Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:37:16 (325784): wrapper (7.7.26015): starting
07:37:16 (325784): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:37:16] Arguments: --nthreads 8
[2025-06-03 07:37:16] Threads: 8
[2025-06-03 07:37:16] Checking for CVMFS
[2025-06-03 07:37:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:37:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:37:17] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:37:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:37:17] 2.12.6.0 61263 29841 160812 146741 2 197 36648555 40960001 12294 16776704 1 457653599 99.788 260246544 31680 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 07:37:17] CVMFS is ok
[2025-06-03 07:37:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 07:37:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 07:37:17] Further information can be found at the LHC@home message board.
[2025-06-03 07:37:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:37:17] Checking for apptainer binary...
[2025-06-03 07:37:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:37:17] Running /usr/bin/apptainer --version
[2025-06-03 07:37:17] apptainer version 1.4.1-1.el9
[2025-06-03 07:37:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:37:17] c8-7-5.aglt2.org
[2025-06-03 07:37:17] apptainer works
[2025-06-03 07:37:17] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:37:17] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:37:17] Starting ATLAS job with PandaID=6677495954
[2025-06-03 07:37:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:23:22]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:23:22]  is_altstaged=None
[2025-06-03 08:23:22]  is_tar=False
[2025-06-03 08:23:22]  lfn=log.45006595._023099.job.log.tgz.1
[2025-06-03 08:23:22]  mtime=0
[2025-06-03 08:23:22]  protocol_id=None
[2025-06-03 08:23:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 08:23:22]  replicas=None
[2025-06-03 08:23:22]  scope=mc23_13p6TeV
[2025-06-03 08:23:22]  status=None
[2025-06-03 08:23:22]  status_code=0
[2025-06-03 08:23:22]  storage_token=
[2025-06-03 08:23:22]  surl=/tmp/boinchome/slots/15/PanDA_Pilot-6677495954/log.45006595._023099.job.log.tgz.1
[2025-06-03 08:23:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/9b/log.45006595._023099.job.log.tgz.1
[2025-06-03 08:23:22]  workdir=None
[2025-06-03 08:23:22] ]
[2025-06-03 08:23:22] 2025-06-03 12:23:01,486 | INFO     | transferring file log.45006595._023099.job.log.tgz.1 from /tmp/boinchome/slots/15/PanDA_Pilot-6677495954/log.45006595._023099.job.log.tgz.1 to /tmp/boinchome/slots
[2025-06-03 08:23:22] 2025-06-03 12:23:01,486 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/15/PanDA_Pilot-6677495954/log.45006595._023099.job.log.tgz.1 /tmp/boinchome/slots/15/log.45006595._023099.j
[2025-06-03 08:23:22] 2025-06-03 12:23:01,504 | INFO     | adding to output.list: log.45006595._023099.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/9b/log.45006595._023099.job.log.tg
[2025-06-03 08:23:22] 2025-06-03 12:23:01,504 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 08:23:22] 2025-06-03 12:23:01,505 | INFO     | summary of transferred files:
[2025-06-03 08:23:22] 2025-06-03 12:23:01,505 | INFO     |  -- lfn=log.45006595._023099.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 08:23:22] 2025-06-03 12:23:01,505 | INFO     | stage-out finished correctly
[2025-06-03 08:23:22] 2025-06-03 12:23:02,408 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 08:23:22] 2025-06-03 12:23:03,597 | INFO     | monitor loop #201: job 0:6677495954 is in state 'finished'
[2025-06-03 08:23:22] 2025-06-03 12:23:03,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:23:22] 2025-06-03 12:23:04,698 | INFO     | job 6677495954 has state=finished
[2025-06-03 08:23:22] 2025-06-03 12:23:04,698 | INFO     | preparing for final server update for job 6677495954 in state='finished'
[2025-06-03 08:23:22] 2025-06-03 12:23:04,699 | INFO     | this job has now completed (state=finished)
[2025-06-03 08:23:22] 2025-06-03 12:23:04,699 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 08:23:22] 2025-06-03 12:23:04,699 | INFO     | log transfer has been attempted: DONE
[2025-06-03 08:23:22] 2025-06-03 12:23:04,699 | INFO     | job 6677495954 has finished - writing final server update
[2025-06-03 08:23:22] 2025-06-03 12:23:04,699 | INFO     | total number of processed events: 400 (read)
[2025-06-03 08:23:22] 2025-06-03 12:23:04,716 | INFO     | executing command: lscpu
[2025-06-03 08:23:22] 2025-06-03 12:23:04,805 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 08:23:22] 2025-06-03 12:23:06,099 | INFO     | monitor loop #202: job 0:6677495954 is in state 'finished'
[2025-06-03 08:23:22] 2025-06-03 12:23:06,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:23:22] 2025-06-03 12:23:08,602 | INFO     | monitor loop #203: job 0:6677495954 is in state 'finished'
[2025-06-03 08:23:22] 2025-06-03 12:23:08,603 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:23:22] 2025-06-03 12:23:08,956 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 08:23:22] 2025-06-03 12:23:08,957 | INFO     | using path: /tmp/boinchome/slots/15/PanDA_Pilot-6677495954/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:23:22] 2025-06-03 12:23:08,957 | INFO     | extracted standard info from prmon json
