Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:19:02 (2894): wrapper (7.7.26015): starting
22:19:02 (2894): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 22:19:02] Arguments: --nthreads 8
[2025-06-03 22:19:02] Threads: 8
[2025-06-03 22:19:02] Checking for CVMFS
[2025-06-03 22:19:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:19:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:19:02] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:19:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:19:04] 2.11.2.0 1205 32227 91168 146754 0 114 17410392 25165824 3210 130560 0 16243610 99.802 18096524 2181 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 22:19:04] CVMFS is ok
[2025-06-03 22:19:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:19:04] Checking for apptainer binary...
[2025-06-03 22:19:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:19:04] Running /usr/bin/apptainer --version
[2025-06-03 22:19:05] apptainer version 1.3.2-1.el7
[2025-06-03 22:19:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:19:07] cg-vwn325.simple-grid.lan
[2025-06-03 22:19:07] apptainer works
[2025-06-03 22:19:07] Set ATHENA_PROC_NUMBER=8
[2025-06-03 22:19:07] Set ATHENA_CORE_NUMBER=8
[2025-06-03 22:19:07] Starting ATLAS job with PandaID=6677547417
[2025-06-03 22:19:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:09:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:09:27] 2025-06-04 00:08:40,721 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:09:27] 2025-06-04 00:08:40,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:09:27] 2025-06-04 00:08:40,721 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:09:27] 2025-06-04 00:08:40,721 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:09:27] 2025-06-04 00:08:40,726 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:09:27] 2025-06-04 00:08:40,727 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,729 | INFO     | sum of deviations: 12263758542.000044
[2025-06-04 02:09:27] 2025-06-04 00:08:40,729 | INFO     | mean x: 1748988797.0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,743 | INFO     | mean y: 2480962.6995515693
[2025-06-04 02:09:27] 2025-06-04 00:08:40,743 | INFO     | -- intersect: -6235245685.868971
[2025-06-04 02:09:27] 2025-06-04 00:08:40,744 | INFO     | intersect: -6235245685.868971
[2025-06-04 02:09:27] 2025-06-04 00:08:40,744 | INFO     | chi2: 2.461410247615199
[2025-06-04 02:09:27] 2025-06-04 00:08:40,744 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 02:09:27] 2025-06-04 00:08:40,746 | INFO     | sum of deviations: 27373057894.000015
[2025-06-04 02:09:27] 2025-06-04 00:08:40,746 | INFO     | mean x: 1748988644.5
[2025-06-04 02:09:27] 2025-06-04 00:08:40,746 | INFO     | mean y: 2490965.651376147
[2025-06-04 02:09:27] 2025-06-04 00:08:40,746 | INFO     | -- intersect: -14900434844.893496
[2025-06-04 02:09:27] 2025-06-04 00:08:40,747 | INFO     | intersect: -14900434844.893496
[2025-06-04 02:09:27] 2025-06-04 00:08:40,747 | INFO     | chi2: 1.641800398632399
[2025-06-04 02:09:27] 2025-06-04 00:08:40,747 | INFO     | current chi2=1.641800398632399 (change=33.29838452476178 %)
[2025-06-04 02:09:27] 2025-06-04 00:08:40,747 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,749 | INFO     | sum of deviations: 27113466111.0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,749 | INFO     | mean x: 1748988492.0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,749 | INFO     | mean y: 2490782.765258216
[2025-06-04 02:09:27] 2025-06-04 00:08:40,749 | INFO     | -- intersect: -15823260291.831297
