Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:23:04 (3910149): wrapper (7.7.26015): starting
07:23:04 (3910149): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:23:04] Arguments: --nthreads 8
[2025-06-03 07:23:04] Threads: 8
[2025-06-03 07:23:04] Checking for CVMFS
[2025-06-03 07:23:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:23:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:23:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:23:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:23:05] 2.12.6.0 2097083 99497 850504 146741 0 64 19393576 21042177 3536 130560 3 166713944 99.312 304848815 23288 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 07:23:05] CVMFS is ok
[2025-06-03 07:23:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 07:23:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 07:23:05] Further information can be found at the LHC@home message board.
[2025-06-03 07:23:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:23:05] Checking for apptainer binary...
[2025-06-03 07:23:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:23:05] Running /usr/bin/apptainer --version
[2025-06-03 07:23:05] apptainer version 1.4.1-1.el9
[2025-06-03 07:23:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:23:05] c-16-16.aglt2.org
[2025-06-03 07:23:05] apptainer works
[2025-06-03 07:23:05] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:23:05] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:23:05] Starting ATLAS job with PandaID=6677546827
[2025-06-03 07:23:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:29:42]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:29:42] 2025-06-03 13:29:29,424 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:29:42] 2025-06-03 13:29:29,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:29:42] 2025-06-03 13:29:29,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:29:42] 2025-06-03 13:29:29,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:29:42] 2025-06-03 13:29:29,430 | INFO     | fitting pss+swap vs Time
[2025-06-03 09:29:42] 2025-06-03 13:29:29,430 | INFO     | sum of square deviations: 591173875.0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,431 | INFO     | sum of deviations: 2492172842.499995
[2025-06-03 09:29:42] 2025-06-03 13:29:29,431 | INFO     | mean x: 1748953574.5
[2025-06-03 09:29:42] 2025-06-03 13:29:29,431 | INFO     | mean y: 2188650.2016129033
[2025-06-03 09:29:42] 2025-06-03 13:29:29,432 | INFO     | -- intersect: -7370759961.849608
[2025-06-03 09:29:42] 2025-06-03 13:29:29,432 | INFO     | intersect: -7370759961.849608
[2025-06-03 09:29:42] 2025-06-03 13:29:29,432 | INFO     | chi2: 3.9425501297834233
[2025-06-03 09:29:42] 2025-06-03 13:29:29,432 | INFO     | sum of square deviations: 522502820.0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,433 | INFO     | sum of deviations: 3214721411.000005
[2025-06-03 09:29:42] 2025-06-03 13:29:29,433 | INFO     | mean x: 1748953422.0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,434 | INFO     | mean y: 2190233.731092437
[2025-06-03 09:29:42] 2025-06-03 13:29:29,434 | INFO     | -- intersect: -10758322049.332043
[2025-06-03 09:29:42] 2025-06-03 13:29:29,434 | INFO     | intersect: -10758322049.332043
[2025-06-03 09:29:42] 2025-06-03 13:29:29,435 | INFO     | chi2: 3.946646966890183
[2025-06-03 09:29:42] 2025-06-03 13:29:29,435 | INFO     | current chi2=3.946646966890183 (change=-0.10391338022085257 %)
[2025-06-03 09:29:42] 2025-06-03 13:29:29,435 | INFO     | right removable region: 118
[2025-06-03 09:29:42] 2025-06-03 13:29:29,435 | INFO     | sum of square deviations: 522502820.0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,436 | INFO     | sum of deviations: -21853029241.000004
