Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:30:03 (1228596): wrapper (7.7.26015): starting
01:30:03 (1228596): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 01:30:03] Arguments: --nthreads 4
[2025-06-05 01:30:03] Threads: 4
[2025-06-05 01:30:03] Checking for CVMFS
[2025-06-05 01:30:03] No cvmfs_config command found, will try listing directly
[2025-06-05 01:30:03] CVMFS is ok
[2025-06-05 01:30:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 01:30:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 01:30:03] Further information can be found at the LHC@home message board.
[2025-06-05 01:30:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 01:30:03] Checking for apptainer binary...
[2025-06-05 01:30:03] which: no apptainer in ((null))
[2025-06-05 01:30:03] apptainer is not installed, using version from CVMFS
[2025-06-05 01:30:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 01:30:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-05 01:30:03] apptainer works
[2025-06-05 01:30:03] Set ATHENA_PROC_NUMBER=4
[2025-06-05 01:30:03] Set ATHENA_CORE_NUMBER=4
[2025-06-05 01:30:03] Starting ATLAS job with PandaID=6677574186
[2025-06-05 01:30:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 03:47:14]  *** The last 200 lines of the pilot log: ***
[2025-06-05 03:47:14] 2025-06-05 01:46:46,285 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 03:47:14] 2025-06-05 01:46:48,148 | INFO     | monitor loop #570: job 0:6677574186 is in state 'finished'
[2025-06-05 03:47:14] 2025-06-05 01:46:48,148 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:47:14] 2025-06-05 01:46:50,652 | INFO     | monitor loop #571: job 0:6677574186 is in state 'finished'
[2025-06-05 03:47:14] 2025-06-05 01:46:50,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 03:47:14] 2025-06-05 01:46:52,397 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 03:47:14] 2025-06-05 01:46:52,398 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6677574186/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 03:47:14] 2025-06-05 01:46:52,399 | INFO     | extracted standard info from prmon json
[2025-06-05 03:47:14] 2025-06-05 01:46:52,399 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 03:47:14] 2025-06-05 01:46:52,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 03:47:14] 2025-06-05 01:46:52,400 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 03:47:14] 2025-06-05 01:46:52,400 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 03:47:14] 2025-06-05 01:46:52,403 | INFO     | fitting pss+swap vs Time
[2025-06-05 03:47:14] 2025-06-05 01:46:52,403 | INFO     | sum of square deviations: 746051197.5
[2025-06-05 03:47:14] 2025-06-05 01:46:52,404 | INFO     | sum of deviations: 14929622083.000002
[2025-06-05 03:47:14] 2025-06-05 01:46:52,404 | INFO     | mean x: 1749083907.5
[2025-06-05 03:47:14] 2025-06-05 01:46:52,404 | INFO     | mean y: 2310304.7910447763
[2025-06-05 03:47:14] 2025-06-05 01:46:52,404 | INFO     | -- intersect: -34999525786.266136
[2025-06-05 03:47:14] 2025-06-05 01:46:52,404 | INFO     | intersect: -34999525786.266136
[2025-06-05 03:47:14] 2025-06-05 01:46:52,404 | INFO     | chi2: 1.6868524176745423
[2025-06-05 03:47:14] 2025-06-05 01:46:52,405 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,406 | INFO     | sum of deviations: 14371803434.999998
[2025-06-05 03:47:14] 2025-06-05 01:46:52,406 | INFO     | mean x: 1749083755.0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,406 | INFO     | mean y: 2309246.7751937984
[2025-06-05 03:47:14] 2025-06-05 01:46:52,406 | INFO     | -- intersect: -37763641172.62154