[2025-06-04 02:09:27] 2025-06-04 00:08:40,749 | INFO     | intersect: -15823260291.831297
[2025-06-04 02:09:27] 2025-06-04 00:08:40,750 | INFO     | chi2: 1.6424558420550415
[2025-06-04 02:09:27] 2025-06-04 00:08:40,750 | INFO     | current chi2=1.6424558420550415 (change=-0.03992223556459307 %)
[2025-06-04 02:09:27] 2025-06-04 00:08:40,750 | INFO     | right removable region: 212
[2025-06-04 02:09:27] 2025-06-04 00:08:40,750 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 02:09:27] 2025-06-04 00:08:40,752 | INFO     | sum of deviations: -26152989909.5
[2025-06-04 02:09:27] 2025-06-04 00:08:40,752 | INFO     | mean x: 1748988949.5
[2025-06-04 02:09:27] 2025-06-04 00:08:40,752 | INFO     | mean y: 2506678.9403669727
[2025-06-04 02:09:27] 2025-06-04 00:08:40,752 | INFO     | -- intersect: 14241183914.88169
[2025-06-04 02:09:27] 2025-06-04 00:08:40,752 | INFO     | intersect: 14241183914.88169
[2025-06-04 02:09:27] 2025-06-04 00:08:40,753 | INFO     | chi2: 0.9195638619275979
[2025-06-04 02:09:27] 2025-06-04 00:08:40,753 | INFO     | current chi2=0.9195638619275979 (change=62.64077218259162 %)
[2025-06-04 02:09:27] 2025-06-04 00:08:40,753 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,755 | INFO     | sum of deviations: -32904423885.0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,755 | INFO     | mean x: 1748989102.0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,755 | INFO     | mean y: 2511409.0704225353
[2025-06-04 02:09:27] 2025-06-04 00:08:40,755 | INFO     | -- intersect: 19208370266.96277
[2025-06-04 02:09:27] 2025-06-04 00:08:40,755 | INFO     | intersect: 19208370266.96277
[2025-06-04 02:09:27] 2025-06-04 00:08:40,756 | INFO     | chi2: 0.8583052250853231
[2025-06-04 02:09:27] 2025-06-04 00:08:40,756 | INFO     | current chi2=0.8583052250853231 (change=6.661705551788849 %)
[2025-06-04 02:09:27] 2025-06-04 00:08:40,756 | INFO     | left removable region: 20
[2025-06-04 02:09:27] 2025-06-04 00:08:40,756 | INFO     | sum of square deviations: 2194675568.0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,758 | INFO     | sum of deviations: -16962352838.000002
[2025-06-04 02:09:27] 2025-06-04 00:08:40,758 | INFO     | mean x: 1748989071.5
[2025-06-04 02:09:27] 2025-06-04 00:08:40,758 | INFO     | mean y: 2523667.9270833335
[2025-06-04 02:09:27] 2025-06-04 00:08:40,761 | INFO     | -- intersect: 13520225406.241152
[2025-06-04 02:09:27] 2025-06-04 00:08:40,761 | INFO     | intersect: 13520225406.241152
[2025-06-04 02:09:27] 2025-06-04 00:08:40,762 | INFO     | chi2: 0.013875091135312764
[2025-06-04 02:09:27] 2025-06-04 00:08:40,762 | INFO     | -- intersect: 13520225406.241152
[2025-06-04 02:09:27] 2025-06-04 00:08:40,762 | INFO     | current memory leak: -7.73 B/s (using 192 data points, chi2=0.01)
[2025-06-04 02:09:27] 2025-06-04 00:08:40,763 | INFO     | ..............................
[2025-06-04 02:09:27] 2025-06-04 00:08:40,763 | INFO     | . Timing measurements:
[2025-06-04 02:09:27] 2025-06-04 00:08:40,763 | INFO     | . get job = 0 s
[2025-06-04 02:09:27] 2025-06-04 00:08:40,763 | INFO     | . initial setup = 2 s
[2025-06-04 02:09:27] 2025-06-04 00:08:40,763 | INFO     | . payload setup = 14 s
[2025-06-04 02:09:27] 2025-06-04 00:08:40,764 | INFO     | . stage-in = 0 s
[2025-06-04 02:09:27] 2025-06-04 00:08:40,764 | INFO     | . payload execution = 13621 s
[2025-06-04 02:09:27] 2025-06-04 00:08:40,764 | INFO     | . stage-out = 5 s
[2025-06-04 02:09:27] 2025-06-04 00:08:40,764 | INFO     | . log creation = 1 s
[2025-06-04 02:09:27] 2025-06-04 00:08:40,764 | INFO     | ..............................