[2025-06-03 09:29:42] 2025-06-03 13:29:29,436 | INFO     | mean x: 1748953727.0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,436 | INFO     | mean y: 2242379.1092436975
[2025-06-03 09:29:42] 2025-06-03 13:29:29,436 | INFO     | -- intersect: 73150052255.59361
[2025-06-03 09:29:42] 2025-06-03 13:29:29,437 | INFO     | intersect: 73150052255.59361
[2025-06-03 09:29:42] 2025-06-03 13:29:29,437 | INFO     | chi2: 1.4848014019901028
[2025-06-03 09:29:42] 2025-06-03 13:29:29,437 | INFO     | current chi2=1.4848014019901028 (change=62.33906093486583 %)
[2025-06-03 09:29:42] 2025-06-03 13:29:29,438 | INFO     | sum of square deviations: 459366752.5
[2025-06-03 09:29:42] 2025-06-03 13:29:29,438 | INFO     | sum of deviations: -36790377401.00001
[2025-06-03 09:29:42] 2025-06-03 13:29:29,439 | INFO     | mean x: 1748953879.5
[2025-06-03 09:29:42] 2025-06-03 13:29:29,439 | INFO     | mean y: 2278299.456140351
[2025-06-03 09:29:42] 2025-06-03 13:29:29,439 | INFO     | -- intersect: 140074830206.11182
[2025-06-03 09:29:42] 2025-06-03 13:29:29,439 | INFO     | intersect: 140074830206.11182
[2025-06-03 09:29:42] 2025-06-03 13:29:29,439 | INFO     | chi2: 0.4511240128658082
[2025-06-03 09:29:42] 2025-06-03 13:29:29,440 | INFO     | current chi2=0.4511240128658082 (change=69.61721532178245 %)
[2025-06-03 09:29:42] 2025-06-03 13:29:29,440 | INFO     | sum of square deviations: 401533110.0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,441 | INFO     | sum of deviations: -35984485966.0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,441 | INFO     | mean x: 1748954032.0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,441 | INFO     | mean y: 2275992.0733944955
[2025-06-03 09:29:42] 2025-06-03 13:29:29,441 | INFO     | -- intersect: 156739566771.61362
[2025-06-03 09:29:42] 2025-06-03 13:29:29,441 | INFO     | intersect: 156739566771.61362
[2025-06-03 09:29:42] 2025-06-03 13:29:29,442 | INFO     | chi2: 0.385953258073303
[2025-06-03 09:29:42] 2025-06-03 13:29:29,442 | INFO     | current chi2=0.385953258073303 (change=14.44630587906456 %)
[2025-06-03 09:29:42] 2025-06-03 13:29:29,442 | INFO     | left removable region: 30
[2025-06-03 09:29:42] 2025-06-03 13:29:29,442 | INFO     | sum of square deviations: 211285822.0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,443 | INFO     | sum of deviations: -21374273882.5
[2025-06-03 09:29:42] 2025-06-03 13:29:29,443 | INFO     | mean x: 1748954306.5
[2025-06-03 09:29:42] 2025-06-03 13:29:29,443 | INFO     | mean y: 2237937.6704545454
[2025-06-03 09:29:42] 2025-06-03 13:29:29,443 | INFO     | -- intersect: 176931423252.85382
[2025-06-03 09:29:42] 2025-06-03 13:29:29,443 | INFO     | intersect: 176931423252.85382
[2025-06-03 09:29:42] 2025-06-03 13:29:29,444 | INFO     | chi2: 0.3335177157337214
[2025-06-03 09:29:42] 2025-06-03 13:29:29,444 | INFO     | -- intersect: 176931423252.85382
[2025-06-03 09:29:42] 2025-06-03 13:29:29,444 | INFO     | current memory leak: -101.16 B/s (using 88 data points, chi2=0.33)
[2025-06-03 09:29:42] 2025-06-03 13:29:29,445 | INFO     | ..............................
[2025-06-03 09:29:42] 2025-06-03 13:29:29,445 | INFO     | . Timing measurements:
[2025-06-03 09:29:42] 2025-06-03 13:29:29,445 | INFO     | . get job = 0 s
[2025-06-03 09:29:42] 2025-06-03 13:29:29,445 | INFO     | . initial setup = 2 s
[2025-06-03 09:29:42] 2025-06-03 13:29:29,445 | INFO     | . payload setup = 6 s
[2025-06-03 09:29:42] 2025-06-03 13:29:29,445 | INFO     | . stage-in = 0 s
[2025-06-03 09:29:42] 2025-06-03 13:29:29,446 | INFO     | . payload execution = 7540 s
[2025-06-03 09:29:42] 2025-06-03 13:29:29,446 | INFO     | . stage-out = 1 s
[2025-06-03 09:29:42] 2025-06-03 13:29:29,446 | INFO     | . log creation = 0 s
[2025-06-03 09:29:42] 2025-06-03 13:29:29,446 | INFO     | ..............................
