Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
16:31:44 (315944): wrapper (7.7.26015): starting
16:31:44 (315944): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 16:31:44] Arguments: --nthreads 8
[2025-06-03 16:31:44] Threads: 8
[2025-06-03 16:31:44] Checking for CVMFS
[2025-06-03 16:31:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 16:31:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 16:31:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 16:31:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 16:31:44] 2.12.7.0 20002 1068 57696 146749 2 56 3461737 4096000 0 130560 0 818560 99.990 306769 9259 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-03 16:31:44] CVMFS is ok
[2025-06-03 16:31:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 16:31:44] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-03 16:31:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-03 16:31:44] Further information can be found at the LHC@home message board.
[2025-06-03 16:31:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 16:31:44] Checking for apptainer binary...
[2025-06-03 16:31:44] apptainer is not installed, using version from CVMFS
[2025-06-03 16:31:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 16:31:45] vm-zhiwei-ec8ce3
[2025-06-03 16:31:45] apptainer works
[2025-06-03 16:31:45] Set ATHENA_PROC_NUMBER=8
[2025-06-03 16:31:45] Set ATHENA_CORE_NUMBER=8
[2025-06-03 16:31:45] Starting ATLAS job with PandaID=6677572225
[2025-06-03 16:31:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 18:11:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 18:11:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 18:11:40]  replicas=None
[2025-06-03 18:11:40]  scope=mc23_13p6TeV
[2025-06-03 18:11:40]  status=None
[2025-06-03 18:11:40]  status_code=0
[2025-06-03 18:11:40]  storage_token=
[2025-06-03 18:11:40]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6677572225/log.45006595._028383.job.log.tgz.1
[2025-06-03 18:11:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/c1/log.45006595._028383.job.log.tgz.1
[2025-06-03 18:11:40]  workdir=None
[2025-06-03 18:11:40] ]
[2025-06-03 18:11:40] 2025-06-03 18:11:08,817 | INFO     | transferring file log.45006595._028383.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6677572225/log.45006595._028383.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-03 18:11:40] 2025-06-03 18:11:08,817 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6677572225/log.45006595._028383.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._028383.job
[2025-06-03 18:11:40] 2025-06-03 18:11:08,841 | INFO     | adding to output.list: log.45006595._028383.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/11/c1/log.45006595._028383.job.log.tg
[2025-06-03 18:11:40] 2025-06-03 18:11:08,842 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 18:11:40] 2025-06-03 18:11:08,842 | INFO     | summary of transferred files:
[2025-06-03 18:11:40] 2025-06-03 18:11:08,842 | INFO     |  -- lfn=log.45006595._028383.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 18:11:40] 2025-06-03 18:11:08,842 | INFO     | stage-out finished correctly
[2025-06-03 18:11:40] 2025-06-03 18:11:09,303 | INFO     | monitor loop #437: job 0:6677572225 is in state 'finished'
[2025-06-03 18:11:40] 2025-06-03 18:11:09,304 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:11:40] 2025-06-03 18:11:11,088 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 18:11:40] 2025-06-03 18:11:11,807 | INFO     | monitor loop #438: job 0:6677572225 is in state 'finished'
[2025-06-03 18:11:40] 2025-06-03 18:11:11,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:11:40] 2025-06-03 18:11:14,077 | INFO     | job 6677572225 has state=finished
[2025-06-03 18:11:40] 2025-06-03 18:11:14,078 | INFO     | preparing for final server update for job 6677572225 in state='finished'
