Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:44:36 (803630): wrapper (7.7.26015): starting
03:44:36 (803630): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 03:44:36] Arguments: --nthreads 4
[2025-06-05 03:44:36] Threads: 4
[2025-06-05 03:44:36] Checking for CVMFS
[2025-06-05 03:44:36] No cvmfs_config command found, will try listing directly
[2025-06-05 03:44:36] CVMFS is ok
[2025-06-05 03:44:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 03:44:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 03:44:36] Further information can be found at the LHC@home message board.
[2025-06-05 03:44:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 03:44:36] Checking for apptainer binary...
[2025-06-05 03:44:36] which: no apptainer in ((null))
[2025-06-05 03:44:36] apptainer is not installed, using version from CVMFS
[2025-06-05 03:44:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 03:44:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-06-05 03:44:36] apptainer works
[2025-06-05 03:44:36] Set ATHENA_PROC_NUMBER=4
[2025-06-05 03:44:36] Set ATHENA_CORE_NUMBER=4
[2025-06-05 03:44:36] Starting ATLAS job with PandaID=6677400976
[2025-06-05 03:44:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 06:21:17]  *** The last 200 lines of the pilot log: ***
[2025-06-05 06:21:17] 2025-06-05 04:19:34,916 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6677400976/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 06:21:17] 2025-06-05 04:19:35,469 | INFO     | number of running child processes to parent process 814889: 1
[2025-06-05 06:21:17] 2025-06-05 04:19:35,470 | INFO     | maximum number of monitored processes: 6
[2025-06-05 06:21:17] 2025-06-05 04:19:35,835 | INFO     | PID=807302 has CPU usage=16.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 06:21:17] 2025-06-05 04:19:35,835 | INFO     | .. there are 8 such processes running
[2025-06-05 06:21:17] 2025-06-05 04:19:37,973 | INFO     | monitor loop #676: job 0:6677400976 is in state 'finished'
[2025-06-05 06:21:17] 2025-06-05 04:19:37,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 06:21:17] 2025-06-05 04:19:38,836 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 06:21:17] 2025-06-05 04:19:38,836 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6677400976/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 06:21:17] 2025-06-05 04:19:38,837 | INFO     | extracted standard info from prmon json
[2025-06-05 06:21:17] 2025-06-05 04:19:38,837 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 06:21:17] 2025-06-05 04:19:38,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 06:21:17] 2025-06-05 04:19:38,837 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 06:21:17] 2025-06-05 04:19:38,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 06:21:17] 2025-06-05 04:19:38,841 | INFO     | fitting pss+swap vs Time
[2025-06-05 06:21:17] 2025-06-05 04:19:38,841 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,842 | INFO     | sum of deviations: 11903616615.999992
[2025-06-05 06:21:17] 2025-06-05 04:19:38,842 | INFO     | mean x: 1749092519.5
[2025-06-05 06:21:17] 2025-06-05 04:19:38,842 | INFO     | mean y: 2312727.763157895
[2025-06-05 06:21:17] 2025-06-05 04:19:38,843 | INFO     | -- intersect: -19118278779.936016
[2025-06-05 06:21:17] 2025-06-05 04:19:38,843 | INFO     | intersect: -19118278779.936016
[2025-06-05 06:21:17] 2025-06-05 04:19:38,843 | INFO     | chi2: 1.6893405914028572
[2025-06-05 06:21:17] 2025-06-05 04:19:38,843 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,844 | INFO     | sum of deviations: 11340422952.999998
[2025-06-05 06:21:17] 2025-06-05 04:19:38,844 | INFO     | mean x: 1749092367.0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,844 | INFO     | mean y: 2311901.4081632653