[2025-06-03 09:29:42] 2025-06-03 13:29:29,605 | INFO     | 
[2025-06-03 09:29:42] 2025-06-03 13:29:29,606 | INFO     | job summary report
[2025-06-03 09:29:42] 2025-06-03 13:29:29,606 | INFO     | --------------------------------------------------
[2025-06-03 09:29:42] 2025-06-03 13:29:29,606 | INFO     | PanDA job id: 6677546827
[2025-06-03 09:29:42] 2025-06-03 13:29:29,606 | INFO     | task id: 45006595
[2025-06-03 09:29:42] 2025-06-03 13:29:29,606 | INFO     | errors: (none)
[2025-06-03 09:29:42] 2025-06-03 13:29:29,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:29:42] 2025-06-03 13:29:29,606 | INFO     | pilot state: finished 
[2025-06-03 09:29:42] 2025-06-03 13:29:29,607 | INFO     | transexitcode: 0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,607 | INFO     | exeerrorcode: 0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,607 | INFO     | exeerrordiag: 
[2025-06-03 09:29:42] 2025-06-03 13:29:29,607 | INFO     | exitcode: 0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,607 | INFO     | exitmsg: OK
[2025-06-03 09:29:42] 2025-06-03 13:29:29,607 | INFO     | cpuconsumptiontime: 53708 s
[2025-06-03 09:29:42] 2025-06-03 13:29:29,608 | INFO     | nevents: 400
[2025-06-03 09:29:42] 2025-06-03 13:29:29,608 | INFO     | neventsw: 0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,608 | INFO     | pid: 3920785
[2025-06-03 09:29:42] 2025-06-03 13:29:29,608 | INFO     | pgrp: 3920785
[2025-06-03 09:29:42] 2025-06-03 13:29:29,608 | INFO     | corecount: 8
[2025-06-03 09:29:42] 2025-06-03 13:29:29,608 | INFO     | event service: False
[2025-06-03 09:29:42] 2025-06-03 13:29:29,608 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 12: 2405446, 7550: 2432592, 7553: 2441717, 7557: 2441831}
[2025-06-03 09:29:42] 2025-06-03 13:29:29,609 | INFO     | --------------------------------------------------
[2025-06-03 09:29:42] 2025-06-03 13:29:29,609 | INFO     | 
[2025-06-03 09:29:42] 2025-06-03 13:29:29,609 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 09:29:42] 2025-06-03 13:29:29,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,627 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:29:42] 2025-06-03 13:29:29,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:29:42] 2025-06-03 13:29:29,631 | INFO     | job 6677546827 has completed (purged errors)
[2025-06-03 09:29:42] 2025-06-03 13:29:29,631 | INFO     | overall cleanup function is called
[2025-06-03 09:29:42] 2025-06-03 13:29:30,639 | INFO     | --- collectZombieJob: --- 10, [3920785]
[2025-06-03 09:29:42] 2025-06-03 13:29:30,639 | INFO     | zombie collector waiting for pid 3920785
[2025-06-03 09:29:42] 2025-06-03 13:29:30,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:29:42] 2025-06-03 13:29:30,639 | INFO     | collected zombie processes
[2025-06-03 09:29:42] 2025-06-03 13:29:30,639 | INFO     | will attempt to kill all subprocesses of pid=3920785
[2025-06-03 09:29:42] 2025-06-03 13:29:31,064 | INFO     | process IDs to be killed: [3920785] (in reverse order)
[2025-06-03 09:29:42] 2025-06-03 13:29:31,170 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:29:42] 2025-06-03 13:29:31,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:29:42] 2025-06-03 13:29:31,187 | INFO     | did not find any defunct processes belonging to 3920785
[2025-06-03 09:29:42] 2025-06-03 13:29:31,203 | INFO     | did not find any defunct processes belonging to 3920785
[2025-06-03 09:29:42] 2025-06-03 13:29:31,203 | INFO     | ready for new job
[2025-06-03 09:29:42] 2025-06-03 13:29:31,203 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:29:42] 2025-06-03 13:29:31,206 | INFO     | **************************************
[2025-06-03 09:29:42] 2025-06-03 13:29:31,206 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:29:42] 2025-06-03 13:29:31,207 | INFO     | **************************************
[2025-06-03 09:29:42] 2025-06-03 13:29:31,207 | INFO     | 
[2025-06-03 09:29:42] 2025-06-03 13:29:31,221 | INFO     | architecture information:
[2025-06-03 09:29:42] 2025-06-03 13:29:31,221 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:29:42] 2025-06-03 13:29:31,236 | INFO     | cat /etc/os-release:
[2025-06-03 09:29:42] NAME="CentOS Linux"
[2025-06-03 09:29:42] VERSION="7 (Core)"
[2025-06-03 09:29:42] ID="centos"
[2025-06-03 09:29:42] ID_LIKE="rhel fedora"
[2025-06-03 09:29:42] VERSION_ID="7"
[2025-06-03 09:29:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:29:42] ANSI_COLOR="0;31"
[2025-06-03 09:29:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:29:42] HOME_URL="https://www.centos.org/"
