Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:31:22 (25207): wrapper (7.7.26015): starting
23:31:22 (25207): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:31:22] Arguments: --nthreads 8
[2025-06-03 23:31:22] Threads: 8
[2025-06-03 23:31:22] Checking for CVMFS
[2025-06-03 23:31:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:31:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:31:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:31:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:31:24] 2.11.2.0 31978 32423 90160 146755 3 113 23825605 25165824 3959 130560 0 17274727 99.813 18814129 2496 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 23:31:24] CVMFS is ok
[2025-06-03 23:31:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:31:24] Checking for apptainer binary...
[2025-06-03 23:31:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:31:24] Running /usr/bin/apptainer --version
[2025-06-03 23:31:24] apptainer version 1.3.2-1.el7
[2025-06-03 23:31:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:31:30] INFO: fuse-overlayfs mount took an unexpectedly long time: 2.1s cg-vwn266.simple-grid.lan
[2025-06-03 23:31:30] apptainer works
[2025-06-03 23:31:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:31:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:31:31] Starting ATLAS job with PandaID=6677574118
[2025-06-03 23:31:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:11:34]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:11:34] 2025-06-04 01:22:38,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:34] 2025-06-04 01:22:38,920 | INFO     | PID=29444 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 05:11:34] 2025-06-04 01:22:38,921 | INFO     | .. there are 9 such processes running
[2025-06-04 05:11:34] 2025-06-04 01:22:40,609 | INFO     | monitor loop #937: job 0:6677574118 is in state 'finished'
[2025-06-04 05:11:34] 2025-06-04 01:22:40,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:34] 2025-06-04 01:22:43,114 | INFO     | monitor loop #938: job 0:6677574118 is in state 'finished'
[2025-06-04 05:11:34] 2025-06-04 01:22:43,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:11:34] 2025-06-04 01:22:44,497 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:11:34] 2025-06-04 01:22:44,498 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6677574118/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:11:34] 2025-06-04 01:22:44,499 | INFO     | extracted standard info from prmon json
[2025-06-04 05:11:34] 2025-06-04 01:22:44,499 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:11:34] 2025-06-04 01:22:44,499 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:11:34] 2025-06-04 01:22:44,499 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:11:34] 2025-06-04 01:22:44,499 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:11:34] 2025-06-04 01:22:44,504 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:11:34] 2025-06-04 01:22:44,505 | INFO     | sum of square deviations: 3579276412.5
[2025-06-04 05:11:34] 2025-06-04 01:22:44,507 | INFO     | sum of deviations: 17436041139.999996
[2025-06-04 05:11:34] 2025-06-04 01:22:44,507 | INFO     | mean x: 1748993236.5
[2025-06-04 05:11:34] 2025-06-04 01:22:44,507 | INFO     | mean y: 2485943.1415929203
[2025-06-04 05:11:34] 2025-06-04 01:22:44,507 | INFO     | -- intersect: -8517537243.303425
[2025-06-04 05:11:34] 2025-06-04 01:22:44,507 | INFO     | intersect: -8517537243.303425
[2025-06-04 05:11:34] 2025-06-04 01:22:44,508 | INFO     | chi2: 1.7881960204585252
[2025-06-04 05:11:34] 2025-06-04 01:22:44,508 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,510 | INFO     | sum of deviations: 16744869721.0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,510 | INFO     | mean x: 1748993084.0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,511 | INFO     | mean y: 2485492.2443438913