[2025-06-05 06:21:17] 2025-06-05 04:19:38,844 | INFO     | -- intersect: -20136398975.544353
[2025-06-05 06:21:17] 2025-06-05 04:19:38,844 | INFO     | intersect: -20136398975.544353
[2025-06-05 06:21:17] 2025-06-05 04:19:38,845 | INFO     | chi2: 1.6911053203406543
[2025-06-05 06:21:17] 2025-06-05 04:19:38,845 | INFO     | current chi2=1.6911053203406543 (change=-0.10446259012409392 %)
[2025-06-05 06:21:17] 2025-06-05 04:19:38,845 | INFO     | right removable region: 146
[2025-06-05 06:21:17] 2025-06-05 04:19:38,845 | INFO     | sum of square deviations: 984941258.0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,846 | INFO     | sum of deviations: -11459332082.999996
[2025-06-05 06:21:17] 2025-06-05 04:19:38,846 | INFO     | mean x: 1749092672.0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,846 | INFO     | mean y: 2346523.761904762
[2025-06-05 06:21:17] 2025-06-05 04:19:38,846 | INFO     | -- intersect: 20352223848.516827
[2025-06-05 06:21:17] 2025-06-05 04:19:38,847 | INFO     | intersect: 20352223848.516827
[2025-06-05 06:21:17] 2025-06-05 04:19:38,847 | INFO     | chi2: 0.07826568106756501
[2025-06-05 06:21:17] 2025-06-05 04:19:38,847 | INFO     | current chi2=0.07826568106756501 (change=95.36708692931057 %)
[2025-06-05 06:21:17] 2025-06-05 04:19:38,847 | INFO     | sum of square deviations: 887813855.5
[2025-06-05 06:21:17] 2025-06-05 04:19:38,848 | INFO     | sum of deviations: -8902184785.499998
[2025-06-05 06:21:17] 2025-06-05 04:19:38,848 | INFO     | mean x: 1749092824.5
[2025-06-05 06:21:17] 2025-06-05 04:19:38,848 | INFO     | mean y: 2342476.88028169
[2025-06-05 06:21:17] 2025-06-05 04:19:38,848 | INFO     | -- intersect: 17540644491.68942
[2025-06-05 06:21:17] 2025-06-05 04:19:38,849 | INFO     | intersect: 17540644491.68942
[2025-06-05 06:21:17] 2025-06-05 04:19:38,849 | INFO     | chi2: 0.07142927718857332
[2025-06-05 06:21:17] 2025-06-05 04:19:38,849 | INFO     | current chi2=0.07142927718857332 (change=8.734867934120416 %)
[2025-06-05 06:21:17] 2025-06-05 04:19:38,849 | INFO     | left removable region: 20
[2025-06-05 06:21:17] 2025-06-05 04:19:38,849 | INFO     | sum of square deviations: 620244187.5
[2025-06-05 06:21:17] 2025-06-05 04:19:38,850 | INFO     | sum of deviations: -1855396251.9999995
[2025-06-05 06:21:17] 2025-06-05 04:19:38,850 | INFO     | mean x: 1749092946.5
[2025-06-05 06:21:17] 2025-06-05 04:19:38,850 | INFO     | mean y: 2329510.1746031744
[2025-06-05 06:21:17] 2025-06-05 04:19:38,850 | INFO     | -- intersect: 5234559916.7444935
[2025-06-05 06:21:17] 2025-06-05 04:19:38,850 | INFO     | intersect: 5234559916.7444935
[2025-06-05 06:21:17] 2025-06-05 04:19:38,851 | INFO     | chi2: 0.03401128825613825
[2025-06-05 06:21:17] 2025-06-05 04:19:38,851 | INFO     | -- intersect: 5234559916.7444935
[2025-06-05 06:21:17] 2025-06-05 04:19:38,851 | INFO     | current memory leak: -2.99 B/s (using 126 data points, chi2=0.03)
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | ..............................
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | . Timing measurements:
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | . get job = 0 s
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | . initial setup = 1 s
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | . payload setup = 6 s
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | . stage-in = 0 s
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | . payload execution = 9263 s
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | . stage-out = 0 s
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | . log creation = 0 s
[2025-06-05 06:21:17] 2025-06-05 04:19:38,852 | INFO     | ..............................