[2025-06-03 09:29:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:29:42] 
[2025-06-03 09:29:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:29:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:29:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:29:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:29:42] 
[2025-06-03 09:29:42] 2025-06-03 13:29:31,236 | INFO     | **************************************
[2025-06-03 09:29:42] 2025-06-03 13:29:31,739 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 09:29:42] 2025-06-03 13:29:31,755 | INFO     | sufficient remaining disk space (51931774976 B)
[2025-06-03 09:29:42] 2025-06-03 13:29:31,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:29:42] 2025-06-03 13:29:31,756 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:29:42] 2025-06-03 13:29:31,756 | INFO     | update_server=False
[2025-06-03 09:29:42] 2025-06-03 13:29:31,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:29:42] 2025-06-03 13:29:31,756 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 09:29:42] 2025-06-03 13:29:31,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:29:42] 2025-06-03 13:29:31,757 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:29:42] 2025-06-03 13:29:31,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:29:42] 2025-06-03 13:29:31,758 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:29:42] 2025-06-03 13:29:31,765 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 09:29:42] 2025-06-03 13:29:31,765 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 09:29:42] 2025-06-03 13:29:31,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:29:42] 2025-06-03 13:29:31,766 | INFO     | will abort loop
[2025-06-03 09:29:42] 2025-06-03 13:29:31,933 | INFO     | all data control threads have been joined
[2025-06-03 09:29:42] 2025-06-03 13:29:32,762 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:32,771 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:32,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:29:42] 2025-06-03 13:29:32,939 | INFO     | [data] control thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:33,029 | INFO     | all job control threads have been joined
[2025-06-03 09:29:42] 2025-06-03 13:29:33,099 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:33,235 | INFO     | all payload control threads have been joined
[2025-06-03 09:29:42] 2025-06-03 13:29:33,318 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:33,448 | INFO     | [job] validate thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:33,710 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:33,726 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:33,813 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:33,946 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:34,034 | INFO     | [job] control thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:34,239 | INFO     | [payload] control thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:34,245 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:34,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:29:42] 2025-06-03 13:29:34,815 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:35,616 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:35,763 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:29:42] 2025-06-03 13:29:37,634 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140396320286528)>', '<ExcThread(monitor, started 140395677730560)>']
[2025-06-03 09:29:42] 2025-06-03 13:29:37,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:29:42] 2025-06-03 13:29:37,786 | INFO     | [monitor] control thread has ended
[2025-06-03 09:29:42] 2025-06-03 13:29:42,635 | INFO     | all workflow threads have been joined
[2025-06-03 09:29:42] 2025-06-03 13:29:42,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:29:42] 2025-06-03 13:29:42,635 | INFO     | traces error code: 0
[2025-06-03 09:29:42] 2025-06-03 13:29:42,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:29:42] 2025-06-03 13:29:42,765 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:29:42] 2025-06-03 13:29:42,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:29:42] 2025-06-03 13:29:42,770 [wrapper] pilotpid: 3913734
[2025-06-03 09:29:42] 2025-06-03 13:29:42,773 [wrapper] Pilot exit status: 0
[2025-06-03 09:29:42] 2025-06-03 13:29:42,783 [wrapper] pandaids: 6677546827
[2025-06-03 09:29:42] 2025-06-03 13:29:42,850 [wrapper] cleanup supervisor_pilot   16529 3913735
[2025-06-03 09:29:42] 2025-06-03 13:29:42,853 [wrapper] Test setup, not cleaning
