | INFO     | update_server=False
[2025-06-04 01:50:12] 2025-06-03 23:34:39,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:50:12] 2025-06-03 23:34:39,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:50:12] 2025-06-03 23:34:39,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:50:12] 2025-06-03 23:34:39,208 | INFO     | aborting loop
[2025-06-04 01:50:12] 2025-06-03 23:34:39,297 | INFO     | all payload control threads have been joined
[2025-06-04 01:50:12] 2025-06-03 23:34:39,307 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:50:12] 2025-06-03 23:34:39,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:50:12] 2025-06-03 23:34:39,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:50:12] 2025-06-03 23:34:39,903 | INFO     | all data control threads have been joined
[2025-06-04 01:50:12] 2025-06-03 23:34:40,211 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:40,214 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:40,304 | INFO     | [payload] control thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:40,338 | INFO     | all job control threads have been joined
[2025-06-04 01:50:12] 2025-06-03 23:34:40,358 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:40,563 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:40,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:50:12] 2025-06-03 23:34:40,760 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:40,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:50:12] 2025-06-03 23:34:40,796 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:40,910 | INFO     | [data] control thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:40,919 | INFO     | [job] validate thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:40,943 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:41,344 | INFO     | [job] control thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:41,515 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:41,746 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:41,796 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:42,586 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:43,212 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:50:12] 2025-06-03 23:34:43,736 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140232963757888)>', '<ExcThread(monitor, started 140232217323264)>']
[2025-06-04 01:50:12] 2025-06-03 23:34:44,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:50:12] 2025-06-03 23:34:44,338 | INFO     | [monitor] control thread has ended
[2025-06-04 01:50:12] 2025-06-03 23:34:48,761 | INFO     | all workflow threads have been joined
[2025-06-04 01:50:12] 2025-06-03 23:34:48,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:50:12] 2025-06-03 23:34:48,762 | INFO     | traces error code: 0
[2025-06-04 01:50:12] 2025-06-03 23:34:48,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:50:12] 2025-06-03 23:34:49,156 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:50:12] 2025-06-03 23:34:49,200 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:50:12] 2025-06-03 23:34:49,302 [wrapper] pilotpid: 11691
[2025-06-04 01:50:12] 2025-06-03 23:34:49,435 [wrapper] Pilot exit status: 0
[2025-06-04 01:50:12] 2025-06-03 23:34:49,594 [wrapper] pandaids: 6677576615
[2025-06-04 01:50:12] 2025-06-03 23:34:49,705 [wrapper] cleanup supervisor_pilot 27477 11692
[2025-06-04 01:50:12] 2025-06-03 23:34:49,861 [wrapper] Test setup, not cleaning
[2025-06-04 01:50:12] 2025-06-03 23:34:50,015 [wrapper] apfmon messages muted
[2025-06-04 01:50:12] 2025-06-03 23:34:50,142 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:50:12] 2025-06-03 23:34:50,272 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:50:12]  *** Error codes and diagnostics ***
[2025-06-04 01:50:12]     "exeErrorCode": 0,
[2025-06-04 01:50:12]     "exeErrorDiag": "",
[2025-06-04 01:50:12]     "pilotErrorCode": 0,
[2025-06-04 01:50:12]     "pilotErrorDiag": "",
[2025-06-04 01:50:12]  *** Listing of results directory ***
[2025-06-04 01:50:12] total 393040
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc    495897 Jun  3 12:21 pilot3.tar.gz
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc      5111 Jun  3 12:26 queuedata.json
[2025-06-04 01:50:12] -rwx------. 1 boinc boinc     37140 Jun  3 12:27 runpilot2-wrapper.sh
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:50:12] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:43 run_atlas
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:43 job.xml
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc      6392 Jun  3 21:43 init_data.xml
[2025-06-04 01:50:12] -rw-r--r--. 2 boinc boinc 212698991 Jun  3 21:43 EVNT.45006593._001156.pool.root.1
[2025-06-04 01:50:12] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:43 start_atlas.sh
[2025-06-04 01:50:12] drwxrwx--x. 2 boinc boinc        68 Jun  3 21:43 shared
[2025-06-04 01:50:12] -rw-r--r--. 2 boinc boinc    508879 Jun  3 21:43 input.tar.gz
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:43 boinc_lockfile
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc      2525 Jun  3 21:43 pandaJob.out
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc    986893 Jun  3 21:47 agis_schedconf.cvmfs.json
[2025-06-04 01:50:12] drwx------. 4 boinc boinc      4096 Jun  3 21:47 pilot3
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc 182851724 Jun  4 01:31 HITS.45006595._028916.pool.root.1
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc       531 Jun  4 01:31 boinc_task_state.xml
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc      1012 Jun  4 01:32 memory_monitor_summary.json
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc   1603667 Jun  4 01:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc    385223 Jun  4 01:32 log.45006595._028916.job.log.tgz.1
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc        95 Jun  4 01:34 pilot_heartbeat.json
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc      7685 Jun  4 01:34 heartbeat.json
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc      4416 Jun  4 01:34 pilotlog.txt
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc   1166331 Jun  4 01:34 log.45006595._028916.job.log.1
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc       357 Jun  4 01:34 output.list
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc       620 Jun  4 01:34 runtime_log
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc   1566720 Jun  4 01:34 result.tar.gz
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc       657 Jun  4 01:34 zhMNDmW2dg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaUjKDmR0cBvm.diag
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc      8659 Jun  4 01:34 runtime_log.err
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc        28 Jun  4 01:50 wrapper_checkpoint.txt
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc      8192 Jun  4 01:50 boinc_mmap_file
[2025-06-04 01:50:12] -rw-r--r--. 1 boinc boinc     20530 Jun  4 01:50 stderr.txt
[2025-06-04 01:50:12] HITS file was successfully produced:
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc 182851724 Jun  4 01:31 shared/HITS.pool.root.1
[2025-06-04 01:50:12]  *** Contents of shared directory: ***
[2025-06-04 01:50:12] total 388332
[2025-06-04 01:50:12] -rw-r--r--. 2 boinc boinc 212698991 Jun  3 21:43 ATLAS.root_0
[2025-06-04 01:50:12] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:43 start_atlas.sh
[2025-06-04 01:50:12] -rw-r--r--. 2 boinc boinc    508879 Jun  3 21:43 input.tar.gz
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc 182851724 Jun  4 01:31 HITS.pool.root.1
[2025-06-04 01:50:12] -rw-------. 1 boinc boinc   1566720 Jun  4 01:34 result.tar.gz
01:50:14 (5253): run_atlas exited; CPU time 49183.222068
01:50:14 (5253): called boinc_finish(0)

</stderr_txt>
]]>

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