[2025-06-04 05:11:34] 2025-06-04 01:22:44,511 | INFO     | -- intersect: -8747825979.066212
[2025-06-04 05:11:34] 2025-06-04 01:22:44,511 | INFO     | intersect: -8747825979.066212
[2025-06-04 05:11:34] 2025-06-04 01:22:44,511 | INFO     | chi2: 1.7887330934450458
[2025-06-04 05:11:34] 2025-06-04 01:22:44,511 | INFO     | current chi2=1.7887330934450458 (change=-0.030034346367849525 %)
[2025-06-04 05:11:34] 2025-06-04 01:22:44,511 | INFO     | right removable region: 220
[2025-06-04 05:11:34] 2025-06-04 01:22:44,512 | INFO     | sum of square deviations: 3346927870.0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,514 | INFO     | sum of deviations: -21715558116.0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,514 | INFO     | mean x: 1748993389.0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,514 | INFO     | mean y: 2511424.2488687783
[2025-06-04 05:11:34] 2025-06-04 01:22:44,514 | INFO     | -- intersect: 11350341153.047085
[2025-06-04 05:11:34] 2025-06-04 01:22:44,514 | INFO     | intersect: 11350341153.047085
[2025-06-04 05:11:34] 2025-06-04 01:22:44,515 | INFO     | chi2: 0.15054605897274737
[2025-06-04 05:11:34] 2025-06-04 01:22:44,515 | INFO     | current chi2=0.15054605897274737 (change=91.5811210152372 %)
[2025-06-04 05:11:34] 2025-06-04 01:22:44,515 | INFO     | sum of square deviations: 3124858590.0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,517 | INFO     | sum of deviations: -19674376512.500008
[2025-06-04 05:11:34] 2025-06-04 01:22:44,517 | INFO     | mean x: 1748993541.5
[2025-06-04 05:11:34] 2025-06-04 01:22:44,517 | INFO     | mean y: 2509985.8657407407
[2025-06-04 05:11:34] 2025-06-04 01:22:44,518 | INFO     | -- intersect: 11014322668.69239
[2025-06-04 05:11:34] 2025-06-04 01:22:44,518 | INFO     | intersect: 11014322668.69239
[2025-06-04 05:11:34] 2025-06-04 01:22:44,518 | INFO     | chi2: 0.13715467047977056
[2025-06-04 05:11:34] 2025-06-04 01:22:44,518 | INFO     | current chi2=0.13715467047977056 (change=8.895210266115955 %)
[2025-06-04 05:11:34] 2025-06-04 01:22:44,518 | INFO     | left removable region: 20
[2025-06-04 05:11:34] 2025-06-04 01:22:44,519 | INFO     | sum of square deviations: 2480604650.0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,520 | INFO     | sum of deviations: -4615253656.0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,520 | INFO     | mean x: 1748993663.5
[2025-06-04 05:11:34] 2025-06-04 01:22:44,520 | INFO     | mean y: 2498527.5
[2025-06-04 05:11:34] 2025-06-04 01:22:44,520 | INFO     | -- intersect: 3256563781.2232037
[2025-06-04 05:11:34] 2025-06-04 01:22:44,521 | INFO     | intersect: 3256563781.2232037
[2025-06-04 05:11:34] 2025-06-04 01:22:44,521 | INFO     | chi2: 0.06878355997317706
[2025-06-04 05:11:34] 2025-06-04 01:22:44,521 | INFO     | -- intersect: 3256563781.2232037
[2025-06-04 05:11:34] 2025-06-04 01:22:44,521 | INFO     | current memory leak: -1.86 B/s (using 200 data points, chi2=0.07)
[2025-06-04 05:11:34] 2025-06-04 01:22:44,522 | INFO     | ..............................
[2025-06-04 05:11:34] 2025-06-04 01:22:44,522 | INFO     | . Timing measurements:
[2025-06-04 05:11:34] 2025-06-04 01:22:44,522 | INFO     | . get job = 0 s
[2025-06-04 05:11:34] 2025-06-04 01:22:44,522 | INFO     | . initial setup = 2 s
[2025-06-04 05:11:34] 2025-06-04 01:22:44,522 | INFO     | . payload setup = 15 s
[2025-06-04 05:11:34] 2025-06-04 01:22:44,522 | INFO     | . stage-in = 0 s
[2025-06-04 05:11:34] 2025-06-04 01:22:44,522 | INFO     | . payload execution = 13782 s
[2025-06-04 05:11:34] 2025-06-04 01:22:44,523 | INFO     | . stage-out = 2 s
[2025-06-04 05:11:34] 2025-06-04 01:22:44,523 | INFO     | . log creation = 0 s
[2025-06-04 05:11:34] 2025-06-04 01:22:44,523 | INFO     | ..............................