[2025-06-03 08:23:22] 2025-06-03 12:23:08,957 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:23:22] 2025-06-03 12:23:08,957 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:23:22] 2025-06-03 12:23:08,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:23:22] 2025-06-03 12:23:08,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | sum of square deviations: 17003109.5
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | sum of deviations: 4165201939.0
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | mean x: 1748952105.5
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | mean y: 2082784.2105263157
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | -- intersect: -428433592528.3982
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | intersect: -428433592528.3982
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | chi2: 0.6974977030391205
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | -- intersect: -428433592528.3982
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | current memory leak: 244.97 B/s (using 38 data points, chi2=0.70)
[2025-06-03 08:23:22] 2025-06-03 12:23:08,959 | INFO     | ..............................
[2025-06-03 08:23:22] 2025-06-03 12:23:08,960 | INFO     | . Timing measurements:
[2025-06-03 08:23:22] 2025-06-03 12:23:08,960 | INFO     | . get job = 0 s
[2025-06-03 08:23:22] 2025-06-03 12:23:08,960 | INFO     | . initial setup = 2 s
[2025-06-03 08:23:22] 2025-06-03 12:23:08,960 | INFO     | . payload setup = 6 s
[2025-06-03 08:23:22] 2025-06-03 12:23:08,960 | INFO     | . stage-in = 0 s
[2025-06-03 08:23:22] 2025-06-03 12:23:08,960 | INFO     | . payload execution = 2708 s
[2025-06-03 08:23:22] 2025-06-03 12:23:08,960 | INFO     | . stage-out = 0 s
[2025-06-03 08:23:22] 2025-06-03 12:23:08,960 | INFO     | . log creation = 0 s
[2025-06-03 08:23:22] 2025-06-03 12:23:08,960 | INFO     | ..............................
[2025-06-03 08:23:22] 2025-06-03 12:23:09,136 | INFO     | 
[2025-06-03 08:23:22] 2025-06-03 12:23:09,136 | INFO     | job summary report
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | --------------------------------------------------
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | PanDA job id: 6677495954
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | task id: 45006595
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | errors: (none)
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | pilot state: finished 
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | transexitcode: 0
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | exeerrorcode: 0
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | exeerrordiag: 
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | exitcode: 0
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | exitmsg: OK
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | cpuconsumptiontime: 17199 s
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | nevents: 400
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | neventsw: 0
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | pid: 350764
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | pgrp: 350764
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | corecount: 8
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | event service: False
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | sizes: {0: 2405183, 4: 2405389, 11: 2405417, 2718: 2430600, 2720: 2439543, 2721: 2439599, 2727: 2439897}
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | --------------------------------------------------
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | 
[2025-06-03 08:23:22] 2025-06-03 12:23:09,137 | INFO     | executing command: ls -lF /tmp/boinchome/slots/15
[2025-06-03 08:23:22] 2025-06-03 12:23:09,157 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | job 6677495954 has completed (purged errors)
[2025-06-03 08:23:22] 2025-06-03 12:23:09,159 | INFO     | overall cleanup function is called
[2025-06-03 08:23:22] 2025-06-03 12:23:10,167 | INFO     | --- collectZombieJob: --- 10, [350764]
[2025-06-03 08:23:22] 2025-06-03 12:23:10,167 | INFO     | zombie collector waiting for pid 350764
[2025-06-03 08:23:22] 2025-06-03 12:23:10,167 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:23:22] 2025-06-03 12:23:10,167 | INFO     | collected zombie processes
[2025-06-03 08:23:22] 2025-06-03 12:23:10,167 | INFO     | will attempt to kill all subprocesses of pid=350764
[2025-06-03 08:23:22] 2025-06-03 12:23:10,637 | INFO     | process IDs to be killed: [350764] (in reverse order)
[2025-06-03 08:23:22] 2025-06-03 12:23:10,814 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:23:22] 2025-06-03 12:23:10,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:23:22] 2025-06-03 12:23:10,870 | INFO     | did not find any defunct processes belonging to 350764
[2025-06-03 08:23:22] 2025-06-03 12:23:10,918 | INFO     | did not find any defunct processes belonging to 350764