[2025-06-03 09:29:42] 2025-06-03 13:29:42,855 [wrapper] apfmon messages muted
[2025-06-03 09:29:42] 2025-06-03 13:29:42,857 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:29:42] 2025-06-03 13:29:42,860 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:29:42]  *** Error codes and diagnostics ***
[2025-06-03 09:29:42]     "exeErrorCode": 0,
[2025-06-03 09:29:42]     "exeErrorDiag": "",
[2025-06-03 09:29:42]     "pilotErrorCode": 0,
[2025-06-03 09:29:42]     "pilotErrorDiag": "",
[2025-06-03 09:29:42]  *** Listing of results directory ***
[2025-06-03 09:29:42] total 393280
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 04:43 pilot3.tar.gz
[2025-06-03 09:29:42] -rwx------. 1 boincer umatlas     37140 Jun  3 04:47 runpilot2-wrapper.sh
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 04:47 queuedata.json
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas       100 Jun  3 07:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:29:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 07:23 run_atlas
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas       105 Jun  3 07:23 job.xml
[2025-06-03 09:29:42] -rw-r--r--. 2 boincer umatlas 217402373 Jun  3 07:23 EVNT.45006593._001037.pool.root.1
[2025-06-03 09:29:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 07:23 start_atlas.sh
[2025-06-03 09:29:42] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 07:23 shared
[2025-06-03 09:29:42] -rw-r--r--. 2 boincer umatlas    508872 Jun  3 07:23 input.tar.gz
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas         0 Jun  3 07:23 boinc_lockfile
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 07:23 pandaJob.out
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas    982666 Jun  3 07:23 agis_schedconf.cvmfs.json
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas   1603667 Jun  3 07:23 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:29:42] drwx------. 4 boincer umatlas      4096 Jun  3 07:23 pilot3
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas 179394966 Jun  3 09:28 HITS.45006595._025930.pool.root.1
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas       529 Jun  3 09:28 boinc_task_state.xml
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas      1034 Jun  3 09:29 memory_monitor_summary.json
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas        95 Jun  3 09:29 pilot_heartbeat.json
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas    334984 Jun  3 09:29 log.45006595._025930.job.log.tgz.1
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas      7712 Jun  3 09:29 heartbeat.json
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas      6522 Jun  3 09:29 init_data.xml
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 09:29 boinc_mmap_file
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas        27 Jun  3 09:29 wrapper_checkpoint.txt
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas      4662 Jun  3 09:29 pilotlog.txt
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas    713284 Jun  3 09:29 log.45006595._025930.job.log.1
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas       357 Jun  3 09:29 output.list
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas       620 Jun  3 09:29 runtime_log
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas   1064960 Jun  3 09:29 result.tar.gz
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas      8654 Jun  3 09:29 runtime_log.err
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas       651 Jun  3 09:29 i5RNDmtTcg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6zXKDm55Fjfm.diag
[2025-06-03 09:29:42] -rw-r--r--. 1 boincer umatlas     20818 Jun  3 09:29 stderr.txt
[2025-06-03 09:29:42] HITS file was successfully produced:
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas 179394966 Jun  3 09:28 shared/HITS.pool.root.1
[2025-06-03 09:29:42]  *** Contents of shared directory: ***
[2025-06-03 09:29:42] total 389060
[2025-06-03 09:29:42] -rw-r--r--. 2 boincer umatlas 217402373 Jun  3 07:23 ATLAS.root_0
[2025-06-03 09:29:42] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 07:23 start_atlas.sh
[2025-06-03 09:29:42] -rw-r--r--. 2 boincer umatlas    508872 Jun  3 07:23 input.tar.gz
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas 179394966 Jun  3 09:28 HITS.pool.root.1
[2025-06-03 09:29:42] -rw-------. 1 boincer umatlas   1064960 Jun  3 09:29 result.tar.gz
09:29:44 (3910149): run_atlas exited; CPU time 54058.591604
09:29:44 (3910149): called boinc_finish(0)

</stderr_txt>
]]>

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