[2025-06-03 18:11:40] 2025-06-03 18:11:14,079 | INFO     | this job has now completed (state=finished)
[2025-06-03 18:11:40] 2025-06-03 18:11:14,080 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 18:11:40] 2025-06-03 18:11:14,080 | INFO     | log transfer has been attempted: DONE
[2025-06-03 18:11:40] 2025-06-03 18:11:14,080 | INFO     | job 6677572225 has finished - writing final server update
[2025-06-03 18:11:40] 2025-06-03 18:11:14,081 | INFO     | total number of processed events: 400 (read)
[2025-06-03 18:11:40] 2025-06-03 18:11:14,090 | INFO     | executing command: lscpu
[2025-06-03 18:11:40] 2025-06-03 18:11:14,140 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 18:11:40] 2025-06-03 18:11:14,311 | INFO     | monitor loop #439: job 0:6677572225 is in state 'finished'
[2025-06-03 18:11:40] 2025-06-03 18:11:14,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:11:40] 2025-06-03 18:11:16,815 | INFO     | monitor loop #440: job 0:6677572225 is in state 'finished'
[2025-06-03 18:11:40] 2025-06-03 18:11:16,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:11:40] 2025-06-03 18:11:16,985 | INFO     | PID=319620 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-03 18:11:40] 2025-06-03 18:11:19,319 | INFO     | monitor loop #441: job 0:6677572225 is in state 'finished'
[2025-06-03 18:11:40] 2025-06-03 18:11:19,320 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 18:11:40] 2025-06-03 18:11:19,961 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 18:11:40] 2025-06-03 18:11:19,962 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6677572225/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 18:11:40] 2025-06-03 18:11:19,963 | INFO     | extracted standard info from prmon json
[2025-06-03 18:11:40] 2025-06-03 18:11:19,964 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 18:11:40] 2025-06-03 18:11:19,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 18:11:40] 2025-06-03 18:11:19,965 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 18:11:40] 2025-06-03 18:11:19,965 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 18:11:40] 2025-06-03 18:11:19,969 | INFO     | fitting pss+swap vs Time
[2025-06-03 18:11:40] 2025-06-03 18:11:19,969 | INFO     | sum of square deviations: 226022842.5
[2025-06-03 18:11:40] 2025-06-03 18:11:19,970 | INFO     | sum of deviations: -24357885752.5
[2025-06-03 18:11:40] 2025-06-03 18:11:19,971 | INFO     | mean x: 1748971383.5
[2025-06-03 18:11:40] 2025-06-03 18:11:19,971 | INFO     | mean y: 2705547.988888889
[2025-06-03 18:11:40] 2025-06-03 18:11:19,971 | INFO     | -- intersect: 188484739808.2423
[2025-06-03 18:11:40] 2025-06-03 18:11:19,971 | INFO     | intersect: 188484739808.2423
[2025-06-03 18:11:40] 2025-06-03 18:11:19,972 | INFO     | chi2: 0.16913449751884208
[2025-06-03 18:11:40] 2025-06-03 18:11:19,972 | INFO     | -- intersect: 188484739808.2423
[2025-06-03 18:11:40] 2025-06-03 18:11:19,973 | INFO     | current memory leak: -107.77 B/s (using 90 data points, chi2=0.17)
[2025-06-03 18:11:40] 2025-06-03 18:11:19,974 | INFO     | ..............................
[2025-06-03 18:11:40] 2025-06-03 18:11:19,974 | INFO     | . Timing measurements:
[2025-06-03 18:11:40] 2025-06-03 18:11:19,974 | INFO     | . get job = 0 s
[2025-06-03 18:11:40] 2025-06-03 18:11:19,974 | INFO     | . initial setup = 4 s
[2025-06-03 18:11:40] 2025-06-03 18:11:19,975 | INFO     | . payload setup = 14 s
[2025-06-03 18:11:40] 2025-06-03 18:11:19,975 | INFO     | . stage-in = 0 s
[2025-06-03 18:11:40] 2025-06-03 18:11:19,975 | INFO     | . payload execution = 5904 s
[2025-06-03 18:11:40] 2025-06-03 18:11:19,975 | INFO     | . stage-out = 0 s
[2025-06-03 18:11:40] 2025-06-03 18:11:19,976 | INFO     | . log creation = 0 s
[2025-06-03 18:11:40] 2025-06-03 18:11:19,976 | INFO     | ..............................