[2025-06-04 02:09:27] 2025-06-04 00:08:40,948 | INFO     | 
[2025-06-04 02:09:27] 2025-06-04 00:08:40,948 | INFO     | job summary report
[2025-06-04 02:09:27] 2025-06-04 00:08:40,948 | INFO     | --------------------------------------------------
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | PanDA job id: 6677547417
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | task id: 45006595
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | errors: (none)
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | pilot state: finished 
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | transexitcode: 0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | exeerrorcode: 0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | exeerrordiag: 
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | exitcode: 0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | exitmsg: OK
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | cpuconsumptiontime: 49914 s
[2025-06-04 02:09:27] 2025-06-04 00:08:40,949 | INFO     | nevents: 400
[2025-06-04 02:09:27] 2025-06-04 00:08:40,950 | INFO     | neventsw: 0
[2025-06-04 02:09:27] 2025-06-04 00:08:40,950 | INFO     | pid: 15107
[2025-06-04 02:09:27] 2025-06-04 00:08:40,950 | INFO     | pgrp: 15107
[2025-06-04 02:09:27] 2025-06-04 00:08:40,950 | INFO     | corecount: 8
[2025-06-04 02:09:27] 2025-06-04 00:08:40,950 | INFO     | event service: False
[2025-06-04 02:09:27] 2025-06-04 00:08:40,950 | INFO     | sizes: {0: 2404355, 1: 2405212, 2: 2405212, 9: 2405446, 12: 2405474, 13640: 2435261, 13645: 2444204, 13646: 2444260, 13731: 2444458}
[2025-06-04 02:09:27] 2025-06-04 00:08:40,950 | INFO     | --------------------------------------------------
[2025-06-04 02:09:27] 2025-06-04 00:08:40,950 | INFO     | 
[2025-06-04 02:09:27] 2025-06-04 00:08:40,950 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-04 02:09:27] 2025-06-04 00:08:41,672 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,672 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,672 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,672 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,672 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,672 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,673 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,674 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:09:27] 2025-06-04 00:08:41,674 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,674 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:09:27] 2025-06-04 00:08:41,674 | INFO     | job 6677547417 has completed (purged errors)
[2025-06-04 02:09:27] 2025-06-04 00:08:41,674 | INFO     | overall cleanup function is called
[2025-06-04 02:09:27] 2025-06-04 00:08:42,683 | INFO     | --- collectZombieJob: --- 10, [15107]
[2025-06-04 02:09:27] 2025-06-04 00:08:42,683 | INFO     | zombie collector waiting for pid 15107
[2025-06-04 02:09:27] 2025-06-04 00:08:42,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:09:27] 2025-06-04 00:08:42,684 | INFO     | collected zombie processes
[2025-06-04 02:09:27] 2025-06-04 00:08:42,684 | INFO     | will attempt to kill all subprocesses of pid=15107
[2025-06-04 02:09:27] 2025-06-04 00:08:42,794 | INFO     | process IDs to be killed: [15107] (in reverse order)
[2025-06-04 02:09:27] 2025-06-04 00:08:43,213 | INFO     | PID=6599 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 02:09:27] 2025-06-04 00:08:43,213 | INFO     | .. there are 9 such processes running
[2025-06-04 02:09:27] 2025-06-04 00:08:43,905 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:09:27] 2025-06-04 00:08:43,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:09:27] 2025-06-04 00:08:43,908 | INFO     | did not find any defunct processes belonging to 15107
[2025-06-04 02:09:27] 2025-06-04 00:08:43,911 | INFO     | did not find any defunct processes belonging to 15107
[2025-06-04 02:09:27] 2025-06-04 00:08:43,912 | INFO     | ready for new job
[2025-06-04 02:09:27] 2025-06-04 00:08:43,912 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:09:27] 2025-06-04 00:08:43,914 | INFO     | **************************************
[2025-06-04 02:09:27] 2025-06-04 00:08:43,914 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:09:27] 2025-06-04 00:08:43,914 | INFO     | **************************************
[2025-06-04 02:09:27] 2025-06-04 00:08:43,914 | INFO     | 
[2025-06-04 02:09:27] 2025-06-04 00:08:43,915 | INFO     | pilot is running in a VM
[2025-06-04 02:09:27] 2025-06-04 00:08:43,915 | INFO     | architecture information:
[2025-06-04 02:09:27] 2025-06-04 00:08:43,930 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:09:27] 2025-06-04 00:08:44,239 | INFO     | cat /etc/os-release:
[2025-06-04 02:09:27] NAME="CentOS Linux"
[2025-06-04 02:09:27] VERSION="7 (Core)"
[2025-06-04 02:09:27] ID="centos"
[2025-06-04 02:09:27] ID_LIKE="rhel fedora"
[2025-06-04 02:09:27] VERSION_ID="7"
[2025-06-04 02:09:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:09:27] ANSI_COLOR="0;31"
[2025-06-04 02:09:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:09:27] HOME_URL="https://www.centos.org/"
[2025-06-04 02:09:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:09:27] 
[2025-06-04 02:09:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:09:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:09:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:09:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:09:27] 
[2025-06-04 02:09:27] 2025-06-04 00:08:44,239 | INFO     | **************************************
[2025-06-04 02:09:27] 2025-06-04 00:08:44,741 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-04 02:09:27] 2025-06-04 00:08:44,972 | INFO     | sufficient remaining disk space (497399365632 B)
[2025-06-04 02:09:27] 2025-06-04 00:08:44,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:09:27] 2025-06-04 00:08:44,973 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:09:27] 2025-06-04 00:08:44,973 | INFO     | update_server=False
[2025-06-04 02:09:27] 2025-06-04 00:08:44,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:09:27] 2025-06-04 00:08:44,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:09:27] 2025-06-04 00:08:44,977 | INFO     | aborting loop
[2025-06-04 02:09:27] 2025-06-04 00:08:45,035 | INFO     | all data control threads have been joined
[2025-06-04 02:09:27] 2025-06-04 00:08:45,210 | INFO     | all job control threads have been joined
[2025-06-04 02:09:27] 2025-06-04 00:08:45,222 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:09:27] 2025-06-04 00:08:45,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:09:27] 2025-06-04 00:08:45,223 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:09:27] 2025-06-04 00:08:45,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:09:27] 2025-06-04 00:08:45,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:09:27] 2025-06-04 00:08:45,979 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:45,983 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:46,024 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:46,041 | INFO     | [data] control thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:46,216 | INFO     | [job] control thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:46,362 | INFO     | all payload control threads have been joined
[2025-06-04 02:09:27] 2025-06-04 00:08:46,795 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:46,892 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:46,964 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:46,979 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:47,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:09:27] 2025-06-04 00:08:47,072 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:47,075 | INFO     | [job] validate thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:47,216 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:47,368 | INFO     | [payload] control thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:47,385 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:47,882 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:51,043 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:09:27] 2025-06-04 00:08:52,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914634860352)>', '<ExcThread(monitor, started 139914062591744)>']
[2025-06-04 02:09:27] 2025-06-04 00:08:52,264 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:09:27] 2025-06-04 00:08:52,264 | INFO     | [monitor] control thread has ended
[2025-06-04 02:09:27] 2025-06-04 00:08:57,161 | INFO     | all workflow threads have been joined
[2025-06-04 02:09:27] 2025-06-04 00:08:57,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:09:27] 2025-06-04 00:08:57,162 | INFO     | traces error code: 0
[2025-06-04 02:09:27] 2025-06-04 00:08:57,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:09:27] 2025-06-04 00:08:57,424 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:09:27] 2025-06-04 00:08:57,469 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:09:27] 2025-06-04 00:08:57,491 [wrapper] pilotpid: 6599
[2025-06-04 02:09:27] 2025-06-04 00:08:57,513 [wrapper] Pilot exit status: 0
[2025-06-04 02:09:27] 2025-06-04 00:08:57,792 [wrapper] pandaids: 6677547417
[2025-06-04 02:09:27] 2025-06-04 00:08:58,018 [wrapper] cleanup supervisor_pilot  1060 6600