[2025-06-05 06:21:17] 2025-06-05 04:19:38,958 | INFO     | 
[2025-06-05 06:21:17] 2025-06-05 04:19:38,958 | INFO     | job summary report
[2025-06-05 06:21:17] 2025-06-05 04:19:38,958 | INFO     | --------------------------------------------------
[2025-06-05 06:21:17] 2025-06-05 04:19:38,958 | INFO     | PanDA job id: 6677400976
[2025-06-05 06:21:17] 2025-06-05 04:19:38,958 | INFO     | task id: 45006595
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | errors: (none)
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | pilot state: finished 
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | transexitcode: 0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | exeerrorcode: 0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | exeerrordiag: 
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | exitcode: 0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | exitmsg: OK
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | cpuconsumptiontime: 35440 s
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | nevents: 400
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | neventsw: 0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | pid: 814889
[2025-06-05 06:21:17] 2025-06-05 04:19:38,959 | INFO     | pgrp: 814889
[2025-06-05 06:21:17] 2025-06-05 04:19:38,960 | INFO     | corecount: 4
[2025-06-05 06:21:17] 2025-06-05 04:19:38,960 | INFO     | event service: False
[2025-06-05 06:21:17] 2025-06-05 04:19:38,960 | INFO     | sizes: {0: 2397351, 1: 2397351, 5: 2397585, 11: 2397641, 9270: 2425704, 9271: 2434667, 9272: 2434851, 9276: 2435021}
[2025-06-05 06:21:17] 2025-06-05 04:19:38,960 | INFO     | --------------------------------------------------
[2025-06-05 06:21:17] 2025-06-05 04:19:38,960 | INFO     | 
[2025-06-05 06:21:17] 2025-06-05 04:19:38,960 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-06-05 06:21:17] 2025-06-05 04:19:38,982 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,984 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,984 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,984 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,984 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 06:21:17] 2025-06-05 04:19:38,984 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,984 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 06:21:17] 2025-06-05 04:19:38,985 | INFO     | job 6677400976 has completed (purged errors)
[2025-06-05 06:21:17] 2025-06-05 04:19:38,985 | INFO     | overall cleanup function is called
[2025-06-05 06:21:17] 2025-06-05 04:19:39,993 | INFO     | --- collectZombieJob: --- 10, [814889]
[2025-06-05 06:21:17] 2025-06-05 04:19:39,993 | INFO     | zombie collector waiting for pid 814889
[2025-06-05 06:21:17] 2025-06-05 04:19:39,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 06:21:17] 2025-06-05 04:19:39,993 | INFO     | collected zombie processes
[2025-06-05 06:21:17] 2025-06-05 04:19:39,993 | INFO     | will attempt to kill all subprocesses of pid=814889
[2025-06-05 06:21:17] 2025-06-05 04:19:40,405 | INFO     | process IDs to be killed: [814889] (in reverse order)
[2025-06-05 06:21:17] 2025-06-05 04:19:40,518 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 06:21:17] 2025-06-05 04:19:40,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 06:21:17] 2025-06-05 04:19:40,532 | INFO     | did not find any defunct processes belonging to 814889
[2025-06-05 06:21:17] 2025-06-05 04:19:40,545 | INFO     | did not find any defunct processes belonging to 814889
[2025-06-05 06:21:17] 2025-06-05 04:19:40,546 | INFO     | ready for new job
[2025-06-05 06:21:17] 2025-06-05 04:19:40,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 06:21:17] 2025-06-05 04:19:40,548 | INFO     | **************************************
[2025-06-05 06:21:17] 2025-06-05 04:19:40,548 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 06:21:17] 2025-06-05 04:19:40,548 | INFO     | **************************************
[2025-06-05 06:21:17] 2025-06-05 04:19:40,548 | INFO     | 
[2025-06-05 06:21:17] 2025-06-05 04:19:40,552 | INFO     | architecture information:
[2025-06-05 06:21:17] 2025-06-05 04:19:40,552 | INFO     | executing command: cat /etc/os-release
[2025-06-05 06:21:17] 2025-06-05 04:19:40,568 | INFO     | cat /etc/os-release:
[2025-06-05 06:21:17] NAME="CentOS Linux"
[2025-06-05 06:21:17] VERSION="7 (Core)"
[2025-06-05 06:21:17] ID="centos"
[2025-06-05 06:21:17] ID_LIKE="rhel fedora"
[2025-06-05 06:21:17] VERSION_ID="7"
[2025-06-05 06:21:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 06:21:17] ANSI_COLOR="0;31"
