Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:30:48 (2651922): wrapper (7.7.26015): starting
10:30:48 (2651922): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 10:30:48] Arguments: --nthreads 4
[2025-06-05 10:30:48] Threads: 4
[2025-06-05 10:30:48] Checking for CVMFS
[2025-06-05 10:30:48] No cvmfs_config command found, will try listing directly
[2025-06-05 10:30:48] CVMFS is ok
[2025-06-05 10:30:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:30:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 10:30:48] Further information can be found at the LHC@home message board.
[2025-06-05 10:30:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:30:48] Checking for apptainer binary...
[2025-06-05 10:30:48] which: no apptainer in ((null))
[2025-06-05 10:30:48] apptainer is not installed, using version from CVMFS
[2025-06-05 10:30:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:30:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2025-06-05 10:30:48] apptainer works
[2025-06-05 10:30:49] Set ATHENA_PROC_NUMBER=4
[2025-06-05 10:30:49] Set ATHENA_CORE_NUMBER=4
[2025-06-05 10:30:49] Starting ATLAS job with PandaID=6677574192
[2025-06-05 10:30:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:22:55]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:22:55] 2025-06-05 11:21:31,805 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-05 13:22:55] 2025-06-05 11:21:31,806 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6677574192/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:22:55] 2025-06-05 11:21:31,807 | INFO     | extracted standard info from prmon json
[2025-06-05 13:22:55] 2025-06-05 11:21:31,807 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:22:55] 2025-06-05 11:21:31,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:22:55] 2025-06-05 11:21:31,807 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:22:55] 2025-06-05 11:21:31,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:22:55] 2025-06-05 11:21:31,812 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:22:55] 2025-06-05 11:21:31,812 | INFO     | sum of square deviations: 1470248962.0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,813 | INFO     | sum of deviations: 9035277421.999998
[2025-06-05 13:22:55] 2025-06-05 11:21:31,813 | INFO     | mean x: 1749117382.5
[2025-06-05 13:22:55] 2025-06-05 11:21:31,813 | INFO     | mean y: 2298517.4285714286
[2025-06-05 13:22:55] 2025-06-05 11:21:31,814 | INFO     | -- intersect: -10746738688.509605
[2025-06-05 13:22:55] 2025-06-05 11:21:31,814 | INFO     | intersect: -10746738688.509605
[2025-06-05 13:22:55] 2025-06-05 11:21:31,814 | INFO     | chi2: 2.496121625873031
[2025-06-05 13:22:55] 2025-06-05 11:21:31,814 | INFO     | sum of square deviations: 1342841922.0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,815 | INFO     | sum of deviations: 19093764878.999996
[2025-06-05 13:22:55] 2025-06-05 11:21:31,815 | INFO     | mean x: 1749117230.0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,815 | INFO     | mean y: 2310252.282208589
[2025-06-05 13:22:55] 2025-06-05 11:21:31,816 | INFO     | -- intersect: -24868251642.066933
[2025-06-05 13:22:55] 2025-06-05 11:21:31,816 | INFO     | intersect: -24868251642.066933
[2025-06-05 13:22:55] 2025-06-05 11:21:31,816 | INFO     | chi2: 1.6986514726508921
[2025-06-05 13:22:55] 2025-06-05 11:21:31,816 | INFO     | current chi2=1.6986514726508921 (change=31.948369220318735 %)
[2025-06-05 13:22:55] 2025-06-05 11:21:31,816 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 13:22:55] 2025-06-05 11:21:31,817 | INFO     | sum of deviations: 18440525974.500004
[2025-06-05 13:22:55] 2025-06-05 11:21:31,817 | INFO     | mean x: 1749117077.5
[2025-06-05 13:22:55] 2025-06-05 11:21:31,817 | INFO     | mean y: 2309421.120253165