[2025-06-04 02:09:27] 2025-06-04 00:08:58,090 [wrapper] Test setup, not cleaning
[2025-06-04 02:09:27] 2025-06-04 00:08:58,119 [wrapper] apfmon messages muted
[2025-06-04 02:09:27] 2025-06-04 00:08:58,150 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:09:27] 2025-06-04 00:08:58,176 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:09:27]  *** Error codes and diagnostics ***
[2025-06-04 02:09:27]     "exeErrorCode": 0,
[2025-06-04 02:09:27]     "exeErrorDiag": "",
[2025-06-04 02:09:27]     "pilotErrorCode": 0,
[2025-06-04 02:09:27]     "pilotErrorDiag": "",
[2025-06-04 02:09:27]  *** Listing of results directory ***
[2025-06-04 02:09:27] total 391752
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc    495897 Jun  3 10:43 pilot3.tar.gz
[2025-06-04 02:09:27] -rwx------. 1 boinc boinc     37140 Jun  3 10:53 runpilot2-wrapper.sh
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc      5111 Jun  3 10:53 queuedata.json
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc       100 Jun  3 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:09:27] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 22:19 run_atlas
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc       105 Jun  3 22:19 job.xml
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc      6392 Jun  3 22:19 init_data.xml
[2025-06-04 02:09:27] -rw-r--r--. 2 boinc boinc 217064777 Jun  3 22:19 EVNT.45006593._001043.pool.root.1
[2025-06-04 02:09:27] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:19 start_atlas.sh
[2025-06-04 02:09:27] drwxrwx--x. 2 boinc boinc        68 Jun  3 22:19 shared
[2025-06-04 02:09:27] -rw-r--r--. 2 boinc boinc    508876 Jun  3 22:19 input.tar.gz
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc         0 Jun  3 22:19 boinc_lockfile
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc      2525 Jun  3 22:19 pandaJob.out
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc    986893 Jun  3 22:19 agis_schedconf.cvmfs.json
[2025-06-04 02:09:27] drwx------. 4 boinc boinc      4096 Jun  3 22:19 pilot3
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc 177127129 Jun  4 02:05 HITS.45006595._026071.pool.root.1
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc       531 Jun  4 02:06 boinc_task_state.xml
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc      1022 Jun  4 02:07 memory_monitor_summary.json
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc   1603667 Jun  4 02:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc    371295 Jun  4 02:07 log.45006595._026071.job.log.tgz.1
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc        95 Jun  4 02:07 pilot_heartbeat.json
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc      7698 Jun  4 02:08 heartbeat.json
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc      4417 Jun  4 02:08 pilotlog.txt
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc   1196524 Jun  4 02:08 log.45006595._026071.job.log.1
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc       357 Jun  4 02:08 output.list
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc       620 Jun  4 02:08 runtime_log
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc   1587200 Jun  4 02:08 result.tar.gz
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc       657 Jun  4 02:09 SQ1LDmHacg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmP1XKDmwQVYhm.diag
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc      8673 Jun  4 02:09 runtime_log.err
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc      8192 Jun  4 02:09 boinc_mmap_file
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc        28 Jun  4 02:09 wrapper_checkpoint.txt
[2025-06-04 02:09:27] -rw-r--r--. 1 boinc boinc     20559 Jun  4 02:09 stderr.txt
[2025-06-04 02:09:27] HITS file was successfully produced:
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc 177127129 Jun  4 02:05 shared/HITS.pool.root.1
[2025-06-04 02:09:27]  *** Contents of shared directory: ***
[2025-06-04 02:09:27] total 387024
[2025-06-04 02:09:27] -rw-r--r--. 2 boinc boinc 217064777 Jun  3 22:19 ATLAS.root_0
[2025-06-04 02:09:27] -rw-r--r--. 2 boinc boinc     15093 Jun  3 22:19 start_atlas.sh
[2025-06-04 02:09:27] -rw-r--r--. 2 boinc boinc    508876 Jun  3 22:19 input.tar.gz
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc 177127129 Jun  4 02:05 HITS.pool.root.1
[2025-06-04 02:09:27] -rw-------. 1 boinc boinc   1587200 Jun  4 02:08 result.tar.gz
02:09:29 (2894): run_atlas exited; CPU time 50082.971350
02:09:29 (2894): called boinc_finish(0)

</stderr_txt>
]]>

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