[2025-06-03 18:11:40] 2025-06-03 18:11:20,069 | INFO     | 
[2025-06-03 18:11:40] 2025-06-03 18:11:20,069 | INFO     | job summary report
[2025-06-03 18:11:40] 2025-06-03 18:11:20,069 | INFO     | --------------------------------------------------
[2025-06-03 18:11:40] 2025-06-03 18:11:20,069 | INFO     | PanDA job id: 6677572225
[2025-06-03 18:11:40] 2025-06-03 18:11:20,070 | INFO     | task id: 45006595
[2025-06-03 18:11:40] 2025-06-03 18:11:20,070 | INFO     | errors: (none)
[2025-06-03 18:11:40] 2025-06-03 18:11:20,070 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 18:11:40] 2025-06-03 18:11:20,071 | INFO     | pilot state: finished 
[2025-06-03 18:11:40] 2025-06-03 18:11:20,071 | INFO     | transexitcode: 0
[2025-06-03 18:11:40] 2025-06-03 18:11:20,071 | INFO     | exeerrorcode: 0
[2025-06-03 18:11:40] 2025-06-03 18:11:20,072 | INFO     | exeerrordiag: 
[2025-06-03 18:11:40] 2025-06-03 18:11:20,072 | INFO     | exitcode: 0
[2025-06-03 18:11:40] 2025-06-03 18:11:20,072 | INFO     | exitmsg: OK
[2025-06-03 18:11:40] 2025-06-03 18:11:20,072 | INFO     | cpuconsumptiontime: 43396 s
[2025-06-03 18:11:40] 2025-06-03 18:11:20,073 | INFO     | nevents: 400
[2025-06-03 18:11:40] 2025-06-03 18:11:20,073 | INFO     | neventsw: 0
[2025-06-03 18:11:40] 2025-06-03 18:11:20,073 | INFO     | pid: 326152
[2025-06-03 18:11:40] 2025-06-03 18:11:20,074 | INFO     | pgrp: 326152
[2025-06-03 18:11:40] 2025-06-03 18:11:20,074 | INFO     | corecount: 8
[2025-06-03 18:11:40] 2025-06-03 18:11:20,075 | INFO     | event service: False
[2025-06-03 18:11:40] 2025-06-03 18:11:20,075 | INFO     | sizes: {0: 2405013, 1: 2405212, 8: 2405418, 12: 2405446, 5922: 2431912, 5923: 2440853, 5925: 2441037, 5934: 2441207}
[2025-06-03 18:11:40] 2025-06-03 18:11:20,075 | INFO     | --------------------------------------------------
[2025-06-03 18:11:40] 2025-06-03 18:11:20,076 | INFO     | 
[2025-06-03 18:11:40] 2025-06-03 18:11:20,076 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-03 18:11:40] 2025-06-03 18:11:20,112 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,113 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,113 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,117 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,118 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 18:11:40] 2025-06-03 18:11:20,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,119 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 18:11:40] 2025-06-03 18:11:20,119 | INFO     | job 6677572225 has completed (purged errors)
[2025-06-03 18:11:40] 2025-06-03 18:11:20,120 | INFO     | overall cleanup function is called
[2025-06-03 18:11:40] 2025-06-03 18:11:21,132 | INFO     | --- collectZombieJob: --- 10, [326152]
[2025-06-03 18:11:40] 2025-06-03 18:11:21,132 | INFO     | zombie collector waiting for pid 326152
[2025-06-03 18:11:40] 2025-06-03 18:11:21,133 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 18:11:40] 2025-06-03 18:11:21,133 | INFO     | collected zombie processes
[2025-06-03 18:11:40] 2025-06-03 18:11:21,133 | INFO     | will attempt to kill all subprocesses of pid=326152
[2025-06-03 18:11:40] 2025-06-03 18:11:21,252 | INFO     | process IDs to be killed: [326152] (in reverse order)
[2025-06-03 18:11:40] 2025-06-03 18:11:21,310 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 18:11:40] 2025-06-03 18:11:21,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 18:11:40] 2025-06-03 18:11:21,315 | INFO     | did not find any defunct processes belonging to 326152
[2025-06-03 18:11:40] 2025-06-03 18:11:21,318 | INFO     | did not find any defunct processes belonging to 326152
[2025-06-03 18:11:40] 2025-06-03 18:11:21,319 | INFO     | ready for new job
[2025-06-03 18:11:40] 2025-06-03 18:11:21,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 18:11:40] 2025-06-03 18:11:21,323 | INFO     | **************************************
[2025-06-03 18:11:40] 2025-06-03 18:11:21,323 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 18:11:40] 2025-06-03 18:11:21,324 | INFO     | **************************************
[2025-06-03 18:11:40] 2025-06-03 18:11:21,324 | INFO     | 
[2025-06-03 18:11:40] 2025-06-03 18:11:21,325 | INFO     | pilot is running in a VM
[2025-06-03 18:11:40] 2025-06-03 18:11:21,325 | INFO     | architecture information:
[2025-06-03 18:11:40] 2025-06-03 18:11:21,327 | INFO     | executing command: cat /etc/os-release
[2025-06-03 18:11:40] 2025-06-03 18:11:21,344 | INFO     | cat /etc/os-release:
[2025-06-03 18:11:40] NAME="CentOS Linux"
[2025-06-03 18:11:40] VERSION="7 (Core)"
[2025-06-03 18:11:40] ID="centos"
[2025-06-03 18:11:40] ID_LIKE="rhel fedora"
[2025-06-03 18:11:40] VERSION_ID="7"