[2025-06-05 13:22:55] 2025-06-05 11:21:31,817 | INFO     | -- intersect: -26370712548.009808
[2025-06-05 13:22:55] 2025-06-05 11:21:31,818 | INFO     | intersect: -26370712548.009808
[2025-06-05 13:22:55] 2025-06-05 11:21:31,818 | INFO     | chi2: 1.7005187535797845
[2025-06-05 13:22:55] 2025-06-05 11:21:31,818 | INFO     | current chi2=1.7005187535797845 (change=-0.1099272545873334 %)
[2025-06-05 13:22:55] 2025-06-05 11:21:31,818 | INFO     | right removable region: 157
[2025-06-05 13:22:55] 2025-06-05 11:21:31,818 | INFO     | sum of square deviations: 1342841922.0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,819 | INFO     | sum of deviations: -18185832338.999992
[2025-06-05 13:22:55] 2025-06-05 11:21:31,819 | INFO     | mean x: 1749117535.0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,819 | INFO     | mean y: 2330730.3496932513
[2025-06-05 13:22:55] 2025-06-05 11:21:31,820 | INFO     | -- intersect: 23690270249.946365
[2025-06-05 13:22:55] 2025-06-05 11:21:31,820 | INFO     | intersect: 23690270249.946365
[2025-06-05 13:22:55] 2025-06-05 11:21:31,820 | INFO     | chi2: 0.8479379703758158
[2025-06-05 13:22:55] 2025-06-05 11:21:31,820 | INFO     | current chi2=0.8479379703758158 (change=66.02978149835768 %)
[2025-06-05 13:22:55] 2025-06-05 11:21:31,820 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 13:22:55] 2025-06-05 11:21:31,821 | INFO     | sum of deviations: -17959778783.000008
[2025-06-05 13:22:55] 2025-06-05 11:21:31,821 | INFO     | mean x: 1749117687.5
[2025-06-05 13:22:55] 2025-06-05 11:21:31,821 | INFO     | mean y: 2330418.759493671
[2025-06-05 13:22:55] 2025-06-05 11:21:31,821 | INFO     | -- intersect: 25687812830.986862
[2025-06-05 13:22:55] 2025-06-05 11:21:31,822 | INFO     | intersect: 25687812830.986862
[2025-06-05 13:22:55] 2025-06-05 11:21:31,822 | INFO     | chi2: 0.8448668709320725
[2025-06-05 13:22:55] 2025-06-05 11:21:31,822 | INFO     | current chi2=0.8448668709320725 (change=0.3621844463908297 %)
[2025-06-05 13:22:55] 2025-06-05 11:21:31,822 | INFO     | left removable region: 20
[2025-06-05 13:22:55] 2025-06-05 11:21:31,822 | INFO     | sum of square deviations: 797291228.0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,823 | INFO     | sum of deviations: -5295514187.999999
[2025-06-05 13:22:55] 2025-06-05 11:21:31,823 | INFO     | mean x: 1749117657.0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,823 | INFO     | mean y: 2340662.7445255476
[2025-06-05 13:22:55] 2025-06-05 11:21:31,823 | INFO     | -- intersect: 11619773595.450537
[2025-06-05 13:22:55] 2025-06-05 11:21:31,823 | INFO     | intersect: 11619773595.450537
[2025-06-05 13:22:55] 2025-06-05 11:21:31,824 | INFO     | chi2: 0.014502595195912116
[2025-06-05 13:22:55] 2025-06-05 11:21:31,824 | INFO     | -- intersect: 11619773595.450537
[2025-06-05 13:22:55] 2025-06-05 11:21:31,824 | INFO     | current memory leak: -6.64 B/s (using 137 data points, chi2=0.01)
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | ..............................
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | . Timing measurements:
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | . get job = 0 s
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | . initial setup = 1 s
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | . payload setup = 8 s
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | . stage-in = 0 s
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | . payload execution = 10195 s
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | . stage-out = 0 s
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | . log creation = 0 s
[2025-06-05 13:22:55] 2025-06-05 11:21:31,825 | INFO     | ..............................