[2025-06-03 08:23:22] 2025-06-03 12:23:10,918 | INFO     | ready for new job
[2025-06-03 08:23:22] 2025-06-03 12:23:10,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:23:22] 2025-06-03 12:23:10,920 | INFO     | **************************************
[2025-06-03 08:23:22] 2025-06-03 12:23:10,920 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:23:22] 2025-06-03 12:23:10,920 | INFO     | **************************************
[2025-06-03 08:23:22] 2025-06-03 12:23:10,920 | INFO     | 
[2025-06-03 08:23:22] 2025-06-03 12:23:10,937 | INFO     | architecture information:
[2025-06-03 08:23:22] 2025-06-03 12:23:10,938 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:23:22] 2025-06-03 12:23:10,952 | INFO     | cat /etc/os-release:
[2025-06-03 08:23:22] NAME="CentOS Linux"
[2025-06-03 08:23:22] VERSION="7 (Core)"
[2025-06-03 08:23:22] ID="centos"
[2025-06-03 08:23:22] ID_LIKE="rhel fedora"
[2025-06-03 08:23:22] VERSION_ID="7"
[2025-06-03 08:23:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:23:22] ANSI_COLOR="0;31"
[2025-06-03 08:23:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:23:22] HOME_URL="https://www.centos.org/"
[2025-06-03 08:23:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:23:22] 
[2025-06-03 08:23:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:23:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:23:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:23:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:23:22] 
[2025-06-03 08:23:22] 2025-06-03 12:23:10,952 | INFO     | **************************************
[2025-06-03 08:23:22] 2025-06-03 12:23:11,409 | INFO     | PID=332012 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 08:23:22] 2025-06-03 12:23:11,411 | INFO     | .. there are 17 such processes running
[2025-06-03 08:23:22] 2025-06-03 12:23:11,455 | INFO     | executing command: df -mP /tmp/boinchome/slots/15
[2025-06-03 08:23:22] 2025-06-03 12:23:11,470 | INFO     | sufficient remaining disk space (165539741696 B)
[2025-06-03 08:23:22] 2025-06-03 12:23:11,470 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:23:22] 2025-06-03 12:23:11,470 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:23:22] 2025-06-03 12:23:11,470 | INFO     | update_server=False
[2025-06-03 08:23:22] 2025-06-03 12:23:11,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:23:22] 2025-06-03 12:23:11,470 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 08:23:22] 2025-06-03 12:23:11,471 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:23:22] 2025-06-03 12:23:11,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:23:22] 2025-06-03 12:23:11,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:23:22] 2025-06-03 12:23:11,720 | INFO     | all job control threads have been joined
[2025-06-03 08:23:22] 2025-06-03 12:23:12,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:23:22] 2025-06-03 12:23:12,086 | INFO     | all payload control threads have been joined
[2025-06-03 08:23:22] 2025-06-03 12:23:12,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:23:22] 2025-06-03 12:23:12,112 | INFO     | aborting loop
[2025-06-03 08:23:22] 2025-06-03 12:23:12,377 | INFO     | all data control threads have been joined
[2025-06-03 08:23:22] 2025-06-03 12:23:12,475 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:12,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:12,550 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:12,726 | INFO     | [job] control thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:12,809 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:12,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:23:22] 2025-06-03 12:23:13,061 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:13,087 | INFO     | [payload] control thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:13,118 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:13,159 | INFO     | [job] validate thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:13,366 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:13,382 | INFO     | [data] control thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:13,397 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:13,633 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:14,027 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:23:22] 2025-06-03 12:23:14,081 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:15,032 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:16,976 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:23:22] 2025-06-03 12:23:17,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410824521536)>', '<ExcThread(monitor, started 140410181637888)>']
[2025-06-03 08:23:22] 2025-06-03 12:23:17,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:23:22] 2025-06-03 12:23:17,500 | INFO     | [monitor] control thread has ended
[2025-06-03 08:23:22] 2025-06-03 12:23:22,054 | INFO     | all workflow threads have been joined
[2025-06-03 08:23:22] 2025-06-03 12:23:22,055 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:23:22] 2025-06-03 12:23:22,056 | INFO     | traces error code: 0