[2025-06-03 18:11:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 18:11:40] ANSI_COLOR="0;31"
[2025-06-03 18:11:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 18:11:40] HOME_URL="https://www.centos.org/"
[2025-06-03 18:11:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 18:11:40] 
[2025-06-03 18:11:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 18:11:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 18:11:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 18:11:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 18:11:40] 
[2025-06-03 18:11:40] 2025-06-03 18:11:21,344 | INFO     | **************************************
[2025-06-03 18:11:40] 2025-06-03 18:11:21,848 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-03 18:11:40] 2025-06-03 18:11:21,875 | INFO     | sufficient remaining disk space (30852251648 B)
[2025-06-03 18:11:40] 2025-06-03 18:11:21,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 18:11:40] 2025-06-03 18:11:21,877 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 18:11:40] 2025-06-03 18:11:21,877 | INFO     | update_server=False
[2025-06-03 18:11:40] 2025-06-03 18:11:21,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 18:11:40] 2025-06-03 18:11:21,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 18:11:40] 2025-06-03 18:11:21,880 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 18:11:40] 2025-06-03 18:11:21,881 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 18:11:40] 2025-06-03 18:11:21,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:11:40] 2025-06-03 18:11:21,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 18:11:40] 2025-06-03 18:11:21,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 18:11:40] 2025-06-03 18:11:21,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 18:11:40] 2025-06-03 18:11:22,136 | INFO     | all payload control threads have been joined
[2025-06-03 18:11:40] 2025-06-03 18:11:22,583 | INFO     | all data control threads have been joined
[2025-06-03 18:11:40] 2025-06-03 18:11:22,688 | INFO     | all job control threads have been joined
[2025-06-03 18:11:40] 2025-06-03 18:11:22,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 18:11:40] 2025-06-03 18:11:22,830 | INFO     | aborting loop
[2025-06-03 18:11:40] 2025-06-03 18:11:22,884 | INFO     | [job] retrieve thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:22,888 | INFO     | [job] queue monitor thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:22,926 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,142 | INFO     | [payload] control thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,241 | INFO     | [data] copytool_in thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,291 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,369 | INFO     | [payload] failed_post thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,494 | INFO     | [payload] validate_post thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,589 | INFO     | [data] control thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,694 | INFO     | [job] control thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,835 | INFO     | [job] job monitor thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,924 | INFO     | [data] copytool_out thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,989 | INFO     | [job] validate thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:23,995 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:25,885 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:32,572 | INFO     | job.realtimelogging is not enabled
[2025-06-03 18:11:40] 2025-06-03 18:11:33,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 18:11:40] 2025-06-03 18:11:35,247 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333076313920)>', '<ExcThread(monitor, started 140332310177536)>']
[2025-06-03 18:11:40] 2025-06-03 18:11:35,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 18:11:40] 2025-06-03 18:11:35,956 | INFO     | [monitor] control thread has ended
[2025-06-03 18:11:40] 2025-06-03 18:11:40,263 | INFO     | all workflow threads have been joined
[2025-06-03 18:11:40] 2025-06-03 18:11:40,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 18:11:40] 2025-06-03 18:11:40,264 | INFO     | traces error code: 0
[2025-06-03 18:11:40] 2025-06-03 18:11:40,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 18:11:40] 2025-06-03 18:11:40,407 [wrapper] ==== pilot stdout END ====
[2025-06-03 18:11:40] 2025-06-03 18:11:40,413 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 18:11:40] 2025-06-03 18:11:40,418 [wrapper] pilotpid: 319620
[2025-06-03 18:11:40] 2025-06-03 18:11:40,424 [wrapper] Pilot exit status: 0