[2025-06-05 13:22:55] 2025-06-05 11:21:31,940 | INFO     | 
[2025-06-05 13:22:55] 2025-06-05 11:21:31,940 | INFO     | job summary report
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | --------------------------------------------------
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | PanDA job id: 6677574192
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | task id: 45006595
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | errors: (none)
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | pilot state: finished 
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | transexitcode: 0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | exeerrorcode: 0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | exeerrordiag: 
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | exitcode: 0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | exitmsg: OK
[2025-06-05 13:22:55] 2025-06-05 11:21:31,941 | INFO     | cpuconsumptiontime: 38803 s
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | nevents: 400
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | neventsw: 0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | pid: 2664852
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | pgrp: 2664852
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | corecount: 4
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | event service: False
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | sizes: {0: 2397182, 1: 2397381, 6: 2397587, 12: 2397615, 10207: 2426016, 10208: 2434979, 10212: 2435163, 10216: 2435333}
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | --------------------------------------------------
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | 
[2025-06-05 13:22:55] 2025-06-05 11:21:31,942 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-05 13:22:55] 2025-06-05 11:21:31,965 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,966 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:22:55] 2025-06-05 11:21:31,967 | INFO     | job 6677574192 has completed (purged errors)
[2025-06-05 13:22:55] 2025-06-05 11:21:31,968 | INFO     | overall cleanup function is called
[2025-06-05 13:22:55] 2025-06-05 11:21:32,976 | INFO     | --- collectZombieJob: --- 10, [2664852]
[2025-06-05 13:22:55] 2025-06-05 11:21:32,976 | INFO     | zombie collector waiting for pid 2664852
[2025-06-05 13:22:55] 2025-06-05 11:21:32,976 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:22:55] 2025-06-05 11:21:32,976 | INFO     | collected zombie processes
[2025-06-05 13:22:55] 2025-06-05 11:21:32,977 | INFO     | will attempt to kill all subprocesses of pid=2664852
[2025-06-05 13:22:55] 2025-06-05 11:21:33,354 | INFO     | process IDs to be killed: [2664852] (in reverse order)
[2025-06-05 13:22:55] 2025-06-05 11:21:33,474 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:22:55] 2025-06-05 11:21:33,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:22:55] 2025-06-05 11:21:33,487 | INFO     | did not find any defunct processes belonging to 2664852
[2025-06-05 13:22:55] 2025-06-05 11:21:33,499 | INFO     | did not find any defunct processes belonging to 2664852
[2025-06-05 13:22:55] 2025-06-05 11:21:33,499 | INFO     | ready for new job
[2025-06-05 13:22:55] 2025-06-05 11:21:33,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:22:55] 2025-06-05 11:21:33,501 | INFO     | **************************************
[2025-06-05 13:22:55] 2025-06-05 11:21:33,501 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:22:55] 2025-06-05 11:21:33,501 | INFO     | **************************************
[2025-06-05 13:22:55] 2025-06-05 11:21:33,502 | INFO     | 
[2025-06-05 13:22:55] 2025-06-05 11:21:33,506 | INFO     | architecture information:
[2025-06-05 13:22:55] 2025-06-05 11:21:33,506 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:22:55] 2025-06-05 11:21:33,522 | INFO     | cat /etc/os-release:
[2025-06-05 13:22:55] NAME="CentOS Linux"
[2025-06-05 13:22:55] VERSION="7 (Core)"
[2025-06-05 13:22:55] ID="centos"
[2025-06-05 13:22:55] ID_LIKE="rhel fedora"
[2025-06-05 13:22:55] VERSION_ID="7"
[2025-06-05 13:22:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:22:55] ANSI_COLOR="0;31"
[2025-06-05 13:22:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:22:55] HOME_URL="https://www.centos.org/"