[2025-06-05 06:21:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 06:21:17] HOME_URL="https://www.centos.org/"
[2025-06-05 06:21:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 06:21:17] 
[2025-06-05 06:21:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 06:21:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 06:21:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 06:21:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 06:21:17] 
[2025-06-05 06:21:17] 2025-06-05 04:19:40,569 | INFO     | **************************************
[2025-06-05 06:21:17] 2025-06-05 04:19:41,071 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-06-05 06:21:17] 2025-06-05 04:19:41,088 | INFO     | sufficient remaining disk space (668245950464 B)
[2025-06-05 06:21:17] 2025-06-05 04:19:41,088 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 06:21:17] 2025-06-05 04:19:41,088 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 06:21:17] 2025-06-05 04:19:41,089 | INFO     | update_server=False
[2025-06-05 06:21:17] 2025-06-05 04:19:41,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 06:21:17] 2025-06-05 04:19:41,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 06:21:17] 2025-06-05 04:19:41,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:21:17] 2025-06-05 04:19:41,482 | INFO     | aborting loop
[2025-06-05 06:21:17] 2025-06-05 04:19:41,853 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 06:21:17] 2025-06-05 04:19:41,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 06:21:17] 2025-06-05 04:19:41,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 06:21:17] 2025-06-05 04:19:41,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 06:21:17] 2025-06-05 04:19:42,070 | INFO     | all data control threads have been joined
[2025-06-05 06:21:17] 2025-06-05 04:19:42,080 | INFO     | all job control threads have been joined
[2025-06-05 06:21:17] 2025-06-05 04:19:42,094 | INFO     | [job] retrieve thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:42,163 | INFO     | all payload control threads have been joined
[2025-06-05 06:21:17] 2025-06-05 04:19:42,483 | INFO     | [job] job monitor thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:42,815 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:42,966 | INFO     | [job] validate thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:42,976 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:42,981 | INFO     | [data] copytool_in thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:43,075 | INFO     | [data] control thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:43,085 | INFO     | [job] control thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:43,168 | INFO     | [payload] control thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:43,236 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:43,489 | INFO     | [payload] validate_post thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:43,682 | INFO     | [payload] failed_post thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:43,908 | INFO     | [data] copytool_out thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:43,968 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 06:21:17] 2025-06-05 04:19:44,973 | INFO     | [job] queue monitor thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:45,095 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:51,819 | INFO     | job.realtimelogging is not enabled
[2025-06-05 06:21:17] 2025-06-05 04:19:52,824 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 06:21:17] 2025-06-05 04:19:54,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23408442664768)>', '<ExcThread(monitor, started 23408202970880)>']
[2025-06-05 06:21:17] 2025-06-05 04:19:54,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 06:21:17] 2025-06-05 04:19:54,919 | INFO     | [monitor] control thread has ended
[2025-06-05 06:21:17] 2025-06-05 04:19:59,512 | INFO     | all workflow threads have been joined
[2025-06-05 06:21:17] 2025-06-05 04:19:59,512 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 06:21:17] 2025-06-05 04:19:59,512 | INFO     | traces error code: 0
[2025-06-05 06:21:17] 2025-06-05 04:19:59,513 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 06:21:17] 2025-06-05 04:19:59,694 [wrapper] ==== pilot stdout END ====
[2025-06-05 06:21:17] 2025-06-05 04:19:59,698 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 06:21:17] 2025-06-05 04:19:59,701 [wrapper] pilotpid: 807302
[2025-06-05 06:21:17] 2025-06-05 04:19:59,704 [wrapper] Pilot exit status: 0
[2025-06-05 06:21:17] 2025-06-05 04:19:59,717 [wrapper] pandaids: 6677400976