[2025-06-03 08:23:22] 2025-06-03 12:23:22,056 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:23:22] 2025-06-03 12:23:22,207 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:23:22] 2025-06-03 12:23:22,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:23:22] 2025-06-03 12:23:22,212 [wrapper] pilotpid: 332012
[2025-06-03 08:23:22] 2025-06-03 12:23:22,214 [wrapper] Pilot exit status: 0
[2025-06-03 08:23:22] 2025-06-03 12:23:22,223 [wrapper] pandaids: 6677495954
[2025-06-03 08:23:22] 2025-06-03 12:23:22,340 [wrapper] cleanup supervisor_pilot 1510250 332013
[2025-06-03 08:23:22] 2025-06-03 12:23:22,342 [wrapper] Test setup, not cleaning
[2025-06-03 08:23:22] 2025-06-03 12:23:22,345 [wrapper] apfmon messages muted
[2025-06-03 08:23:22] 2025-06-03 12:23:22,347 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:23:22] 2025-06-03 12:23:22,349 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:23:22]  *** Error codes and diagnostics ***
[2025-06-03 08:23:22]     "exeErrorCode": 0,
[2025-06-03 08:23:22]     "exeErrorDiag": "",
[2025-06-03 08:23:22]     "pilotErrorCode": 0,
[2025-06-03 08:23:22]     "pilotErrorDiag": "",
[2025-06-03 08:23:22]  *** Listing of results directory ***
[2025-06-03 08:23:22] total 385372
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 02:55 queuedata.json
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 02:55 pilot3.tar.gz
[2025-06-03 08:23:22] -rwx------. 1 boincer umatlas     37140 Jun  3 02:55 runpilot2-wrapper.sh
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas       100 Jun  3 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:23:22] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 07:37 run_atlas
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas       105 Jun  3 07:37 job.xml
[2025-06-03 08:23:22] -rw-r--r--. 2 boincer umatlas 213415101 Jun  3 07:37 EVNT.45006593._000924.pool.root.1
[2025-06-03 08:23:22] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 07:37 start_atlas.sh
[2025-06-03 08:23:22] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 07:37 shared
[2025-06-03 08:23:22] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 07:37 input.tar.gz
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas         0 Jun  3 07:37 boinc_lockfile
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 07:37 pandaJob.out
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas    982666 Jun  3 07:37 agis_schedconf.cvmfs.json
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas   1603667 Jun  3 07:37 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:23:22] drwx------. 4 boincer umatlas      4096 Jun  3 07:37 pilot3
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas        95 Jun  3 08:22 pilot_heartbeat.json
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas 176207106 Jun  3 08:22 HITS.45006595._023099.pool.root.1
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas       529 Jun  3 08:22 boinc_task_state.xml
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas      1028 Jun  3 08:22 memory_monitor_summary.json
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas      7163 Jun  3 08:22 init_data.xml
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas    289233 Jun  3 08:23 log.45006595._023099.job.log.tgz.1
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas      7684 Jun  3 08:23 heartbeat.json
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas        27 Jun  3 08:23 wrapper_checkpoint.txt
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 08:23 boinc_mmap_file
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas      4873 Jun  3 08:23 pilotlog.txt
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas    292161 Jun  3 08:23 log.45006595._023099.job.log.1
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas       357 Jun  3 08:23 output.list
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas       620 Jun  3 08:23 runtime_log
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas    604160 Jun  3 08:23 result.tar.gz
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas       649 Jun  3 08:23 UTwLDmAkag7n9Rq4apOajLDm4fhM0noT9bVof3QYDmWhXKDmeNufYm.diag
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas      8663 Jun  3 08:23 runtime_log.err
[2025-06-03 08:23:22] -rw-r--r--. 1 boincer umatlas     21504 Jun  3 08:23 stderr.txt
[2025-06-03 08:23:22] HITS file was successfully produced:
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas 176207106 Jun  3 08:22 shared/HITS.pool.root.1
[2025-06-03 08:23:22]  *** Contents of shared directory: ***
[2025-06-03 08:23:22] total 381608
[2025-06-03 08:23:22] -rw-r--r--. 2 boincer umatlas 213415101 Jun  3 07:37 ATLAS.root_0
[2025-06-03 08:23:22] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 07:37 start_atlas.sh
[2025-06-03 08:23:22] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 07:37 input.tar.gz
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas 176207106 Jun  3 08:22 HITS.pool.root.1
[2025-06-03 08:23:22] -rw-------. 1 boincer umatlas    604160 Jun  3 08:23 result.tar.gz
08:23:23 (325784): run_atlas exited; CPU time 17281.716656
08:23:23 (325784): called boinc_finish(0)

</stderr_txt>
]]>

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