[2025-06-05 03:47:14] 2025-06-05 01:46:52,406 | INFO     | intersect: -37763641172.62154
[2025-06-05 03:47:14] 2025-06-05 01:46:52,406 | INFO     | chi2: 1.6896173021578358
[2025-06-05 03:47:14] 2025-06-05 01:46:52,406 | INFO     | current chi2=1.6896173021578358 (change=-0.16390790648449807 %)
[2025-06-05 03:47:14] 2025-06-05 01:46:52,407 | INFO     | right removable region: 128
[2025-06-05 03:47:14] 2025-06-05 01:46:52,409 | INFO     | sum of square deviations: 665612480.0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,410 | INFO     | sum of deviations: -6170607317.0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,410 | INFO     | mean x: 1749084060.0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,410 | INFO     | mean y: 2349682.310077519
[2025-06-05 03:47:14] 2025-06-05 01:46:52,410 | INFO     | -- intersect: 16217356496.311022
[2025-06-05 03:47:14] 2025-06-05 01:46:52,410 | INFO     | intersect: 16217356496.311022
[2025-06-05 03:47:14] 2025-06-05 01:46:52,411 | INFO     | chi2: 0.014315014295318309
[2025-06-05 03:47:14] 2025-06-05 01:46:52,411 | INFO     | current chi2=0.014315014295318309 (change=99.15137719546013 %)
[2025-06-05 03:47:14] 2025-06-05 01:46:52,411 | INFO     | sum of square deviations: 591173875.0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,412 | INFO     | sum of deviations: -5021454242.000002
[2025-06-05 03:47:14] 2025-06-05 01:46:52,412 | INFO     | mean x: 1749084212.5
[2025-06-05 03:47:14] 2025-06-05 01:46:52,412 | INFO     | mean y: 2347314.306451613
[2025-06-05 03:47:14] 2025-06-05 01:46:52,412 | INFO     | -- intersect: 14859137693.403225
[2025-06-05 03:47:14] 2025-06-05 01:46:52,412 | INFO     | intersect: 14859137693.403225
[2025-06-05 03:47:14] 2025-06-05 01:46:52,412 | INFO     | chi2: 0.013509727622094526
[2025-06-05 03:47:14] 2025-06-05 01:46:52,412 | INFO     | current chi2=0.013509727622094526 (change=5.625468872127846 %)
[2025-06-05 03:47:14] 2025-06-05 01:46:52,412 | INFO     | left removable region: 20
[2025-06-05 03:47:14] 2025-06-05 01:46:52,413 | INFO     | sum of square deviations: 390582207.0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,413 | INFO     | sum of deviations: -1711466142.0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,413 | INFO     | mean x: 1749084334.5
[2025-06-05 03:47:14] 2025-06-05 01:46:52,413 | INFO     | mean y: 2339863.907407407
[2025-06-05 03:47:14] 2025-06-05 01:46:52,414 | INFO     | -- intersect: 7666535939.278943
[2025-06-05 03:47:14] 2025-06-05 01:46:52,414 | INFO     | intersect: 7666535939.278943
[2025-06-05 03:47:14] 2025-06-05 01:46:52,414 | INFO     | chi2: 0.005204902188189763
[2025-06-05 03:47:14] 2025-06-05 01:46:52,414 | INFO     | -- intersect: 7666535939.278943
[2025-06-05 03:47:14] 2025-06-05 01:46:52,414 | INFO     | current memory leak: -4.38 B/s (using 108 data points, chi2=0.01)
[2025-06-05 03:47:14] 2025-06-05 01:46:52,414 | INFO     | ..............................
[2025-06-05 03:47:14] 2025-06-05 01:46:52,415 | INFO     | . Timing measurements:
[2025-06-05 03:47:14] 2025-06-05 01:46:52,415 | INFO     | . get job = 0 s
[2025-06-05 03:47:14] 2025-06-05 01:46:52,415 | INFO     | . initial setup = 1 s
[2025-06-05 03:47:14] 2025-06-05 01:46:52,415 | INFO     | . payload setup = 9 s
[2025-06-05 03:47:14] 2025-06-05 01:46:52,415 | INFO     | . stage-in = 0 s
[2025-06-05 03:47:14] 2025-06-05 01:46:52,415 | INFO     | . payload execution = 8152 s
[2025-06-05 03:47:14] 2025-06-05 01:46:52,415 | INFO     | . stage-out = 1 s
[2025-06-05 03:47:14] 2025-06-05 01:46:52,415 | INFO     | . log creation = 0 s
[2025-06-05 03:47:14] 2025-06-05 01:46:52,415 | INFO     | ..............................