[2025-06-05 06:21:17] 2025-06-05 04:19:59,791 [wrapper] cleanup supervisor_pilot 1135387 807303
[2025-06-05 06:21:17] 2025-06-05 04:19:59,794 [wrapper] Test setup, not cleaning
[2025-06-05 06:21:17] 2025-06-05 04:19:59,798 [wrapper] apfmon messages muted
[2025-06-05 06:21:17] 2025-06-05 04:19:59,801 [wrapper] ==== wrapper stdout END ====
[2025-06-05 06:21:17] 2025-06-05 04:19:59,804 [wrapper] ==== wrapper stderr END ====
[2025-06-05 06:21:17]  *** Error codes and diagnostics ***
[2025-06-05 06:21:17]     "exeErrorCode": 0,
[2025-06-05 06:21:17]     "exeErrorDiag": "",
[2025-06-05 06:21:17]     "pilotErrorCode": 0,
[2025-06-05 06:21:17]     "pilotErrorDiag": "",
[2025-06-05 06:21:17]  *** Listing of results directory ***
[2025-06-05 06:21:17] total 389724
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc    495897 Jun  2 22:47 pilot3.tar.gz
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc      5111 Jun  2 23:04 queuedata.json
[2025-06-05 06:21:17] -rwx------ 1 boinc boinc     37140 Jun  2 23:07 runpilot2-wrapper.sh
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc       100 Jun  5 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 06:21:17] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 03:44 run_atlas
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc       105 Jun  5 03:44 job.xml
[2025-06-05 06:21:17] -rw-r--r-- 2 boinc boinc 214346197 Jun  5 03:44 EVNT.45006593._000476.pool.root.1
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc      6636 Jun  5 03:44 init_data.xml
[2025-06-05 06:21:17] -rw-r--r-- 2 boinc boinc    508878 Jun  5 03:44 input.tar.gz
[2025-06-05 06:21:17] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:44 start_atlas.sh
[2025-06-05 06:21:17] drwxrwx--x 2 boinc boinc      4096 Jun  5 03:44 shared
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc         0 Jun  5 03:44 boinc_lockfile
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc      2524 Jun  5 03:44 pandaJob.out
[2025-06-05 06:21:17] -rw------- 1 boinc boinc    987109 Jun  5 03:44 agis_schedconf.cvmfs.json
[2025-06-05 06:21:17] -rw------- 1 boinc boinc   1598969 Jun  5 03:44 agis_ddmendpoints.agis.ALL.json
[2025-06-05 06:21:17] drwx------ 4 boinc boinc      4096 Jun  5 03:44 pilot3
[2025-06-05 06:21:17] -rw------- 1 boinc boinc 178542363 Jun  5 06:19 HITS.45006595._011893.pool.root.1
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc       528 Jun  5 06:19 boinc_task_state.xml
[2025-06-05 06:21:17] -rw------- 1 boinc boinc        95 Jun  5 06:19 pilot_heartbeat.json
[2025-06-05 06:21:17] -rw------- 1 boinc boinc      1034 Jun  5 06:19 memory_monitor_summary.json
[2025-06-05 06:21:17] -rw------- 1 boinc boinc    296156 Jun  5 06:19 log.45006595._011893.job.log.tgz.1
[2025-06-05 06:21:17] -rw------- 1 boinc boinc      7716 Jun  5 06:19 heartbeat.json
[2025-06-05 06:21:17] -rw------- 1 boinc boinc      4435 Jun  5 06:19 pilotlog.txt
[2025-06-05 06:21:17] -rw------- 1 boinc boinc    878602 Jun  5 06:19 log.45006595._011893.job.log.1
[2025-06-05 06:21:17] -rw------- 1 boinc boinc       357 Jun  5 06:19 output.list
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc       620 Jun  5 06:19 runtime_log
[2025-06-05 06:21:17] -rw------- 1 boinc boinc   1198080 Jun  5 06:19 result.tar.gz
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc      9025 Jun  5 06:19 runtime_log.err
[2025-06-05 06:21:17] -rw------- 1 boinc boinc       662 Jun  5 06:19 ncwLDmMYRg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUigKDmh7Yjum.diag
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc        26 Jun  5 06:21 wrapper_checkpoint.txt
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc      8192 Jun  5 06:21 boinc_mmap_file
[2025-06-05 06:21:17] -rw-r--r-- 1 boinc boinc     20926 Jun  5 06:21 stderr.txt
[2025-06-05 06:21:17] HITS file was successfully produced:
[2025-06-05 06:21:17] -rw------- 1 boinc boinc 178542363 Jun  5 06:19 shared/HITS.pool.root.1
[2025-06-05 06:21:17]  *** Contents of shared directory: ***
[2025-06-05 06:21:17] total 385380
[2025-06-05 06:21:17] -rw-r--r-- 2 boinc boinc 214346197 Jun  5 03:44 ATLAS.root_0
[2025-06-05 06:21:17] -rw-r--r-- 2 boinc boinc    508878 Jun  5 03:44 input.tar.gz
[2025-06-05 06:21:17] -rw-r--r-- 2 boinc boinc     15093 Jun  5 03:44 start_atlas.sh
[2025-06-05 06:21:17] -rw------- 1 boinc boinc 178542363 Jun  5 06:19 HITS.pool.root.1
[2025-06-05 06:21:17] -rw------- 1 boinc boinc   1198080 Jun  5 06:19 result.tar.gz
06:21:19 (803630): run_atlas exited; CPU time 35790.899853
06:21:19 (803630): called boinc_finish(0)

</stderr_txt>
]]>

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