[2025-06-03 18:11:40] 2025-06-03 18:11:40,445 [wrapper] pandaids: 6677572225
[2025-06-03 18:11:40] 2025-06-03 18:11:40,502 [wrapper] cleanup supervisor_pilot  337716 319621
[2025-06-03 18:11:40] 2025-06-03 18:11:40,508 [wrapper] Test setup, not cleaning
[2025-06-03 18:11:40] 2025-06-03 18:11:40,515 [wrapper] apfmon messages muted
[2025-06-03 18:11:40] 2025-06-03 18:11:40,520 [wrapper] ==== wrapper stdout END ====
[2025-06-03 18:11:40] 2025-06-03 18:11:40,527 [wrapper] ==== wrapper stderr END ====
[2025-06-03 18:11:40]  *** Error codes and diagnostics ***
[2025-06-03 18:11:40]     "exeErrorCode": 0,
[2025-06-03 18:11:40]     "exeErrorDiag": "",
[2025-06-03 18:11:40]     "pilotErrorCode": 0,
[2025-06-03 18:11:40]     "pilotErrorDiag": "",
[2025-06-03 18:11:40]  *** Listing of results directory ***
[2025-06-03 18:11:40] total 386836
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc    495897 Jun  3 09:56 pilot3.tar.gz
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc      5111 Jun  3 10:07 queuedata.json
[2025-06-03 18:11:40] -rwx------ 1 boinc boinc     37140 Jun  3 10:09 runpilot2-wrapper.sh
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc       100 Jun  3 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 18:11:40] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 16:31 run_atlas
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc       105 Jun  3 16:31 job.xml
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc      6318 Jun  3 16:31 init_data.xml
[2025-06-03 18:11:40] -rw-r--r-- 2 boinc boinc 214609714 Jun  3 16:31 EVNT.45006593._001135.pool.root.1
[2025-06-03 18:11:40] -rw-r--r-- 2 boinc boinc     15093 Jun  3 16:31 start_atlas.sh
[2025-06-03 18:11:40] drwxrwx--x 2 boinc boinc      4096 Jun  3 16:31 shared
[2025-06-03 18:11:40] -rw-r--r-- 2 boinc boinc    508881 Jun  3 16:31 input.tar.gz
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc         0 Jun  3 16:31 boinc_lockfile
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc      2525 Jun  3 16:31 pandaJob.out
[2025-06-03 18:11:40] -rw------- 1 boinc boinc    983734 Jun  3 16:32 agis_schedconf.cvmfs.json
[2025-06-03 18:11:40] -rw------- 1 boinc boinc   1603667 Jun  3 16:32 agis_ddmendpoints.agis.ALL.json
[2025-06-03 18:11:40] drwx------ 4 boinc boinc      4096 Jun  3 16:32 pilot3
[2025-06-03 18:11:40] -rw------- 1 boinc boinc 175954984 Jun  3 18:10 HITS.45006595._028383.pool.root.1
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc       529 Jun  3 18:10 boinc_task_state.xml
[2025-06-03 18:11:40] -rw------- 1 boinc boinc      1017 Jun  3 18:11 memory_monitor_summary.json
[2025-06-03 18:11:40] -rw------- 1 boinc boinc    309162 Jun  3 18:11 log.45006595._028383.job.log.tgz.1
[2025-06-03 18:11:40] -rw------- 1 boinc boinc      7677 Jun  3 18:11 heartbeat.json
[2025-06-03 18:11:40] -rw------- 1 boinc boinc        95 Jun  3 18:11 pilot_heartbeat.json
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc      8192 Jun  3 18:11 boinc_mmap_file
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc        27 Jun  3 18:11 wrapper_checkpoint.txt
[2025-06-03 18:11:40] -rw------- 1 boinc boinc      4610 Jun  3 18:11 pilotlog.txt
[2025-06-03 18:11:40] -rw------- 1 boinc boinc    548972 Jun  3 18:11 log.45006595._028383.job.log.1
[2025-06-03 18:11:40] -rw------- 1 boinc boinc       357 Jun  3 18:11 output.list
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc       620 Jun  3 18:11 runtime_log
[2025-06-03 18:11:40] -rw------- 1 boinc boinc    880640 Jun  3 18:11 result.tar.gz
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc      8695 Jun  3 18:11 runtime_log.err
[2025-06-03 18:11:40] -rw------- 1 boinc boinc       651 Jun  3 18:11 YAwKDmDldg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLOjKDmWfmkZm.diag
[2025-06-03 18:11:40] -rw-r--r-- 1 boinc boinc     21970 Jun  3 18:11 stderr.txt
[2025-06-03 18:11:40] HITS file was successfully produced:
[2025-06-03 18:11:40] -rw------- 1 boinc boinc 175954984 Jun  3 18:10 shared/HITS.pool.root.1
[2025-06-03 18:11:40]  *** Contents of shared directory: ***
[2025-06-03 18:11:40] total 382796
[2025-06-03 18:11:40] -rw-r--r-- 2 boinc boinc 214609714 Jun  3 16:31 ATLAS.root_0
[2025-06-03 18:11:40] -rw-r--r-- 2 boinc boinc     15093 Jun  3 16:31 start_atlas.sh
[2025-06-03 18:11:40] -rw-r--r-- 2 boinc boinc    508881 Jun  3 16:31 input.tar.gz
[2025-06-03 18:11:40] -rw------- 1 boinc boinc 175954984 Jun  3 18:10 HITS.pool.root.1
[2025-06-03 18:11:40] -rw------- 1 boinc boinc    880640 Jun  3 18:11 result.tar.gz
18:11:42 (315944): run_atlas exited; CPU time 43422.136365
18:11:42 (315944): called boinc_finish(0)

</stderr_txt>
]]>

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