[2025-06-04 05:11:34] 2025-06-04 01:22:44,888 | INFO     | 
[2025-06-04 05:11:34] 2025-06-04 01:22:44,888 | INFO     | job summary report
[2025-06-04 05:11:34] 2025-06-04 01:22:44,888 | INFO     | --------------------------------------------------
[2025-06-04 05:11:34] 2025-06-04 01:22:44,888 | INFO     | PanDA job id: 6677574118
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | task id: 45006595
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | errors: (none)
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | pilot state: finished 
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | transexitcode: 0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | exeerrorcode: 0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | exeerrordiag: 
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | exitcode: 0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | exitmsg: OK
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | cpuconsumptiontime: 51860 s
[2025-06-04 05:11:34] 2025-06-04 01:22:44,889 | INFO     | nevents: 400
[2025-06-04 05:11:34] 2025-06-04 01:22:44,890 | INFO     | neventsw: 0
[2025-06-04 05:11:34] 2025-06-04 01:22:44,890 | INFO     | pid: 5654
[2025-06-04 05:11:34] 2025-06-04 01:22:44,890 | INFO     | pgrp: 5654
[2025-06-04 05:11:34] 2025-06-04 01:22:44,890 | INFO     | corecount: 8
[2025-06-04 05:11:34] 2025-06-04 01:22:44,890 | INFO     | event service: False
[2025-06-04 05:11:34] 2025-06-04 01:22:44,890 | INFO     | sizes: {0: 2405013, 1: 2405212, 12: 2405446, 13801: 2435037, 13802: 2435036, 13805: 2444033, 13808: 2444217, 13829: 2444387}
[2025-06-04 05:11:34] 2025-06-04 01:22:44,890 | INFO     | --------------------------------------------------
[2025-06-04 05:11:34] 2025-06-04 01:22:44,890 | INFO     | 
[2025-06-04 05:11:34] 2025-06-04 01:22:44,890 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-04 05:11:34] 2025-06-04 01:22:44,914 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,915 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,915 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:11:34] 2025-06-04 01:22:44,917 | INFO     | job 6677574118 has completed (purged errors)
[2025-06-04 05:11:34] 2025-06-04 01:22:44,917 | INFO     | overall cleanup function is called
[2025-06-04 05:11:34] 2025-06-04 01:22:45,924 | INFO     | --- collectZombieJob: --- 10, [5654]
[2025-06-04 05:11:34] 2025-06-04 01:22:45,924 | INFO     | zombie collector waiting for pid 5654
[2025-06-04 05:11:34] 2025-06-04 01:22:45,924 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:11:34] 2025-06-04 01:22:45,925 | INFO     | collected zombie processes
[2025-06-04 05:11:34] 2025-06-04 01:22:45,925 | INFO     | will attempt to kill all subprocesses of pid=5654
[2025-06-04 05:11:34] 2025-06-04 01:22:46,025 | INFO     | process IDs to be killed: [5654] (in reverse order)
[2025-06-04 05:11:34] 2025-06-04 01:22:46,118 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:11:34] 2025-06-04 01:22:46,118 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:11:34] 2025-06-04 01:22:46,121 | INFO     | did not find any defunct processes belonging to 5654
[2025-06-04 05:11:34] 2025-06-04 01:22:46,124 | INFO     | did not find any defunct processes belonging to 5654
[2025-06-04 05:11:34] 2025-06-04 01:22:46,124 | INFO     | ready for new job
[2025-06-04 05:11:34] 2025-06-04 01:22:46,124 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:11:34] 2025-06-04 01:22:46,127 | INFO     | **************************************
[2025-06-04 05:11:34] 2025-06-04 01:22:46,127 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:11:34] 2025-06-04 01:22:46,127 | INFO     | **************************************
[2025-06-04 05:11:34] 2025-06-04 01:22:46,127 | INFO     | 
[2025-06-04 05:11:34] 2025-06-04 01:22:46,128 | INFO     | pilot is running in a VM
[2025-06-04 05:11:34] 2025-06-04 01:22:46,128 | INFO     | architecture information:
[2025-06-04 05:11:34] 2025-06-04 01:22:46,129 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:11:34] 2025-06-04 01:22:46,150 | INFO     | cat /etc/os-release:
[2025-06-04 05:11:34] NAME="CentOS Linux"
[2025-06-04 05:11:34] VERSION="7 (Core)"
[2025-06-04 05:11:34] ID="centos"
[2025-06-04 05:11:34] ID_LIKE="rhel fedora"
[2025-06-04 05:11:34] VERSION_ID="7"
[2025-06-04 05:11:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:11:34] ANSI_COLOR="0;31"