[2025-06-05 13:22:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:22:55] 
[2025-06-05 13:22:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:22:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:22:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:22:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:22:55] 
[2025-06-05 13:22:55] 2025-06-05 11:21:33,523 | INFO     | **************************************
[2025-06-05 13:22:55] 2025-06-05 11:21:34,025 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-05 13:22:55] 2025-06-05 11:21:34,043 | INFO     | sufficient remaining disk space (670648238080 B)
[2025-06-05 13:22:55] 2025-06-05 11:21:34,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:22:55] 2025-06-05 11:21:34,044 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:22:55] 2025-06-05 11:21:34,044 | INFO     | update_server=False
[2025-06-05 13:22:55] 2025-06-05 11:21:34,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:22:55] 2025-06-05 11:21:34,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:22:55] 2025-06-05 11:21:34,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:22:55] 2025-06-05 11:21:34,045 | INFO     | aborting loop
[2025-06-05 13:22:55] 2025-06-05 11:21:34,169 | INFO     | all job control threads have been joined
[2025-06-05 13:22:55] 2025-06-05 11:21:34,269 | INFO     | all payload control threads have been joined
[2025-06-05 13:22:55] 2025-06-05 11:21:34,495 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:22:55] 2025-06-05 11:21:34,495 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:22:55] 2025-06-05 11:21:34,495 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:22:55] 2025-06-05 11:21:34,662 | INFO     | all data control threads have been joined
[2025-06-05 13:22:55] 2025-06-05 11:21:34,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:22:55] 2025-06-05 11:21:35,050 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,050 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,067 | INFO     | [job] validate thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,172 | INFO     | [job] control thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,274 | INFO     | [payload] control thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,306 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,325 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,440 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,440 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,668 | INFO     | [data] control thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:35,880 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:36,026 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:36,094 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:36,675 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:36,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:22:55] 2025-06-05 11:21:37,955 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:38,050 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:22:55] 2025-06-05 11:21:39,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22822262437696)>', '<ExcThread(monitor, started 22822013314816)>']
[2025-06-05 13:22:55] 2025-06-05 11:21:40,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:22:55] 2025-06-05 11:21:40,525 | INFO     | [monitor] control thread has ended
[2025-06-05 13:22:55] 2025-06-05 11:21:44,999 | INFO     | all workflow threads have been joined
[2025-06-05 13:22:55] 2025-06-05 11:21:44,999 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:22:55] 2025-06-05 11:21:44,999 | INFO     | traces error code: 0
[2025-06-05 13:22:55] 2025-06-05 11:21:45,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:22:55] 2025-06-05 11:21:45,184 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:22:55] 2025-06-05 11:21:45,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:22:55] 2025-06-05 11:21:45,189 [wrapper] pilotpid: 2655626
[2025-06-05 13:22:55] 2025-06-05 11:21:45,192 [wrapper] Pilot exit status: 0
[2025-06-05 13:22:55] 2025-06-05 11:21:45,204 [wrapper] pandaids: 6677574192
[2025-06-05 13:22:55] 2025-06-05 11:21:45,283 [wrapper] cleanup supervisor_pilot 2964867 2655627
[2025-06-05 13:22:55] 2025-06-05 11:21:45,286 [wrapper] Test setup, not cleaning
[2025-06-05 13:22:55] 2025-06-05 11:21:45,289 [wrapper] apfmon messages muted
[2025-06-05 13:22:55] 2025-06-05 11:21:45,292 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:22:55] 2025-06-05 11:21:45,295 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:22:55]  *** Error codes and diagnostics ***
[2025-06-05 13:22:55]     "exeErrorCode": 0,
[2025-06-05 13:22:55]     "exeErrorDiag": "",
[2025-06-05 13:22:55]     "pilotErrorCode": 0,
[2025-06-05 13:22:55]     "pilotErrorDiag": "",
[2025-06-05 13:22:55]  *** Listing of results directory ***
[2025-06-05 13:22:55] total 390396
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc    495897 Jun  3 11:56 pilot3.tar.gz
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc      5111 Jun  3 12:12 queuedata.json
[2025-06-05 13:22:55] -rwx------ 1 boinc boinc     37140 Jun  3 12:13 runpilot2-wrapper.sh
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc       100 Jun  5 10:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:22:55] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 10:30 run_atlas
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc       105 Jun  5 10:30 job.xml
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc      6633 Jun  5 10:30 init_data.xml
[2025-06-05 13:22:55] -rw-r--r-- 2 boinc boinc 216111843 Jun  5 10:30 EVNT.45006593._001142.pool.root.1
[2025-06-05 13:22:55] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:30 start_atlas.sh
[2025-06-05 13:22:55] drwxrwx--x 2 boinc boinc      4096 Jun  5 10:30 shared
[2025-06-05 13:22:55] -rw-r--r-- 2 boinc boinc    508880 Jun  5 10:30 input.tar.gz
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc         0 Jun  5 10:30 boinc_lockfile
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc      2525 Jun  5 10:30 pandaJob.out
[2025-06-05 13:22:55] -rw------- 1 boinc boinc    983281 Jun  5 10:30 agis_schedconf.cvmfs.json
[2025-06-05 13:22:55] -rw------- 1 boinc boinc   1598969 Jun  5 10:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:22:55] drwx------ 4 boinc boinc      4096 Jun  5 10:31 pilot3
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc       528 Jun  5 13:20 boinc_task_state.xml
[2025-06-05 13:22:55] -rw------- 1 boinc boinc 177298328 Jun  5 13:20 HITS.45006595._028562.pool.root.1
[2025-06-05 13:22:55] -rw------- 1 boinc boinc        95 Jun  5 13:20 pilot_heartbeat.json
[2025-06-05 13:22:55] -rw------- 1 boinc boinc      1037 Jun  5 13:21 memory_monitor_summary.json
[2025-06-05 13:22:55] -rw------- 1 boinc boinc    299935 Jun  5 13:21 log.45006595._028562.job.log.tgz.1
[2025-06-05 13:22:55] -rw------- 1 boinc boinc      7731 Jun  5 13:21 heartbeat.json
[2025-06-05 13:22:55] -rw------- 1 boinc boinc      4363 Jun  5 13:21 pilotlog.txt
[2025-06-05 13:22:55] -rw------- 1 boinc boinc    960664 Jun  5 13:21 log.45006595._028562.job.log.1
[2025-06-05 13:22:55] -rw------- 1 boinc boinc       357 Jun  5 13:21 output.list
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc       620 Jun  5 13:21 runtime_log
[2025-06-05 13:22:55] -rw------- 1 boinc boinc   1280000 Jun  5 13:21 result.tar.gz
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc      9026 Jun  5 13:21 runtime_log.err
[2025-06-05 13:22:55] -rw------- 1 boinc boinc       664 Jun  5 13:21 H80LDmfpdg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlQjKDmObXwSm.diag
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc        26 Jun  5 13:22 wrapper_checkpoint.txt
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc      8192 Jun  5 13:22 boinc_mmap_file
[2025-06-05 13:22:55] -rw-r--r-- 1 boinc boinc     20628 Jun  5 13:22 stderr.txt
[2025-06-05 13:22:55] HITS file was successfully produced:
[2025-06-05 13:22:55] -rw------- 1 boinc boinc 177298328 Jun  5 13:20 shared/HITS.pool.root.1
[2025-06-05 13:22:55]  *** Contents of shared directory: ***
[2025-06-05 13:22:55] total 385968
[2025-06-05 13:22:55] -rw-r--r-- 2 boinc boinc 216111843 Jun  5 10:30 ATLAS.root_0
[2025-06-05 13:22:55] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:30 start_atlas.sh
[2025-06-05 13:22:55] -rw-r--r-- 2 boinc boinc    508880 Jun  5 10:30 input.tar.gz
[2025-06-05 13:22:55] -rw------- 1 boinc boinc 177298328 Jun  5 13:20 HITS.pool.root.1
[2025-06-05 13:22:55] -rw------- 1 boinc boinc   1280000 Jun  5 13:21 result.tar.gz
13:22:57 (2651922): run_atlas exited; CPU time 39248.955641
13:22:57 (2651922): called boinc_finish(0)

</stderr_txt>
]]>

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