[2025-06-05 03:47:14] 2025-06-05 01:46:52,686 | INFO     | 
[2025-06-05 03:47:14] 2025-06-05 01:46:52,686 | INFO     | job summary report
[2025-06-05 03:47:14] 2025-06-05 01:46:52,686 | INFO     | --------------------------------------------------
[2025-06-05 03:47:14] 2025-06-05 01:46:52,686 | INFO     | PanDA job id: 6677574186
[2025-06-05 03:47:14] 2025-06-05 01:46:52,686 | INFO     | task id: 45006595
[2025-06-05 03:47:14] 2025-06-05 01:46:52,686 | INFO     | errors: (none)
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | pilot state: finished 
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | transexitcode: 0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | exeerrorcode: 0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | exeerrordiag: 
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | exitcode: 0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | exitmsg: OK
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | cpuconsumptiontime: 30906 s
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | nevents: 400
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | neventsw: 0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,687 | INFO     | pid: 1239961
[2025-06-05 03:47:14] 2025-06-05 01:46:52,688 | INFO     | pgrp: 1239961
[2025-06-05 03:47:14] 2025-06-05 01:46:52,688 | INFO     | corecount: 4
[2025-06-05 03:47:14] 2025-06-05 01:46:52,688 | INFO     | event service: False
[2025-06-05 03:47:14] 2025-06-05 01:46:52,688 | INFO     | sizes: {0: 2397239, 1: 2397381, 7: 2397587, 11: 2397615, 8165: 2425657, 8167: 2434620, 8170: 2434804, 8178: 2434974}
[2025-06-05 03:47:14] 2025-06-05 01:46:52,688 | INFO     | --------------------------------------------------
[2025-06-05 03:47:14] 2025-06-05 01:46:52,688 | INFO     | 
[2025-06-05 03:47:14] 2025-06-05 01:46:52,688 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2025-06-05 03:47:14] 2025-06-05 01:46:52,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,723 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,723 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,723 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,724 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 03:47:14] 2025-06-05 01:46:52,725 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,725 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 03:47:14] 2025-06-05 01:46:52,725 | INFO     | job 6677574186 has completed (purged errors)
[2025-06-05 03:47:14] 2025-06-05 01:46:52,725 | INFO     | overall cleanup function is called
[2025-06-05 03:47:14] 2025-06-05 01:46:53,735 | INFO     | --- collectZombieJob: --- 10, [1239961]
[2025-06-05 03:47:14] 2025-06-05 01:46:53,735 | INFO     | zombie collector waiting for pid 1239961
[2025-06-05 03:47:14] 2025-06-05 01:46:53,735 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 03:47:14] 2025-06-05 01:46:53,735 | INFO     | collected zombie processes
[2025-06-05 03:47:14] 2025-06-05 01:46:53,735 | INFO     | will attempt to kill all subprocesses of pid=1239961
[2025-06-05 03:47:14] 2025-06-05 01:46:54,427 | INFO     | process IDs to be killed: [1239961] (in reverse order)
[2025-06-05 03:47:14] 2025-06-05 01:46:54,683 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 03:47:14] 2025-06-05 01:46:54,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 03:47:14] 2025-06-05 01:46:54,710 | INFO     | did not find any defunct processes belonging to 1239961
[2025-06-05 03:47:14] 2025-06-05 01:46:54,735 | INFO     | did not find any defunct processes belonging to 1239961
[2025-06-05 03:47:14] 2025-06-05 01:46:54,736 | INFO     | ready for new job
[2025-06-05 03:47:14] 2025-06-05 01:46:54,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 03:47:14] 2025-06-05 01:46:54,738 | INFO     | **************************************
[2025-06-05 03:47:14] 2025-06-05 01:46:54,738 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 03:47:14] 2025-06-05 01:46:54,738 | INFO     | **************************************
[2025-06-05 03:47:14] 2025-06-05 01:46:54,738 | INFO     | 
[2025-06-05 03:47:14] 2025-06-05 01:46:54,746 | INFO     | architecture information:
[2025-06-05 03:47:14] 2025-06-05 01:46:54,746 | INFO     | executing command: cat /etc/os-release
[2025-06-05 03:47:14] 2025-06-05 01:46:54,767 | INFO     | cat /etc/os-release:
[2025-06-05 03:47:14] NAME="CentOS Linux"
[2025-06-05 03:47:14] VERSION="7 (Core)"
[2025-06-05 03:47:14] ID="centos"
[2025-06-05 03:47:14] ID_LIKE="rhel fedora"
[2025-06-05 03:47:14] VERSION_ID="7"
[2025-06-05 03:47:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 03:47:14] ANSI_COLOR="0;31"
[2025-06-05 03:47:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 03:47:14] HOME_URL="https://www.centos.org/"