[2025-06-04 05:11:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:11:34] HOME_URL="https://www.centos.org/"
[2025-06-04 05:11:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:11:34] 
[2025-06-04 05:11:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:11:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:11:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:11:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:11:34] 
[2025-06-04 05:11:34] 2025-06-04 01:22:46,150 | INFO     | **************************************
[2025-06-04 05:11:34] 2025-06-04 01:22:46,737 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-04 05:11:34] 2025-06-04 01:22:46,803 | INFO     | sufficient remaining disk space (496971546624 B)
[2025-06-04 05:11:34] 2025-06-04 01:22:46,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:11:34] 2025-06-04 01:22:46,804 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:11:34] 2025-06-04 01:22:46,804 | INFO     | update_server=False
[2025-06-04 05:11:34] 2025-06-04 01:22:46,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:11:34] 2025-06-04 01:22:46,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:11:34] 2025-06-04 01:22:46,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:11:34] 2025-06-04 01:22:46,805 | INFO     | aborting loop
[2025-06-04 05:11:34] 2025-06-04 01:22:46,919 | INFO     | all payload control threads have been joined
[2025-06-04 05:11:34] 2025-06-04 01:22:46,949 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:11:34] 2025-06-04 01:22:46,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:11:34] 2025-06-04 01:22:46,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:11:34] 2025-06-04 01:22:47,442 | INFO     | all job control threads have been joined
[2025-06-04 05:11:34] 2025-06-04 01:22:47,485 | INFO     | all data control threads have been joined
[2025-06-04 05:11:34] 2025-06-04 01:22:47,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:11:34] 2025-06-04 01:22:47,810 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:47,811 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:47,925 | INFO     | [payload] control thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,208 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,227 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,353 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,364 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,448 | INFO     | [job] control thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,491 | INFO     | [data] control thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,715 | INFO     | [job] validate thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,790 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,811 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,898 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:48,976 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:49,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:11:34] 2025-06-04 01:22:50,676 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:51,520 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:11:34] 2025-06-04 01:22:52,227 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732748490560)>', '<ExcThread(monitor, started 139732298217216)>']
[2025-06-04 05:11:34] 2025-06-04 01:22:52,984 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:11:34] 2025-06-04 01:22:52,984 | INFO     | [monitor] control thread has ended
[2025-06-04 05:11:34] 2025-06-04 01:22:57,253 | INFO     | all workflow threads have been joined
[2025-06-04 05:11:34] 2025-06-04 01:22:57,253 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:11:34] 2025-06-04 01:22:57,254 | INFO     | traces error code: 0
[2025-06-04 05:11:34] 2025-06-04 01:22:57,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:11:34] 2025-06-04 01:22:57,549 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:11:34] 2025-06-04 01:22:57,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:11:34] 2025-06-04 01:22:57,753 [wrapper] pilotpid: 29444
[2025-06-04 05:11:34] 2025-06-04 01:22:57,825 [wrapper] Pilot exit status: 0
[2025-06-04 05:11:34] 2025-06-04 01:22:58,408 [wrapper] pandaids: 6677574118
[2025-06-04 05:11:34] 2025-06-04 01:22:58,825 [wrapper] cleanup supervisor_pilot 15447 29445
[2025-06-04 05:11:34] 2025-06-04 01:22:58,956 [wrapper] Test setup, not cleaning
[2025-06-04 05:11:34] 2025-06-04 01:22:58,972 [wrapper] apfmon messages muted