[2025-06-05 03:47:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 03:47:14] 
[2025-06-05 03:47:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 03:47:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 03:47:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 03:47:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 03:47:14] 
[2025-06-05 03:47:14] 2025-06-05 01:46:54,767 | INFO     | **************************************
[2025-06-05 03:47:14] 2025-06-05 01:46:55,270 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2025-06-05 03:47:14] 2025-06-05 01:46:55,294 | INFO     | sufficient remaining disk space (3292395470848 B)
[2025-06-05 03:47:14] 2025-06-05 01:46:55,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 03:47:14] 2025-06-05 01:46:55,294 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 03:47:14] 2025-06-05 01:46:55,295 | INFO     | update_server=False
[2025-06-05 03:47:14] 2025-06-05 01:46:55,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 03:47:14] 2025-06-05 01:46:55,295 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 03:47:14] 2025-06-05 01:46:55,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 03:47:14] 2025-06-05 01:46:55,663 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 03:47:14] 2025-06-05 01:46:55,663 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 03:47:14] 2025-06-05 01:46:55,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:47:14] 2025-06-05 01:46:55,663 | INFO     | will abort loop
[2025-06-05 03:47:14] 2025-06-05 01:46:55,733 | INFO     | all payload control threads have been joined
[2025-06-05 03:47:14] 2025-06-05 01:46:55,737 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 03:47:14] 2025-06-05 01:46:55,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 03:47:14] 2025-06-05 01:46:55,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 03:47:14] 2025-06-05 01:46:56,107 | INFO     | all job control threads have been joined
[2025-06-05 03:47:14] 2025-06-05 01:46:56,214 | INFO     | all data control threads have been joined
[2025-06-05 03:47:14] 2025-06-05 01:46:56,300 | INFO     | [job] retrieve thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:56,611 | INFO     | [data] copytool_in thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:56,669 | INFO     | [job] job monitor thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:56,738 | INFO     | [payload] control thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:57,112 | INFO     | [job] control thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:57,142 | INFO     | [job] validate thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:57,209 | INFO     | [payload] validate_post thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:57,220 | INFO     | [data] control thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:57,301 | INFO     | [data] copytool_out thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:57,455 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:57,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 03:47:14] 2025-06-05 01:46:57,611 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:57,638 | INFO     | [payload] failed_post thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:57,726 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:58,531 | INFO     | [job] queue monitor thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:46:59,647 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:47:06,122 | INFO     | job.realtimelogging is not enabled
[2025-06-05 03:47:14] 2025-06-05 01:47:07,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 03:47:14] 2025-06-05 01:47:08,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22475291514688)>', '<ExcThread(monitor, started 22475052119808)>']
[2025-06-05 03:47:14] 2025-06-05 01:47:09,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 03:47:14] 2025-06-05 01:47:09,808 | INFO     | [monitor] control thread has ended
[2025-06-05 03:47:14] 2025-06-05 01:47:13,893 | INFO     | all workflow threads have been joined
[2025-06-05 03:47:14] 2025-06-05 01:47:13,893 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 03:47:14] 2025-06-05 01:47:13,893 | INFO     | traces error code: 0
[2025-06-05 03:47:14] 2025-06-05 01:47:13,893 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 03:47:14] 2025-06-05 01:47:14,038 [wrapper] ==== pilot stdout END ====
[2025-06-05 03:47:14] 2025-06-05 01:47:14,043 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 03:47:14] 2025-06-05 01:47:14,047 [wrapper] pilotpid: 1232598
[2025-06-05 03:47:14] 2025-06-05 01:47:14,052 [wrapper] Pilot exit status: 0
[2025-06-05 03:47:14] 2025-06-05 01:47:14,067 [wrapper] pandaids: 6677574186
[2025-06-05 03:47:14] 2025-06-05 01:47:14,229 [wrapper] cleanup supervisor_pilot 1873526 1232599
[2025-06-05 03:47:14] 2025-06-05 01:47:14,234 [wrapper] Test setup, not cleaning
[2025-06-05 03:47:14] 2025-06-05 01:47:14,239 [wrapper] apfmon messages muted
[2025-06-05 03:47:14] 2025-06-05 01:47:14,242 [wrapper] ==== wrapper stdout END ====
[2025-06-05 03:47:14] 2025-06-05 01:47:14,248 [wrapper] ==== wrapper stderr END ====
[2025-06-05 03:47:14]  *** Error codes and diagnostics ***
[2025-06-05 03:47:14]     "exeErrorCode": 0,
[2025-06-05 03:47:14]     "exeErrorDiag": "",
[2025-06-05 03:47:14]     "pilotErrorCode": 0,
[2025-06-05 03:47:14]     "pilotErrorDiag": "",
[2025-06-05 03:47:14]  *** Listing of results directory ***
[2025-06-05 03:47:14] total 388364
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc    495897 Jun  3 11:56 pilot3.tar.gz
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc      5111 Jun  3 12:12 queuedata.json
[2025-06-05 03:47:14] -rwx------ 1 boinc boinc     37140 Jun  3 12:13 runpilot2-wrapper.sh
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc       100 Jun  5 01:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 03:47:14] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 01:29 run_atlas
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc       105 Jun  5 01:29 job.xml
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc      6685 Jun  5 01:30 init_data.xml
[2025-06-05 03:47:14] -rw-r--r-- 2 boinc boinc 216111843 Jun  5 01:30 EVNT.45006593._001142.pool.root.1
[2025-06-05 03:47:14] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:30 start_atlas.sh
[2025-06-05 03:47:14] drwxrwx--x 2 boinc boinc      4096 Jun  5 01:30 shared
[2025-06-05 03:47:14] -rw-r--r-- 2 boinc boinc    508878 Jun  5 01:30 input.tar.gz
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc         0 Jun  5 01:30 boinc_lockfile
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc      2525 Jun  5 01:30 pandaJob.out
[2025-06-05 03:47:14] -rw------- 1 boinc boinc    987117 Jun  5 01:30 agis_schedconf.cvmfs.json
[2025-06-05 03:47:14] -rw------- 1 boinc boinc   1598969 Jun  5 01:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 03:47:14] drwx------ 4 boinc boinc      4096 Jun  5 01:30 pilot3
[2025-06-05 03:47:14] -rw------- 1 boinc boinc 175655839 Jun  5 03:46 HITS.45006595._028556.pool.root.1
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc       529 Jun  5 03:46 boinc_task_state.xml
[2025-06-05 03:47:14] -rw------- 1 boinc boinc      1027 Jun  5 03:46 memory_monitor_summary.json
[2025-06-05 03:47:14] -rw------- 1 boinc boinc    269676 Jun  5 03:46 log.45006595._028556.job.log.tgz.1
[2025-06-05 03:47:14] -rw------- 1 boinc boinc      7709 Jun  5 03:46 heartbeat.json
[2025-06-05 03:47:14] -rw------- 1 boinc boinc        95 Jun  5 03:46 pilot_heartbeat.json
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc      8192 Jun  5 03:47 boinc_mmap_file
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc        27 Jun  5 03:47 wrapper_checkpoint.txt
[2025-06-05 03:47:14] -rw------- 1 boinc boinc      4622 Jun  5 03:47 pilotlog.txt
[2025-06-05 03:47:14] -rw------- 1 boinc boinc    773694 Jun  5 03:47 log.45006595._028556.job.log.1
[2025-06-05 03:47:14] -rw------- 1 boinc boinc       357 Jun  5 03:47 output.list
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc       620 Jun  5 03:47 runtime_log
[2025-06-05 03:47:14] -rw------- 1 boinc boinc   1064960 Jun  5 03:47 result.tar.gz
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc      9025 Jun  5 03:47 runtime_log.err
[2025-06-05 03:47:14] -rw------- 1 boinc boinc       662 Jun  5 03:47 dTsLDmfpdg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfQjKDmjqvvKn.diag
[2025-06-05 03:47:14] -rw-r--r-- 1 boinc boinc     20925 Jun  5 03:47 stderr.txt
[2025-06-05 03:47:14] HITS file was successfully produced:
[2025-06-05 03:47:14] -rw------- 1 boinc boinc 175655839 Jun  5 03:46 shared/HITS.pool.root.1
[2025-06-05 03:47:14]  *** Contents of shared directory: ***
[2025-06-05 03:47:14] total 384152
[2025-06-05 03:47:14] -rw-r--r-- 2 boinc boinc 216111843 Jun  5 01:30 ATLAS.root_0
[2025-06-05 03:47:14] -rw-r--r-- 2 boinc boinc     15093 Jun  5 01:30 start_atlas.sh
[2025-06-05 03:47:14] -rw-r--r-- 2 boinc boinc    508878 Jun  5 01:30 input.tar.gz
[2025-06-05 03:47:14] -rw------- 1 boinc boinc 175655839 Jun  5 03:46 HITS.pool.root.1
[2025-06-05 03:47:14] -rw------- 1 boinc boinc   1064960 Jun  5 03:47 result.tar.gz
03:47:16 (1228596): run_atlas exited; CPU time 31356.839818
03:47:16 (1228596): called boinc_finish(0)

</stderr_txt>
]]>

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