[2025-06-04 05:11:34] 2025-06-04 01:22:58,977 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:11:34] 2025-06-04 01:22:58,980 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:11:34]  *** Error codes and diagnostics ***
[2025-06-04 05:11:34]     "exeErrorCode": 0,
[2025-06-04 05:11:34]     "exeErrorDiag": "",
[2025-06-04 05:11:34]     "pilotErrorCode": 0,
[2025-06-04 05:11:34]     "pilotErrorDiag": "",
[2025-06-04 05:11:34]  *** Listing of results directory ***
[2025-06-04 05:11:34] total 394204
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc    495897 Jun  3 11:56 pilot3.tar.gz
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc      5111 Jun  3 12:09 queuedata.json
[2025-06-04 05:11:34] -rwx------. 1 boinc boinc     37140 Jun  3 12:10 runpilot2-wrapper.sh
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc       100 Jun  3 23:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:11:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 23:31 run_atlas
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc       105 Jun  3 23:31 job.xml
[2025-06-04 05:11:34] -rw-r--r--. 2 boinc boinc 214928111 Jun  3 23:31 EVNT.45006593._001139.pool.root.1
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc      6391 Jun  3 23:31 init_data.xml
[2025-06-04 05:11:34] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:31 start_atlas.sh
[2025-06-04 05:11:34] drwxrwx--x. 2 boinc boinc        68 Jun  3 23:31 shared
[2025-06-04 05:11:34] -rw-r--r--. 2 boinc boinc    508883 Jun  3 23:31 input.tar.gz
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc         0 Jun  3 23:31 boinc_lockfile
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc      2525 Jun  3 23:31 pandaJob.out
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc    986853 Jun  3 23:31 agis_schedconf.cvmfs.json
[2025-06-04 05:11:34] drwx------. 4 boinc boinc      4096 Jun  3 23:31 pilot3
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc 181759462 Jun  4 03:21 HITS.45006595._028488.pool.root.1
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc       531 Jun  4 03:21 boinc_task_state.xml
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc      1021 Jun  4 03:22 memory_monitor_summary.json
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc   1603667 Jun  4 03:22 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc    386025 Jun  4 03:22 log.45006595._028488.job.log.tgz.1
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc        95 Jun  4 03:22 pilot_heartbeat.json
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc      7685 Jun  4 03:22 heartbeat.json
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc      4416 Jun  4 03:22 pilotlog.txt
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc   1188156 Jun  4 03:22 log.45006595._028488.job.log.1
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc       357 Jun  4 03:23 output.list
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc       620 Jun  4 03:23 runtime_log
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc   1597440 Jun  4 03:23 result.tar.gz
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc      8659 Jun  4 03:23 runtime_log.err
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc       657 Jun  4 03:23 DhMODmBmdg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqPjKDmP1AOGn.diag
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc      8192 Jun  4 05:11 boinc_mmap_file
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc        28 Jun  4 05:11 wrapper_checkpoint.txt
[2025-06-04 05:11:34] -rw-r--r--. 1 boinc boinc     20868 Jun  4 05:11 stderr.txt
[2025-06-04 05:11:34] HITS file was successfully produced:
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc 181759462 Jun  4 03:21 shared/HITS.pool.root.1
[2025-06-04 05:11:34]  *** Contents of shared directory: ***
[2025-06-04 05:11:34] total 389468
[2025-06-04 05:11:34] -rw-r--r--. 2 boinc boinc 214928111 Jun  3 23:31 ATLAS.root_0
[2025-06-04 05:11:34] -rw-r--r--. 2 boinc boinc     15093 Jun  3 23:31 start_atlas.sh
[2025-06-04 05:11:34] -rw-r--r--. 2 boinc boinc    508883 Jun  3 23:31 input.tar.gz
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc 181759462 Jun  4 03:21 HITS.pool.root.1
[2025-06-04 05:11:34] -rw-------. 1 boinc boinc   1597440 Jun  4 03:23 result.tar.gz
05:11:36 (25207): run_atlas exited; CPU time 52039.298763
05:11:36 (25207): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN